BLASTX nr result
ID: Astragalus22_contig00030745
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Astragalus22_contig00030745 (1192 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_009242998.1| Ycf1 (chloroplast) [Astragalus mongholicus] ... 420 0.0 ref|YP_009175804.1| hypothetical chloroplast RF1 (chloroplast) [... 420 0.0 ref|YP_009429930.1| hypothetical chloroplast RF1 (plastid) [Carm... 337 e-165 ref|YP_009334234.1| hypothetical chloroplast RF1 (chloroplast) [... 293 e-147 ref|YP_009389898.1| hypothetical chloroplast RF1 (chloroplast) [... 268 e-137 gb|AOO96187.1| Ycf1 (chloroplast) [Glycyrrhiza uralensis] 252 e-128 gb|AOV83520.1| Ycf1 (chloroplast) [Glycyrrhiza glabra] 252 e-127 ref|YP_009027317.1| hypothetical chloroplast RF19 (chloroplast) ... 252 e-127 gb|ANS57949.1| hypothetical chloroplast RF19 (chloroplast) [Medi... 242 e-126 ref|YP_009141729.1| hypothetical chloroplast RF19 (chloroplast) ... 241 e-126 ref|YP_009141654.1| hypothetical chloroplast RF19 (chloroplast) ... 241 e-126 gb|AFR60081.1| hypothetical chloroplast RF1 (plastid) [Medicago ... 242 e-125 gb|AFR60005.1| hypothetical chloroplast RF1 (plastid) [Medicago ... 239 e-124 ref|YP_001381682.1| hypothetical chloroplast RF1 (chloroplast) [... 239 e-124 ref|XP_003604157.2| membrane protein Ycf1, putative [Medicago tr... 239 e-124 gb|AGV52559.1| hypothetical chloroplast RF1 (chloroplast) [Medic... 243 e-123 ref|YP_009437936.1| hypothetical chloroplast RF19 (chloroplast) ... 241 e-121 gb|AGS43959.1| hypothetical chloroplast RF19 (plastid) [Vicia faba] 233 e-115 ref|YP_009109892.1| hypothetical chloroplast RF19 (chloroplast) ... 227 e-111 ref|YP_009109967.1| hypothetical chloroplast RF19 (chloroplast) ... 225 e-109 >ref|YP_009242998.1| Ycf1 (chloroplast) [Astragalus mongholicus] gb|AMQ99273.1| Ycf1 (chloroplast) [Astragalus mongholicus] Length = 1736 Score = 420 bits (1080), Expect(2) = 0.0 Identities = 208/213 (97%), Positives = 208/213 (97%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS Sbjct: 416 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 475 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE Sbjct: 476 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 535 Query: 281 EXXXXXKFLLDVIESDLDHQKIHEISKTVPIWSYSLIDELEELTEAVSQEPQIRCRYAQR 102 E KFLLDVIESDLDHQKIHEISKTVPIWSYSLIDELEELTEAVSQEPQIRCRYAQR Sbjct: 536 EKKRKKKFLLDVIESDLDHQKIHEISKTVPIWSYSLIDELEELTEAVSQEPQIRCRYAQR 595 Query: 101 IVIFNDKTENYTQDIRPINISNTDDYEDSDFSD 3 IVIFNDKTENYTQDIRPINISNTDDYEDSDFSD Sbjct: 596 IVIFNDKTENYTQDIRPINISNTDDYEDSDFSD 628 Score = 336 bits (862), Expect(2) = 0.0 Identities = 166/184 (90%), Positives = 166/184 (90%) Frame = -1 Query: 1192 HYLGRIPAPYFLDDGLXXXXXXXXXXXXXXXXXXEMEEDLSHYLFAKKDNTFNTIQKEEN 1013 HYLGRIPAPYFLDDGL EMEEDLSHYLFAKKDNTFNTIQKEEN Sbjct: 231 HYLGRIPAPYFLDDGLIETEENDEIGEIDGERDSEMEEDLSHYLFAKKDNTFNTIQKEEN 290 Query: 1012 LNLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSDGKERISFTYPPN 833 LNLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSDGKERISFTYPPN Sbjct: 291 LNLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSDGKERISFTYPPN 350 Query: 832 LSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRAKVLDKQSLPMDV 653 LSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRAKVLDKQSLPMDV Sbjct: 351 LSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRAKVLDKQSLPMDV 410 Query: 652 LENR 641 LENR Sbjct: 411 LENR 414 >ref|YP_009175804.1| hypothetical chloroplast RF1 (chloroplast) [Astragalus mongholicus var. nakaianus] gb|ALH42735.1| hypothetical chloroplast RF1 (chloroplast) [Astragalus mongholicus var. nakaianus] gb|ANK78970.1| Ycf1 (chloroplast) [Astragalus membranaceus var. membranaceus] Length = 1736 Score = 420 bits (1080), Expect(2) = 0.0 Identities = 208/213 (97%), Positives = 208/213 (97%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS Sbjct: 416 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 475 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE Sbjct: 476 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 535 Query: 281 EXXXXXKFLLDVIESDLDHQKIHEISKTVPIWSYSLIDELEELTEAVSQEPQIRCRYAQR 102 E KFLLDVIESDLDHQKIHEISKTVPIWSYSLIDELEELTEAVSQEPQIRCRYAQR Sbjct: 536 EKKRKKKFLLDVIESDLDHQKIHEISKTVPIWSYSLIDELEELTEAVSQEPQIRCRYAQR 595 Query: 101 IVIFNDKTENYTQDIRPINISNTDDYEDSDFSD 3 IVIFNDKTENYTQDIRPINISNTDDYEDSDFSD Sbjct: 596 IVIFNDKTENYTQDIRPINISNTDDYEDSDFSD 628 Score = 336 bits (862), Expect(2) = 0.0 Identities = 166/184 (90%), Positives = 166/184 (90%) Frame = -1 Query: 1192 HYLGRIPAPYFLDDGLXXXXXXXXXXXXXXXXXXEMEEDLSHYLFAKKDNTFNTIQKEEN 1013 HYLGRIPAPYFLDDGL EMEEDLSHYLFAKKDNTFNTIQKEEN Sbjct: 231 HYLGRIPAPYFLDDGLIETEENDEIGEIDGERDSEMEEDLSHYLFAKKDNTFNTIQKEEN 290 Query: 1012 LNLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSDGKERISFTYPPN 833 LNLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSDGKERISFTYPPN Sbjct: 291 LNLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSDGKERISFTYPPN 350 Query: 832 LSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRAKVLDKQSLPMDV 653 LSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRAKVLDKQSLPMDV Sbjct: 351 LSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRAKVLDKQSLPMDV 410 Query: 652 LENR 641 LENR Sbjct: 411 LENR 414 >ref|YP_009429930.1| hypothetical chloroplast RF1 (plastid) [Carmichaelia australis] gb|ASY01261.1| hypothetical chloroplast RF1 (plastid) [Carmichaelia australis] Length = 1722 Score = 337 bits (864), Expect(2) = e-165 Identities = 168/213 (78%), Positives = 185/213 (86%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RLC+D+ KRKYLT+IYDPFLNGCFRGQ+ SFS SI+NE Y T SILINKIHGILLSINS Sbjct: 419 RLCNDETKRKYLTKIYDPFLNGCFRGQIQKSFSSSIQNETYTTNSILINKIHGILLSINS 478 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 +YPDPE EQKINPFDRKSLLNEIGFFFNLISKFSEKSVSS NFDRLYLFPEHEQVKIYSE Sbjct: 479 NYPDPELEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSFNFDRLYLFPEHEQVKIYSE 538 Query: 281 EXXXXXKFLLDVIESDLDHQKIHEISKTVPIWSYSLIDELEELTEAVSQEPQIRCRYAQR 102 E KFLLD I++DL+ Q I EISK VP WS SLIDELEELTE VSQE QIRCR AQR Sbjct: 539 EKKRKKKFLLDAIQTDLNDQTIKEISKQVPRWSSSLIDELEELTEPVSQESQIRCRNAQR 598 Query: 101 IVIFNDKTENYTQDIRPINISNTDDYEDSDFSD 3 IVIFN KTENY ++I+PI++ NTDDYED+++ D Sbjct: 599 IVIFNGKTENYNEEIQPIDMYNTDDYEDNEYLD 631 Score = 275 bits (702), Expect(2) = e-165 Identities = 145/189 (76%), Positives = 151/189 (79%), Gaps = 5/189 (2%) Frame = -1 Query: 1192 HYLGRIPAPYFL-DDGLXXXXXXXXXXXXXXXXXXEMEE----DLSHYLFAKKDNTFNTI 1028 HYLGRIP PYFL DD + EMEE DLS YLF + TFN I Sbjct: 231 HYLGRIPIPYFLTDDEVIQTEENDEIGKIDGERDSEMEEAKEKDLSIYLFPLPEKTFNKI 290 Query: 1027 QKEENLNLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSDGKERISF 848 ++EEN + PLVTTLFDYQRWNRPLRYIKND FDNVVRNENSQFFFHICQSDGKERISF Sbjct: 291 EEEENP--EKPLVTTLFDYQRWNRPLRYIKNDQFDNVVRNENSQFFFHICQSDGKERISF 348 Query: 847 TYPPNLSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRAKVLDKQS 668 TYPPNLSTFLKIME+KMDLFTRDKIS NELSNYWSSTNKEKRKKLSNEFYKRAKVLDKQ Sbjct: 349 TYPPNLSTFLKIMEKKMDLFTRDKISSNELSNYWSSTNKEKRKKLSNEFYKRAKVLDKQF 408 Query: 667 LPMDVLENR 641 LPMDVLENR Sbjct: 409 LPMDVLENR 417 >ref|YP_009334234.1| hypothetical chloroplast RF1 (chloroplast) [Caragana microphylla] ref|YP_009389974.1| hypothetical chloroplast RF1 (chloroplast) [Caragana korshinskii] gb|APL97441.1| hypothetical chloroplast RF1 (chloroplast) [Caragana microphylla] gb|APL97517.1| hypothetical chloroplast RF1 (chloroplast) [Caragana korshinskii] Length = 1755 Score = 293 bits (751), Expect(2) = e-147 Identities = 152/222 (68%), Positives = 174/222 (78%), Gaps = 9/222 (4%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RLC D+ K KY++QIYDPFLNG FRGQ+ SFSPSI+NE Y T SILINKIHG+LL+INS Sbjct: 445 RLCKDETKTKYISQIYDPFLNGRFRGQIQTSFSPSIQNETYTTNSILINKIHGLLLAINS 504 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 HYP EFEQKI+PFDRKSLL EIGFFFN ISKFSEKSVSSLNFD LYLFPEHEQVKIYSE Sbjct: 505 HYP--EFEQKIDPFDRKSLLTEIGFFFNFISKFSEKSVSSLNFDGLYLFPEHEQVKIYSE 562 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL D I +DL+ + I+EISK VP WSY+LID+LE+LTE + +E Sbjct: 563 EKNRKKKFLFDSIRTDLNDETIFNRKKCIGINEISKKVPRWSYNLIDDLEQLTEGLGKEA 622 Query: 128 QIRCRYAQRIVIFNDKTENYTQDIRPINISNTDDYEDSDFSD 3 QIRCR A RIVIFN KTENY +D+ ++I NTDD EDS S+ Sbjct: 623 QIRCRKADRIVIFNSKTENYNEDLNTMSIYNTDDNEDSHTSN 664 Score = 257 bits (657), Expect(2) = e-147 Identities = 131/203 (64%), Positives = 146/203 (71%), Gaps = 19/203 (9%) Frame = -1 Query: 1192 HYLGRIPAPYFLDD-----------GLXXXXXXXXXXXXXXXXXXEMEEDLSHYLFAKKD 1046 HYLGRIP P+F D G +EEDLS Y F+ D Sbjct: 241 HYLGRIPLPHFFTDEMLEIEENNEIGEMDVEGDSETDETKQEHKRFIEEDLSSYFFSPND 300 Query: 1045 NTFNTIQKEEN--------LNLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFF 890 T + I++EE Q PLVT LFD+QRWNRPLRYIKND+F+NVVRNENSQFF Sbjct: 301 KTLDKIEEEEEKDEEEKDLFGFQKPLVTILFDFQRWNRPLRYIKNDHFENVVRNENSQFF 360 Query: 889 FHICQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLS 710 FHICQSDGKERISFTYPP+LSTFLKIME+KMDLFTRDKISYNELSNYWSSTNKEKRKKLS Sbjct: 361 FHICQSDGKERISFTYPPDLSTFLKIMEKKMDLFTRDKISYNELSNYWSSTNKEKRKKLS 420 Query: 709 NEFYKRAKVLDKQSLPMDVLENR 641 NEF+KRAKVLDK+ +P+DV ENR Sbjct: 421 NEFFKRAKVLDKEFIPLDVFENR 443 >ref|YP_009389898.1| hypothetical chloroplast RF1 (chloroplast) [Caragana kozlowii] gb|APL97339.1| hypothetical chloroplast RF1 (chloroplast) [Caragana kozlowii] Length = 1758 Score = 268 bits (686), Expect(2) = e-137 Identities = 145/231 (62%), Positives = 167/231 (72%), Gaps = 18/231 (7%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTK---------SILINKI 489 RLC D+ K KY++QIYDPFLNG FRGQ+ SFSPSI+NE Y T ILINKI Sbjct: 438 RLCKDETKTKYISQIYDPFLNGRFRGQIQTSFSPSIQNETYTTSIQNETYTTNHILINKI 