BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00029264
         (666 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP35468.1| Retrovirus-related Pol polyprotein from transposo...   233   1e-70
gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]   222   2e-69
gb|PNX93789.1| copia-type polyprotein [Trifolium pratense]            215   3e-68
gb|PNX99782.1| copia-type polyprotein [Trifolium pratense]            209   1e-67
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen...   217   6e-66
gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinen...   217   6e-66
gb|PRQ33299.1| putative RNA-directed DNA polymerase [Rosa chinen...   210   2e-65
gb|PNX71231.1| copia-type polyprotein, partial [Trifolium pratense]   212   2e-65
gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinen...   217   2e-65
gb|PNX94522.1| copia-type polyprotein [Trifolium pratense]            210   6e-65
dbj|GAU51371.1| hypothetical protein TSUD_247260 [Trifolium subt...   210   8e-65
emb|CBI37296.3| unnamed protein product, partial [Vitis vinifera]     200   3e-64
dbj|GAU26746.1| hypothetical protein TSUD_317440 [Trifolium subt...   199   4e-64
dbj|GAU13723.1| hypothetical protein TSUD_348270 [Trifolium subt...   203   7e-64
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               196   1e-63
gb|PNX66220.1| copia-type polyprotein, partial [Trifolium pratense]   207   2e-63
gb|PRQ38021.1| putative RNA-directed DNA polymerase [Rosa chinen...   209   3e-63
dbj|GAU49517.1| hypothetical protein TSUD_300440 [Trifolium subt...   207   3e-63
dbj|GAU42405.1| hypothetical protein TSUD_324600 [Trifolium subt...   208   4e-63
dbj|GAU16533.1| hypothetical protein TSUD_167640 [Trifolium subt...   207   4e-63

>gb|KYP35468.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 508

 Score =  233 bits (594), Expect = 1e-70
 Identities = 107/158 (67%), Positives = 136/158 (86%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           +LELIHS+ICG  +P SNS++RYFI+FIDDF+   WV+FL EK  A  TFK+F++M+EKE
Sbjct: 154 RLELIHSDICGPSTPTSNSNRRYFITFIDDFSRKTWVFFLCEKAEAFETFKRFRLMVEKE 213

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           + CVISCLRTDRGGEFNS +F++FC+ NGIRRQ  AAYTPQQNGVA+RKNRT+M+MVR++
Sbjct: 214 SNCVISCLRTDRGGEFNSNDFNEFCTMNGIRRQLTAAYTPQQNGVAERKNRTIMDMVRTM 273

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           L EAK+ K FWPEAVR + Y+LNRCP V++KD+TPE+A
Sbjct: 274 LCEAKIHKSFWPEAVRWTVYLLNRCPTVAVKDLTPEEA 311



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 33/37 (89%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           KPSV +L+VFGCIA++H+ DA R+K+D+KS +C+FLG
Sbjct: 316 KPSVRHLKVFGCIAYVHIADANRKKLDDKSSKCVFLG 352


>gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1326

 Score =  222 bits (565), Expect(3) = 2e-69
 Identities = 103/158 (65%), Positives = 126/158 (79%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           KLELIH+++CG ISP SNS+KRY + FIDD++   WVYFL EK  AL +FK FK M+EKE
Sbjct: 488 KLELIHADVCGPISPSSNSNKRYILLFIDDYSRKSWVYFLVEKSEALNSFKCFKTMVEKE 547

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
               I CLRTDRGGEFNS EF+ FC ++G++RQ   AYTPQQNGVA+RKNRTVMNMVRSL
Sbjct: 548 AEMAIKCLRTDRGGEFNSNEFNDFCKQSGVKRQLTTAYTPQQNGVAERKNRTVMNMVRSL 607

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           L +  +PK FWPEAV  + YVLNRCP +++KD+TPE+A
Sbjct: 608 LFDKNIPKTFWPEAVNWTIYVLNRCPTLAVKDVTPEEA 645



 Score = 59.3 bits (142), Expect(3) = 2e-69
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           KPSV + RVFGCIAH+HVP+A+R K+D++S+ C+ LG
Sbjct: 650 KPSVNHFRVFGCIAHVHVPEAKRTKLDSRSITCVLLG 686



