BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00029771
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX75793.1| retrovirus-related Pol polyprotein from transposo...   225   4e-67
gb|PNX58721.1| putative copia-type protein, partial [Trifolium p...   213   7e-67
gb|PNX96035.1| putative copia-type protein, partial [Trifolium p...   208   2e-65
gb|PNX92176.1| putative copia-type protein [Trifolium pratense]       213   2e-65
gb|KHN31995.1| Copia protein, partial [Glycine soja]                  207   2e-65
gb|PNX58238.1| copia protein, partial [Trifolium pratense]            206   4e-65
gb|PNX86354.1| retrovirus-related Pol polyprotein from transposo...   214   8e-65
gb|PNX87108.1| retrovirus-related Pol polyprotein from transposo...   214   9e-65
dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subt...   221   3e-64
gb|PNX77692.1| retrovirus-related Pol polyprotein from transposo...   214   4e-64
gb|PNX75536.1| putative copia-type protein [Trifolium pratense]       205   2e-63
gb|KHN24193.1| Retrovirus-related Pol polyprotein from transposo...   200   2e-62
dbj|GAU51097.1| hypothetical protein TSUD_185270 [Trifolium subt...   214   6e-62
dbj|GAU47169.1| hypothetical protein TSUD_28920 [Trifolium subte...   214   9e-62
gb|PNX60021.1| retrovirus-related Pol polyprotein from transposo...   200   1e-61
dbj|GAU41219.1| hypothetical protein TSUD_128950 [Trifolium subt...   206   1e-61
gb|KHN03110.1| Copia protein, partial [Glycine soja]                  196   6e-61
gb|PNX94461.1| retrovirus-related Pol polyprotein from transposo...   210   1e-60
dbj|GAU22715.1| hypothetical protein TSUD_138390 [Trifolium subt...   210   1e-60
dbj|GAU31202.1| hypothetical protein TSUD_210590 [Trifolium subt...   210   2e-60

>gb|PNX75793.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 733

 Score =  225 bits (573), Expect = 4e-67
 Identities = 102/136 (75%), Positives = 119/136 (87%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ ++SPT+THY+  CR+++YL+GT  RGLFFPR S LQ+ GF+DADWANC+DTR+S
Sbjct: 487 QQLSQFLSSPTITHYDTACRVVRYLKGTPGRGLFFPRSSSLQLLGFADADWANCLDTRRS 546

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
            SGYCFFLG+SL+SWR KKQ TVSRSSSEAEYRALSTA CELQWL+FLL +L V+C R P
Sbjct: 547 TSGYCFFLGNSLISWRAKKQNTVSRSSSEAEYRALSTAACELQWLLFLLRDLGVSCARAP 606

Query: 361 VLYCDNQSAIHIAANP 408
            LYCDNQSAIHIAANP
Sbjct: 607 ALYCDNQSAIHIAANP 622


>gb|PNX58721.1| putative copia-type protein, partial [Trifolium pratense]
          Length = 277

 Score =  213 bits (541), Expect = 7e-67
 Identities = 95/136 (69%), Positives = 118/136 (86%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ +++PT THY+  CR+++YL+ +  RGL F RDS L + GF+DADWA C+DTR+S
Sbjct: 78  QQLSQFLSAPTQTHYDTACRVVRYLKNSPGRGLLFRRDSQLHLLGFTDADWAGCLDTRRS 137

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
            SGYCFFLG+SL+SWR KKQ TVSRSSSEAEYRALS A+CELQWL++LL++L+VNC +PP
Sbjct: 138 TSGYCFFLGNSLISWRAKKQHTVSRSSSEAEYRALSFASCELQWLVYLLKDLQVNCIKPP 197

Query: 361 VLYCDNQSAIHIAANP 408
           VLYCDNQSA+HIAANP
Sbjct: 198 VLYCDNQSALHIAANP 213


>gb|PNX96035.1| putative copia-type protein, partial [Trifolium pratense]
          Length = 248

 Score =  208 bits (529), Expect = 2e-65
 Identities = 92/136 (67%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQL Q ++ PTV +YNA CR+++YL+    RG+  PR S LQ+ GFSD+DWA C+DTRKS
Sbjct: 51  QQLGQFLHKPTVNNYNAACRVIRYLKHNPGRGILLPRSSDLQILGFSDSDWAGCLDTRKS 110

