BLASTX nr result
ID: Astragalus22_contig00028988
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus22_contig00028988
(616 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNY15498.1| ribonuclease H [Trifolium pratense] 105 2e-23
dbj|GAU50328.1| hypothetical protein TSUD_290640 [Trifolium subt... 104 1e-22
dbj|GAU51253.1| hypothetical protein TSUD_412460, partial [Trifo... 104 2e-22
gb|PNX81608.1| ribonuclease H [Trifolium pratense] 98 4e-20
gb|PNY01766.1| ribonuclease H [Trifolium pratense] 94 2e-19
gb|PNY12120.1| 3-ketoacyl-CoA synthase, partial [Trifolium prate... 94 8e-19
gb|PNY03121.1| ribonuclease H, partial [Trifolium pratense] 94 9e-19
gb|PNX84687.1| ribonuclease H [Trifolium pratense] 90 3e-18
dbj|GAU19541.1| hypothetical protein TSUD_303540 [Trifolium subt... 93 3e-18
gb|PNX88162.1| hypothetical protein L195_g044263 [Trifolium prat... 92 4e-18
gb|PNY12420.1| ribonuclease H [Trifolium pratense] 92 4e-18
gb|PNX94788.1| ribonuclease H [Trifolium pratense] 90 2e-17
dbj|GAU43243.1| hypothetical protein TSUD_241340 [Trifolium subt... 89 3e-17
dbj|GAU25543.1| hypothetical protein TSUD_259770 [Trifolium subt... 90 3e-17
gb|PNX68268.1| ribonuclease H, partial [Trifolium pratense] 85 8e-17
dbj|GAU46467.1| hypothetical protein TSUD_402340 [Trifolium subt... 87 9e-17
gb|PNY10278.1| ribonuclease H [Trifolium pratense] 87 1e-16
gb|PNX97265.1| ribonuclease H, partial [Trifolium pratense] 88 2e-16
gb|PNY06537.1| ribonuclease H, partial [Trifolium pratense] 85 2e-15
dbj|GAU10071.1| hypothetical protein TSUD_422240 [Trifolium subt... 83 3e-15
>gb|PNY15498.1| ribonuclease H [Trifolium pratense]
Length = 378
Score = 105 bits (263), Expect = 2e-23
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNR- 178
+HLG P+C+ C ET HV+RD P A + ++++ N+ +
Sbjct: 80 MHLGYPYCRRCSLQVETISHVMRDCPIARVVWMHIV----------PHKLRRNFFNTGKD 129
Query: 179 ---ALGGVFEW------KWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDY 331
A ++ W KW A+W ACH LW+WRN+E H + +RP W + KDY
Sbjct: 130 VWIAQNVLYNWENNDGIKWNALWAIACHYLWLWRNKETHDSNVSRPPEAWVWIRKIAKDY 189
Query: 332 AVGNSRNNSRKPSLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIE-IVW 508
+ + + ++ +K PP GW+K+ ++ E +
Sbjct: 190 KIATAMAEELQKGVRTQIQVKWQPPSIGWVKVNTDGASKSDGSASCGGLIRGSDCEWLGG 249
Query: 509 FLKEFREL*CLCDELWGVYEGLKLARSRGYMKIEL 613
F K + ELWGV EGLKLAR RG+ +IEL
Sbjct: 250 FSKHIGRCTSVVAELWGVSEGLKLARDRGFQRIEL 284
>dbj|GAU50328.1| hypothetical protein TSUD_290640 [Trifolium subterraneum]
Length = 474
Score = 104 bits (260), Expect = 1e-22
