BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00026396
         (508 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX81608.1| ribonuclease H [Trifolium pratense]                    130   3e-32
gb|PNX57873.1| hypothetical protein L195_g050625, partial [Trifo...   120   4e-31
gb|PNX97265.1| ribonuclease H, partial [Trifolium pratense]           125   4e-30
gb|PNY13536.1| ribonuclease H [Trifolium pratense]                    124   1e-29
dbj|GAU40831.1| hypothetical protein TSUD_287680 [Trifolium subt...   122   3e-29
gb|PNY06537.1| ribonuclease H, partial [Trifolium pratense]           122   4e-29
gb|PNX72990.1| ribonuclease H, partial [Trifolium pratense]           122   6e-29
gb|PNY15946.1| ribonuclease H, partial [Trifolium pratense]           122   6e-29
gb|PNY01940.1| ribonuclease H [Trifolium pratense]                    121   7e-29
gb|PNX79929.1| ribonuclease H, partial [Trifolium pratense]           121   8e-29
dbj|GAU19541.1| hypothetical protein TSUD_303540 [Trifolium subt...   121   9e-29
dbj|GAU14937.1| hypothetical protein TSUD_47300 [Trifolium subte...   112   2e-28
dbj|GAU45807.1| hypothetical protein TSUD_87100 [Trifolium subte...   120   3e-28
dbj|GAU31911.1| hypothetical protein TSUD_270960 [Trifolium subt...   119   5e-28
gb|PNX66290.1| hypothetical protein L195_g055006 [Trifolium prat...   113   6e-28
dbj|GAU35481.1| hypothetical protein TSUD_384360 [Trifolium subt...   119   7e-28
dbj|GAU10179.1| hypothetical protein TSUD_416550 [Trifolium subt...   118   9e-28
gb|PNY14273.1| ribonuclease H, partial [Trifolium pratense]           118   1e-27
gb|PNX91173.1| ribonuclease H, partial [Trifolium pratense]           115   1e-27
dbj|GAU26489.1| hypothetical protein TSUD_361220 [Trifolium subt...   117   1e-27

>gb|PNX81608.1| ribonuclease H [Trifolium pratense]
          Length = 630

 Score =  130 bits (328), Expect = 3e-32
 Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 15/157 (9%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINSV--MNKACLMKLGWDLRCN 145
           EIQK QRAFI           +V+W+ ++ PKA GGLGI  +  MNKACLMKL W +R  
Sbjct: 80  EIQKIQRAFIWGEENGERKYHAVSWDNITKPKAFGGLGIRRLVQMNKACLMKLAWSIRSG 139

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGPKF---ELWAIGDGTKVHAW 316
            + LW +V+ GKY+R +     +++K  DS+L KNL  +   F   E W IG+G+KV AW
Sbjct: 140 EEALWIDVIRGKYSRGNSNFNHVVSKSHDSNLWKNLVNIWNSFNLYEFWTIGNGSKVRAW 199

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGW 427
           DDKWL  +  I +  + IP   ++  V DL++ +GGW
Sbjct: 200 DDKWLYQDKSIQDFGIMIPESLKHMMVNDLVDTNGGW 236


>gb|PNX57873.1| hypothetical protein L195_g050625, partial [Trifolium pratense]
          Length = 183

 Score =  120 bits (300), Expect = 4e-31
 Identities = 67/150 (44%), Positives = 87/150 (58%), Gaps = 15/150 (10%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINSV--MNKACLMKLGWDLRCN 145
           EIQK QRAFI           +V+WE V+ PK  GGLGI  +  MNKACLMKLGW LR  
Sbjct: 13  EIQKIQRAFIWGDDESGRKYHAVSWENVTKPKVYGGLGIRRLVHMNKACLMKLGWALRNG 72

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGPKF---ELWAIGDGTKVHAW 316
            + LW +V+ GKY R++    L+ AK  DSSL KNL  +   F   E W++G+G  V AW
Sbjct: 73  EEALWIDVIRGKYDRNNSNFELIEAKVHDSSLWKNLVNVWSNFNSYEFWSVGNGNSVRAW 132

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADL 406
            D+WL     I EM + +P    +F + +L
Sbjct: 133 KDRWLDSGPSIEEMGIIVPENMNSFMIKEL 162


