BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00026250
         (4265 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY17729.1| retrotransposon-related protein [Trifolium pratense]  1866   0.0  
gb|PNX92266.1| retrotransposon-related protein [Trifolium pratense]  1865   0.0  
gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium prat...  1862   0.0  
gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]  1860   0.0  
gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium prat...  1857   0.0  
dbj|GAU12723.1| hypothetical protein TSUD_122150 [Trifolium subt...  1857   0.0  
gb|PNY17651.1| retrotransposon-related protein [Trifolium pratense]  1824   0.0  
dbj|GAU25735.1| hypothetical protein TSUD_216660 [Trifolium subt...  1780   0.0  
gb|PNX93486.1| retrotransposon-related protein, partial [Trifoli...  1736   0.0  
gb|PNY17582.1| Ty3/gypsy retrotransposon protein, partial [Trifo...  1649   0.0  
dbj|GAU25035.1| hypothetical protein TSUD_155090 [Trifolium subt...  1564   0.0  
ref|XP_022547700.1| uncharacterized protein LOC111200699 [Brassi...  1548   0.0  
dbj|GAU39660.1| hypothetical protein TSUD_60270 [Trifolium subte...  1516   0.0  
ref|XP_013658015.1| uncharacterized protein LOC106362703 [Brassi...  1471   0.0  
gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium prat...  1447   0.0  
gb|KYP38605.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]  1417   0.0  
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...  1409   0.0  
ref|XP_010491426.2| PREDICTED: uncharacterized protein LOC104769...  1396   0.0  
dbj|GAU27517.1| hypothetical protein TSUD_147110 [Trifolium subt...  1355   0.0  
gb|PKA46982.1| putative mitochondrial protein [Apostasia shenzhe...  1291   0.0  

>gb|PNY17729.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1479

 Score = 1866 bits (4833), Expect = 0.0
 Identities = 901/1378 (65%), Positives = 1081/1378 (78%), Gaps = 21/1378 (1%)
 Frame = -3

Query: 4260 PEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQVK 4081
            P  RVRLASIHL+GLALQWHLNYMR +FD YP W +Y+ DV  RFGD YEDPL+ L+Q+K
Sbjct: 101  PTSRVRLASIHLDGLALQWHLNYMRQKFDIYPSWQQYITDVTARFGDAYEDPLSSLLQIK 160

Query: 4080 HTSS-VQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
            HT+  VQ +ID FELA TQVS++PEH+LSIFLA LD  T+ HVRMFNP+SIA AANLAKL
Sbjct: 161  HTAGKVQDYIDQFELALTQVSLIPEHSLSIFLAGLDNNTKMHVRMFNPSSIAHAANLAKL 220

Query: 3903 HESTKITHQKPTQYKPPFTKTNQTVTTKEPSPTQ--------------------KPIFTK 3784
            HE+ + + QKPT    PF K    +T    SP+                     K   T+
Sbjct: 221  HEAAQPSPQKPTSRFSPFYKNAGLLTKPTISPSSSTSISSSTTPIENSSPNSNLKTNSTR 280

Query: 3783 TNKTMTPAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEATSXXXXX 3604
              +T +  EM+ERRAKGLCMFCDE FTPGHHLKH+R Q+M++E++ DD   E  +     
Sbjct: 281  HTRTYSANEMAERRAKGLCMFCDEQFTPGHHLKHKRSQLMVLELDDDDLPAEDPAIEPTI 340

Query: 3603 XXXXXXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQL 3424
                        Q+SLQALTG+ +Y TMRV GL+ KKLL ILLDSGSTHNFLDL  A  L
Sbjct: 341  TEFESLQAFEHPQLSLQALTGISNYHTMRVTGLHDKKLLHILLDSGSTHNFLDLEVAKSL 400

Query: 3423 GCKLEKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLK 3244
            GCKLE + P+ VTGGGG++L A +IC+ F W++   +F+AD+IVLPLVCCDLILGIQWLK
Sbjct: 401  GCKLEAISPLSVTGGGGHQLEAAFICRGFKWNLQQAQFTADVIVLPLVCCDLILGIQWLK 460

Query: 3243 SLGPILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDTT 3064
            SLGPILWDF KL MEF+  G R  LRG KTPS+KLI+N++   AV +GAELCFL +N+  
Sbjct: 461  SLGPILWDFAKLQMEFTSNGRRFVLRGAKTPSLKLINNKSFAQAVHKGAELCFLALNNVD 520

Query: 3063 PQFIIPSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMP 2884
              F++P+C   Q+    + LP   E LL  YADIF EP+ LPPSR GFDHKIPLK+   P
Sbjct: 521  YPFMVPTCHALQASDSPAALPQTFEQLLAHYADIFAEPTTLPPSRPGFDHKIPLKEGVQP 580

Query: 2883 VNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLN 2704
             N+RPYR+S++QK+++DK+V +ML QGI+Q+S SPFASPT+LVRKKDGSWRLCVD+RRLN
Sbjct: 581  FNLRPYRFSLVQKDVIDKIVQDMLDQGIVQHSTSPFASPTILVRKKDGSWRLCVDFRRLN 640

Query: 2703 HSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYL 2524
              TIKDRFPIPLIEDLMDEL G+ +FSKLDLRSGYHQLRMA GE +KTAFKTHSGH+EYL
Sbjct: 641  DLTIKDRFPIPLIEDLMDELHGSVIFSKLDLRSGYHQLRMAPGESFKTAFKTHSGHFEYL 700

Query: 2523 VMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHH 2344
            VMPFGLTNAPASFQ+LMN +F+ +LRKFVI+FFDD+LVYS SL DH  HL  +F   R +
Sbjct: 701  VMPFGLTNAPASFQALMNQVFKPFLRKFVIVFFDDLLVYSHSLVDHHVHLQLIFQTIREN 760

Query: 2343 KLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYY 2164
             LFLN+ KC FA  RVEYLGHFI++ GVSTDP+KIQAV++WP+P+N+KQLRGFLGLAGYY
Sbjct: 761  HLFLNQSKCAFALPRVEYLGHFISREGVSTDPLKIQAVSSWPIPQNLKQLRGFLGLAGYY 820

Query: 2163 RRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETD 1984
            RRFVKDFGK+AKPLTDLL+KD F WS     AF  LK ALV+APVL LPDF K F++ETD
Sbjct: 821  RRFVKDFGKLAKPLTDLLRKDNFNWSAEATHAFVTLKQALVSAPVLSLPDFSKRFVVETD 880

Query: 1983 ASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFIIR 1804
            ASGKGIGAVLMQE+HPIAYISK+LG KQQA+S+YE+ELLAIVYA+QKW +YL+H PF I+
Sbjct: 881  ASGKGIGAVLMQEHHPIAYISKSLGPKQQAMSVYERELLAIVYAVQKWGSYLSHAPFTIK 940

Query: 1803 TDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLVL 1624
            TDQKSIK+ML+Q+LNTPFQQ W+AKL+GF+F+IQYKEG  N AADALSR  GAE++ L++
Sbjct: 941  TDQKSIKHMLDQKLNTPFQQVWVAKLLGFDFDIQYKEGSSNVAADALSRKMGAELLALMM 1000

Query: 1623 NNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAVK 1444
            +N S+DL + I L+W QD  ++ +I E+  N  SHSK+SW  + LRR GKLV+GSD A+K
Sbjct: 1001 SNASHDLWESINLAWQQDPYLKDIIHEVQQNSKSHSKFSWIRDELRRRGKLVIGSDPAIK 1060

