BLASTX nr result

ID: Astragalus22_contig00029017 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00029017
         (335 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012574162.1| PREDICTED: pentatricopeptide repeat-containi...    54   4e-06
ref|XP_003604256.2| PPR containing plant-like protein [Medicago ...    54   8e-06

>ref|XP_012574162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g38010
           [Cicer arietinum]
          Length = 587

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = +3

Query: 189 VNYVRHSLKWVLLDFIKRCNDFRSFKQIHA 278
           +N   HSLKWVLLDFI+RCND RSFKQIHA
Sbjct: 1   MNKGTHSLKWVLLDFIQRCNDLRSFKQIHA 30


>ref|XP_003604256.2| PPR containing plant-like protein [Medicago truncatula]
 gb|AES86453.2| PPR containing plant-like protein [Medicago truncatula]
          Length = 595

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +3

Query: 189 VNYVRHSLKWVLLDFIKRCNDFRSFKQIHA 278
           +N   HS+KWVLLDFI+RCND RSFKQIHA
Sbjct: 1   MNKGTHSMKWVLLDFIQRCNDLRSFKQIHA 30


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