>gb|PNX97265.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1220

 Score =  125 bits (314), Expect = 4e-30
 Identities = 69/158 (43%), Positives = 93/158 (58%), Gaps = 15/158 (9%)
 Frame = +2

Query: 2    EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINSV--MNKACLMKLGWDLRCN 145
            EIQK QRAFI           +V+WE V+ PKA GGLG+  +  MNKACLMK+GW +R  
Sbjct: 851  EIQKIQRAFIWGDDNGGRKYHAVSWENVTLPKAYGGLGMRRLVQMNKACLMKMGWAIRSG 910

Query: 146  SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGPKFEL---WAIGDGTKVHAW 316
            +  LW EV+ GKY R++     ++AK  DSSL K+L +    F+L   W IG G  V AW
Sbjct: 911  ADALWIEVIKGKYDRENTNFEHVVAKAQDSSLWKSLVQTWHYFDLYGFWNIGKGDLVRAW 970

Query: 317  DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWN 430
             DKWL     I +M + +P   ++  V DL++ +G WN
Sbjct: 971  TDKWLFTGTSIKDMGITVPDNMQHLMVKDLVDVNGCWN 1008


>gb|PNY13536.1| ribonuclease H [Trifolium pratense]
          Length = 987

 Score =  124 bits (310), Expect = 1e-29
 Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 15/162 (9%)
 Frame = +2

Query: 2    EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINSV--MNKACLMKLGWDLRCN 145
            EIQK QR FI           +VNWE V+ PK +GGLGI  +  MNKACLMKL W +R  
Sbjct: 788  EIQKIQRGFIWGEENGGRKYHAVNWENVTKPKVLGGLGIRRLVHMNKACLMKLAWAIRSG 847

Query: 146  SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGPKF---ELWAIGDGTKVHAW 316
               +W +V+ GKY+R +     +++K  DSSL KNL  +   F   E W++G G  V AW
Sbjct: 848  ETAMWIDVIRGKYSRGNPSFDQVVSKTHDSSLWKNLVNIWGNFDIYEFWSLGKGNMVRAW 907

Query: 317  DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWNKLVL 442
            +DKWL     I +  L +P   +N  V+DL++ +G W   +L
Sbjct: 908  EDKWLFQGKSIQDFGLVVPDNLQNMMVSDLVDVNGSWRLDIL 949


>dbj|GAU40831.1| hypothetical protein TSUD_287680 [Trifolium subterraneum]
          Length = 529

 Score =  122 bits (305), Expect = 3e-29
 Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 15/158 (9%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINS--VMNKACLMKLGWDLRCN 145
           EI K QR FI           +V W+ +S P+ MGGLG+    VMN+ACLMKLGW  + N
Sbjct: 155 EIHKMQRQFIWGDTKNKRRFHAVGWDGISVPRWMGGLGLRKLEVMNQACLMKLGWKFQAN 214

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGP---KFELWAIGDGTKVHAW 316
           S+  WC VL GKY   S+ S  +  K + SSL K L +L P   ++  W++GDG K+ AW
Sbjct: 215 SEDYWCNVLRGKYENGSNVS--IGIKSSHSSLWKTLQKLKPTMNRYSYWSVGDGRKIDAW 272

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWN 430
           ++ WL   + I+E R+NIP       V +L+++DG WN
Sbjct: 273 NEAWLDDGVIINE-RVNIPPHLLGMKVIELVDSDGKWN 309


>gb|PNY06537.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1770

 Score =  122 bits (307), Expect = 4e-29
 Identities = 69/158 (43%), Positives = 91/158 (57%), Gaps = 15/158 (9%)
 Frame = +2

Query: 2    EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGIN--SVMNKACLMKLGWDLRCN 145
            E Q+ QR FI           +V+WE+ + PK++GGLG+    VMN+ACLMKLGWDL   
Sbjct: 1332 EAQRLQRGFIWGETSEGRKYHAVSWEIATKPKSLGGLGLRRLDVMNRACLMKLGWDLSRG 1391