Query: 1443 STLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSPG 1264
             T+L WLH SA GGHSGRD T +++KSLFYWKGM KD+  +V+ C +CQ+ KP+   SPG
Sbjct: 1061 ETILTWLHSSAVGGHSGRDVTASKVKSLFYWKGMNKDILNFVKNCAICQKQKPDLAASPG 1120

Query: 1263 LLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQT 1084
            LLQPLPIP  IW  IS+DFI+GLP S GKQVI VVVDRLSKYAHF+AL HPYTAL+VAQ 
Sbjct: 1121 LLQPLPIPSHIWAHISMDFIDGLPTSSGKQVIFVVVDRLSKYAHFMALAHPYTALDVAQL 1180

Query: 1083 FLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKAL 904
            FLD+VFKLHGLP S  SDRDPIFLS FW+E F LQGV+LNKS+AYHPQSDGQ+EIVNK L
Sbjct: 1181 FLDNVFKLHGLPESITSDRDPIFLSNFWNEFFKLQGVALNKSSAYHPQSDGQTEIVNKCL 1240

Query: 903  ETYLRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGESNN 724
            ETYLRCM S+ P  W KWL LAE+WYNT FHSSI TTPFEVVYGQPPP+HLPYLPG S  
Sbjct: 1241 ETYLRCMCSDHPTQWFKWLSLAEWWYNTNFHSSIHTTPFEVVYGQPPPIHLPYLPGSSAT 1300

Query: 723  SAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFTLR 544
             +VDR+L ARE+AIKLL+FHLLRAQNRM QQANKHR+DRVF IGDYV+LKLQPYRQ +++
Sbjct: 1301 LSVDRSLIAREEAIKLLKFHLLRAQNRMVQQANKHRSDRVFNIGDYVYLKLQPYRQLSMK 1360

Query: 543  NQAFHKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIEHPA 364
            +  FHKL PKF+GP+ + DRIG+ AYQL+LP +  IHNVFHVSQLK C NP    ++H  
Sbjct: 1361 SHGFHKLLPKFYGPFPIVDRIGAAAYQLQLPPSAAIHNVFHVSQLKLCPNPQGLPVQHLP 1420

Query: 363  VPSVITSKGEPESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAFH 190
              +V      P +IL RKMVKRGH+AATKVL++WKNL  + ATWE+YYD L+ +P FH
Sbjct: 1421 AATVAHVDKIPVAILDRKMVKRGHKAATKVLIQWKNLPLDKATWEFYYDFLKKFPTFH 1478


>gb|PNX92266.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1479

 Score = 1865 bits (4831), Expect = 0.0
 Identities = 905/1374 (65%), Positives = 1093/1374 (79%), Gaps = 16/1374 (1%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQV 4084
            P  + VRLASIHL+GLALQWHLNYMR +FD YP W +YV+DV  RFGD YEDPL+ L+QV
Sbjct: 109  PATEMVRLASIHLDGLALQWHLNYMRQKFDYYPTWQQYVSDVTTRFGDAYEDPLSALLQV 168

Query: 4083 KHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
            KHT+ VQ ++D FELA TQV++LPEH+LSIFLA LD  TQ HVRMF+P+SIA AANLAKL
Sbjct: 169  KHTAKVQDYVDQFELALTQVTLLPEHSLSIFLAGLDHGTQMHVRMFSPSSIAHAANLAKL 228

Query: 3903 HESTKITHQKP-------TQYKPPFTKT------NQTVTTKEPS---PTQKPIFTKTNKT 3772
            HE++K    KP       ++Y P  +K+      N   T   PS   P  KP+F+KTN+T
Sbjct: 229  HEASK--DSKPVHRVSAFSKYSPASSKSLTSPSSNSPTTLPTPSSTTPNPKPLFSKTNRT 286

Query: 3771 MTPAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEATSXXXXXXXXX 3592
             + AEM ERRAKGLCMFCDE FTPGH LKH+R  +M+ME++ ++  +  TS         
Sbjct: 287  FSAAEMEERRAKGLCMFCDEVFTPGHQLKHKRSHLMVMELDEEEPLDIDTSLESSAQLEA 346

Query: 3591 XXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCKL 3412
                     +SLQALTGV  YQTMRV G++ KK+L ILLDSGSTHNFLDL  A +LGCKL
Sbjct: 347  VSQFDSPQ-LSLQALTGVSHYQTMRVTGMHDKKVLHILLDSGSTHNFLDLELAKKLGCKL 405

Query: 3411 EKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLGP 3232
            E + P+ +T GGG+KL A ++CK F W +    F AD+IVLPL C DLILGIQWLKSLGP
Sbjct: 406  EAISPLAITSGGGHKLEAAFVCKSFKWLLQQTVFMADVIVLPLGCSDLILGIQWLKSLGP 465

Query: 3231 ILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDTTPQFI 3052
            ILWDFDKL MEF+ QG +  LRG KTPS+KL++N++   AV+ GAELC + +N   P F 
Sbjct: 466  ILWDFDKLQMEFTTQGRKFVLRGAKTPSIKLVNNKSFAHAVQNGAELCLMTLNTHVPVFD 525

Query: 3051 IPSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMPVNIR 2872
            +P+C +  +       P  I+ LL  + DIF EPS LPP R GFDHKIPLKD + P N++
Sbjct: 526  VPTCLILSTADGSGCTPPLIDQLLHVFQDIFTEPSSLPPHRVGFDHKIPLKDGSEPFNLK 585

Query: 2871 PYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLNHSTI 2692
            PYRYS+IQK I+D LV+ ML QGIIQ+S SPF+SPTVLVRKKDGSWRLCVD+RRLN  TI
Sbjct: 586  PYRYSLIQKTIIDNLVDVMLDQGIIQHSTSPFSSPTVLVRKKDGSWRLCVDFRRLNQFTI 645

Query: 2691 KDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYLVMPF 2512
            KDRFPIPLIEDL+DEL GAS+FSKLDL+SGYHQLRMAEGEE+KTAFKTHSGH+E+LVMPF
Sbjct: 646  KDRFPIPLIEDLLDELAGASIFSKLDLKSGYHQLRMAEGEEHKTAFKTHSGHFEFLVMPF 705

Query: 2511 GLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHHKLFL 2332
            GLTNAPASFQSLMNHLF+ +LR+FVIIFFDD+LVYS SLQ+H +HLS +F + R H+LFL
Sbjct: 706  GLTNAPASFQSLMNHLFKPFLRRFVIIFFDDLLVYSKSLQEHIEHLSSIFKLIRVHQLFL 765

Query: 2331 NKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYYRRFV 2152
            N+KKC F T+RVEYLGHFIT+ GVSTDP KIQAV +WP PKN KQLRGFLGLAGYYRRFV
Sbjct: 766  NRKKCSFGTERVEYLGHFITKEGVSTDPAKIQAVRDWPFPKNPKQLRGFLGLAGYYRRFV 825

Query: 2151 KDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETDASGK 1972
            KDFGK+AKPLTD+LK+D+FLWS  +  AF  LK AL++AP++ LPDF + F++ETDASGK
Sbjct: 826  KDFGKIAKPLTDMLKRDSFLWSSESTAAFTELKQALISAPLMRLPDFSQKFVVETDASGK 885

Query: 1971 GIGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFIIRTDQK 1792
            GIGAVLMQ++HPIAYISK+LG KQQA+S+YE+ELLAIVYA+QKW  YL+H PFII+TDQ+
Sbjct: 886  GIGAVLMQQHHPIAYISKSLGPKQQAMSVYERELLAIVYAVQKWGAYLSHAPFIIKTDQR 945