497 Query: 488 HGILLSINSHYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPE 309 HG+LL+ DPEFEQKI+PFDRKSLL EIGFFFN ISKFSEKSVSSLNFD L LFPE Sbjct: 498 HGLLLA-----HDPEFEQKIDPFDRKSLLTEIGFFFNFISKFSEKSVSSLNFDGLSLFPE 552 Query: 308 HEQVKIYSEEXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEE 156 HEQVKIYSEE +FL D I +DL+ + I+EISK VP WSY+LID+LE+ Sbjct: 553 HEQVKIYSEEKKRKKRFLFDSIRTDLNDETIFNTKKCIGINEISKKVPRWSYNLIDDLEQ 612 Query: 155 LTEAVSQEPQIRCRYAQRIVIFNDKTENYTQDIRPINISNTDDYEDSDFSD 3 LTE +E QIRCR A RIVIFN KTENY +D+ ++ISNTDD ED S+ Sbjct: 613 LTEGPVKEAQIRCRKADRIVIFNSKTENYNEDLNTMSISNTDDNEDGHTSN 663 Score = 250 bits (639), Expect(2) = e-137 Identities = 128/198 (64%), Positives = 146/198 (73%), Gaps = 14/198 (7%) Frame = -1 Query: 1192 HYLGRIPAPYFLDDGLXXXXXXXXXXXXXXXXXXEME-------------EDLSHYLFAK 1052 HYLGRIP P+F + + ++E E LS F+ Sbjct: 239 HYLGRIPLPHFFTEEMLEIGENDEIGENEEVGDLDVERAWETPEQKGFVDEYLSSNFFSP 298 Query: 1051 KDNTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQ 875 D T + I++E +L Q PLVT LFD+QRWNRPLRYIKND+F+NVVRNENSQFFFHICQ Sbjct: 299 NDKTLDKIEEERDLFEFQKPLVTILFDFQRWNRPLRYIKNDHFENVVRNENSQFFFHICQ 358 Query: 874 SDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYK 695 SDGKERISFTYPP+LSTFLKIME+KMDLFTRDKISY ELSNYWSSTNKEKRKKLSNEF+K Sbjct: 359 SDGKERISFTYPPDLSTFLKIMEKKMDLFTRDKISYKELSNYWSSTNKEKRKKLSNEFFK 418 Query: 694 RAKVLDKQSLPMDVLENR 641 RAKVLDK+SLP+DV ENR Sbjct: 419 RAKVLDKESLPLDVFENR 436 >gb|AOO96187.1| Ycf1 (chloroplast) [Glycyrrhiza uralensis] Length = 1779 Score = 252 bits (644), Expect(2) = e-128 Identities = 131/196 (66%), Positives = 143/196 (72%), Gaps = 12/196 (6%) Frame = -1 Query: 1192 HYLGRIPAPYFLDD-----------GLXXXXXXXXXXXXXXXXXXEMEEDLSHYLFAKKD 1046 +YLGR+P PYF G +EEDLS YLF+KKD Sbjct: 230 YYLGRLPLPYFFTQEMREIQEKSEIGKIDVERNSETAGTKQEQKRYIEEDLSPYLFSKKD 289 Query: 1045 NTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSD 869 + I+KE +L Q PLVT LFDYQRW RPLRYIKND F+NVVRNENSQFFFHICQSD Sbjct: 290 KNLDKIEKENDLLGFQKPLVTILFDYQRWIRPLRYIKNDRFENVVRNENSQFFFHICQSD 349 Query: 868 GKERISFTYPPNLSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRA 689 GKERISFTYPPNLSTFLKIME+KMDLFTRDKISYNELSN WSSTNKEK KKLSNEF+KRA Sbjct: 350 GKERISFTYPPNLSTFLKIMEKKMDLFTRDKISYNELSNSWSSTNKEKIKKLSNEFFKRA 409 Query: 688 KVLDKQSLPMDVLENR 641 KVLDK+ P+DV ENR Sbjct: 410 KVLDKEFRPLDVFENR 425 Score = 236 bits (601), Expect(2) = e-128 Identities = 129/213 (60%), Positives = 150/213 (70%), Gaps = 9/213 (4%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RLC+D K KYLT+IYDPFLNG FRGQ+ FSPSI++E Y T LINKIHGILL +S Sbjct: 427 RLCNDDTKTKYLTKIYDPFLNGRFRGQIQKCFSPSIKDETYTTNYTLINKIHGILLYTHS 486 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 +Y EFEQKI+PFDRKSLL EIGFFFNLISKFSEKSVSSLNFD LYLFPEHEQVK+Y E Sbjct: 487 NYQ--EFEQKIDPFDRKSLLTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEHEQVKMYFE 544 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL D I +DL+ Q I+EISK VP WSY+LIDELE+L ++ Sbjct: 545 EKKRKKKFLFDAIRTDLNDQTILNRKKSIGINEISKKVPRWSYNLIDELEQLMARTAKNA 604 Query: 128 QIRCRYAQRIVIFNDKTENYTQDIRPINISNTD 30 QIR R A+ + F +E + RP I NT+ Sbjct: 605 QIRSREAEPRIFFTTDSEYENEGSRPSIIENTE 637 >gb|AOV83520.1| Ycf1 (chloroplast) [Glycyrrhiza glabra] Length = 1779 Score = 252 bits (644), Expect(2) = e-127 Identities = 131/196 (66%), Positives = 143/196 (72%), Gaps = 12/196 (6%) Frame = -1 Query: 1192 HYLGRIPAPYFLDD-----------GLXXXXXXXXXXXXXXXXXXEMEEDLSHYLFAKKD 1046 +YLGR+P PYF G +EEDLS YLF+KKD Sbjct: 230 YYLGRLPLPYFFTQEMREIQEKSEIGKIDVERNSETAGTKQEQKRYIEEDLSPYLFSKKD 289 Query: 1045 NTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSD 869 + I+KE +L Q PLVT LFDYQRW RPLRYIKND F+NVVRNENSQFFFHICQSD Sbjct: 290 KNLDKIEKENDLLGFQKPLVTILFDYQRWIRPLRYIKNDRFENVVRNENSQFFFHICQSD 349 Query: 868 GKERISFTYPPNLSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRA 689 GKERISFTYPPNLSTFLKIME+KMDLFTRDKISYNELSN WSSTNKEK KKLSNEF+KRA Sbjct: 350 GKERISFTYPPNLSTFLKIMEKKMDLFTRDKISYNELSNSWSSTNKEKIKKLSNEFFKRA 409 Query: 688 KVLDKQSLPMDVLENR 641 KVLDK+ P+DV ENR Sbjct: 410 KVLDKEFRPLDVFENR 425 Score = 232 bits (591), Expect(2) = e-127 Identities = 128/213 (60%), Positives = 149/213 (69%), Gaps = 9/213 (4%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RLC+D K KYLT+IYDPFLNG FRGQ+ FSPSI++E Y T LINKIHGILL +S Sbjct: 427 RLCNDDTKTKYLTKIYDPFLNGRFRGQIQKCFSPSIKDETYTTNYTLINKIHGILLYTHS 486 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 +Y EFEQKI+PFDRKSLL EIGFFFNLISKFSEKSVSSLNFD LYLFPEHEQVK+ E Sbjct: 487 NYQ--EFEQKIDPFDRKSLLTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEHEQVKMDFE 544 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL D I +DL+ Q I+EISK VP WSY+LIDELE+L ++ Sbjct: 545 EKKRKKKFLFDAIRTDLNDQTIFNRKKSIGINEISKKVPRWSYNLIDELEQLMARTAKNA 604 Query: 128 QIRCRYAQRIVIFNDKTENYTQDIRPINISNTD 