 Score = 31.6 bits (70), Expect(3) = 2e-69
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 72  LRISEESKAYRLHDTIKKKITISK 1
           L +SEESK YR  D + KKI +S+
Sbjct: 685 LGVSEESKGYRFFDPVSKKIVVSR 708


>gb|PNX93789.1| copia-type polyprotein [Trifolium pratense]
          Length = 1347

 Score =  215 bits (547), Expect(3) = 3e-68
 Identities = 100/158 (63%), Positives = 126/158 (79%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           KL+L+H++ICG I P+SNS+KRYF+SFIDDFT   W+YFL EK  A   FK FK  +EKE
Sbjct: 492 KLQLVHADICGPIKPESNSNKRYFLSFIDDFTRKTWIYFLHEKSEAFAMFKNFKAYVEKE 551

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           +   I+ LRTDRGGEFNS EF++FC   GI RQ  AAYTPQQNGVA+RKNRT+MNMVRS+
Sbjct: 552 SGAYITSLRTDRGGEFNSNEFEEFCKVQGISRQLTAAYTPQQNGVAERKNRTIMNMVRSM 611

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           L E K+PK FWPEAV+ S ++LNRCP +++++ TPE+A
Sbjct: 612 LVEKKVPKMFWPEAVKWSVHILNRCPTLAVQNKTPEEA 649



 Score = 58.5 bits (140), Expect(3) = 3e-68
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           KP++ Y RVFGC+AH H+PD +R K+D+KS +C+ LG
Sbjct: 654 KPTINYFRVFGCVAHAHIPDQKRSKLDDKSKKCVLLG 690



 Score = 35.0 bits (79), Expect(3) = 3e-68
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -1

Query: 84  KMHFLRISEESKAYRLHDTIKKKITISK 1
           K   L +S+ESKAY+L+D + KKI ISK
Sbjct: 685 KCVLLGVSDESKAYKLYDPVSKKIIISK 712


>gb|PNX99782.1| copia-type polyprotein [Trifolium pratense]
          Length = 912

 Score =  209 bits (533), Expect(3) = 1e-67
 Identities = 92/158 (58%), Positives = 124/158 (78%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           KLEL+HS+ICG I+P+SN   RYFI+FIDDFT   W+YFL +K  A   FKKFK ++E E
Sbjct: 481 KLELVHSDICGPINPQSNGGNRYFITFIDDFTKKTWIYFLQKKSSAFDVFKKFKSLVENE 540

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           + C+I CLRTDR GE+ S EF++FC  +G++RQ    YTPQQNGV++RKNRTV+NMVRS+
Sbjct: 541 SSCLIQCLRTDRSGEYTSNEFNEFCKSHGVKRQLTTVYTPQQNGVSERKNRTVLNMVRSM 600

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           +S   +PK+FWPEA + + YV+NRCP  ++K++TPE+A
Sbjct: 601 ISARSVPKKFWPEAAKWATYVMNRCPTHAVKNVTPEEA 638



 Score = 62.8 bits (151), Expect(3) = 1e-67
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           KPSV + RVFGC+AH H+PD  R+K+DNKS+ C+FLG
Sbjct: 643 KPSVHHFRVFGCLAHAHIPDVHRKKLDNKSIACVFLG 679



 Score = 34.3 bits (77), Expect(3) = 1e-67
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = -1

Query: 75  FLRISEESKAYRLHDTIKKKITISK 1
           FL +SEESKAY+L++ I++KI +S+
Sbjct: 677 FLGVSEESKAYKLYNPIERKIIVSR 701


>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1316

 Score =  217 bits (552), Expect(2) = 6e-66
 Identities = 104/158 (65%), Positives = 126/158 (79%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           +L+LIHS+ICG I P SNS KRY ISFIDD++   WVYFL EK  A  TFK FK ++EKE
Sbjct: 491 RLQLIHSDICGPIKPLSNSRKRYLISFIDDYSRKTWVYFLYEKSQAFTTFKSFKCLVEKE 550