Identities = 62/205 (30%), Positives = 90/205 (43%), Gaps = 1/205 (0%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRA 181
+H+G+P+C +C +I E TLHVLRD P A ++ NL+ N +
Sbjct: 231 MHIGEPWCTHCVDIVEDTLHVLRDCPLAKSVWCNLLNNAARENSFAAELKDWIHMNLQQD 290
Query: 182 LGGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSR 361
LG +W +W +CH LW WRNRE H RP PW+ +L Y N N +
Sbjct: 291 LGRNMHMEWYGVWATSCHSLWTWRNRETHDETRLRPIHPWRYILDCHLQYMAANVNNIAL 350
Query: 362 KPSLQVMKMIKSVPPWFGWIKLTLMEVTR-EIKXXXXXXXXXXXQIEIVWFLKEFREL*C 538
Q+ I P GW+ L ++ ++ I F +
Sbjct: 351 STRQQMEVDIAWQQPEAGWVVLNTDGASKMDVAAGCGGLLRNSHGQWIGGFSRHLGICSA 410
Query: 539 LCDELWGVYEGLKLARSRGYMKIEL 613
ELWGV +GL+LAR RG K+++
Sbjct: 411 YLAELWGVLDGLRLARERGITKLKV 435
>dbj|GAU51253.1| hypothetical protein TSUD_412460, partial [Trifolium subterraneum]
Length = 609
Score = 104 bits (260), Expect = 2e-22
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Frame = +2
Query: 5 HLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRAL 184
+L DP+C YCE++ ETTLHVLRD P A + +L+ + N + ++
Sbjct: 321 NLTDPYCSYCEHMEETTLHVLRDCPLAVEVWQHLLEEEHRGRFFIGQLHQWIDLNLSTSI 380
Query: 185 GGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSRK 364
G + W A+WV C LW WRN+ H ++T + PW +L +Y + K
Sbjct: 381 GIRRDLDWDAVWVTTCFWLWKWRNKRVHEPNHTSQWKPWSFILNLVNEYKYTKQARETEK 440
Query: 365 PSLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQ--IEIVWFLKEFREL*C 538
P + +K IK + P GW+ L + I I F K
Sbjct: 441 PCQKELKDIKWIYPAKGWVCLNTDGAAKSDTGIAGCGGILRNDNGIWICGFSKFLGNTSA 500
Query: 539 LCDELWGVYEGLKLARSRGYMKIEL 613
E+WG+YEGL +AR+ G ++E+
Sbjct: 501 YMAEVWGLYEGLSMARNLGIERLEV 525
>gb|PNX81608.1| ribonuclease H [Trifolium pratense]
Length = 630
Score = 98.2 bits (243), Expect = 4e-20
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 1/205 (0%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRA 181
+H+ +P+C +C ++ E TLHVLRD P A ++ NL+ + N +
Sbjct: 332 MHISEPWCNHCVDVVEDTLHVLRDCPLAKSVWCNLLNGKDKDWFFTAALDEWIILNMKKQ 391
Query: 182 LGGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSR 361
LG W ++W +CH LW+WRNRE HG RP PW+ +L Y +
Sbjct: 392 LGRDNNLSWASVWATSCHFLWLWRNRETHGDSRLRPLQPWKLILKWVMQYFEADVSGIVI 451
Query: 362 KPSLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIE-IVWFLKEFREL*C 538
+V + P GW+ L +R + + + F +
Sbjct: 452 ANRQKVEITVTWQCPEDGWLSLNTDGASRGHTSAGCGGLLRNSEGQWLGGFSRNLGRCNA 511
Query: 539 LCDELWGVYEGLKLARSRGYMKIEL 613
ELWGV++GL LAR +G K+++
Sbjct: 512 YIAELWGVHDGLCLARDKGAKKLKV 536
>gb|PNY01766.1| ribonuclease H [Trifolium pratense]
Length = 300
Score = 94.0 bits (232), Expect = 2e-19