Query: 146  SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGPKFELW---AIGDGTKVHAW 316
            S  +WC VL GKY R       + AK  DSSL KNL +L P  E     +IG+G   HAW
Sbjct: 1392 SNGMWCAVLRGKYGRGVTDMMKVSAKTADSSLWKNLVQLMPWIEAHYCRSIGNGRTTHAW 1451

Query: 317  DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWN 430
               W+   +R+ ++ +NIP    +  VADLI+A G WN
Sbjct: 1452 TVPWIDPGLRVMDLDVNIPDHVLHAKVADLIDARGCWN 1489


>gb|PNX72990.1| ribonuclease H, partial [Trifolium pratense]
          Length = 892

 Score =  122 bits (305), Expect = 6e-29
 Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 18/161 (11%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGIN--SVMNKACLMKLGWDLRCN 145
           EIQK QR FI           ++ WE V+ PK  GGLG+    VMN+AC++KLGW L   
Sbjct: 454 EIQKLQRNFIWGDKDGVKKYHAIGWEKVTKPKYCGGLGLRRLDVMNQACILKLGWKLASG 513

Query: 146 SQVLWCEVL*GKYARDSDCSRL---LIAKGTDSSLGKNLARLGPKFE---LWAIGDGTKV 307
           +  LWCEV+ GKY    DC  L   +  + T SSL K + +L PK +    WA+GDGT V
Sbjct: 514 ANDLWCEVVRGKY----DCRALKGEIDVQNTASSLWKYIVKLSPKLDNLCFWALGDGTDV 569

Query: 308 HAWDDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWN 430
            AW   W++  +R+ +   NIP E +N  V DL++ +G WN
Sbjct: 570 DAWRHAWIQEGMRVIDQINNIPEELQNIKVCDLVDDEGKWN 610


>gb|PNY15946.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1195

 Score =  122 bits (305), Expect = 6e-29
 Identities = 62/163 (38%), Positives = 99/163 (60%), Gaps = 15/163 (9%)
 Frame = +2

Query: 2    EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINSV--MNKACLMKLGWDLRCN 145
            ++QK QR+FI           +V+W+ ++ PK++GGLGI  +  MNKACLMKLGW ++  
Sbjct: 789  QLQKMQRSFIWGEAENERRYHAVSWDTITLPKSLGGLGIRRLHNMNKACLMKLGWSMKRG 848

Query: 146  SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLG---PKFELWAIGDGTKVHAW 316
               LW +VL GKYAR+      ++AK  DSSL K+L+ +     +F +W++G+G  V AW
Sbjct: 849  DSALWIDVLKGKYAREHPNLDSIVAKNHDSSLWKSLSAMWKELDEFTVWSVGNGELVQAW 908

Query: 317  DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWNKLVLK 445
             D+W+  +  I E+++ +P    +  V DL++  G WN  +L+
Sbjct: 909  KDRWIFVDKSIDELQVPVPENLNDMRVKDLVDEHGQWNYQMLQ 951


>gb|PNY01940.1| ribonuclease H [Trifolium pratense]
          Length = 556

 Score =  121 bits (303), Expect = 7e-29
 Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 15/158 (9%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINS--VMNKACLMKLGWDLRCN 145
           +I+K Q +FI           ++    +  PK +GGL I +  +MN ACLMKLGW+LR  
Sbjct: 369 DIEKIQCSFIWGDTENVKKLHTIGRNTMILPKYLGGLDIRNLRIMNDACLMKLGWNLRTK 428

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGP---KFELWAIGDGTKVHAW 316
            + LW +VL GKY RD + +  L+ K TDS+L K +A L P   + E WA+G+G+ ++ W
Sbjct: 429 KESLWTQVLWGKYVRDGNATTELVVKLTDSNLWKTIADLWPILIEHEYWAVGNGSSINFW 488

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWN 430
            DKWL  N RI ++   IP E R + V+D++  +G WN
Sbjct: 489 TDKWLDDNTRIGDLVSVIPEEARGWKVSDVVTNEGEWN 526


>gb|PNX79929.1| ribonuclease H, partial [Trifolium pratense]
          Length = 709

 Score =  121 bits (304), Expect = 8e-29
 Identities = 64/164 (39%), Positives = 94/164 (57%), Gaps = 15/164 (9%)
 Frame = +2