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           T   I CLRTDRGGEF S+EF+ FCS +GI RQ  AAYTPQQNGVA+RKNRT+MNMVRS+
Sbjct: 551 TGDYIQCLRTDRGGEFTSQEFNTFCSTHGISRQLTAAYTPQQNGVAERKNRTIMNMVRSM 610

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           LSE ++PK FWPEAV  S ++LNR P +++KD+TPE+A
Sbjct: 611 LSEKQVPKVFWPEAVNWSIHILNRSPTLAVKDMTPEEA 648



 Score = 62.8 bits (151), Expect(2) = 6e-66
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLGSVKNLK 48
           KP+V Y RVFGCIAH+H+P+A+R+K+D+KS +C+ LG  K  K
Sbjct: 653 KPAVHYFRVFGCIAHVHIPEAKRKKLDDKSYKCVLLGVSKESK 695


>gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1044

 Score =  217 bits (552), Expect(2) = 6e-66
 Identities = 104/158 (65%), Positives = 126/158 (79%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           +L+LIHS+ICG I P SNS KRY ISFIDD++   WVYFL EK  A  TFK FK ++EKE
Sbjct: 210 RLQLIHSDICGPIKPLSNSRKRYLISFIDDYSRKTWVYFLYEKSQAFTTFKSFKCLVEKE 269

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           T   I CLRTDRGGEF S+EF+ FCS +GI RQ  AAYTPQQNGVA+RKNRT+MNMVRS+
Sbjct: 270 TGDYIQCLRTDRGGEFTSQEFNTFCSTHGISRQLTAAYTPQQNGVAERKNRTIMNMVRSM 329

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           LSE ++PK FWPEAV  S ++LNR P +++KD+TPE+A
Sbjct: 330 LSEKQVPKVFWPEAVNWSIHILNRSPTLAVKDMTPEEA 367



 Score = 62.8 bits (151), Expect(2) = 6e-66
 Identities = 25/43 (58%), Positives = 35/43 (81%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLGSVKNLK 48
           KP+V Y RVFGCIAH+H+P+A+R+K+D+KS +C+ LG  K  K
Sbjct: 372 KPAVHYFRVFGCIAHVHIPEAKRKKLDDKSYKCVLLGVSKESK 414


>gb|PRQ33299.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1363

 Score =  210 bits (534), Expect(3) = 2e-65
 Identities = 100/157 (63%), Positives = 119/157 (75%)
 Frame = -3

Query: 664  KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
            +LELIH+++CG ISP SNS K+Y +  IDD++   W YFL+EK      FK FKI++EKE
Sbjct: 552  RLELIHADLCGPISPISNSGKKYVLCLIDDYSRKAWSYFLNEKSETFAVFKFFKILVEKE 611

Query: 484  T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
            T   I CLRTDRGGEF S EF+ FC ENGIRRQ   AYTPQQNGVA+RKNRTVMN VR +
Sbjct: 612  TSLAIKCLRTDRGGEFTSAEFNSFCKENGIRRQLTTAYTPQQNGVAERKNRTVMNSVRCM 671

Query: 304  LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEK 194
            L E  +PK FWPEAV+ + YVLNRCP V+LKD TPE+
Sbjct: 672  LFEKGIPKPFWPEAVKWTVYVLNRCPTVALKDTTPEE 708



 Score = 56.6 bits (135), Expect(3) = 2e-65
 Identities = 23/37 (62%), Positives = 30/37 (81%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           KPSV +LRVFGC+ H+HVPD +R K++NKS   +FLG
Sbjct: 714 KPSVEHLRVFGCVCHVHVPDVKRTKLENKSTSGVFLG 750



 Score = 32.3 bits (72), Expect(3) = 2e-65
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -1

Query: 75  FLRISEESKAYRLHDTIKKKITISK 1
           FL IS+ESK YR++D + KKI  S+
Sbjct: 748 FLGISDESKGYRIYDPLTKKIMTSR 772


>gb|PNX71231.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 1017

 Score =  212 bits (540), Expect(3) = 2e-65
 Identities = 102/158 (64%), Positives = 123/158 (77%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           KLEL+H++ICG ISP S  +KRYFI FIDD++   WVYFL+ K  A  TFK FK ++EKE
Sbjct: 187 KLELVHADICGPISPFSEGNKRYFICFIDDYSRKAWVYFLAYKSDAFTTFKLFKALVEKE 246