30 QIR R A+ + F +E + RP I NT+ Sbjct: 605 QIRSREAEPRIFFTTDSEYENEGSRPSIIENTE 637 >ref|YP_009027317.1| hypothetical chloroplast RF19 (chloroplast) [Glycyrrhiza glabra] ref|YP_009352086.1| Ycf1 (chloroplast) [Glycyrrhiza lepidota] gb|AGU00114.1| hypothetical chloroplast RF19 (chloroplast) [Glycyrrhiza glabra] gb|AOO96111.1| Ycf1 (chloroplast) [Glycyrrhiza glabra x Glycyrrrhiza uralensis] gb|AQW41812.1| Ycf1 (chloroplast) [Glycyrrhiza lepidota] Length = 1779 Score = 252 bits (644), Expect(2) = e-127 Identities = 131/196 (66%), Positives = 143/196 (72%), Gaps = 12/196 (6%) Frame = -1 Query: 1192 HYLGRIPAPYFLDD-----------GLXXXXXXXXXXXXXXXXXXEMEEDLSHYLFAKKD 1046 +YLGR+P PYF G +EEDLS YLF+KKD Sbjct: 230 YYLGRLPLPYFFTQEMREIQEKSEIGKIDVERNSETAGTKQEQKRYIEEDLSPYLFSKKD 289 Query: 1045 NTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSD 869 + I+KE +L Q PLVT LFDYQRW RPLRYIKND F+NVVRNENSQFFFHICQSD Sbjct: 290 KNLDKIEKENDLLGFQKPLVTILFDYQRWIRPLRYIKNDRFENVVRNENSQFFFHICQSD 349 Query: 868 GKERISFTYPPNLSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRA 689 GKERISFTYPPNLSTFLKIME+KMDLFTRDKISYNELSN WSSTNKEK KKLSNEF+KRA Sbjct: 350 GKERISFTYPPNLSTFLKIMEKKMDLFTRDKISYNELSNSWSSTNKEKIKKLSNEFFKRA 409 Query: 688 KVLDKQSLPMDVLENR 641 KVLDK+ P+DV ENR Sbjct: 410 KVLDKEFRPLDVFENR 425 Score = 232 bits (591), Expect(2) = e-127 Identities = 128/213 (60%), Positives = 149/213 (69%), Gaps = 9/213 (4%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RLC+D K KYLT+IYDPFLNG FRGQ+ FSPSI++E Y T LINKIHGILL +S Sbjct: 427 RLCNDDTKTKYLTKIYDPFLNGRFRGQIQKCFSPSIKDETYTTNYTLINKIHGILLYTHS 486 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 +Y EFEQKI+PFDRKSLL EIGFFFNLISKFSEKSVSSLNFD LYLFPEHEQVK+ E Sbjct: 487 NYQ--EFEQKIDPFDRKSLLTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEHEQVKMDFE 544 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL D I +DL+ Q I+EISK VP WSY+LIDELE+L ++ Sbjct: 545 EKKRKKKFLFDAIRTDLNDQTIFNRKKSIGINEISKKVPRWSYNLIDELEQLMARTAKNA 604 Query: 128 QIRCRYAQRIVIFNDKTENYTQDIRPINISNTD 30 QIR R A+ + F +E + RP I NT+ Sbjct: 605 QIRSREAEPRIFFTTDSEYENEGSRPSIIENTE 637 >gb|ANS57949.1| hypothetical chloroplast RF19 (chloroplast) [Medicago sativa] Length = 1748 Score = 242 bits (617), Expect(2) = e-126 Identities = 134/210 (63%), Positives = 160/210 (76%), Gaps = 11/210 (5%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL +D++K KYLT+IYDPFLNG FRGQ SFSPSI+NE Y T SILINKIHG+LLSINS Sbjct: 457 RLSNDKRKIKYLTKIYDPFLNGPFRGQ---SFSPSIQNETYTTNSILINKIHGLLLSINS 513 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 +YP EFEQKI+ FDRK LL EIGFFFNLIS+FSEKSVSS NFD LYLFPEHEQVKIYSE Sbjct: 514 NYP--EFEQKIDQFDRKFLLTEIGFFFNLISQFSEKSVSSFNFDGLYLFPEHEQVKIYSE 571 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL + I +D ++Q I+EISK VP WSY+LIDE+E+ TE + +EP Sbjct: 572 EKKRKKKFLFEAIRTDRNNQTIFNRKKCSGINEISKQVPRWSYNLIDEVEQATERLIKEP 631 Query: 128 QIRCRYAQRIVIFNDKTENYT--QDIRPIN 45 QIR A+RIVIF+ T++ + ++RP N Sbjct: 632 QIRSPRAERIVIFDGNTDSLSLNLNLRPRN 661 Score = 239 bits (611), Expect(2) = e-126 Identities = 128/209 (61%), Positives = 146/209 (69%), Gaps = 25/209 (11%) Frame = -1 Query: 1192 HYLGRIPAPYFLDDGLXXXXXXXXXXXXXXXXXXEM----------------EEDLSHYL 1061 HYLGR P PYF D + EE+L YL Sbjct: 247 HYLGRTPLPYFYTDEILEYEEKEKDEINGEIDVEIDSETEETKQEQNGSIEDEENLISYL 306 Query: 1060 FAKKDNTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFH 884 F KKD T + I+++ N+ L+ PLVTTLFDYQRWNRPLRYIKND+F+ VVR+ENSQFFFH Sbjct: 307 FPKKDKTLDNIEQDNNIFALEKPLVTTLFDYQRWNRPLRYIKNDHFERVVRDENSQFFFH 366 Query: 883 ICQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISY--NELSNYWSSTNKEKRKKLS 710 ICQSDGKERISFTYPP+LS+FLKIME+KMDLFTRDKISY NELSNYWSS NKEKRKKLS Sbjct: 367 ICQSDGKERISFTYPPDLSSFLKIMEKKMDLFTRDKISYNDNELSNYWSSNNKEKRKKLS 426 Query: 709 NEFYKRAKVLDKQ------SLPMDVLENR 641 NEF+KRAKVLDK+ +P+DV ENR Sbjct: 427 NEFFKRAKVLDKKYKKYKNFIPVDVFENR 455 >ref|YP_009141729.1| hypothetical chloroplast RF19 (chloroplast) [Medicago papillosa] gb|AIL56254.1| hypothetical chloroplast RF19 (chloroplast) [Medicago papillosa] Length = 1758 Score = 241 bits (615), Expect(2) = e-126 Identities = 134/210 (63%), Positives = 160/210 (76%), Gaps = 11/210 (5%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL +D++K KYLT+IYDPFLNG FRGQ SFSPSI+NE Y T SILINKIHG+LLSINS Sbjct: 456 RLSNDKRKIKYLTKIYDPFLNGPFRGQ---SFSPSIQNETYTTNSILINKIHGLLLSINS 512 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 +YP EFEQKI+ FDRK LL EIGFFFNLIS+FSEKSVSS NFD LYLFPEHEQVKIYSE Sbjct: 513 NYP--EFEQKIDQFDRKFLLTEIGFFFNLISQFSEKSVSSFNFDGLYLFPEHEQVKIYSE 570 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL + I +D ++ I+EISK VP WSY+LIDELE++TE + +EP Sbjct: 571 EKKRKKKFLFEAIRTDRNNHTIFNRKKCSGINEISKQVPRWSYNLIDELEQVTERLIKEP 630 Query: 128 QIRCRYAQRIVIFNDKTENYT--QDIRPIN 45 QIR A+RIVIF+ T++ + ++RP N Sbjct: 631 