Query: 1791 SIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLVLNNVS 1612
            SIK++L+Q+LNT FQQAW+AKLMGF+FEIQYKEG  N AADALSR EGAE++ ++LN+ S
Sbjct: 946  SIKHILDQKLNTSFQQAWVAKLMGFDFEIQYKEGAHNLAADALSRREGAELLPMLLNSAS 1005

Query: 1611 NDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAVKSTLL 1432
             DL + I+ SW +D ++QKLI ++  N  SH K+SW  N LRR GKLV+G D  +K+++L
Sbjct: 1006 PDLYESIKASWTRDPSVQKLIADLVLNHNSHPKFSWVRNELRRRGKLVIGQDPHLKNSIL 1065

Query: 1431 QWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSPGLLQP 1252
            +WLHDS+ GGHSGRD T AR+KSLFYWKGM KD+  YVR C VCQR+K +   SPGLLQP
Sbjct: 1066 RWLHDSSVGGHSGRDITAARVKSLFYWKGMAKDIQIYVRNCAVCQRNKADLSASPGLLQP 1125

Query: 1251 LPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQTFLDS 1072
            LPIP +IW  IS+DFIEGLP S GKQVI VVVDRLSKYAHF+ L HPYTA+++A+ FLD+
Sbjct: 1126 LPIPSKIWVDISMDFIEGLPPSAGKQVIFVVVDRLSKYAHFIPLSHPYTAVDIAKVFLDN 1185

Query: 1071 VFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKALETYL 892
            VFKLHGLP S  SDRDPIFLS FW+E F LQGV+LNKSTAYHPQSDGQ+EIVNKA+ETYL
Sbjct: 1186 VFKLHGLPESITSDRDPIFLSTFWNEFFKLQGVALNKSTAYHPQSDGQTEIVNKAVETYL 1245

Query: 891  RCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGESNNSAVD 712
            RCM SE+P  W +W+P+AE+WYN+ FHS+I+TTP+EVVYGQPPP+HLPYLPG S++  VD
Sbjct: 1246 RCMCSEKPTSWSQWIPMAEYWYNSNFHSAIQTTPYEVVYGQPPPIHLPYLPGASSSVTVD 1305

Query: 711  RTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFTLRNQAF 532
             +L ARE+AIKLL+FHLLRAQNRM QQA+KHR+DR F IGD+V+LKL PYRQ +++    
Sbjct: 1306 GSLLAREEAIKLLKFHLLRAQNRMIQQADKHRSDRKFEIGDFVYLKLHPYRQLSVKPHLH 1365

Query: 531  HKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIEHPAVPSV 352
            HKL PKFFGP++V D++G VAYQLELPS+  IHNVFHVSQLK C NP++  I  P    V
Sbjct: 1366 HKLLPKFFGPFKVIDKVGHVAYQLELPSSVAIHNVFHVSQLKLCPNPASNPIV-PIPAGV 1424

Query: 351  ITSKGEPESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAFH 190
                  PE+IL RKMVKRG  AATKVLVKW+N +PELATWE+YYDLL  +P FH
Sbjct: 1425 DQFHRVPEAILDRKMVKRGRTAATKVLVKWQNTSPELATWEFYYDLLEKFPNFH 1478


>gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1476

 Score = 1862 bits (4823), Expect = 0.0
 Identities = 916/1372 (66%), Positives = 1096/1372 (79%), Gaps = 14/1372 (1%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQV 4084
            P + +VRL SIHLEG ALQWHLNYMR RFD YP W EY+ +V +RFGD++EDPL+ LIQV
Sbjct: 108  PDDSKVRLVSIHLEGPALQWHLNYMRSRFDVYPSWTEYIVEVTQRFGDVFEDPLSALIQV 167

Query: 4083 KHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
            K T +VQ +ID FELA TQVS+ PE  LSIFLA L+  TQ HVRMF+PTS+  A  LAK 
Sbjct: 168  KQTGTVQEYIDAFELALTQVSLFPEQTLSIFLAGLEISTQMHVRMFHPTSVHHAGRLAKF 227

Query: 3903 HESTKITHQK-------PTQYK--PPFTKTNQTVTTKEPSPTQKPIFTKTNKTMTPAEMS 3751
            HE++KI+ Q        P+Q+   PPFT  +    T  P+PT KP+ +   K+ +PAEMS
Sbjct: 228  HEASKISPQTTKFTPKPPSQFPKTPPFTPKSTPPITPIPTPTTKPLISTIPKSFSPAEMS 287

Query: 3750 ERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEAT-SXXXXXXXXXXXXXXX 3574
            ER+AKGLCMFCDE FTPGH LKHRR Q+ +ME++ +D+  ++  +               
Sbjct: 288  ERKAKGLCMFCDEAFTPGHQLKHRRTQLFVMELDDEDSPVDSKDTPTLDSSENIDSCQTD 347

Query: 3573 XXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCKLEKVKPM 3394
              Q+SL A+TG+PSYQTM+V G + +K LQ+LLDSGSTHNFLDL  A +LGCKLE V+PM
Sbjct: 348  CAQLSLHAMTGLPSYQTMKVSGSHNQKSLQVLLDSGSTHNFLDLEVAKKLGCKLEAVQPM 407

Query: 3393 KVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLGPILWDFD 3214
             VT GGGNK+ APYIC+ FT  +    F+AD++VLPL C DLILGI +LK+L PILWDF+
Sbjct: 408  TVTAGGGNKIQAPYICRGFTCQLQQTTFTADVVVLPLGCYDLILGIPFLKTLSPILWDFN 467

Query: 3213 KLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQV-NDTTPQFIIPSCS 3037
            KL MEF  +G R  LRG K   V+LISN+A + AV+QGAELC L + NDT P+  +   +
Sbjct: 468  KLQMEFKFKGKRFVLRGAKQNGVQLISNKAFHQAVKQGAELCLLTMDNDTQPKVELCCKT 527

Query: 3036 VSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMPVNIRPYRYS 2857
            +S++  LQ  +P +I  L++ YADIF EP  LPP R  FDHKIPLK+   PV++RPYRYS
Sbjct: 528  ISETDILQ--VPHQITQLIDIYADIFEEPRTLPPHREAFDHKIPLKESANPVSLRPYRYS 585

Query: 2856 IIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLNHSTIKDRFP 2677
             +QK+I+D LV+E+L +G IQ+SNSPFASP VLVRKK G WRLCVD+RRLN  T+KD+FP
Sbjct: 586  SVQKDIIDGLVDELLEKGWIQHSNSPFASPVVLVRKKGGKWRLCVDFRRLNQQTVKDKFP 645

Query: 2676 IPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYLVMPFGLTNA 2497
            IPLIEDLMDELGG+S++SKLDL+SGY+QLR+A GEEYKTAFKTH GH+EYLVMPFGLTNA
Sbjct: 646  IPLIEDLMDELGGSSIYSKLDLQSGYNQLRVASGEEYKTAFKTHGGHFEYLVMPFGLTNA 705

Query: 2496 PASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHHKLFLNKKKC 2317
            PASFQSLMNH+F  +LRKFVIIFFDDILVYS S Q+H  HL  +F   R+++LFL K+KC
Sbjct: 706  PASFQSLMNHIFHPFLRKFVIIFFDDILVYSPSFQEHLTHLEVIFQTLRNNQLFLRKEKC 765

Query: 2316 HFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYYRRFVKDFGK 2137
            HFAT RVEYLGHFIT+ GVSTDP KIQAV +WP+P NIKQLRGFLGLAGYYRRFVK+FGK
Sbjct: 766  HFATTRVEYLGHFITKEGVSTDPSKIQAVESWPLPINIKQLRGFLGLAGYYRRFVKNFGK 825