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           T   I CLRTDRGGEF S EF ++C  NGI+RQ  AAYTPQQNGVA+RKNRTVMNMVRSL
Sbjct: 247 TDLSIKCLRTDRGGEFTSNEFKEYCKMNGIKRQLTAAYTPQQNGVAERKNRTVMNMVRSL 306

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           L E  +P++FW EAV  +FYVLNRCP  S+K++TP +A
Sbjct: 307 LVEKNVPRKFWAEAVNWAFYVLNRCPTSSVKEMTPVEA 344



 Score = 54.3 bits (129), Expect(3) = 2e-65
 Identities = 23/37 (62%), Positives = 30/37 (81%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           KPSV +LRVFGCIA+ HVPDA+R K+++KS  C+  G
Sbjct: 349 KPSVGHLRVFGCIAYAHVPDARRTKLEDKSRCCVLFG 385



 Score = 32.3 bits (72), Expect(3) = 2e-65
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = -1

Query: 66  ISEESKAYRLHDTIKKKITISK 1
           +SEESKAYRL+D   K+I IS+
Sbjct: 386 VSEESKAYRLYDPTSKRIIISR 407


>gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1302

 Score =  217 bits (552), Expect(2) = 2e-65
 Identities = 103/158 (65%), Positives = 127/158 (80%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           +L+LIHS+ICG I P SN+ KRY ISFIDD++   WVYFL+EK  A  TFK FK ++EKE
Sbjct: 489 RLQLIHSDICGPIKPLSNNRKRYLISFIDDYSRKTWVYFLNEKSQAFTTFKSFKCLVEKE 548

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           T   I CLRTDRGGEF S+EF+ FCS +GI RQ  AAYTPQQNGVA+RKNRT+MNMVRS+
Sbjct: 549 TGDYIQCLRTDRGGEFTSQEFNTFCSTHGISRQLTAAYTPQQNGVAERKNRTIMNMVRSM 608

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           LSE ++PK FWPEAV  S ++LNR P +++KD+TPE+A
Sbjct: 609 LSEKQVPKVFWPEAVNWSIHILNRSPTLAVKDMTPEEA 646



 Score = 60.8 bits (146), Expect(2) = 2e-65
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           KP V Y +VFGCIAH+H+P+A+R+K+DNKS +C+ LG
Sbjct: 651 KPVVHYFKVFGCIAHVHIPEAKRKKLDNKSYKCVLLG 687


>gb|PNX94522.1| copia-type polyprotein [Trifolium pratense]
          Length = 1172

 Score =  210 bits (534), Expect(2) = 6e-65
 Identities = 99/157 (63%), Positives = 122/157 (77%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           +LEL+HS+ICG I+P SNS  RYF++FIDD++   W YFL  K  AL  FKKFK M+EKE
Sbjct: 478 RLELVHSDICGPITPASNSDNRYFLTFIDDYSRKTWAYFLKNKSSALEYFKKFKNMVEKE 537

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           T   I CLRTDRGGEFNS EF+ FC  NGI+RQ  AAYTPQQNG+A+RKNRT+M+MVRS+
Sbjct: 538 TGESICCLRTDRGGEFNSNEFNNFCEVNGIKRQVTAAYTPQQNGIAKRKNRTIMDMVRSM 597

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEK 194
           +S   +PK FWPEAV  + YVLNR PA ++ D+TPE+
Sbjct: 598 ISGKDIPKVFWPEAVNWAIYVLNRSPAAAIPDVTPEE 634



 Score = 66.2 bits (160), Expect(2) = 6e-65
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = -2

Query: 197 ESMQNERKPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLGSVKNLK 48
           E   +  KP+V + R+FGCIA+ HVPDAQRRK D+KS++CIFLG  K  K
Sbjct: 633 EEFWSSSKPTVKHFRIFGCIAYTHVPDAQRRKFDDKSVKCIFLGISKESK 682