Query: 2   EIQKCQRAFILS----------VNWEVVSTPKAMGGLGINS--VMNKACLMKLGWDLRCN 145
           +IQ+ QR FI            + W+ +  PK  GGL + +  +MN+ACLMK+GW+LR  
Sbjct: 161 DIQRLQRNFIWGHEEGQKKMHMIKWDTLMLPKENGGLAVRNLPIMNQACLMKMGWNLREG 220

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGPK---FELWAIGDGTKVHAW 316
           +  LWC+VL  KY+R    +   IAK +DS + K + +       FE W+IGDG  VHAW
Sbjct: 221 NNSLWCKVLKEKYSRYRGANGTFIAKPSDSFIWKGVVQSCDNIRLFENWSIGDGKSVHAW 280

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWNKLVLKI 448
            DKWL G I +++   NIP E   + VAD+++ +G W   +L +
Sbjct: 281 RDKWLEGGIVLAQCVENIPDEITQWTVADMVDEEGNWKTRMLSL 324


>dbj|GAU19541.1| hypothetical protein TSUD_303540 [Trifolium subterraneum]
          Length = 642

 Score =  121 bits (303), Expect = 9e-29
 Identities = 68/157 (43%), Positives = 90/157 (57%), Gaps = 15/157 (9%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINSV--MNKACLMKLGWDLRCN 145
           E+QK QRAFI           +V+W+ V+ PKA+GGLGI  +  MNKACLMKLGW +R  
Sbjct: 96  ELQKIQRAFIWGDEDGNRKYHAVSWDNVTKPKALGGLGIRRLVHMNKACLMKLGWAIRSG 155

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGPK---FELWAIGDGTKVHAW 316
            + LW +V+ GKY R +      I +  DS L K+L  L      +E WAIG+G  V AW
Sbjct: 156 QEALWIDVMKGKYVRQNSSFENPIVRAHDSYLWKSLTGLLHSLNIYEFWAIGNGNSVSAW 215

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGW 427
            D+WL     I E  + IP   + + V DL+NA+G W
Sbjct: 216 HDRWLFPGKSIEEFGIVIPDNMQQWMVKDLVNANGFW 252


>dbj|GAU14937.1| hypothetical protein TSUD_47300 [Trifolium subterraneum]
          Length = 169

 Score =  112 bits (281), Expect = 2e-28
 Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 18/160 (11%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINSV--MNKACLMKLGWDLRCN 145
           EI + QR FI           +V WE V+ PK  GGLG+  +  MN+ACL+KLGW +   
Sbjct: 13  EINRLQRKFIWGDTESSNKYHAVKWEAVTMPKHYGGLGLRKLNTMNQACLLKLGWKINSG 72

Query: 146 SQVLWCEVL*GKYARDSDCSRL---LIAKGTDSSLGKNLARLGP---KFELWAIGDGTKV 307
           +   WCEVL GKY    +C  +   +  K +DSSL KN+ +L P   K+  WA+ +G  V
Sbjct: 73  ASDFWCEVLRGKY----NCQTIGEDMDTKVSDSSLWKNIVKLSPNLNKYSFWAVFNGRTV 128

Query: 308 HAWDDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGW 427
            AW   W+  ++R+ ++ +NIP+E +   V DL++ +G W
Sbjct: 129 DAWTKAWIDIDLRVIDLDVNIPIELQKAKVCDLVDNNGDW 168


>dbj|GAU45807.1| hypothetical protein TSUD_87100 [Trifolium subterraneum]
          Length = 862

 Score =  120 bits (300), Expect = 3e-28
 Identities = 65/146 (44%), Positives = 86/146 (58%), Gaps = 15/146 (10%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGIN--SVMNKACLMKLGWDLRCN 145
           E+Q+ QR FI           +V WE++STPK  GGLG+    +MNKACLMKLGW+L  N
Sbjct: 527 EVQRLQRDFIWGDSIHGIKHHAVRWELISTPKYRGGLGLRRLEIMNKACLMKLGWELNHN 586

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGP---KFELWAIGDGTKVHAW 316
              LW  VL GKY RD +      AK  DSSL + L  L     +F  WA+GDG+KVHAW
Sbjct: 587 DVGLWSAVLEGKYGRDINNLVNAQAKNNDSSLWRILVHLQQDIDRFSCWAVGDGSKVHAW 646