QIRNPRAERIVIFDGNTDSLSLNLNLRPRN 660 Score = 239 bits (611), Expect(2) = e-126 Identities = 128/209 (61%), Positives = 146/209 (69%), Gaps = 25/209 (11%) Frame = -1 Query: 1192 HYLGRIPAPYFLDDGLXXXXXXXXXXXXXXXXXXEM----------------EEDLSHYL 1061 HYLGR P PYF D + EE+L YL Sbjct: 246 HYLGRTPLPYFYTDEILEYEEKEKDEINGEIDVEIDSETEETKQEQNGSIEDEENLISYL 305 Query: 1060 FAKKDNTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFH 884 F KKD T + I+++ N+ L+ PLVTTLFDYQRWNRPLRYIKND+F+ VVR+ENSQFFFH Sbjct: 306 FPKKDKTLDNIEQDNNIFALEKPLVTTLFDYQRWNRPLRYIKNDHFERVVRDENSQFFFH 365 Query: 883 ICQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISY--NELSNYWSSTNKEKRKKLS 710 ICQSDGKERISFTYPP+LS+FLKIME+KMDLFTRDKISY NELSNYWSS NKEKRKKLS Sbjct: 366 ICQSDGKERISFTYPPDLSSFLKIMEKKMDLFTRDKISYNDNELSNYWSSNNKEKRKKLS 425 Query: 709 NEFYKRAKVLDKQ------SLPMDVLENR 641 NEF+KRAKVLDK+ +P+DV ENR Sbjct: 426 NEFFKRAKVLDKKYKKYKNFIPVDVFENR 454 >ref|YP_009141654.1| hypothetical chloroplast RF19 (chloroplast) [Medicago hybrida] gb|AIL56179.1| hypothetical chloroplast RF19 (chloroplast) [Medicago hybrida] Length = 1752 Score = 241 bits (615), Expect(2) = e-126 Identities = 134/210 (63%), Positives = 160/210 (76%), Gaps = 11/210 (5%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL +D++K KYLT+IYDPFLNG FRGQ SFSPSI+NE Y T SILINKIHG+LLSINS Sbjct: 456 RLSNDKRKIKYLTKIYDPFLNGPFRGQ---SFSPSIQNETYTTNSILINKIHGLLLSINS 512 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 +YP EFEQKI+ FDRK LL EIGFFFNLIS+FSEKSVSS NFD LYLFPEHEQVKIYSE Sbjct: 513 NYP--EFEQKIDQFDRKFLLTEIGFFFNLISQFSEKSVSSFNFDGLYLFPEHEQVKIYSE 570 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL + I +D ++ I+EISK VP WSY+LIDELE++TE + +EP Sbjct: 571 EKKRKKKFLFEAIRTDRNNHTIFNRKKCSGINEISKQVPRWSYNLIDELEQVTERLIKEP 630 Query: 128 QIRCRYAQRIVIFNDKTENYT--QDIRPIN 45 QIR A+RIVIF+ T++ + ++RP N Sbjct: 631 QIRNPRAERIVIFDGNTDSLSLNLNLRPRN 660 Score = 239 bits (611), Expect(2) = e-126 Identities = 128/209 (61%), Positives = 146/209 (69%), Gaps = 25/209 (11%) Frame = -1 Query: 1192 HYLGRIPAPYFLDDGLXXXXXXXXXXXXXXXXXXEM----------------EEDLSHYL 1061 HYLGR P PYF D + EE+L YL Sbjct: 246 HYLGRTPLPYFYTDEILEYEEKEKDEINGEIDVEIDSETEETKQEQNGSIEDEENLISYL 305 Query: 1060 FAKKDNTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFH 884 F KKD T + I+++ N+ L+ PLVTTLFDYQRWNRPLRYIKND+F+ VVR+ENSQFFFH Sbjct: 306 FPKKDKTLDNIEQDNNIFALEKPLVTTLFDYQRWNRPLRYIKNDHFERVVRDENSQFFFH 365 Query: 883 ICQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISY--NELSNYWSSTNKEKRKKLS 710 ICQSDGKERISFTYPP+LS+FLKIME+KMDLFTRDKISY NELSNYWSS NKEKRKKLS Sbjct: 366 ICQSDGKERISFTYPPDLSSFLKIMEKKMDLFTRDKISYNDNELSNYWSSNNKEKRKKLS 425 Query: 709 NEFYKRAKVLDKQ------SLPMDVLENR 641 NEF+KRAKVLDK+ +P+DV ENR Sbjct: 426 NEFFKRAKVLDKKYKKYKNFIPVDVFENR 454 >gb|AFR60081.1| hypothetical chloroplast RF1 (plastid) [Medicago truncatula] Length = 1756 Score = 242 bits (618), Expect(2) = e-125 Identities = 135/214 (63%), Positives = 160/214 (74%), Gaps = 15/214 (7%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL +D++K KYLT+IYDPFLNG FRGQ SFSPSI+NE Y T SILINKIHG+LL INS Sbjct: 452 RLSNDKRKIKYLTKIYDPFLNGPFRGQ---SFSPSIQNETYTTNSILINKIHGLLL-INS 507 Query: 461 HYPD------PEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQ 300 +YP+ PEFEQKI+ FDRK LL EIGFFFNLIS+FSEKSVSS NFD LYLFPEHEQ Sbjct: 508 NYPEFDNSNYPEFEQKIDQFDRKFLLTEIGFFFNLISQFSEKSVSSFNFDGLYLFPEHEQ 567 Query: 299 VKIYSEEXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTE 147 VKIYSEE KFL + I +D ++Q I+EISK VP WSY LIDELE++TE Sbjct: 568 VKIYSEEKKRKKKFLFEAIRTDQNNQTIFNRKKCTGINEISKQVPRWSYELIDELEQMTE 627 Query: 146 AVSQEPQIRCRYAQRIVIFNDKTENYTQDIRPIN 45 +++E QIR A+R+VIFN T++ T +I P N Sbjct: 628 RLTKEFQIRSAKAERMVIFNGNTDSLTLNIGPRN 661 Score = 235 bits (600), Expect(2) = e-125 Identities = 127/208 (61%), Positives = 148/208 (71%), Gaps = 24/208 (11%) Frame = -1 Query: 1192 HYLGRIPAPY---FLDDGLXXXXXXXXXXXXXXXXXXEM------------EEDLSHYLF 1058 HYLGR P PY + D+ L E+ EED+ YLF Sbjct: 243 HYLGRTPVPYLYTYTDEILEYDEKQKDEINGETEIDVEIDSEQEQNGSIEDEEDILSYLF 302 Query: 1057 AKKDNTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHI 881 KKD T I+++ NL L+ PLVTTLFDY++WNRPLRYIKND+F+ VVR+ENSQFFFHI Sbjct: 303 PKKDKTLENIEQDNNLLALEKPLVTTLFDYRKWNRPLRYIKNDHFERVVRDENSQFFFHI 362 Query: 880 CQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISY--NELSNYWSSTNKEKRKKLSN 707 CQSDGKERISFTYPP+LS+FLKIME+KMDLFT+DKISY NELSNYWSS NKEKRKKLSN Sbjct: 363 CQSDGKERISFTYPPDLSSFLKIMEKKMDLFTKDKISYNDNELSNYWSSNNKEKRKKLSN 422 Query: 706 EFYKRAKVLD------KQSLPMDVLENR 641 EF+KRAKVLD K+ +P+DV ENR Sbjct: 423 EFFKRAKVLDKKYKKYKKFIPVDVFENR 450 >gb|AFR60005.1| hypothetical chloroplast RF1 (plastid) [Medicago truncatula] Length = 1764 Score = 239 bits (610), Expect(2) = e-124 Identities = 135/222 (60%), Positives = 160/222 (72%), Gaps = 23/222 (10%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL +D++K KYLT+IYDPFLNG FRGQ SFSPSI+NE Y T SILINKIHG+LL INS Sbjct: 452 RLSNDKRKIKYLTKIYDPFLNGPFRGQ---SFSPSIQNETYTTNSILINKIHGLLL-INS 507 Query: 461 HYPD--------------PEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRL 324 +YP+ PEFEQKI+ FDRK LL EIGFFFNLIS+FSEKSVSS NFD L Sbjct: 508 NYPEFDNSNYPEFDNSNYPEFEQKIDQFDRKFLLTEIGFFFNLISQFSEKSVSSFNFDGL 567 Query: 323 YLFPEHEQVKIYSEEXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLI 171 YLFPEHEQVKIYSEE KFL + I +D ++Q I+EISK VP WSY LI Sbjct: 568 YLFPEHEQVKIYSEEKKRKKKFLFEAIRTDQNNQTIFNRKKCTGINEISKQVPRWSYELI 627 Query: 170 DELEELTEAVSQEPQIRCRYAQRIVIFNDKTENYTQDIRPIN 45 DELE++TE +++E QIR A+R+VIFN T++ T +I P N Sbjct: 628 DELEQMTERLTKEFQIRSAKAERMVIFNGNTDSLTLNIGPRN 669 Score = 235 bits (600), Expect(2) = e-124 Identities = 127/208 (61%), Positives = 148/208 (71%), Gaps = 24/208 (11%) Frame = -1 Query: 1192 HYLGRIPAPY---FLDDGLXXXXXXXXXXXXXXXXXXEM------------EEDLSHYLF 1058 HYLGR P PY + D+ L E+ EED+ YLF Sbjct: 243 HYLGRTPVPYLYTYTDEILEYDEKQKDEINGETEIDVEIDSEQEQNGSIEDEEDILSYLF 302 Query: 1057 AKKDNTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHI 881 KKD T I+++ NL L+ PLVTTLFDY++WNRPLRYIKND+F+ VVR+ENSQFFFHI Sbjct: 303 PKKDKTLENIEQDNNLLALEKPLVTTLFDYRKWNRPLRYIKNDHFERVVRDENSQFFFHI 362 Query: 880 CQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISY--NELSNYWSSTNKEKRKKLSN 707 CQSDGKERISFTYPP+LS+FLKIME+KMDLFT+DKISY NELSNYWSS NKEKRKKLSN Sbjct: 363 CQSDGKERISFTYPPDLSSFLKIMEKKMDLFTKDKISYNDNELSNYWSSNNKEKRKKLSN 422 Query: 706 EFYKRAKVLD------KQSLPMDVLENR 641 EF+KRAKVLD K+ +P+DV ENR Sbjct: 423 EFFKRAKVLDKKYKKYKKFIPVDVFENR 450 >ref|YP_001381682.1| hypothetical chloroplast RF1 (chloroplast) [Medicago truncatula] gb|AFR59929.1| hypothetical chloroplast RF1 (plastid) [Medicago truncatula] Length = 1760 Score = 239 bits (610), Expect(2) = e-124 Identities = 135/222 (60%), Positives = 160/222 (72%), Gaps = 23/222 (10%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL +D++K KYLT+IYDPFLNG FRGQ SFSPSI+NE Y T SILINKIHG+LL INS Sbjct: 452 RLSNDKRKIKYLTKIYDPFLNGPFRGQ---SFSPSIQNETYTTNSILINKIHGLLL-INS 507 Query: 461 HYPD--------------PEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRL 324 +YP+ PEFEQKI+ FDRK LL EIGFFFNLIS+FSEKSVSS NFD L Sbjct: 508 NYPEFDNSNYPEFDNSNYPEFEQKIDQFDRKFLLTEIGFFFNLISQFSEKSVSSFNFDGL 567 Query: 323 YLFPEHEQVKIYSEEXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLI 171 YLFPEHEQVKIYSEE KFL + I +D ++Q I+EISK VP WSY LI Sbjct: 568 YLFPEHEQVKIYSEEKKRKKKFLFEAIRTDQNNQTIFNRKKCTGINEISKQVPRWSYELI 627 Query: 170 DELEELTEAVSQEPQIRCRYAQRIVIFNDKTENYTQDIRPIN 45 DELE++TE +++E QIR A+R+VIFN T++ T +I P N Sbjct: 628 DELEQMTERLTKEFQIRSAKAERMVIFNGNTDSLTLNIGPRN 669 Score = 235 bits (600), Expect(2) = e-124 Identities = 127/208 (61%), Positives = 148/208 (71%), Gaps = 24/208 (11%) Frame = -1 Query: 1192 HYLGRIPAPY---FLDDGLXXXXXXXXXXXXXXXXXXEM------------EEDLSHYLF 1058 HYLGR P PY + D+ L E+ EED+ YLF Sbjct: 243 HYLGRTPVPYLYTYTDEILEYDEKQKDEINGETEIDVEIDSEQEQNGSIEDEEDILSYLF 302 Query: 1057 AKKDNTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHI 881 KKD T I+++ NL L+ PLVTTLFDY++WNRPLRYIKND+F+ VVR+ENSQFFFHI Sbjct: 303 PKKDKTLENIEQDNNLLALEKPLVTTLFDYRKWNRPLRYIKNDHFERVVRDENSQFFFHI 362 Query: 880 CQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISY--NELSNYWSSTNKEKRKKLSN 707 CQSDGKERISFTYPP+LS+FLKIME+KMDLFT+DKISY NELSNYWSS NKEKRKKLSN Sbjct: 363 CQSDGKERISFTYPPDLSSFLKIMEKKMDLFTKDKISYNDNELSNYWSSNNKEKRKKLSN 422 Query: 706 EFYKRAKVLD------KQSLPMDVLENR 641 EF+KRAKVLD K+ +P+DV ENR Sbjct: 423 EFFKRAKVLDKKYKKYKKFIPVDVFENR 450 >ref|XP_003604157.2| membrane protein Ycf1, putative [Medicago truncatula] gb|AES86354.2| membrane protein Ycf1, putative [Medicago truncatula] Length = 910 Score = 239 bits (610), Expect(2) = e-124 Identities = 135/222 (60%), Positives = 160/222 (72%), Gaps = 23/222 (10%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL +D++K KYLT+IYDPFLNG FRGQ SFSPSI+NE Y T SILINKIHG+LL INS Sbjct: 452 RLSNDKRKIKYLTKIYDPFLNGPFRGQ---SFSPSIQNETYTTNSILINKIHGLLL-INS 507 Query: 461 HYPD--------------PEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRL 324 +YP+ PEFEQKI+ FDRK LL EIGFFFNLIS+FSEKSVSS NFD L Sbjct: 508 NYPEFDNSNYPEFDNSNYPEFEQKIDQFDRKFLLTEIGFFFNLISQFSEKSVSSFNFDGL 567 Query: 323 YLFPEHEQVKIYSEEXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLI 171 YLFPEHEQVKIYSEE KFL + I +D ++Q I+EISK VP WSY LI Sbjct: 568 YLFPEHEQVKIYSEEKKRKKKFLFEAIRTDQNNQTIFNRKKCTGINEISKQVPRWSYELI 627 Query: 170 DELEELTEAVSQEPQIRCRYAQRIVIFNDKTENYTQDIRPIN 45 DELE++TE +++E QIR A+R+VIFN T++ T +I P N Sbjct: 628 DELEQMTERLTKEFQIRSAKAERMVIFNGNTDSLTLNIGPRN 669 Score = 235 bits (600), Expect(2) = e-124 Identities = 127/208 (61%), Positives = 148/208 (71%), Gaps = 24/208 (11%) Frame = -1 Query: 1192 