>dbj|GAU51371.1| hypothetical protein TSUD_247260 [Trifolium subterraneum]
          Length = 1980

 Score =  210 bits (535), Expect(3) = 8e-65
 Identities = 101/158 (63%), Positives = 122/158 (77%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           KLEL+H++ICG ISP S  +KRYFI FIDD++   WVYFL+ K  A  TFK FK ++EKE
Sbjct: 491 KLELVHADICGPISPFSEGNKRYFICFIDDYSRKAWVYFLAYKSDAFTTFKLFKALVEKE 550

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           T   I CLRTDRGGEF S EF ++C  NGI+RQ   AYTPQQNGVA+RKNRTVMNMVRSL
Sbjct: 551 TGLSIKCLRTDRGGEFTSNEFKEYCKMNGIKRQLTVAYTPQQNGVAERKNRTVMNMVRSL 610

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           L E  +P++FW EAV  +FYVLNRCP  S+K++TP +A
Sbjct: 611 LVEKNVPRKFWVEAVNWAFYVLNRCPTSSVKEMTPVEA 648



 Score = 54.3 bits (129), Expect(3) = 8e-65
 Identities = 23/37 (62%), Positives = 30/37 (81%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           KPSV +LRVFGCIA+ HVPDA+R K+++KS  C+  G
Sbjct: 653 KPSVGHLRVFGCIAYAHVPDARRTKLEDKSRCCVLFG 689



 Score = 32.3 bits (72), Expect(3) = 8e-65
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = -1

Query: 66  ISEESKAYRLHDTIKKKITISK 1
           +SEESKAYRL+D   K+I IS+
Sbjct: 690 VSEESKAYRLYDPTSKRIIISR 711


>emb|CBI37296.3| unnamed protein product, partial [Vitis vinifera]
          Length = 3048

 Score =  200 bits (509), Expect(3) = 3e-64
 Identities = 97/157 (61%), Positives = 119/157 (75%)
 Frame = -3

Query: 661 LELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKET 482
           L+L+H++ICG I+P SNS KRY ++F DDF+   WVYFL EK  A   FK FK  +EKET
Sbjct: 513 LQLVHADICGPINPISNSKKRYLLTFTDDFSRKTWVYFLVEKSEAFAVFKSFKTYVEKET 572

Query: 481 *CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSLL 302
              + CLRTDRGGEF S+EF  FC  +GIRRQ  AAYTPQQNGVA+RKNRT+MNMVRS+L
Sbjct: 573 SSFLRCLRTDRGGEFTSQEFAIFCDVHGIRRQLTAAYTPQQNGVAERKNRTIMNMVRSML 632

Query: 301 SEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           S  KLPK FWPEAV  + +VLNR P  ++++ TPE+A
Sbjct: 633 SAKKLPKTFWPEAVNWTVHVLNRSPTFAVQNKTPEEA 669



 Score = 60.1 bits (144), Expect(3) = 3e-64
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -2

Query: 197 ESMQNERKPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           E    + KPSV Y RVFGC++H+HVPD++R K+D+KS  C+ LG
Sbjct: 667 EEAWGKLKPSVDYFRVFGCLSHVHVPDSKRTKLDDKSFSCVLLG 710



 Score = 34.7 bits (78), Expect(3) = 3e-64
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -1

Query: 72  LRISEESKAYRLHDTIKKKITISK 1
           L +SEESKAYRL+D I +KI IS+
Sbjct: 709 LGVSEESKAYRLYDPISQKIIISR 732


>dbj|GAU26746.1| hypothetical protein TSUD_317440 [Trifolium subterraneum]
          Length = 1608

 Score =  199 bits (506), Expect(3) = 4e-64
 Identities = 93/158 (58%), Positives = 120/158 (75%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           KL+L+H++ICG I+P SNS+KRY +SFIDDFT   W+YFL EK  A   FK FK  +EKE
Sbjct: 494 KLQLVHADICGPITPSSNSNKRYILSFIDDFTRKAWIYFLHEKSEAFGRFKNFKACVEKE 553