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFN 394
           +  W+   +RI ++ +NIP+   + N
Sbjct: 647 ESFWIEPGLRICDLNVNIPINLMHAN 672


>dbj|GAU31911.1| hypothetical protein TSUD_270960 [Trifolium subterraneum]
          Length = 853

 Score =  119 bits (298), Expect = 5e-28
 Identities = 68/162 (41%), Positives = 91/162 (56%), Gaps = 15/162 (9%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINS--VMNKACLMKLGWDLRCN 145
           +IQK QR+FI           ++ WE ++ PK +GGLG+    VMN ACLMKL W  +  
Sbjct: 320 DIQKMQRSFIWGDTEQKKHFHAIRWEQITVPKWLGGLGVRKLDVMNNACLMKLNWSYQGG 379

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGP---KFELWAIGDGTKVHAW 316
           S  LWC+VL GKY  ++       A+GTDSSL KNL +L P   +F  W +GDG  V AW
Sbjct: 380 SNDLWCKVLRGKY-EEARVQSQQKARGTDSSLWKNLVQLKPMLEEFSFWHVGDGASVDAW 438

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWNKLVL 442
              WL   + I E  + IP   +   V DL+++DG WN  +L
Sbjct: 439 KQAWLDEGLCI-EQHVAIPNHLQGLKVCDLVDSDGKWNWTLL 479


>gb|PNX66290.1| hypothetical protein L195_g055006 [Trifolium pratense]
          Length = 222

 Score =  113 bits (282), Expect = 6e-28
 Identities = 61/158 (38%), Positives = 90/158 (56%), Gaps = 15/158 (9%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINSV--MNKACLMKLGWDLRCN 145
           EI++ QR FI           ++ WE ++ PK+ GGLG+  +  MNKAC+ KL W L+  
Sbjct: 12  EIERLQRKFIWGDTQNTRKYHAIGWETITKPKSHGGLGLRRLAEMNKACIFKLVWKLQNG 71

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGPKF---ELWAIGDGTKVHAW 316
              LWC++L GKY R      + +AKGTDSSL K + +  PK      W+I DG  V   
Sbjct: 72  VNELWCQILFGKYQRGIGNDNV-VAKGTDSSLWKEIVKAWPKLLEASFWSIRDGRSVDLC 130

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWN 430
           + KW+  + R+ +M ++IP++ RN  V DL++  G WN
Sbjct: 131 NHKWIDEDTRLIDMSIDIPVQFRNAKVKDLVDDYGAWN 168


>dbj|GAU35481.1| hypothetical protein TSUD_384360 [Trifolium subterraneum]
          Length = 663

 Score =  119 bits (297), Expect = 7e-28
 Identities = 65/155 (41%), Positives = 89/155 (57%), Gaps = 15/155 (9%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGIN--SVMNKACLMKLGWDLRCN 145
           E+Q+ QR FI           +V WE++STPK  GGLG+    +MNKACLMKLGW+L  N
Sbjct: 179 EVQRLQRDFIWGDSIHGRKHHAVRWELISTPKYRGGLGLRRLEIMNKACLMKLGWELNHN 238

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGP---KFELWAIGDGTKVHAW 316
              LW  VL GKY R  +      AK  DSSL + L  L     +F  W +GDG+KVHAW
Sbjct: 239 DIGLWSVVLKGKYGRGINNLVNAQAKNNDSSLWRILVHLQQDIDRFSCWTVGDGSKVHAW 298

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADG 421
           +  W+   +RI ++ +NIP+   +  V++L   +G
Sbjct: 299 ESFWIEPGLRICDLNVNIPINLMHATVSELSTIEG 333


>dbj|GAU10179.1| hypothetical protein TSUD_416550 [Trifolium subterraneum]
          Length = 557

 Score =  118 bits (295), Expect = 9e-28
 Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 15/158 (9%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINS--VMNKACLMKLGWDLRCN 145
           +IQ+ QR FI           ++ W+ ++TPK  GGLG+ +  VMNKACL+KL W L+  
Sbjct: 170 DIQRMQRQFIWGDTDQKKRFHAIGWDTITTPKWQGGLGLRNLEVMNKACLLKLNWKLQSG 229