Query: 2136 VAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETDASGKGIGAV 1957
            +AKPLTDLL+KDAF WS +   +F  LKNAL+TAPVLILPDF K F++ETDASG GIGAV
Sbjct: 826  IAKPLTDLLRKDAFHWSPAATASFNELKNALITAPVLILPDFTKPFVVETDASGTGIGAV 885

Query: 1956 LMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFIIRTDQKSIKYM 1777
            LMQ+ HP+AYISKALG KQQA+SIYE+ELLAIVYA+Q+W TYLAH+PF+I+TDQKSIK+M
Sbjct: 886  LMQDRHPVAYISKALGIKQQAMSIYERELLAIVYAVQRWGTYLAHKPFVIKTDQKSIKHM 945

Query: 1776 LEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLVLNNVSNDLLK 1597
            LEQRLNTPFQQ WMAKLMGF+FEIQYKEG  N AADALSR  GAE++ L L NV+ +L +
Sbjct: 946  LEQRLNTPFQQVWMAKLMGFDFEIQYKEGTSNVAADALSRKVGAELLPLFLGNVNENLFE 1005

Query: 1596 QIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAVKSTLLQWLHD 1417
             I+ SW+ D  +Q +I ++ TN   HSK+SW    LRR GKLVVGSD  +   +L+W HD
Sbjct: 1006 MIKDSWSADPNLQVIISDLQTNTKPHSKFSWYRGELRRKGKLVVGSDPTLHRFILKWFHD 1065

Query: 1416 SAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSPGLLQPLPIPG 1237
            S AGGHSGRD T AR+KSLF+WKGMTKD+  Y+R C VCQR KPEQIPSPGLLQPLPIP 
Sbjct: 1066 SPAGGHSGRDVTAARIKSLFFWKGMTKDIQQYIRNCDVCQRCKPEQIPSPGLLQPLPIPD 1125

Query: 1236 RIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQTFLDSVFKLH 1057
            +IWD+ISLDFIEGLP S GKQVI VVVDRLSKYAHF+AL HP+TAL+VAQ FLD+VFKLH
Sbjct: 1126 KIWDAISLDFIEGLPSSMGKQVIFVVVDRLSKYAHFMALSHPFTALDVAQLFLDNVFKLH 1185

Query: 1056 GLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKALETYLRCMTS 877
            GLPS+  SDRDPIFLS+ W++LF LQGV LNKSTAYHPQ+DGQ+EIVNK LETYLRCM +
Sbjct: 1186 GLPSTITSDRDPIFLSKLWNDLFQLQGVYLNKSTAYHPQTDGQTEIVNKCLETYLRCMCA 1245

Query: 876  EQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGESNNSAVDRTLTA 697
            ++P  WIKWL LAE+WYNT FHSSI+TTPFEVVYGQ PP+HLPYLPGES++  VDRTL A
Sbjct: 1246 DKPSSWIKWLSLAEWWYNTNFHSSIQTTPFEVVYGQTPPLHLPYLPGESSSLQVDRTLHA 1305

Query: 696  REDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFTLRNQAFHKLNP 517
            RE AI++L+FHL+RAQNRMAQ A+KHRTDR+F IGD+V+LKLQPYRQ ++R Q  HKL P
Sbjct: 1306 RETAIQMLKFHLMRAQNRMAQHADKHRTDRIFHIGDFVYLKLQPYRQSSVRLQRHHKLMP 1365

Query: 516  KFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIEHPAVPSVITSKG 337
            KF+GPY+V DRIG+ AYQLELPST KIHNVFHVSQLKRC N +   + HP +P +I+S+ 
Sbjct: 1366 KFYGPYKVVDRIGAAAYQLELPSTAKIHNVFHVSQLKRCKNANETAV-HP-MPGIISSEF 1423

Query: 336  ---EPESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAFH 190
               EPESIL RKMVKRG  AATKVLVKWK L  E ATWE+YYDLL+ +P FH
Sbjct: 1424 TQLEPESILDRKMVKRGRIAATKVLVKWKELPQEKATWEFYYDLLKKFPNFH 1475


>gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1472

 Score = 1860 bits (4819), Expect = 0.0
 Identities = 902/1374 (65%), Positives = 1081/1374 (78%), Gaps = 16/1374 (1%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQV 4084
            P    VRLASIHL+GLALQWHLNYMR +FD YP W +Y+ DV  RFGD YEDPL+ L+Q+
Sbjct: 100  PATSMVRLASIHLDGLALQWHLNYMRQKFDVYPSWQQYITDVTARFGDAYEDPLSSLLQI 159

Query: 4083 KHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
            KHT  +Q +ID FELA TQV+++PEH+LSIFLA L+  TQ HVRMFNP+SI+ AANLAKL
Sbjct: 160  KHTGKIQDYIDQFELALTQVNLIPEHSLSIFLAGLEQNTQMHVRMFNPSSISHAANLAKL 219

Query: 3903 HE-STKITHQKPTQYKP----------PFTKTNQTVTTKEPSPT----QKPIFTKTNKTM 3769
            HE ST + H+  +++ P          P T  + + T+  P+ T    QK    +  +T 
Sbjct: 220  HEASTSLPHRNTSKFSPFSKNQGLLSKPTTSNSPSTTSPIPNGTASLVQKSNSPRPTRTY 279

Query: 3768 TPAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEATSXXXXXXXXXX 3589
            +  EMSERRAKGLCMFCDE FTPGH  KH+R Q+ ++E++ DD                 
Sbjct: 280  SGLEMSERRAKGLCMFCDEQFTPGHQFKHKRYQINVLEIDDDDDCNGEEPNSESVAEMES 339

Query: 3588 XXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCKLE 3409
                   Q+SLQALTG+ +YQTMRV GL+ KK+L ILLDSGSTHNFLDL  A  LGCKLE
Sbjct: 340  LSAFENAQLSLQALTGIANYQTMRVTGLHEKKMLHILLDSGSTHNFLDLETAKSLGCKLE 399

Query: 3408 KVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLGPI 3229
             + P+ VTGGGG+KL A YIC+ F W +   +F+AD+IVLPLVCCDLILGIQWLKSLGPI
Sbjct: 400  AISPLSVTGGGGHKLEAAYICRGFQWQLQQAKFNADVIVLPLVCCDLILGIQWLKSLGPI 459

Query: 3228 LWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDTTPQFII 3049
            LWDF+KL MEF  QG R  LRG K PS KL++N++   AV +GAELCFL +++    F +
Sbjct: 460  LWDFEKLQMEFHTQGKRFVLRGAKVPSFKLVNNKSFAQAVHKGAELCFLSISNHVNSFDV 519

Query: 3048 PSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMPVNIRP 2869
            P+C V QSG     LP  I  L+E Y DIF +P  LPP R GFDHKIPLK+   P N+RP
Sbjct: 520  PTCYVMQSGVSDVSLPPVIADLIEDYGDIFRDPEHLPPPRPGFDHKIPLKEGAEPFNLRP 579

Query: 2868 YRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLNHSTIK 2689
            YR+S+IQK+I+DKLVN+ML QGI+Q+SNSPFASPT+LVRKKDGSWRLCVD+RRLN  TIK
Sbjct: 580  YRFSVIQKDIIDKLVNDMLAQGIVQHSNSPFASPTILVRKKDGSWRLCVDFRRLNDLTIK 639