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
               I+CLRTDRGGEF S EF++FC + GI RQ  A+YTPQQNGVA+RKNRT+MN VR++
Sbjct: 554 VGAFITCLRTDRGGEFISNEFEEFCKDQGICRQLTASYTPQQNGVAERKNRTIMNAVRAV 613

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           L+E ++P+ FWPEAV+   +V NR P  ++  ITPE+A
Sbjct: 614 LNERQVPRVFWPEAVKWCVHVQNRSPTSAVDHITPEEA 651



 Score = 62.0 bits (149), Expect(3) = 4e-64
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           +PSV Y R+FGC+AH HVPD +R K+D+KS RC+FLG
Sbjct: 656 RPSVDYFRIFGCVAHAHVPDQKRSKLDDKSKRCVFLG 692



 Score = 33.5 bits (75), Expect(3) = 4e-64
 Identities = 13/25 (52%), Positives = 21/25 (84%)
 Frame = -1

Query: 75  FLRISEESKAYRLHDTIKKKITISK 1
           FL +S+ESKAY+L D I+KK+ +++
Sbjct: 690 FLGVSDESKAYKLFDPIEKKVIVNR 714


>dbj|GAU13723.1| hypothetical protein TSUD_348270 [Trifolium subterraneum]
          Length = 1117

 Score =  203 bits (517), Expect(3) = 7e-64
 Identities = 96/158 (60%), Positives = 122/158 (77%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           KLEL+HS+ICG I+P SN   +YFI+F DD T   W Y L +K  A   FKKFK +IEKE
Sbjct: 484 KLELVHSDICGPINPTSNGGSKYFITFTDDVTRKTWTYPLKDKASAFDCFKKFKALIEKE 543

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           + C I CLRTDRGGEF S +F++FCSE+GI+RQ  AAYTPQQNGV++RKN+T++NMVRS+
Sbjct: 544 SDCTIKCLRTDRGGEFTSSKFNEFCSEHGIKRQLTAAYTPQQNGVSERKNKTLLNMVRSM 603

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           L    +PK FWPEAV  + YV+NR P +S+KD+TPE+A
Sbjct: 604 LVGKCVPKLFWPEAVVWATYVINRSPTLSVKDVTPEEA 641



 Score = 56.2 bits (134), Expect(3) = 7e-64
 Identities = 20/37 (54%), Positives = 32/37 (86%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           KPSV++ ++FGCI ++HVP+AQR+K+D K ++C+ LG
Sbjct: 646 KPSVSHFKIFGCIGYVHVPEAQRKKLDPKGIKCVHLG 682



 Score = 34.3 bits (77), Expect(3) = 7e-64
 Identities = 15/24 (62%), Positives = 21/24 (87%)
 Frame = -1

Query: 72  LRISEESKAYRLHDTIKKKITISK 1
           L +SEESKAY+L+D ++KKI IS+
Sbjct: 681 LGVSEESKAYKLYDPMQKKIIISR 704


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  196 bits (497), Expect(3) = 1e-63
 Identities = 93/158 (58%), Positives = 119/158 (75%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           +L+L+HS+ICG I+P S+S KRY +SFIDDFT   WVYFL EK  A  TFK FK  +EKE
Sbjct: 494 QLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKE 553

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
               ++CLRTDRGGEF S EF +FC  +GI RQ  AA+TPQQNGVA+RKNRT+MN VRS+
Sbjct: 554 IGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSM 613

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           LSE ++PK FW EA + S ++ NR P  +++ +TPE+A
Sbjct: 614 LSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEA 651



 Score = 59.3 bits (142), Expect(3) = 1e-63
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -2

Query: 197 ESMQNERKPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           E   + RKP V Y RVFGCI ++H+PD +R K+D+KS +C+FLG
Sbjct: 649 EEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLG 692



 Score = 37.7 bits (86), Expect(3) = 1e-63
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = -1

Query: 84  KMHFLRISEESKAYRLHDTIKKKITISK 1
           K  FL +SEESKA+RL+D + KKI ISK
Sbjct: 687 KCVFLGVSEESKAWRLYDPVMKKIVISK 714