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
            +GYCFF+GSSLVSW+ KKQ TVSRSSSEAEYRALS+ATCEL W++FLL++LKV C +PP
Sbjct: 111 TTGYCFFIGSSLVSWKAKKQTTVSRSSSEAEYRALSSATCELIWILFLLKDLKVQCSKPP 170

Query: 361 VLYCDNQSAIHIAANP 408
           V+YCD+QSAIHIA+NP
Sbjct: 171 VIYCDSQSAIHIASNP 186


>gb|PNX92176.1| putative copia-type protein [Trifolium pratense]
          Length = 424

 Score =  213 bits (543), Expect = 2e-65
 Identities = 95/136 (69%), Positives = 118/136 (86%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ ++SPT+THY+  CR+++YL+GT  RGLF+PR S +QV GF+DA WANC+D+R+S
Sbjct: 213 QQLSQFLSSPTITHYDTACRVVRYLKGTPGRGLFYPRSSSIQVLGFADAYWANCLDSRRS 272

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
            SGYCFFLGSSL+SWR KKQ TVSRSSSEAEY +LS A+CELQWL++LL++L+V C RP 
Sbjct: 273 TSGYCFFLGSSLISWRAKKQHTVSRSSSEAEYHSLSFASCELQWLLYLLKDLQVTCVRPA 332

Query: 361 VLYCDNQSAIHIAANP 408
            LYCDNQSAIHIA+NP
Sbjct: 333 TLYCDNQSAIHIASNP 348


>gb|KHN31995.1| Copia protein, partial [Glycine soja]
          Length = 224

 Score =  207 bits (526), Expect = 2e-65
 Identities = 93/136 (68%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ ++ PT+THYNA  R++ YL+G+  +GLFFPR S +Q+ GFS+A WA C+D+R+S
Sbjct: 21  QQLSQFLSKPTMTHYNAAYRVVIYLKGSPGQGLFFPRKSEIQLLGFSNAYWAGCLDSRRS 80

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
           +SGYCFFLG+SL+SWR KKQQTVSRSSSEAEYRALST  CELQWL++LL +L + C R P
Sbjct: 81  ISGYCFFLGASLISWRAKKQQTVSRSSSEAEYRALSTTACELQWLLYLLHDLHITCTRAP 140

Query: 361 VLYCDNQSAIHIAANP 408
            LYCDNQSA+HIAANP
Sbjct: 141 ALYCDNQSALHIAANP 156


>gb|PNX58238.1| copia protein, partial [Trifolium pratense]
          Length = 206

 Score =  206 bits (523), Expect = 4e-65
 Identities = 93/136 (68%), Positives = 114/136 (83%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ ++SPT TH++  CR+++YL+G+  RGL F RD+ LQ+ GF+DADWA C+DTR+S
Sbjct: 7   QQLSQFLSSPTQTHFDTACRVVRYLKGSPGRGLLFRRDATLQLLGFTDADWAGCLDTRRS 66

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
            SGYCFFLGSSL+SWR KKQ TVSRSSSEAEYRA S A+CELQWL++LL +L V C +P 
Sbjct: 67  TSGYCFFLGSSLISWRAKKQHTVSRSSSEAEYRASSFASCELQWLVYLLVDLNVKCIKPL 126

Query: 361 VLYCDNQSAIHIAANP 408
           VLYCDNQSA+HIA NP
Sbjct: 127 VLYCDNQSALHIAVNP 142


>gb|PNX86354.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 512

 Score =  214 bits (545), Expect = 8e-65
 Identities = 95/136 (69%), Positives = 116/136 (85%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ ++ PT  HYNA  R+LKYL+ +  RGLFFPRDS L + GFSDADWA CVDTR+S
Sbjct: 294 QQLSQFLSKPTTNHYNAAIRVLKYLKNSPGRGLFFPRDSSLHILGFSDADWAGCVDTRRS 353

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
           +SG CFFLG SL+SWRTKKQ TVSRSSSEAEYRAL+ ATCELQW+++LL+++++ C + P
Sbjct: 354 ISGQCFFLGKSLISWRTKKQLTVSRSSSEAEYRALAAATCELQWILYLLKDIQIQCSKLP 413