Identities = 67/208 (32%), Positives = 92/208 (44%), Gaps = 3/208 (1%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRA 181
+H+G+P+C C N+ ETTL VLRD P A I +N + N N+
Sbjct: 38 VHIGEPYCYRCGNVMETTLRVLRDCPLAMVIWLNAVNLQQCEAFFTVDLSDWIKINFNQQ 97
Query: 182 LGGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSR 361
KW W ACH LW WRN+ H D+ P PW + + YA N N S
Sbjct: 98 -------KWVNFWAKACHALWTWRNKLIHDDDFIMPNRPWLEISRRVQHYA--NQINVSS 148
Query: 362 KPSL--QVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQ-IEIVWFLKEFREL 532
L +VM I+ P GW+K+ ++ + V LK + +
Sbjct: 149 TVDLRNKVMTDIR-WPADPGWVKINTNGASKGGGVAGCGGVIRGEMVVGCVALLKVWVFV 207
Query: 533 *CLCDELWGVYEGLKLARSRGYMKIELD 616
ELWGV EGL+L R+RGY+ EL+
Sbjct: 208 VPYVAELWGVLEGLQLVRARGYLHFELN 235
>gb|PNY12120.1| 3-ketoacyl-CoA synthase, partial [Trifolium pratense]
Length = 609
Score = 94.4 bits (233), Expect = 8e-19
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 1/205 (0%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRA 181
+H+G P+C +C++ ETTLHVLRD P A I VN + N N+
Sbjct: 163 MHIGTPYCHHCQSTIETTLHVLRDCPLAMIIWVNSVDVQIQNQFFDTDLNDWIELNINKP 222
Query: 182 LGGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSR 361
+W W CH LW WRN+ H + P PW+ + T+ Y + +S ++
Sbjct: 223 -------RWVQFWATGCHALWTWRNKLIHDESFIMPLQPWKEIHRSTQLYEMHSSVQSTV 275
Query: 362 KPSLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIE-IVWFLKEFREL*C 538
+V+ ++ +P GW+++ ++ + I F K
Sbjct: 276 NLVERVVTNVRWLPLEPGWVRINTDGASKGDEVAGCGGMIKGEDGSWICGFTKGVGVCSA 335
Query: 539 LCDELWGVYEGLKLARSRGYMKIEL 613
ELWGV E L++AR+RG+ ++EL
Sbjct: 336 YVAELWGVLEALQIARARGFRQVEL 360
>gb|PNY03121.1| ribonuclease H, partial [Trifolium pratense]
Length = 952
Score = 94.4 bits (233), Expect = 9e-19
Identities = 61/204 (29%), Positives = 86/204 (42%), Gaps = 1/204 (0%)
Frame = +2
Query: 8 LGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRALG 187
L C YC ++ ETTLHV+RD P+A I +I N ++
Sbjct: 677 LSHAMCHYCGDVEETTLHVMRDCPKAMEIWAVVIPVQEKGKYMIGDLKQWVCYNLQNSIT 736
Query: 188 GVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSRKP 367
+ WR W ACH LW WRN+E H DY RP P VL + +Y + N+
Sbjct: 737 WSGKGSWRDYWAQACHCLWFWRNKELHDEDYMRPINPAHQVLKQRWEYIAAATNNSVVLE 796
Query: 368 SLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIE-IVWFLKEFREL*CLC 544
+ ++ I PP ++KL +E K + E + F K
Sbjct: 797 RTKEVRWIGWRPPKPNFVKLNTDGAYKENKAAGCGGVIRGSEGEWMGGFAKGVGLCSAFV 856
Query: 545 DELWGVYEGLKLARSRGYMKIELD 616
ELWGV EGL+ G +K+EL+
Sbjct: 857 AELWGVLEGLRYVHRMGLVKVELN 880
>gb|PNX84687.1| ribonuclease H [Trifolium pratense]
Length = 245