>gb|PNX66220.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 268

 Score =  207 bits (527), Expect = 2e-63
 Identities = 97/179 (54%), Positives = 131/179 (73%), Gaps = 2/179 (1%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           +LELIHS+ICG I+P+SN   RYFI+F DDF+   W+Y L EK +AL  FK FK ++EKE
Sbjct: 37  RLELIHSDICGPITPQSNGGSRYFITFTDDFSRKTWIYVLKEKSLALDCFKSFKALVEKE 96

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
             C I CLRTDRGGE+ S  F  FCS+ GI+RQ  AAYTPQQNGV++RKNRT++N+VRS+
Sbjct: 97  AKCAIQCLRTDRGGEYTSNAFSDFCSKEGIKRQLIAAYTPQQNGVSERKNRTLLNIVRSM 156

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKACRMRENPL*H--TLECLVALH 134
           +    +PK+FWPEA++ + YV+NR P +S+KD+TPE+A   R+  + H     C+  +H
Sbjct: 157 IHARSVPKRFWPEAIKWATYVMNRSPTLSVKDMTPEEAWSGRKPSVHHFKVFGCVAHVH 215



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = -2

Query: 197 ESMQNERKPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           E   + RKPSV + +VFGC+AH+H+ D+QR+K+D+KS +CI LG
Sbjct: 192 EEAWSGRKPSVHHFKVFGCVAHVHIHDSQRKKLDDKSKKCILLG 235


>gb|PRQ38021.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 719

 Score =  209 bits (532), Expect(2) = 3e-63
 Identities = 98/158 (62%), Positives = 125/158 (79%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           +L+L+H++ICG I+P SNS KRY +SFIDDF+   WVYFL+EK  A   FK++K ++EKE
Sbjct: 502 RLQLVHADICGPITPTSNSDKRYVLSFIDDFSRKMWVYFLTEKSQAFTMFKRYKSLVEKE 561

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
               I CLRTDRGGEF S EF++FC  NGI+RQ  AAYTPQQNGVA+R+NRTVMN+VRS+
Sbjct: 562 IGFPICCLRTDRGGEFTSNEFNEFCQSNGIKRQLTAAYTPQQNGVAERRNRTVMNLVRSI 621

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           LSE K+PK FWPEAV    +VLNR P  +++D+TPE+A
Sbjct: 622 LSEKKIPKSFWPEAVNWVTHVLNRSPTQAVQDVTPEEA 659



 Score = 61.6 bits (148), Expect(2) = 3e-63
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLGSVKNLK 48
           KP+V Y RVFGC+AH+H+PDA+R K+D+KS +C+ LG  +  K
Sbjct: 664 KPNVGYFRVFGCVAHVHIPDAKRTKLDDKSCKCVLLGVSEETK 706


>dbj|GAU49517.1| hypothetical protein TSUD_300440 [Trifolium subterraneum]
          Length = 909

 Score =  207 bits (526), Expect(3) = 3e-63
 Identities = 95/158 (60%), Positives = 125/158 (79%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           KLELIHS+ICG+I+P SN   +YFI+F DD T   W Y L +K  A   FKKFK ++EKE
Sbjct: 381 KLELIHSDICGSINPTSNGGSKYFITFTDDLTRKTWTYPLKDKASAFECFKKFKALVEKE 440

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           + C++ CLRTDRGGEF S  F++FCSE+GI+RQ  AAYTPQQNGV++RKNRT++NMVRS+
Sbjct: 441 SDCLVKCLRTDRGGEFTSSNFNEFCSEHGIKRQLTAAYTPQQNGVSKRKNRTLLNMVRSM 500

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEKA 191
           ++   +PK+FWPEAV  + YV+NR P +S+KD+TPE+A
Sbjct: 501 IAGKGVPKRFWPEAVVWATYVINRSPTLSVKDVTPEEA 538



 Score = 51.6 bits (122), Expect(3) = 3e-63
 Identities = 18/37 (48%), Positives = 31/37 (83%)
 Frame = -2