Query: 2688 DRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYLVMPFG 2509
            DRFPIPLIEDLMDEL G+ VFSKLD+RSGYHQLRMA+GEE+KTAFKTHSGHYEYLVMPFG
Sbjct: 640  DRFPIPLIEDLMDELCGSVVFSKLDMRSGYHQLRMAKGEEHKTAFKTHSGHYEYLVMPFG 699

Query: 2508 LTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHHKLFLN 2329
            LTNAPASFQSLMN +FQ +LRKFVIIFFDD+L+YS S++DH  HL  +F   R + LFLN
Sbjct: 700  LTNAPASFQSLMNQVFQPFLRKFVIIFFDDLLIYSQSIEDHLVHLRLIFHTIRANHLFLN 759

Query: 2328 KKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYYRRFVK 2149
              KC FA  +VEYLGHFIT+ GVSTDP KIQAV++WP+P+N+KQLRGFLGLAGYYRRFV+
Sbjct: 760  XSKCSFALPKVEYLGHFITKEGVSTDPAKIQAVSSWPIPQNVKQLRGFLGLAGYYRRFVQ 819

Query: 2148 DFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETDASGKG 1969
            DFGK+AKPLTDLLKK+ F+W+D+   AF  LK AL+TAPVL LP+F K F++ETDASGKG
Sbjct: 820  DFGKLAKPLTDLLKKEGFVWTDNATQAFMQLKQALITAPVLSLPNFSKQFVVETDASGKG 879

Query: 1968 IGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFIIRTDQKS 1789
            IGAVLMQE HP+AYISK+LG KQQA+S+YE+ELLAIVYA+QKW +YL+H PF+IRTDQKS
Sbjct: 880  IGAVLMQEQHPVAYISKSLGPKQQAMSVYERELLAIVYAVQKWGSYLSHAPFVIRTDQKS 939

Query: 1788 IKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLVLNNVSN 1609
            IK+ML+Q+LNTPFQQ W+AKL+GF+FEI YKEG  N AADALSR  GAE++ L L+N + 
Sbjct: 940  IKHMLDQKLNTPFQQVWVAKLLGFDFEIHYKEGSSNLAADALSRKTGAELLPLFLDNAAP 999

Query: 1608 DLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAVKSTLLQ 1429
            DLL  I  SW QD   + +I ++ +NP SH K+SW    LRR GKLV+GSD AVK ++L 
Sbjct: 1000 DLLTSITASWQQDPHFKAIILDLQSNPQSHPKFSWTRGELRRRGKLVIGSDPAVKESILH 1059

Query: 1428 WLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSPGLLQPL 1249
            WLHDSA GGHSGRD T  R+KSLFYWKGMTKD+  YV+ C VCQR+KP+    PGLLQPL
Sbjct: 1060 WLHDSALGGHSGRDVTATRIKSLFYWKGMTKDILHYVKNCGVCQRNKPDLAAYPGLLQPL 1119

Query: 1248 PIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQTFLDSV 1069
            PIP +IW +IS+DFIEGLP S GKQVI VVVDRLSKYAHF+AL HPYTAL+VAQ FLD+V
Sbjct: 1120 PIPTQIWTAISMDFIEGLPTSAGKQVIFVVVDRLSKYAHFMALSHPYTALDVAQLFLDNV 1179

Query: 1068 FKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKALETYLR 889
            FKLHG+P +  SDRD IFLS FW E F LQGV+L+KSTAYHPQSDGQ+EIVNK LETYLR
Sbjct: 1180 FKLHGMPETITSDRDXIFLSTFWHEFFKLQGVALHKSTAYHPQSDGQTEIVNKCLETYLR 1239

Query: 888  CMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGESNNSAVDR 709
            CM S +P +W KWL LAE+WYNT +HSSI TTPFEVVYGQPPP+HLPYLPG S + +VDR
Sbjct: 1240 CMCSSRPTNWFKWLSLAEWWYNTNYHSSIHTTPFEVVYGQPPPIHLPYLPGSSPSFSVDR 1299

Query: 708  TLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFTLRNQAFH 529
            +L AR++AIKLL+FHLLRAQNRM+QQANKHR+DRVF+IGDYV+LKLQPYRQ +++   ++
Sbjct: 1300 SLIARDEAIKLLKFHLLRAQNRMSQQANKHRSDRVFSIGDYVYLKLQPYRQLSMKKHGYN 1359

Query: 528  KLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIEHPAVPSVI 349
            KL PKF+GP++V DRIG  AYQLELP +  IHNVFHVSQLK C NP A  I+H  +PS  
Sbjct: 1360 KLLPKFYGPFKVLDRIGGAAYQLELPPSAAIHNVFHVSQLKLCPNPQAQPIQH--LPSAT 1417

Query: 348  TSKGE-PESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAFH 190
                + P +IL RKMVKRG+ AATKVLV+W++  P LATWE+Y +LL+ YP FH
Sbjct: 1418 AGVPKVPVAILDRKMVKRGNIAATKVLVQWQDSPPNLATWEFYSELLKKYPDFH 1471


>gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1478

 Score = 1857 bits (4811), Expect = 0.0
 Identities = 901/1381 (65%), Positives = 1081/1381 (78%), Gaps = 23/1381 (1%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQV 4084
            P   RVRLASIHLEGLALQWHLNYMR +FD YP W +Y+ DV  RFGD +EDPL+ L+Q+
Sbjct: 100  PAVSRVRLASIHLEGLALQWHLNYMRQKFDIYPSWQQYITDVTARFGDAFEDPLSSLLQI 159

Query: 4083 KHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
            K    +Q ++D FELA TQV+++PEH+LSIFLA L+  TQ HVRMFNP++IA AANLAKL
Sbjct: 160  KQVGKIQDYVDQFELALTQVNLIPEHSLSIFLAGLEHHTQMHVRMFNPSTIAHAANLAKL 219

Query: 3903 HESTKITHQKPTQYKPPFTK---------------------TNQTVTTKEPSPTQKPIFT 3787
            HES   T  + +    PF+K                     T     +  PSPTQK    
Sbjct: 220  HESANSTAHRNSSRFSPFSKHQGLLTKPTISSTSSTPSPTSTTTPAASNNPSPTQKSA-P 278

Query: 3786 KTNKTMTPAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQE-EATSXXX 3610
            +  +T +  E ++RRAKGLCMFCDE FTPGH LKHRR Q+M +E++ DD    E      
Sbjct: 279  RPIRTFSANEQADRRAKGLCMFCDEVFTPGHQLKHRRAQLMWLELDDDDDSLIEECRPEP 338

Query: 3609 XXXXXXXXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAI 3430
                          Q+S QALTGV +Y TMRV GL+ KKLL ILLDSGSTHNFLD   A 
Sbjct: 339  SVPEPESLPSFDSPQLSCQALTGVANYHTMRVTGLHDKKLLHILLDSGSTHNFLDFEIAK 398

Query: 3429 QLGCKLEKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQW 3250
             LGCKL+ + P+ VTGGGG+KL A YICK F W +    F+AD+IVLPLVCCDLILGIQW
Sbjct: 399  SLGCKLDPISPLTVTGGGGHKLEAAYICKGFKWQLQQGHFTADVIVLPLVCCDLILGIQW 458

Query: 3249 LKSLGPILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVND 3070
            LKSLGPI+WDF+KL MEF+ QG +  LRG K PS+KLI+N++   AV +GA+LCFL ++ 
Sbjct: 459  LKSLGPIMWDFEKLQMEFTTQGRKFTLRGAKVPSLKLINNKSFAHAVAKGADLCFLSLSP 518