Score = 89.7 bits (221), Expect = 3e-18
Identities = 63/207 (30%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Frame = +2
Query: 8 LGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRALG 187
L C+YC + ETTLHV+RD P+A + ++ N N
Sbjct: 3 LSHAMCEYCGDKEETTLHVMRDCPKAREVWTYVVPXSLRGIFFMGDLQHWIGFNLNNNSQ 62
Query: 188 GVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSRKP 367
W W +CH LW+WRN+E H D+ RP P + +L ++DY N+
Sbjct: 63 WRGRXDWXDFWALSCHCLWMWRNKECHDADFVRPHRPVRHILQLSEDYRNAVLNNSVALA 122
Query: 368 SLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIEIVWFLKEFREL*CLCD 547
QV+ MI PP +IKL ++ + Q E +L F + LC
Sbjct: 123 RNQVVTMIGWSPPKPLFIKLKTDGAYKDRQVAGCGGVLRGCQGE---WLGSFAKWVGLCS 179
Query: 548 ----ELWGVYEGLKLARSRGYMKIELD 616
ELWGV EGL+ A G+ K+EL+
Sbjct: 180 AFIAELWGVVEGLRYAHQLGFRKVELN 206
>dbj|GAU19541.1| hypothetical protein TSUD_303540 [Trifolium subterraneum]
Length = 642
Score = 92.8 bits (229), Expect = 3e-18
Identities = 61/204 (29%), Positives = 86/204 (42%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRA 181
+ L +P+C +C +I E T+HVLRD P A + NL+ N ++
Sbjct: 348 MQLCEPWCNHCIDIVEDTMHVLRDCPLAKVVWSNLLNDTARYSFYHTNLEDWICMNLHKE 407
Query: 182 LGGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSR 361
LG +W +W CH LW+WRNRE HG RP WQT+L + Y + ++ +
Sbjct: 408 LGKETNVRWSCVWAVGCHVLWLWRNRECHGDMRVRPTQLWQTILYMVQQYKQADIKSIAL 467
Query: 362 KPSLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIEIVWFLKEFREL*CL 541
+V I P WIKL +R + F +
Sbjct: 468 PVHQKVEVPIGWNKPAGDWIKLNTDGASRPRCGGLLRNSNGQW---LGGFSRHLGRCNAY 524
Query: 542 CDELWGVYEGLKLARSRGYMKIEL 613
ELWGV +GL RG+ KIEL
Sbjct: 525 LAELWGVLDGLNFTYERGHKKIEL 548
>gb|PNX88162.1| hypothetical protein L195_g044263 [Trifolium pratense]
Length = 414
Score = 91.7 bits (226), Expect = 4e-18
Identities = 45/140 (32%), Positives = 70/140 (50%)
Frame = +2
Query: 8 LGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRALG 187
LG C +C + ET LHV+RD P + +NL+ N N +
Sbjct: 268 LGSSMCDFCGDQVETILHVMRDCPLVMPLWLNLVHSNMRRNFCTGYTQQWIDFNLNVDVR 327
Query: 188 GVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSRKP 367
G F+ +W++IW +CH W WRN+E+HG ++ RP P V+ ++Y V + +
Sbjct: 328 GQFDVEWKSIWAISCHFAWSWRNKEKHGLNFIRPIAPTMVVMNVVRNYVVADDVLHIDME 387
Query: 368 SLQVMKMIKSVPPWFGWIKL 427
S +V K+I PP GW++L
Sbjct: 388 SRKVEKLISWKPPPVGWVRL 407
>gb|PNY12420.1| ribonuclease H [Trifolium pratense]
Length = 1341
Score = 92.4 bits (228), Expect = 4e-18
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Frame = +2
Query: 8 LGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRALG 187