Query: 361 VLYCDNQSAIHIAANP 408
           V+YCDNQSA+HIAANP
Sbjct: 414 VIYCDNQSALHIAANP 429


>gb|PNX87108.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 517

 Score =  214 bits (545), Expect = 9e-65
 Identities = 95/136 (69%), Positives = 116/136 (85%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ ++ PT  HYNA  R+LKYL+ +  RGLFFPRDS L + GFSDADWA CVDTR+S
Sbjct: 294 QQLSQFLSKPTTNHYNAAIRVLKYLKNSPGRGLFFPRDSSLHILGFSDADWAGCVDTRRS 353

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
           +SG CFFLG SL+SWRTKKQ TVSRSSSEAEYRAL+ ATCELQW+++LL+++++ C + P
Sbjct: 354 ISGQCFFLGKSLISWRTKKQLTVSRSSSEAEYRALAAATCELQWILYLLKDIQIQCSKLP 413

Query: 361 VLYCDNQSAIHIAANP 408
           V+YCDNQSA+HIAANP
Sbjct: 414 VIYCDNQSALHIAANP 429


>dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subterraneum]
          Length = 1512

 Score =  221 bits (563), Expect = 3e-64
 Identities = 96/136 (70%), Positives = 121/136 (88%)
 Frame = +1

Query: 1    QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
            QQLSQ ++SPT TH++  CR+++YL+G+  RGLFFPR S LQ+ GF+DADWANC DTR+S
Sbjct: 1296 QQLSQFLSSPTTTHFDTACRVVRYLKGSPGRGLFFPRQSPLQLLGFADADWANCADTRRS 1355

Query: 181  VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
             SGYCFF+GSSL+SWR KKQ TVSRSSSEAEYR+LS A+CELQW+++LL++L ++C+RPP
Sbjct: 1356 TSGYCFFIGSSLISWRAKKQNTVSRSSSEAEYRSLSFASCELQWIVYLLKDLSIDCERPP 1415

Query: 361  VLYCDNQSAIHIAANP 408
            VLYCDNQSAIHIA+NP
Sbjct: 1416 VLYCDNQSAIHIASNP 1431


>gb|PNX77692.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
 gb|PNX79695.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 589

 Score =  214 bits (545), Expect = 4e-64
 Identities = 95/136 (69%), Positives = 116/136 (85%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ ++ PT  HYNA  R+LKYL+ +  RGLFFPRDS L + GFSDADWA CVDTR+S
Sbjct: 413 QQLSQFLSKPTTNHYNAAIRVLKYLKNSPGRGLFFPRDSSLHILGFSDADWAGCVDTRRS 472

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
           +SG CFFLG SL+SWRTKKQ TVSRSSSEAEYRAL+ ATCELQW+++LL+++++ C + P
Sbjct: 473 ISGQCFFLGKSLISWRTKKQLTVSRSSSEAEYRALAAATCELQWILYLLKDIQIQCSKLP 532

Query: 361 VLYCDNQSAIHIAANP 408
           V+YCDNQSA+HIAANP
Sbjct: 533 VIYCDNQSALHIAANP 548


>gb|PNX75536.1| putative copia-type protein [Trifolium pratense]
          Length = 309

 Score =  205 bits (521), Expect = 2e-63
 Identities = 94/135 (69%), Positives = 111/135 (82%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ + SPT  HY+  CR++KYL+G+ DRGLFF R S LQ+ GF DADWA C+DT++S
Sbjct: 153 QQLSQFLTSPTHVHYDTACRVVKYLKGSPDRGLFFSRTSKLQLLGFIDADWAGCLDTQRS 212

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
            SGYCFFLGSSL+SWR KKQ TV+RSS EAEYR LS A CELQWL +LLE+L+V C +PP
Sbjct: 213 TSGYCFFLGSSLISWRAKKQHTVARSSFEAEYRVLSFAACELQWLTYLLEDLRVLCIKPP 272

Query: 361 VLYCDNQSAIHIAAN 405
           VLYCDNQSA+HIA N
Sbjct: 273 VLYCDNQSALHIAVN 287


>gb|KHN24193.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
 gb|KHN37451.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 234

 Score =  200 bits (508), Expect = 2e-62
 Identities = 89/136 (65%), Positives = 111/136 (81%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ + +PT  H+NA CR+L+YL+    +G+FF R S +Q+ G+SDADWA C+D+RKS
Sbjct: 30  QQLSQFMQAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCMDSRKS 89

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
           +SGYCFF+G SLVSWR KKQ TVSRSSSEAEYRALS+A CELQWL++L  +L+V   R P
Sbjct: 90  ISGYCFFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTP 149