Query: 176 KPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLG 66
           KPSV++ ++FGCI ++H+P+AQR+K+D K ++ + LG
Sbjct: 543 KPSVSHFKIFGCIGYVHIPEAQRKKLDPKGIKFVHLG 579



 Score = 33.1 bits (74), Expect(3) = 3e-63
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -1

Query: 84  KMHFLRISEESKAYRLHDTIKKKITIS 4
           K   L +SEESKAY+L+D ++KKI I+
Sbjct: 574 KFVHLGVSEESKAYKLYDPLQKKIIIT 600


>dbj|GAU42405.1| hypothetical protein TSUD_324600 [Trifolium subterraneum]
          Length = 1302

 Score =  208 bits (530), Expect(2) = 4e-63
 Identities = 98/157 (62%), Positives = 122/157 (77%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           +LELIHS+ICG I+P SNS+KRY ++FIDD++   WVY+LS K  A   FKKFK M+EKE
Sbjct: 483 RLELIHSDICGPITPVSNSNKRYVLTFIDDYSRKIWVYYLSNKSDAFECFKKFKCMVEKE 542

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           T   I CLRTDRGGEFNS EF +FC  NGI+RQ  AAYTPQQNG+A+RKNRT+M M+R +
Sbjct: 543 TSETICCLRTDRGGEFNSDEFKEFCEVNGIKRQLTAAYTPQQNGIAERKNRTIMEMIRCM 602

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEK 194
           L+   +PK FWPEAV  + YVLNR P  ++KD+TPE+
Sbjct: 603 LAGKSVPKAFWPEAVNWAIYVLNRSPTAAIKDMTPEE 639



 Score = 61.6 bits (148), Expect(2) = 4e-63
 Identities = 24/50 (48%), Positives = 37/50 (74%)
 Frame = -2

Query: 197 ESMQNERKPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLGSVKNLK 48
           E + +  KPSV + ++FGCIA+ H PDAQR+K+D+KS++C+F G  +  K
Sbjct: 638 EEVWSSTKPSVKHFKIFGCIAYAHAPDAQRKKLDDKSVKCVFFGISEETK 687


>dbj|GAU16533.1| hypothetical protein TSUD_167640 [Trifolium subterraneum]
          Length = 1103

 Score =  207 bits (526), Expect(2) = 4e-63
 Identities = 97/157 (61%), Positives = 121/157 (77%)
 Frame = -3

Query: 664 KLELIHSNICGTISPKSNSHKRYFISFIDDFT*MGWVYFLSEKLVAL*TFKKFKIMIEKE 485
           +LELIHS+ICG I+P SNS+KRY ++FIDD++   W Y+LS K  A   FKKFK M+EKE
Sbjct: 483 RLELIHSDICGPITPVSNSNKRYVLTFIDDYSRKIWAYYLSNKSDAFECFKKFKCMVEKE 542

Query: 484 T*CVISCLRTDRGGEFNSKEFDKFCSENGIRRQFRAAYTPQQNGVAQRKNRTVMNMVRSL 305
           T   I CLRTDRGGEFNS EF +FC  NGI+RQ  AAYTPQQNG+A+RKNRT+M M+R +
Sbjct: 543 TSETICCLRTDRGGEFNSDEFKEFCEVNGIKRQLTAAYTPQQNGIAERKNRTIMEMIRCM 602

Query: 304 LSEAKLPKQFWPEAVRLSFYVLNRCPAVSLKDITPEK 194
           L+   +PK FWPEAV  + YVLNR P  ++KD+TPE+
Sbjct: 603 LAGKSVPKAFWPEAVNWAIYVLNRSPTAAIKDMTPEE 639



 Score = 63.2 bits (152), Expect(2) = 4e-63
 Identities = 25/50 (50%), Positives = 38/50 (76%)
 Frame = -2

Query: 197 ESMQNERKPSVTYLRVFGCIAHMHVPDAQRRKMDNKSLRCIFLGSVKNLK 48
           E + +  KPSV + ++FGCIA+ HVPDAQR+K+D+KS++C+F G  +  K
Sbjct: 638 EEVWSSTKPSVKHFKIFGCIAYAHVPDAQRKKLDDKSVKCVFFGISEETK 687