LG C YC ++ ET +HV+RD P+A I V ++ + N ++
Sbjct: 1045 LGHAMCNYCGDVVETAIHVMRDCPKAMQIWVTVVPANDRGSFLMGNVKNWVCFNLQNSVT 1104
Query: 188 GVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSRKP 367
+WR W ACH LW WRN++ H D+ RP P Q V+ DY + NN
Sbjct: 1105 WDRRGQWREYWAQACHCLWFWRNKDIHDEDFVRPTRPVQQVMKLLGDYMHAFNNNNVVLE 1164
Query: 368 SLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIEIVWFLKEFREL*CLCD 547
+ ++ I PP ++KL +E + + E +L + + LC
Sbjct: 1165 RTRSIRWIGWSPPKMNFVKLNTDGAYKENRAAGCGGVIRGCEGE---WLGGYAKGVGLCS 1221
Query: 548 ----ELWGVYEGLKLARSRGYMKIELD 616
ELWGV EGL+ G+ +EL+
Sbjct: 1222 AFVAELWGVLEGLRYVHHIGFTMVELN 1248
>gb|PNX94788.1| ribonuclease H [Trifolium pratense]
Length = 509
Score = 90.1 bits (222), Expect = 2e-17
Identities = 62/212 (29%), Positives = 88/212 (41%), Gaps = 10/212 (4%)
Frame = +2
Query: 8 LGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRALG 187
+G+ +C C E+T+HV+RD P+A + +LI N N G
Sbjct: 211 IGNSYCDSCTQFEESTIHVVRDCPRAVHLWRHLISNQERGYFFVIEFDEWIHLNLNNKFG 270
Query: 188 GVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDY--------AVGN 343
+ W+AIW C+ LW+WRN+ H ++ P PWQ V+ Y VG+
Sbjct: 271 QNYGNDWKAIWATTCYLLWLWRNKSIHDDEFVIPERPWQVVMDYVAAYKHSMLTEEQVGH 330
Query: 344 SRNNSRKPSLQVMKMIKSVPPWFGWIKLTLMEVTR--EIKXXXXXXXXXXXQIEIVWFLK 517
R +Q I + P GW L + E K I F K
Sbjct: 331 GR-------VQQQVDITWLAPPPGWFALNSDGAAKLSESKAGCGGVLRNENGNWIEGFTK 383
Query: 518 EFREL*CLCDELWGVYEGLKLARSRGYMKIEL 613
+ ELWG+YEGL+LA+ R MK+EL
Sbjct: 384 ALGDTTAYMAELWGIYEGLRLAQRRDVMKLEL 415
>dbj|GAU43243.1| hypothetical protein TSUD_241340 [Trifolium subterraneum]
Length = 371
Score = 89.0 bits (219), Expect = 3e-17
Identities = 61/192 (31%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
Frame = +2
Query: 8 LGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRALG 187
LG C YC +I E TLH LRD PQ I +NL+ N + +G
Sbjct: 175 LGSAMCDYCGSIIEDTLHALRDCPQTMPIWLNLVNEHARANFFNGDLFYWINYNMSNYMG 234
Query: 188 GVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRN-NSRK 364
+W+ +WV ACH LW WRN+E+H ++RP V+ + K Y + N
Sbjct: 235 KYNGVEWKIMWVVACHQLWFWRNKEKHEESFSRPSNAVLHVMNQVKYYQDADCENVIVVS 294
Query: 365 PSLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIE-IVWFLKEFREL*CL 541
P+ +V+ + PP GW+KL R+ + E I F K
Sbjct: 295 PTREVVMVGWKYPP-SGWVKLNTDGSCRKDGRSGCGGVIRGSEGEWIGGFAKFVGRSNVY 353
Query: 542 CDELWGVYEGLK 577
ELWGV+EGLK
Sbjct: 354 VAELWGVFEGLK 365
>dbj|GAU25543.1| hypothetical protein TSUD_259770 [Trifolium subterraneum]
Length = 633
Score = 89.7 bits (221), Expect = 3e-17