Query: 361 VLYCDNQSAIHIAANP 408
            LYCDNQSA+HIA+NP
Sbjct: 150 TLYCDNQSAVHIASNP 165


>dbj|GAU51097.1| hypothetical protein TSUD_185270 [Trifolium subterraneum]
          Length = 1179

 Score =  214 bits (546), Expect = 6e-62
 Identities = 96/136 (70%), Positives = 118/136 (86%)
 Frame = +1

Query: 1    QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
            QQLSQ + +PT+THYNA CRIL+YL+     GL FPRDS LQ+ GF+DADWA CVD+RKS
Sbjct: 981  QQLSQFLQAPTITHYNAACRILRYLKQEPGLGLMFPRDSELQLLGFADADWAGCVDSRKS 1040

Query: 181  VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
             +GYCFFLGSSL+SW+ KKQ+T++RSSS+AEY AL++ATCELQWL++LLE+L V C RPP
Sbjct: 1041 TTGYCFFLGSSLISWKAKKQETIARSSSKAEYIALTSATCELQWLLYLLEDLNVKCSRPP 1100

Query: 361  VLYCDNQSAIHIAANP 408
            VLYCD+QSAIHIA+NP
Sbjct: 1101 VLYCDSQSAIHIASNP 1116


>dbj|GAU47169.1| hypothetical protein TSUD_28920 [Trifolium subterraneum]
          Length = 1086

 Score =  214 bits (544), Expect = 9e-62
 Identities = 94/136 (69%), Positives = 118/136 (86%)
 Frame = +1

Query: 1    QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
            QQLSQ +++PT+ HYNA CR+L+YL+     GL FPR S +Q+ G++DADWA C+DTRKS
Sbjct: 885  QQLSQFLHAPTMVHYNAACRVLRYLKQEPRLGLLFPRSSEIQILGYADADWAGCIDTRKS 944

Query: 181  VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
             SGYCFFLG+SL+SW+ KKQQT+SRSSSEAEYRALS+A+CELQWL++LL +L+V C RPP
Sbjct: 945  TSGYCFFLGTSLISWKAKKQQTISRSSSEAEYRALSSASCELQWLLYLLNDLQVKCTRPP 1004

Query: 361  VLYCDNQSAIHIAANP 408
            VLYCD+QSAIHIA+NP
Sbjct: 1005 VLYCDSQSAIHIASNP 1020


>gb|PNX60021.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 301

 Score =  200 bits (509), Expect = 1e-61
 Identities = 87/136 (63%), Positives = 115/136 (84%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ +++PTVTHY A CR+++YL+    RGL F R++ LQ+ G+SDADWA C+DTR+S
Sbjct: 107 QQLSQFLHNPTVTHYKAACRVIRYLKHNPGRGLLFQRNADLQLLGYSDADWAGCIDTRRS 166

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
            +GYCFFLG+SL+SW+ KKQ T+S+SSSEAEYRALS+ATCEL WL++LL++L V   + P
Sbjct: 167 TTGYCFFLGTSLISWKAKKQTTISKSSSEAEYRALSSATCELTWLLYLLKDLHVESSKQP 226

Query: 361 VLYCDNQSAIHIAANP 408
           V+YCDNQSA+HIA+NP
Sbjct: 227 VIYCDNQSALHIASNP 242


>dbj|GAU41219.1| hypothetical protein TSUD_128950 [Trifolium subterraneum]
          Length = 539

 Score =  206 bits (525), Expect = 1e-61
 Identities = 92/136 (67%), Positives = 114/136 (83%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ ++ PTVTHY A CR+++YL+ +  +GL  PR+S +Q+ G+SDADWA C+DTR+S
Sbjct: 334 QQLSQFLHKPTVTHYKAACRVVRYLKHSPGKGLMLPRNSEIQILGYSDADWAGCLDTRRS 393

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
            SGYCFFLG SLVSW+ KKQ TVSRSSSEA+YRALSTATCEL WL+FLL +L   C +PP
Sbjct: 394 TSGYCFFLGMSLVSWKAKKQVTVSRSSSEADYRALSTATCELIWLLFLLRDLNTTCSKPP 453

Query: 361 VLYCDNQSAIHIAANP 408
           VLYCD+QSA+HIA+NP
Sbjct: 454 VLYCDSQSAMHIASNP 469


>gb|KHN03110.1| Copia protein, partial [Glycine soja]
          Length = 245

 Score =  196 bits (499), Expect = 6e-61
 Identities = 90/136 (66%), Positives = 111/136 (81%)
 Frame = +1