Query: 3069 TTPQFIIPSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDT 2890
            T P  + P+C V  +    S LP+ I  LL +Y DIF EPS+LPP RAGFDH+IPLKD  
Sbjct: 519  TAPSLVFPTCHVLNTCEPNSALPLSIAELLVEYVDIFEEPSQLPPLRAGFDHQIPLKDGV 578

Query: 2889 MPVNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRR 2710
             P N+RPYRYS IQK+I+D LV +M+ QGI+Q+S SPFASPT+LVRKKDGSWRLCVD+RR
Sbjct: 579  APFNLRPYRYSRIQKDIIDNLVKDMIDQGIVQHSTSPFASPTILVRKKDGSWRLCVDFRR 638

Query: 2709 LNHSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYE 2530
            LN  TIKDRFPIPLIEDLMDELGG+ VFSKLDLRSGYHQLRMA+GEEYKTAFKTHSGHYE
Sbjct: 639  LNELTIKDRFPIPLIEDLMDELGGSMVFSKLDLRSGYHQLRMAQGEEYKTAFKTHSGHYE 698

Query: 2529 YLVMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVAR 2350
            YLVMPFGLTNAPASFQSLMNH+FQ +LRKFVIIFFDD+L+YS SL+DH  HL  +F   R
Sbjct: 699  YLVMPFGLTNAPASFQSLMNHVFQPFLRKFVIIFFDDLLIYSKSLEDHVCHLRMIFQTVR 758

Query: 2349 HHKLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAG 2170
             + L LNK KC FA  +VEYLGHFIT  G+STDP KIQAV++WP+P+N+KQLRGFLGLAG
Sbjct: 759  DNHLLLNKSKCSFALPKVEYLGHFITVDGISTDPSKIQAVSSWPIPQNLKQLRGFLGLAG 818

Query: 2169 YYRRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILE 1990
            YYRRFVKDFGK+AKPLTDLLKKD F+WS++  +AF  LK ALVTAPVL LPDF K F++E
Sbjct: 819  YYRRFVKDFGKIAKPLTDLLKKDCFIWSENATSAFLNLKQALVTAPVLCLPDFTKKFVVE 878

Query: 1989 TDASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFI 1810
            TDASG GIGAVLMQ++HP+AYISK+LG KQQA+SIYE+E+LAIVYA+QKW +YL+H PF+
Sbjct: 879  TDASGTGIGAVLMQDHHPVAYISKSLGPKQQAMSIYEREMLAIVYAVQKWGSYLSHAPFV 938

Query: 1809 IRTDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTL 1630
            I+TDQKSIK+ML+Q+LNTPFQQ W+AKLMGF+FEIQY+EG  N AADALSR  GAE++ L
Sbjct: 939  IKTDQKSIKHMLDQKLNTPFQQVWVAKLMGFDFEIQYREGSSNLAADALSRKTGAELLIL 998

Query: 1629 VLNNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTA 1450
            +LNN S DLL+ IQLSW  D+ +  +I ++  +P  H K+SW  N LRR GKLV+G++  
Sbjct: 999  LLNNASTDLLQAIQLSWQSDSILNSIIQDLQKDPKIHPKFSWVRNELRRRGKLVIGANHD 1058

Query: 1449 VKSTLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPS 1270
            +K ++L WLHDSA GGHSGRD TL+R++SLFYWKGM KDV  YVR C +CQ+SKP+   S
Sbjct: 1059 IKLSILSWLHDSAIGGHSGRDVTLSRIRSLFYWKGMAKDVLNYVRNCGICQKSKPDLAAS 1118

Query: 1269 PGLLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVA 1090
            PGLLQPLPIP  IW  IS+DFIEGLP+S GKQVI VVVDRLSKYAHF+AL HPYTA +VA
Sbjct: 1119 PGLLQPLPIPTLIWTDISMDFIEGLPKSGGKQVIFVVVDRLSKYAHFMALAHPYTASDVA 1178

Query: 1089 QTFLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNK 910
            Q FLD+VFKLHGLP S  SDRDPIF+S FW+E F LQGV+LNKS+AYHPQSDGQ+EIVNK
Sbjct: 1179 QLFLDNVFKLHGLPESITSDRDPIFISTFWNEFFKLQGVALNKSSAYHPQSDGQTEIVNK 1238

Query: 909  ALETYLRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGES 730
             LETYLRCM S++P  W KWL LAE+WYNT +HSSI+TTPFEVVYGQPPP+HLPYLPG +
Sbjct: 1239 CLETYLRCMCSDKPTQWFKWLSLAEWWYNTNYHSSIRTTPFEVVYGQPPPIHLPYLPGAA 1298

Query: 729  NNSAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFT 550
             + +VDR+L ARE+ IKLL+FHLLRAQNRM+QQA+KHR+DRVF+IGD+V+LKLQPYRQ +
Sbjct: 1299 TSVSVDRSLIAREEVIKLLQFHLLRAQNRMSQQADKHRSDRVFSIGDFVYLKLQPYRQLS 1358

Query: 549  LRNQAFHKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIEH 370
            L++   HKL PKF+GP++V DRIG  AY L+LP +T  HNVFHVSQLK C NP    I+H
Sbjct: 1359 LKSHGVHKLLPKFYGPFKVLDRIGLAAYALDLPPSTVFHNVFHVSQLKLCPNPHHHPIQH 1418

Query: 369  -PAVPSVITSKGEPESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAF 193
             PA  S ++    P +IL RKMVKRGH AATKVLV+WK+  P+ ATWE+Y+DL++ +P F
Sbjct: 1419 LPAEISAVSK--VPTAILDRKMVKRGHVAATKVLVQWKDSPPDAATWEFYHDLIKKFPEF 1476

Query: 192  H 190
            H
Sbjct: 1477 H 1477


>dbj|GAU12723.1| hypothetical protein TSUD_122150 [Trifolium subterraneum]
          Length = 1492

 Score = 1857 bits (4810), Expect = 0.0
 Identities = 897/1386 (64%), Positives = 1093/1386 (78%), Gaps = 28/1386 (2%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQV 4084
            PP   VRLASIHL+GLALQWHLNYMR +FD YP W +YVADV  RFG+ YEDPL+ L+Q+
Sbjct: 109  PPASMVRLASIHLDGLALQWHLNYMRQKFDMYPTWNQYVADVTTRFGEAYEDPLSSLLQI 168

Query: 4083 KHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
            KH   VQ +ID +ELA TQV+++PEH+LSIFLA L+  TQ HVRMFNPTSIA AANLAKL
Sbjct: 169  KHAGKVQEYIDKYELALTQVNLIPEHSLSIFLAGLEHHTQMHVRMFNPTSIAHAANLAKL 228

Query: 3903 HESTKITHQKPTQYKPPFTKTN--------------QTVTTKEPSPTQ---KPIFTKTNK 3775
            HE++K T  K ++Y   ++K+N               + TT  PSP +   +P+   TN+
Sbjct: 229  HEASKETSPKISKYPFNYSKSNPIFPKPTTPNSSIPSSSTTTPPSPQKANLRPLQNHTNR 288

Query: 3774 TMTPAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEATSXXXXXXXX 3595
            T + +EM+ERR+KGLCMFCDE FTPGH LKHRR Q+M+ME+E DD  E  T         
Sbjct: 289  TFSASEMAERRSKGLCMFCDETFTPGHQLKHRRTQLMIMELE-DDEHETETLPPRDQTLT 347

Query: 3594 XXXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCK 3415
                     Q+SLQALTGV +YQTMR+ GL+ KKLL ILLDSGSTHNFLDL  A +LGCK
Sbjct: 348  NDIAHLENPQLSLQALTGVSNYQTMRISGLHDKKLLHILLDSGSTHNFLDLEMAKKLGCK 407