Identities = 63/203 (31%), Positives = 85/203 (41%), Gaps = 1/203 (0%)
Frame = +2
Query: 8 LGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRALG 187
L C YC + ETTLHVLRD A I +++ N N +
Sbjct: 342 LSHAMCSYCRVVEETTLHVLRDCTLAKKIWSHVV-----PLASRSGLQEWICFNLNNFVM 396
Query: 188 GVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSRKP 367
G+ E W W AC+ LW WRN+E H + RP P Q V DY ++
Sbjct: 397 GICEGTWNVFWAMACYLLWNWRNKELHVEGFLRPNRPVQHVRNMAADYIHAMQNSSIMVN 456
Query: 368 SLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIE-IVWFLKEFREL*CLC 544
QV I VPP +IKL +++++ Q E I + K
Sbjct: 457 RSQVASRIGWVPPRADYIKLNTDGASKKMQLAGCGGVVRGSQGEWIGGYAKCVGMCNAFV 516
Query: 545 DELWGVYEGLKLARSRGYMKIEL 613
ELWGV EGL+ R+ G+ K+EL
Sbjct: 517 AELWGVLEGLRFVRNMGFRKVEL 539
>gb|PNX68268.1| ribonuclease H, partial [Trifolium pratense]
Length = 194
Score = 84.7 bits (208), Expect = 8e-17
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 1/194 (0%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRA 181
+H+G P+C +C +I E T HVL D P A ++ +L+ N ++
Sbjct: 1 MHIGAPWCNHCVDIVEDTSHVLHDCPLAKSVWCSLLTNDVRNMFFTVNIKECVRINLHQN 60
Query: 182 LGGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSR 361
LG W ++W C+ LW+WRNRE HG RP PW +L Y + + +
Sbjct: 61 LGRSMNRSWPSVWATGCYFLWMWRNREAHGDTRLRPAQPWNFILNWVDQYKRADVNDITS 120
Query: 362 KPSLQVMKMIKSVPPWFGWIKLTLMEVTRE-IKXXXXXXXXXXXQIEIVWFLKEFREL*C 538
+ + I P GWI L ++ + I F +
Sbjct: 121 GTEHKTLVNIAWQRPEDGWILLNTDGASKNGVTSGCGGILRNSHGQWISGFSRNLGRCNA 180
Query: 539 LCDELWGVYEGLKL 580
ELWGV++GL+L
Sbjct: 181 YLAELWGVFDGLRL 194
>dbj|GAU46467.1| hypothetical protein TSUD_402340 [Trifolium subterraneum]
Length = 299
Score = 86.7 bits (213), Expect = 9e-17
Identities = 63/209 (30%), Positives = 88/209 (42%), Gaps = 4/209 (1%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRA 181
+ + C +C ET+LHVLRD A I + ++ N +
Sbjct: 1 MRIAHMMCDHCRVFEETSLHVLRDCDVAKEIWMVVVPRSVRSAFFGGDLSHWFSINLDGE 60
Query: 182 LGGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDY--AVGNSRNN 355
L G+ + W W C+ LW WRNRE H +TRP P Q ++ ++Y A SR
Sbjct: 61 LVGINDINWPEFWATVCYFLWNWRNREYHDNSFTRPVQPVQVIMQRCREYKLAARASRVV 120
Query: 356 SRKPSLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIE--IVWFLKEFRE 529
+ P + V MI PP GW+KL + R+ + I I F K
Sbjct: 121 TSVPRINV--MIGWEPPSQGWVKLN-TDGARKNERVAGCGGIIRNNIGDWIGGFAKHVGS 177
Query: 530 L*CLCDELWGVYEGLKLARSRGYMKIELD 616
ELWGV EGL A G+ K+EL+
Sbjct: 178 CSAFVAELWGVLEGLNYAWKLGFKKVELE 206
>gb|PNY10278.1| ribonuclease H [Trifolium pratense]
Length = 374
Score = 87.4 bits (215), Expect = 1e-16