HYLGRIPAPY---FLDDGLXXXXXXXXXXXXXXXXXXEM------------EEDLSHYLF 1058 HYLGR P PY + D+ L E+ EED+ YLF Sbjct: 243 HYLGRTPVPYLYTYTDEILEYDEKQKDEINGETEIDVEIDSEQETNGSIEDEEDILSYLF 302 Query: 1057 AKKDNTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHI 881 KKD T I+++ NL L+ PLVTTLFDY++WNRPLRYIKND+F+ VVR+ENSQFFFHI Sbjct: 303 PKKDKTLENIEQDNNLLALEKPLVTTLFDYRKWNRPLRYIKNDHFERVVRDENSQFFFHI 362 Query: 880 CQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISY--NELSNYWSSTNKEKRKKLSN 707 CQSDGKERISFTYPP+LS+FLKIME+KMDLFT+DKISY NELSNYWSS NKEKRKKLSN Sbjct: 363 CQSDGKERISFTYPPDLSSFLKIMEKKMDLFTKDKISYNDNELSNYWSSNNKEKRKKLSN 422 Query: 706 EFYKRAKVLD------KQSLPMDVLENR 641 EF+KRAKVLD K+ +P+DV ENR Sbjct: 423 EFFKRAKVLDKKYKKYKKFIPVDVFENR 450 >gb|AGV52559.1| hypothetical chloroplast RF1 (chloroplast) [Medicago truncatula f. tricycla] Length = 1756 Score = 243 bits (621), Expect(2) = e-123 Identities = 133/208 (63%), Positives = 159/208 (76%), Gaps = 9/208 (4%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL +D++K KYLT+IYDPFLNG FRGQ SFSPSI+NE Y T SILINKIHG+LLSINS Sbjct: 457 RLSNDKRKIKYLTKIYDPFLNGPFRGQ---SFSPSIKNETYTTNSILINKIHGLLLSINS 513 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 +YP EFEQKI+ FDRK LL EIGFFFNL+S+FSEKSVSS NFD LYLFPEHEQVKIYSE Sbjct: 514 NYP--EFEQKIDQFDRKFLLTEIGFFFNLMSQFSEKSVSSFNFDGLYLFPEHEQVKIYSE 571 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL + I +D ++Q I+EI+K VP WSY LIDELE++TE +++E Sbjct: 572 EKKRKKKFLFEAIRTDQNNQTIFNRKKCSGINEIAKEVPRWSYELIDELEQMTERLTKEF 631 Query: 128 QIRCRYAQRIVIFNDKTENYTQDIRPIN 45 QIR A+R+VIFN T++ T +I P N Sbjct: 632 QIRSPKAERMVIFNGNTDSLTLNIGPRN 659 Score = 229 bits (584), Expect(2) = e-123 Identities = 114/157 (72%), Positives = 132/157 (84%), Gaps = 9/157 (5%) Frame = -1 Query: 1084 EEDLSHYLFAKKDNTFNTIQKEENL-NLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRN 908 EED+ YLF KKD T I+++ NL L+ PLVTTLFDY++WNRPLRYIKND+ + VVR+ Sbjct: 299 EEDILSYLFPKKDKTLENIEQDNNLLALEKPLVTTLFDYRKWNRPLRYIKNDHLERVVRD 358 Query: 907 ENSQFFFHICQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISY--NELSNYWSSTN 734 ENSQFFFHICQSDGKERISFTYPP+LS+FLKIME+KMDLFT+DKISY NELSNYWSS N Sbjct: 359 ENSQFFFHICQSDGKERISFTYPPDLSSFLKIMEKKMDLFTKDKISYNDNELSNYWSSNN 418 Query: 733 KEKRKKLSNEFYKRAKVLD------KQSLPMDVLENR 641 KEKR KLSNEF+KRAKVLD K+ +P+DV ENR Sbjct: 419 KEKRNKLSNEFFKRAKVLDKKYKKYKKFIPVDVFENR 455 >ref|YP_009437936.1| hypothetical chloroplast RF19 (chloroplast) [Tibetia liangshanensis] gb|ATG33743.1| hypothetical chloroplast RF19 (chloroplast) [Tibetia liangshanensis] Length = 1697 Score = 241 bits (614), Expect(2) = e-121 Identities = 131/216 (60%), Positives = 155/216 (71%), Gaps = 9/216 (4%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RLC D +K KYLT+IYDPFLNG FRGQ SFSP E Y ILINKIHG+LLSINS Sbjct: 444 RLCKDDQKTKYLTKIYDPFLNGRFRGQFQKSFSP----EPYTRNYILINKIHGLLLSINS 499 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 HYP EFEQKI+PFDRKSLL EIGFFFNLISKFSEKSVSSLNFD LYLFPEHEQVKIYS+ Sbjct: 500 HYP--EFEQKIDPFDRKSLLTEIGFFFNLISKFSEKSVSSLNFDGLYLFPEHEQVKIYSK 557 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL D I +D++ + I+EISK VP WSY+LIDE E+L E ++EP Sbjct: 558 EKKRKRKFLFDAIRTDMNDETIFNGKNCIGINEISKEVPRWSYNLIDEGEQLMENSTREP 617 Query: 128 QIRCRYAQRIVIFNDKTENYTQDIRPINISNTDDYE 21 +IR R +R++IF++ E++ D I ++E Sbjct: 618 KIRFRRGERVLIFSNTRESFNHDSNIDTIEPKPEFE 653 Score = 225 bits (574), Expect(2) = e-121 Identities = 122/195 (62%), Positives = 135/195 (69%), Gaps = 11/195 (5%) Frame = -1 Query: 1192 HYLGRIPAP-YFLDD----------GLXXXXXXXXXXXXXXXXXXEMEEDLSHYLFAKKD 1046 HYLGRIPAP YF D+ G +EE LS YLF + Sbjct: 249 HYLGRIPAPFYFFDEMVETEDTDKLGEPEINLEKDLKDIEEKEKRFIEEKLSSYLFEPNE 308 Query: 1045 NTFNTIQKEENLNLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSDG 866 N + + L + PLVT LFD QRW+RP RYIKND+F+NVVRNENSQF+FHICQSDG Sbjct: 309 NEEMRLDNDIVL-YEKPLVTLLFDVQRWHRPWRYIKNDHFENVVRNENSQFYFHICQSDG 367 Query: 865 KERISFTYPPNLSTFLKIMERKMDLFTRDKISYNELSNYWSSTNKEKRKKLSNEFYKRAK 686 KERISFTYPP+LSTFLKIME+KMDLFTRDKIS NELSNYW S KEKRKKLSNE KRAK Sbjct: 368 KERISFTYPPDLSTFLKIMEKKMDLFTRDKISNNELSNYWISNTKEKRKKLSNEILKRAK 427 Query: 685 VLDKQSLPMDVLENR 641 VLDK LP+DVLE R Sbjct: 428 VLDKGFLPLDVLETR 442 >gb|AGS43959.1| hypothetical chloroplast RF19 (plastid) [Vicia faba] Length = 1681 Score = 233 bits (593), Expect(2) = e-115 Identities = 128/199 (64%), Positives = 145/199 (72%), Gaps = 9/199 (4%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL DD +K KYLT+IYDPFLNG RG++ FSP I NE T ILINKIHG+LLSINS Sbjct: 430 RLSDDNRKTKYLTKIYDPFLNGRVRGEIQKGFSPFIPNETDTTNYILINKIHGLLLSINS 489 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 + DPEFEQKI+ FDRK LLNEIGFFFNLISKFSEKSVSSLNFD LYLFPEHEQVKIYSE Sbjct: 490 N--DPEFEQKIDQFDRKLLLNEIGFFFNLISKFSEKSVSSLNFDGLYLFPEHEQVKIYSE 547 Query: 281 