Query: 3414 LEKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLG 3235
            LE + P+ VTGGGG+ L APYIC+ F W +    F+AD+IVLPLVCCDLILGIQWLKSLG
Sbjct: 408  LEAIPPLTVTGGGGHLLKAPYICRGFQWVLQQTNFTADVIVLPLVCCDLILGIQWLKSLG 467

Query: 3234 PILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDTTPQF 3055
            PILWDFDKL MEF+ QG +  LRG K P ++L+ N++    V+QG ELCF+ + D TP F
Sbjct: 468  PILWDFDKLQMEFTTQGKKFVLRGAKAPKLQLVKNKSFAHIVQQGVELCFMSIEDHTPIF 527

Query: 3054 IIPSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMPVNI 2875
             +PSC   Q  ++   +P  I  ++EQ+ DIF  P++LPP R GFDHKIPLK+ T   N+
Sbjct: 528  YMPSCQAIQVASVPLTIPTPICHVIEQFEDIFQVPTQLPPPRTGFDHKIPLKEGTEAFNL 587

Query: 2874 RPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLNHST 2695
            RPYRYSI+QKNI+D+LV +M+ QGIIQ+S SPFASPTVLVRKKDGSWRLCVD+RRLN  T
Sbjct: 588  RPYRYSIVQKNIIDQLVQDMMAQGIIQHSTSPFASPTVLVRKKDGSWRLCVDFRRLNSHT 647

Query: 2694 IKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYLVMP 2515
            IKDRFPIPL+EDL+DELGG+S+FSKLD++SGYHQLRMA GEE+KTAFKTHSGHYEYLVMP
Sbjct: 648  IKDRFPIPLLEDLLDELGGSSIFSKLDMKSGYHQLRMAPGEEHKTAFKTHSGHYEYLVMP 707

Query: 2514 FGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHHKLF 2335
            FGLTNAPASFQ+LMNH+F  YLRKFVIIFFDDILVYS    DH  HL+ VF   + + L 
Sbjct: 708  FGLTNAPASFQALMNHVFAPYLRKFVIIFFDDILVYSQCSADHEIHLAIVFQTIKDNGLL 767

Query: 2334 LNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYYRRF 2155
            LN+ KC FAT  VEYLGHFIT+ GVSTDP KI AVN+WP+PKN+KQLRGFLGLAGYYRRF
Sbjct: 768  LNRSKCRFATTCVEYLGHFITKEGVSTDPSKISAVNSWPIPKNLKQLRGFLGLAGYYRRF 827

Query: 2154 VKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETDASG 1975
            VKDFGK+A+PLTDLLK+D F W+  +  AF+ LK AL +APVL LPDF K F++ETDASG
Sbjct: 828  VKDFGKIAQPLTDLLKRDNFHWNQRSTDAFESLKQALTSAPVLQLPDFSKKFVVETDASG 887

Query: 1974 KGIGAVLMQENHPIAYISKALGFKQQALSIYE---------KELLAIVYAIQKWSTYLAH 1822
             G+GAVLMQ+ HPIAYISK+LG +QQALS+YE         +ELLAI+YA+QKW  YL+H
Sbjct: 888  CGLGAVLMQDKHPIAYISKSLGPRQQALSVYERELLAIIYARELLAIIYAVQKWGAYLSH 947

Query: 1821 RPFIIRTDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAE 1642
             PF I+TDQKSIKY+LEQ+LNTPFQQAW++KLMGFEF+IQYKEG  N AADALSR EGAE
Sbjct: 948  APFTIKTDQKSIKYILEQKLNTPFQQAWVSKLMGFEFDIQYKEGVLNTAADALSRKEGAE 1007

Query: 1641 MMTLVLNNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVG 1462
            ++  +L++    L+ QI+ SW+ DA + K+I E+T +P +HSK+SW    LRR GKLVVG
Sbjct: 1008 LLVSLLDSNIPSLMDQIKASWDSDATLTKIIDELTVDPSTHSKFSWAKEELRRKGKLVVG 1067

Query: 1461 SDTAVKSTLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPE 1282
            ++  +K  ++ W+H+SAAGGHSGRDNT AR+KSLF+WKG+ KDV  Y+R C +CQ  KP+
Sbjct: 1068 NNIELKQQIMHWMHNSAAGGHSGRDNTAARIKSLFFWKGLFKDVQQYIRNCKICQTCKPD 1127

Query: 1281 QIPSPGLLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTA 1102
               SPGLLQPLPIP  +W  IS+DFI+GLP S GK VI VVVDRLSKYAHF+ L HPY+A
Sbjct: 1128 LAASPGLLQPLPIPSLVWYDISMDFIDGLPASSGKHVIFVVVDRLSKYAHFIPLAHPYSA 1187

Query: 1101 LEVAQTFLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSE 922
            L+VAQ FLD++FKLHG+P+S  SDRDPIFLS+FW+E F+LQGV+LNKSTAYHPQ+DGQ++
Sbjct: 1188 LDVAQVFLDNIFKLHGMPNSITSDRDPIFLSQFWTEFFTLQGVALNKSTAYHPQTDGQTK 1247

Query: 921  IVNKALETYLRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYL 742
            I+NK+LETYLRCM +E+PQ W KWL LAE+WYNT+FHS+I++TPFEVVYGQPPP++LPYL
Sbjct: 1248 IINKSLETYLRCMCAEKPQAWSKWLSLAEWWYNTSFHSAIQSTPFEVVYGQPPPMNLPYL 1307

Query: 741  PGESNNSAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPY 562
            PGES N  VDR+LTARE+AIKLL+FHLLRAQNRM QQA+KHR+DR F++GDYVFLKL PY
Sbjct: 1308 PGESTNLTVDRSLTAREEAIKLLKFHLLRAQNRMKQQADKHRSDRKFSVGDYVFLKLHPY 1367

Query: 561  RQFTLRNQAFHKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAA 382
            +Q ++R   FHKL PK++GP+++ D+IG+ AYQLELP   +IHNVFHVSQLK C NP  A
Sbjct: 1368 KQHSMRKTKFHKLLPKYYGPFKILDKIGAAAYQLELPRDVEIHNVFHVSQLKLCHNPDTA 1427

Query: 381  VIEHPAVPSVITSKGE--PESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLR 208
             + +  +P  +T      PESIL RKMVKRG  AATKVLVKWK+  PE+ATWE+YYDLL+
Sbjct: 1428 EVYN--IPGFMTKPPTRIPESILDRKMVKRGRVAATKVLVKWKDTPPEMATWEYYYDLLQ 1485

Query: 207  DYPAFH 190
             +P FH
Sbjct: 1486 RFPTFH 1491


>gb|PNY17651.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1478

 Score = 1824 bits (4725), Expect = 0.0
 Identities = 883/1383 (63%), Positives = 1089/1383 (78%), Gaps = 25/1383 (1%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQV 4084
            P    VRLASIHL+GLALQWHLNYMR +FD YP W +YV DV  RFGD +EDPLA L+Q+
Sbjct: 98   PATSMVRLASIHLDGLALQWHLNYMRQKFDIYPSWTQYVTDVTMRFGDAFEDPLATLLQI 157

Query: 4083 KHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
            +HT  V+ +ID FELA TQV+++PEH+LS+FLA L+  TQ HVRMFNPTSIA AANLAKL
Sbjct: 158  QHTGKVKDYIDQFELALTQVNLIPEHSLSMFLAGLNHNTQMHVRMFNPTSIAHAANLAKL 217