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGP---KFELWAIGDGTKVHAW 316
            + LWC+V+ GKYA  +       +K TDSSL K L  L P   +  +W +GDG+ + AW
Sbjct: 230 CEDLWCKVINGKYAAST-------SKVTDSSLRKTLIELEPLLQQHSVWQVGDGSVIDAW 282

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWN 430
            DKW+ G++R+ +  + IP       V D+++ +G WN
Sbjct: 283 SDKWIDGDLRL-DQHMTIPSHLHGLKVRDIVDGNGYWN 319


>gb|PNY14273.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1048

 Score =  118 bits (296), Expect = 1e-27
 Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 15/162 (9%)
 Frame = +2

Query: 2    EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINSV--MNKACLMKLGWDLRCN 145
            E+QK QRAFI           +V+W+ V+ PKA+GGLGI  +  MNKACLMKLGW +R  
Sbjct: 820  ELQKIQRAFIWGDEDGNRKYHAVSWDNVTKPKALGGLGIRRLVHMNKACLMKLGWAIRSG 879

Query: 146  SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGPK---FELWAIGDGTKVHAW 316
             + LW +V+ GKY R +      I +  DS L K+LA        ++ WAIG+G  V AW
Sbjct: 880  QEALWIDVMQGKYVRQNSSFANPIVRAQDSCLWKSLAGALHSLNIYDFWAIGNGNSVSAW 939

Query: 317  DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWNKLVL 442
             D+WL     I E+ + IP   + + V DL+N +G W   +L
Sbjct: 940  RDRWLFPGKSIEEIGIAIPDNMQRWMVKDLVNDNGFWKLDIL 981


>gb|PNX91173.1| ribonuclease H, partial [Trifolium pratense]
          Length = 390

 Score =  115 bits (289), Expect = 1e-27
 Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 15/157 (9%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGIN--SVMNKACLMKLGWDLRCN 145
           EIQK QR F+           +V W  ++ PK +GGL +   S MN AC+MKLGW ++  
Sbjct: 200 EIQKLQRGFVWGDDENKRRLHTVRWSTLTIPKELGGLAVRDMSKMNLACIMKLGWSIKMQ 259

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLG---PKFELWAIGDGTKVHAW 316
              LWC+VL GKYAR +      I K +DSSL K++ ++     KFE W+IGDG KV+ W
Sbjct: 260 ENNLWCQVLRGKYARGNSIFESPIVKKSDSSLWKSIGKVWSDISKFEAWSIGDGLKVNCW 319

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGW 427
            D W+  + R+ E+   +P    ++ V DL++ +  W
Sbjct: 320 KDIWIDTSTRLGELVDTLPNNIADWTVHDLVDNNNMW 356


>dbj|GAU26489.1| hypothetical protein TSUD_361220 [Trifolium subterraneum]
          Length = 577

 Score =  117 bits (294), Expect = 1e-27
 Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 15/158 (9%)
 Frame = +2

Query: 2   EIQKCQRAFIL----------SVNWEVVSTPKAMGGLGINSV--MNKACLMKLGWDLRCN 145
           EI   QR FI           ++ WE V+ PK  GGLG+  +  MN+ACL+KLGW     
Sbjct: 170 EINMLQRKFIWGETEGNNKYHAIRWEDVTRPKRFGGLGLRRLDTMNQACLLKLGWKFNSG 229

Query: 146 SQVLWCEVL*GKYARDSDCSRLLIAKGTDSSLGKNLARLGP---KFELWAIGDGTKVHAW 316
           +  LWCEVL GKY+  +  S  ++ K   SSL KN+ +L     K+  WA+G+G  V AW
Sbjct: 230 ASDLWCEVLHGKYSCQT-ISENMVIKAPASSLWKNIVKLSSNLNKYSFWAVGNGYSVDAW 288

Query: 317 DDKWLRGNIRISEMRLNIPMEQRNFNVADLINADGGWN 430
              W+   +RI+++ L IP E +N  V DL+++ G WN
Sbjct: 289 TSAWIDAGLRITDLDLAIPEELQNAKVCDLVDSSGEWN 326