EXXXXXKFLLDVIESDLDH---------QKIHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E K LLD I +D + +I+EISK VP WSY L+DEL L +A +E Sbjct: 548 EKKTKRKLLLDAIRTDPTNNTIFNRKLCSEINEISKEVPRWSYDLVDELAVLMDASPKES 607 Query: 128 QIRCRYAQRIVIFNDKTEN 72 QIR A RIV+FN KT++ Sbjct: 608 QIRSPKADRIVLFNSKTDS 626 Score = 213 bits (542), Expect(2) = e-115 Identities = 112/194 (57%), Positives = 138/194 (71%), Gaps = 10/194 (5%) Frame = -1 Query: 1192 HYLGRIPAPYFLDDGLXXXXXXXXXXXXXXXXXXEME-----EDLSHYLFAKKDNTFNTI 1028 HYLGR P PY+ + + + E ED++ YL KK+NTFN Sbjct: 239 HYLGRTPLPYYYIEEMMRYDDRDLEEVKAAIDWEKEETNEEEEDITVYLSDKKENTFN-- 296 Query: 1027 QKEENLNLQLPLVTTLFDYQRWNRPLRYIKNDYFDNVVRNENSQFFFHICQSDGKERISF 848 ++ L+ LVTTLFDY++WNRPLRYIKND+F+ VVR+ENSQFFF +CQSDGK+RISF Sbjct: 297 --KKLAPLEKSLVTTLFDYRKWNRPLRYIKNDHFERVVRDENSQFFFQVCQSDGKKRISF 354 Query: 847 TYPPNLSTFLKIMERKMDLFTRDKISY--NELSNYWSSTNKEKRKKLSNEFYKRAKVLDK 674 TYPP+LSTFLKIME+KMDLF RDK SY NELSNYWSS NKEK KL NEF++RAK++D Sbjct: 355 TYPPHLSTFLKIMEKKMDLFRRDKTSYNDNELSNYWSSVNKEKGNKLINEFFQRAKMIDN 414 Query: 673 QSL---PMDVLENR 641 +S+ P+DV ENR Sbjct: 415 KSIKFSPVDVFENR 428 >ref|YP_009109892.1| hypothetical chloroplast RF19 (chloroplast) [Trifolium glanduliferum] gb|AIJ27931.1| hypothetical chloroplast RF19 (chloroplast) [Trifolium glanduliferum] Length = 1826 Score = 227 bits (578), Expect(2) = e-111 Identities = 123/224 (54%), Positives = 144/224 (64%), Gaps = 40/224 (17%) Frame = -1 Query: 1192 HYLGRIPAPYF---------------LDDGLXXXXXXXXXXXXXXXXXXEMEEDLSHYLF 1058 HYLGRIP PYF ++D +EE+L+ Y F Sbjct: 243 HYLGRIPLPYFYTEEISEHDEKQKTQINDNESDVEIDSETEEIKQEQNGFIEENLASYFF 302 Query: 1057 AKKDNTFNTIQKEENL-----------------NLQLPLVTTLFDYQRWNRPLRYIKNDY 929 KKD T + I+ + NL + PLVTTLFDY++WNRPLRYIKND+ Sbjct: 303 PKKDKTLDNIEDDNNLFIEDDNNLFIEDDNNLFEFEKPLVTTLFDYRKWNRPLRYIKNDH 362 Query: 928 FDNVVRNENSQFFFHICQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISY--NELS 755 + V++ENSQFFFHICQSDGKERISFTYPP+LSTFLKIME+KMDLFTRDKISY NELS Sbjct: 363 LERAVKDENSQFFFHICQSDGKERISFTYPPHLSTFLKIMEQKMDLFTRDKISYNDNELS 422 Query: 754 NYWSSTNKEKRKKLSNEFYKRAKVLDKQS------LPMDVLENR 641 NYWSS KEKRKKLSNEF KRAKVLDK++ LP+D+ ENR Sbjct: 423 NYWSSAIKEKRKKLSNEFLKRAKVLDKKNKKYNKFLPVDIFENR 466 Score = 204 bits (518), Expect(2) = e-111 Identities = 115/195 (58%), Positives = 136/195 (69%), Gaps = 9/195 (4%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL D +K+KYLT+IYDPFL+G FRGQ+ S SP N I LINKIHG+LLS NS Sbjct: 468 RLSKDTEKKKYLTKIYDPFLSGRFRGQLQKSSSPLTTNHI------LINKIHGLLLSSNS 521 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 + DPE E KI+ FDRK L EIGFF NLIS+FSEKSVSSLNFD LYLFPEHEQV+IYSE Sbjct: 522 N--DPELEHKIDQFDRKLLSTEIGFFVNLISQFSEKSVSSLNFDGLYLFPEHEQVEIYSE 579 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL D I +D ++Q I EISK VP WSY+LIDE+E+LTE + ++ Sbjct: 580 EKKRKKKFLFDAIRTDQNNQTIFNRKKCGYIDEISKQVPRWSYTLIDEVEQLTENIGKDA 639 Query: 128 QIRCRYAQRIVIFND 84 QIR +R VIF + Sbjct: 640 QIRSPVTERHVIFGE 654 >ref|YP_009109967.1| hypothetical chloroplast RF19 (chloroplast) [Trifolium strictum] gb|AIJ28433.1| hypothetical chloroplast RF19 (chloroplast) [Trifolium strictum] Length = 1835 Score = 225 bits (573), Expect(2) = e-109 Identities = 122/226 (53%), Positives = 144/226 (63%), Gaps = 42/226 (18%) Frame = -1 Query: 1192 HYLGRIPAPYFLDDGL-----------------XXXXXXXXXXXXXXXXXXEMEEDLSHY 1064 HYLGRIP PYF + + +EE+L+ Y Sbjct: 243 HYLGRIPLPYFYTEEISEHDEKQKTQINDNESDVEVEIDSETEQIKQEQNGFIEENLASY 302 Query: 1063 LFAKKDNTFNTIQKEENL-----------------NLQLPLVTTLFDYQRWNRPLRYIKN 935 F KKD T + I+ + NL + PLVTTLFDY++WNRPLRYIKN Sbjct: 303 FFPKKDKTLDNIEDDNNLFIEDDNNLFIEDDNNLFEFEKPLVTTLFDYRKWNRPLRYIKN 362 Query: 934 DYFDNVVRNENSQFFFHICQSDGKERISFTYPPNLSTFLKIMERKMDLFTRDKISY--NE 761 D+ + V++ENSQFFFHICQSDGKERISFTYPP+LSTFLK+ME+KMDLFTRDKISY NE Sbjct: 363 DHLERAVKDENSQFFFHICQSDGKERISFTYPPHLSTFLKLMEQKMDLFTRDKISYNDNE 422 Query: 760 LSNYWSSTNKEKRKKLSNEFYKRAKVLDKQS------LPMDVLENR 641 LSNYWSST KEKRKKLSNEF KRAKVLDK++ LP+D+ ENR Sbjct: 423 LSNYWSSTIKEKRKKLSNEFLKRAKVLDKKNKKYNKFLPVDIFENR 468 Score = 202 bits (513), Expect(2) = e-109 Identities = 113/195 (57%), Positives = 135/195 (69%), Gaps = 9/195 (4%) Frame = -3 Query: 641 RLCDDQKKRKYLTQIYDPFLNGCFRGQMPNSFSPSIENEIYKTKSILINKIHGILLSINS 462 RL D + +KYLT+IYDPFL+G FRGQ+ S SP T SILINKIHG+LLS NS Sbjct: 470 RLSKDTENKKYLTKIYDPFLSGRFRGQLQKSSSP------LTTNSILINKIHGLLLSSNS 523 Query: 461 HYPDPEFEQKINPFDRKSLLNEIGFFFNLISKFSEKSVSSLNFDRLYLFPEHEQVKIYSE 282 + DPE E KI+ FDRK L EIGFF NLIS+FSEKS+SS NFD LYLFPEHEQV+IYSE Sbjct: 524 N--DPELEHKIDQFDRKLLSTEIGFFVNLISQFSEKSISSFNFDGLYLFPEHEQVEIYSE 581 Query: 281 EXXXXXKFLLDVIESDLDHQK---------IHEISKTVPIWSYSLIDELEELTEAVSQEP 129 E KFL D I +D ++Q I EISK VP WSY+LIDE+E+LTE + ++ Sbjct: 582 EKKRKKKFLFDAIRTDQNNQTIFNRKKCGYIDEISKQVPRWSYTLIDEVEQLTENIGKDA 641 Query: 128 QIRCRYAQRIVIFND 84 QIR +R VIF + Sbjct: 642 QIRSPVTERHVIFGE 656