Identities = 45/140 (32%), Positives = 71/140 (50%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRA 181
++LG PFC +CE+ ET LHVLRD ++ + +N++ + N +
Sbjct: 208 MNLGLPFCTFCEDEIETELHVLRDCSKSMQVWLNIVHDSSREVFFNADFQQWINMNLHGD 267
Query: 182 LGGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSR 361
+ GV W++ W ACH LW WRN+E+H + RP+ P + +Y N +++
Sbjct: 268 IQGVDVNNWQSYWAIACHALWTWRNKEKHYDCFNRPYRPHLVIKQYMTEYEKSNQVDHNV 327
Query: 362 KPSLQVMKMIKSVPPWFGWI 421
L+VM+ I PP GWI
Sbjct: 328 VVLLRVMRQIGWCPPSEGWI 347
>gb|PNX97265.1| ribonuclease H, partial [Trifolium pratense]
Length = 1220
Score = 87.8 bits (216), Expect = 2e-16
Identities = 41/117 (35%), Positives = 57/117 (48%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRA 181
+H+G+P+C +C +I E TLHVLRD P A ++ NL+ N +
Sbjct: 1103 MHIGEPWCTHCVDIXEDTLHVLRDCPLAKSVWCNLLNNAAREKFFAAELKTWIHMNLQQD 1162
Query: 182 LGGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRN 352
LG +W ++W +CH LW WRNRE H RP PW+ +L Y N N
Sbjct: 1163 LGRNMHMEWSSVWATSCHSLWTWRNRETHDETRLRPIHPWRYILDCHLQYMAANVNN 1219
>gb|PNY06537.1| ribonuclease H, partial [Trifolium pratense]
Length = 1770
Score = 84.7 bits (208), Expect = 2e-15
Identities = 43/140 (30%), Positives = 70/140 (50%)
Frame = +2
Query: 2 LHLGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRA 181
++LG PFC +CE+ ET LHVLRD ++ + +N++ + N +
Sbjct: 1583 MNLGLPFCTFCEDEIETELHVLRDCSKSMQVWLNIVHDSSREVFFNADFQQWINMNLHGD 1642
Query: 182 LGGVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSR 361
+ GV W++ W ACH LW WRN+E+H + RP+ P + +Y + +++
Sbjct: 1643 IQGVDVNNWQSYWAIACHALWTWRNKEKHDDSFNRPYRPHLVIKQYMTEYEKSSQVDHNV 1702
Query: 362 KPSLQVMKMIKSVPPWFGWI 421
+VM+ I PP GWI
Sbjct: 1703 VVLPRVMRQIGWCPPSEGWI 1722
>dbj|GAU10071.1| hypothetical protein TSUD_422240 [Trifolium subterraneum]
Length = 306
Score = 82.8 bits (203), Expect = 3e-15
Identities = 57/204 (27%), Positives = 80/204 (39%), Gaps = 1/204 (0%)
Frame = +2
Query: 8 LGDPFCKYCENIPETTLHVLRDYPQAWAI*VNLIIP*NXXXXXXXXXXXXXXXNSNRALG 187
LG C +C N+ ET++HV+RD + ++ N N
Sbjct: 37 LGHAMCNHCGNVVETSMHVMRDCSLVTPFWLQVVPMRERSTFFTEDLQQWIITNINTGRR 96
Query: 188 GVFEWKWRAIWVNACHDLWIWRNREEHGGDYTRPFGPWQTVLTETKDYAVGNSRNNSRKP 367
G W IW ACH LW WRN+E H +Y RP Q V +DY+ N +
Sbjct: 97 GNNGSAWCDIWATACHCLWTWRNKEMHDNNYVRPSHMVQHVYKIVEDYSQARRVNELMRN 156
Query: 368 SLQVMKMIKSVPPWFGWIKLTLMEVTREIKXXXXXXXXXXXQIE-IVWFLKEFREL*CLC 544
S + I PP ++KL ++ E + F K
Sbjct: 157 SERFFTQIGWQPPCGHFVKLNTDGACKDNNIAGCGGIIRGAHGEWLGGFAKGVGVCSAFA 216
Query: 545 DELWGVYEGLKLARSRGYMKIELD 616
ELWGV EGL+ AR G+ +EL+
Sbjct: 217 AELWGVLEGLQYARRLGFTAVELN 240