BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00027307
         (318 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN09398.1| RNA polymerase-associated protein RTF1 like [Glyc...    56   7e-07
ref|XP_003521320.1| PREDICTED: protein RTF1 homolog [Glycine max...    56   7e-07
gb|PNX92921.1| RNA polymerase-associated protein RTF1 [Trifolium...    54   6e-06
ref|XP_003625428.1| RNA polymerase-associated RTF1-like protein ...    53   9e-06

>gb|KHN09398.1| RNA polymerase-associated protein RTF1 like [Glycine soja]
          Length = 641

 Score = 56.2 bits (134), Expect = 7e-07
 Identities = 39/82 (47%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
 Frame = +1

Query: 1   IASKREKGKKKETVSRSETXXXXXXXXXXXXXXXXXXXXKDGALNELRAKRLKQQDPEAK 180
           IASKREKGKK  TV+  +T                    KDGALNELRAKRLKQQD EA 
Sbjct: 138 IASKREKGKK--TVAGKQTSPLPPSRVRSSARSADRSTAKDGALNELRAKRLKQQDSEAN 195

Query: 181 R----------TGGVLPKGKPF 216
           R           G   PK KPF
Sbjct: 196 RRPSEASRSSGPGHFSPKHKPF 217


>ref|XP_003521320.1| PREDICTED: protein RTF1 homolog [Glycine max]
 gb|KRH67488.1| hypothetical protein GLYMA_03G168800 [Glycine max]
          Length = 644

 Score = 56.2 bits (134), Expect = 7e-07
 Identities = 39/82 (47%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
 Frame = +1

Query: 1   IASKREKGKKKETVSRSETXXXXXXXXXXXXXXXXXXXXKDGALNELRAKRLKQQDPEAK 180
           IASKREKGKK  TV+  +T                    KDGALNELRAKRLKQQD EA 
Sbjct: 138 IASKREKGKK--TVAGKQTSPLPPSRVRSSARSADRSTAKDGALNELRAKRLKQQDSEAN 195

Query: 181 R----------TGGVLPKGKPF 216
           R           G   PK KPF
Sbjct: 196 RRPSEASRSSGPGHFSPKHKPF 217


>gb|PNX92921.1| RNA polymerase-associated protein RTF1 [Trifolium pratense]
          Length = 626

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 31/61 (50%), Positives = 32/61 (52%)
 Frame = +1

Query: 1   IASKREKGKKKETVSRSETXXXXXXXXXXXXXXXXXXXXKDGALNELRAKRLKQQDPEAK 180
           IASKREK K+     R                       KDGALNELRAKRLKQQDPEAK
Sbjct: 123 IASKREKEKRASVSRRESPPPIMSSRVRTSARSADRSAAKDGALNELRAKRLKQQDPEAK 182

Query: 181 R 183
           R
Sbjct: 183 R 183


>ref|XP_003625428.1| RNA polymerase-associated RTF1-like protein [Medicago truncatula]
 gb|AES81646.1| RNA polymerase-associated RTF1-like protein [Medicago truncatula]
          Length = 624

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 39/81 (48%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
 Frame = +1

Query: 1   IASKREKGKKKETVSRSETXXXXXXXXXXXXXXXXXXXXKDGALNELRAKRLKQQDPEAK 180
           IASKREKG     VSR ET                    KDGALNELRAKRLKQ+DPE +
Sbjct: 123 IASKREKGN----VSRRETPPLPSSRMMSSTRSYDRSAAKDGALNELRAKRLKQRDPETQ 178

Query: 181 RT---------GGVLPK-GKP 213
           R           GVL K GKP
Sbjct: 179 RELKEGSKSAGSGVLSKIGKP 199