Query: 1   QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
           QQLSQ +  PT +H  A  R+L+YL+    +GLFF RDS   + GFSDADWA CVDTR+S
Sbjct: 36  QQLSQFMAHPTKSHLGAARRVLRYLKSCPSKGLFFKRDSPTHLIGFSDADWATCVDTRRS 95

Query: 181 VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
           ++GYCFFLG+SL+SW+TKKQ TVSRSSSEAEYRAL+T TCELQWL +LL++LK+ C +  
Sbjct: 96  ITGYCFFLGNSLISWKTKKQNTVSRSSSEAEYRALATNTCELQWLSYLLDDLKITCTKST 155

Query: 361 VLYCDNQSAIHIAANP 408
           VLYCDNQSA++IAANP
Sbjct: 156 VLYCDNQSALYIAANP 171


>gb|PNX94461.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1000

 Score =  210 bits (535), Expect = 1e-60
 Identities = 96/136 (70%), Positives = 115/136 (84%)
 Frame = +1

Query: 1    QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
            QQLSQ ++ PT THY A  R+LKYL+    RGLFFPR S LQ+ GFSDADWA C D+R+S
Sbjct: 775  QQLSQFLSKPTHTHYTAALRVLKYLKNCPGRGLFFPRSSSLQILGFSDADWAGCKDSRRS 834

Query: 181  VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
            +SG+CFFLG SL+SWRTKKQ TV+RSSSEAEYRAL++ATCELQWL++LL++L V C + P
Sbjct: 835  ISGHCFFLGQSLISWRTKKQITVARSSSEAEYRALASATCELQWLVYLLQDLHVTCSKLP 894

Query: 361  VLYCDNQSAIHIAANP 408
            VLYCDNQSA+HIAANP
Sbjct: 895  VLYCDNQSALHIAANP 910


>dbj|GAU22715.1| hypothetical protein TSUD_138390 [Trifolium subterraneum]
          Length = 955

 Score =  210 bits (534), Expect = 1e-60
 Identities = 91/136 (66%), Positives = 118/136 (86%)
 Frame = +1

Query: 1    QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
            QQLSQ ++ PT  HYNA CR+++YL+ +  +GLFFPR+  LQ+ GFSDADWA C+DTR+S
Sbjct: 802  QQLSQFLHQPTTAHYNAACRVIRYLKYSPGKGLFFPRNCDLQLLGFSDADWAGCIDTRRS 861

Query: 181  VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
             SG+CFF+G+SL+SW+ KKQ TVSRSSSEAEYRALS+ATCEL WL++LL++LK+ C +PP
Sbjct: 862  TSGHCFFIGTSLISWKAKKQSTVSRSSSEAEYRALSSATCELIWLLYLLKDLKIECHKPP 921

Query: 361  VLYCDNQSAIHIAANP 408
            VLYCD+QSA+HIA+NP
Sbjct: 922  VLYCDSQSAMHIASNP 937


>dbj|GAU31202.1| hypothetical protein TSUD_210590 [Trifolium subterraneum]
          Length = 1059

 Score =  210 bits (534), Expect = 2e-60
 Identities = 93/136 (68%), Positives = 116/136 (85%)
 Frame = +1

Query: 1    QQLSQHVNSPTVTHYNATCRILKYLQGTSDRGLFFPRDSILQVFGFSDADWANCVDTRKS 180
            QQLSQ ++ PT+ HYNA CR+++YL+    RGLFFPR   LQ+ GF+DADWA C+DTR+S
Sbjct: 854  QQLSQFLSKPTMVHYNAACRVVRYLKHNPGRGLFFPRHFDLQLLGFTDADWARCIDTRRS 913

Query: 181  VSGYCFFLGSSLVSWRTKKQQTVSRSSSEAEYRALSTATCELQWLIFLLEELKVNCDRPP 360
             +GYCFFLGSSLVSW+ KKQ TVSRSSSEAEYRALSTATCEL WL FL+++L ++C +PP
Sbjct: 914  TTGYCFFLGSSLVSWKAKKQLTVSRSSSEAEYRALSTATCELIWLTFLMKDLNIHCSKPP 973

Query: 361  VLYCDNQSAIHIAANP 408
            V+YCD+QSA+HIA+NP
Sbjct: 974  VIYCDSQSAMHIASNP 989