Query: 3903 HESTKITHQKPT-QYKPPFTKTNQTV------------TTKEPSPTQKPIFTKTNKTM-- 3769
            HES   T  KP+ +Y   + KT   +             T+ PS   KP  T   +TM  
Sbjct: 218  HESGNETMAKPSSKYSYTYPKTPPILPKPITPQNTPPSNTQTPSSPHKPNTTNRFQTMRN 277

Query: 3768 ----TPAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGD----DTQEEATSXX 3613
                +  EM++RRAKGLCMFCDEPFTPGH LKHRR Q+++ME+E D    D      +  
Sbjct: 278  TRSYSAEEMADRRAKGLCMFCDEPFTPGHQLKHRRSQLLVMELEDDEPVLDELTHVVTQD 337

Query: 3612 XXXXXXXXXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKA 3433
                           QMSLQAL+G+ +YQTMR+  L+ K +LQIL+DSGSTHNFLDL  A
Sbjct: 338  IPDSSTIVSHTIDKPQMSLQALSGMTNYQTMRISALHNKNILQILIDSGSTHNFLDLEMA 397

Query: 3432 IQLGCKLEKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQ 3253
             +LGCKLE + P+++TGGGG+ L AP+ICK F+W M   +F AD+IVLPLVCCDLILGIQ
Sbjct: 398  KKLGCKLEPIPPLQITGGGGHTLEAPFICKSFSWVMQQTKFQADVIVLPLVCCDLILGIQ 457

Query: 3252 WLKSLGPILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVN 3073
            WLK+LGPI+WDF+KL MEFS QG +  LRG KT S+K ++N++ +  V+ G E+CFL + 
Sbjct: 458  WLKTLGPIVWDFEKLQMEFSQQGRKFVLRGAKTSSLKEVNNKSFSQVVKTGVEMCFLSLA 517

Query: 3072 DTTPQFIIPSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDD 2893
            +      +P+C++ ++    + L   +E LL+Q+ DIF EP+ LPP R GFDHKIP+K+ 
Sbjct: 518  ENAAHLFMPTCNLFETSDPATPLASRLEHLLQQFDDIFAEPTTLPPLRHGFDHKIPIKEG 577

Query: 2892 TMPVNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYR 2713
            T   N+RPYRYS +QKNI+DKLV +M TQGIIQ+SNSP+ASPTVLVRKKDGSWRLCVD+R
Sbjct: 578  TDAFNLRPYRYSTVQKNIIDKLVEDMFTQGIIQHSNSPYASPTVLVRKKDGSWRLCVDFR 637

Query: 2712 RLNHSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHY 2533
            RLN  TIKDRFPIPLIEDLMDELGGAS+FSKLD+RSGYHQLRMA+G+E+KTAFKTHSGH+
Sbjct: 638  RLNSCTIKDRFPIPLIEDLMDELGGASIFSKLDMRSGYHQLRMAKGDEHKTAFKTHSGHF 697

Query: 2532 EYLVMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVA 2353
            EYLVMPFGLTNAPASFQ+LMNH+F+ +LRKFVI+FFDDIL+YS+S+  H  HL+QVF   
Sbjct: 698  EYLVMPFGLTNAPASFQALMNHIFKPFLRKFVIVFFDDILIYSSSMDQHVSHLAQVFLTI 757

Query: 2352 RHHKLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLA 2173
            R H L+LNK KC FA  +VEYLGHF++  GVSTDP KI AV +WP+PKN+KQLRGFLGLA
Sbjct: 758  REHMLYLNKTKCQFAATKVEYLGHFLSAQGVSTDPAKISAVKDWPLPKNLKQLRGFLGLA 817

Query: 2172 GYYRRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFIL 1993
            GYYRRFVKDFGK+++PLTD+LKKD F W+D  + AF  LK +L+TAPVL LPDF K FI+
Sbjct: 818  GYYRRFVKDFGKISQPLTDMLKKDNFHWNDLAKHAFSNLKQSLITAPVLQLPDFTKKFIV 877

Query: 1992 ETDASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPF 1813
            ETDASGKGIGAVLMQ  HPIA+ISK+LG +QQA+S+YE+ELLAI+YA+QKW  YL+H PF
Sbjct: 878  ETDASGKGIGAVLMQNKHPIAFISKSLGPRQQAMSVYERELLAIIYAVQKWGAYLSHAPF 937

Query: 1812 IIRTDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMT 1633
            II+TDQKSIK++LEQ+LNTPFQQAW++KLMGFEFEIQYKEG  N AADALSR EGAE++ 
Sbjct: 938  IIKTDQKSIKHILEQKLNTPFQQAWVSKLMGFEFEIQYKEGTTNLAADALSRKEGAELLL 997

Query: 1632 LVLNNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDT 1453
            L ++  S DL+ +I+ SW++D  + +++ ++ +N  SH K++W  N LRR GKLV+G+D 
Sbjct: 998  LAIDAASPDLMTKIRDSWSKDPTLARIVTDLKSNTSSHPKFTWIRNELRRKGKLVIGADV 1057

Query: 1452 AVKSTLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIP 1273
            ++K+T+L WLH SAAGGHSGRD+T AR+KSLF+WKGM KD+  ++R C +CQ  K +Q  
Sbjct: 1058 SLKNTILGWLHSSAAGGHSGRDSTGARIKSLFFWKGMMKDIQNFIRNCSICQTCKYDQAT 1117

Query: 1272 SPGLLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEV 1093
            SPG LQPLPIP  IW  IS+DFIEGLP S GKQVI VVVDRLSKYAHF++L HPYTA +V
Sbjct: 1118 SPGSLQPLPIPSLIWVDISMDFIEGLPMSAGKQVIFVVVDRLSKYAHFMSLAHPYTAADV 1177

Query: 1092 AQTFLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVN 913
            AQ FLD+VFKLHG+P++  SDRDPIFLS FW++LF+LQGV+LNKSTAYHPQSDGQ+EIVN
Sbjct: 1178 AQVFLDNVFKLHGMPNTITSDRDPIFLSRFWNDLFTLQGVALNKSTAYHPQSDGQTEIVN 1237

Query: 912  KALETYLRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGE 733
            K LETYLRCM SE+P  W KWL LAE+WYNT FHS+I +TPFE+VYGQPPP+HLPYLPGE
Sbjct: 1238 KGLETYLRCMCSEKPHTWSKWLSLAEWWYNTNFHSAIHSTPFEIVYGQPPPIHLPYLPGE 1297

Query: 732  SNNSAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQF 553
            S    VDRTL+ARE+AI+LL+FHLLRAQNRM  QAN+HR+ R F I D+VFLKLQPYRQ 
Sbjct: 1298 SPVPTVDRTLSAREEAIQLLKFHLLRAQNRML-QANQHRSHRHFEINDFVFLKLQPYRQM 1356

Query: 552  TLRNQAFHKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIE 373
            +L+    HKL PK++GP++V D++G VAY+LELP+   IHNVFHVSQLK+CTNPS   I 
Sbjct: 1357 SLKPHRAHKLLPKYYGPFKVIDKVGQVAYKLELPADAAIHNVFHVSQLKKCTNPS--TIT 1414

Query: 372  HPAVPSVITS--KGEPESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYP 199
            +P +P+ IT      PE IL RKMVKRG +AATKVLV+WK+  P++ATWE+YYDLL+ +P
Sbjct: 1415 NPLIPTFITDIPTRIPEMILDRKMVKRGSQAATKVLVQWKDTPPDMATWEFYYDLLKKFP 1474

Query: 198  AFH 190
             FH
Sbjct: 1475 NFH 1477


>dbj|GAU25735.1| hypothetical protein TSUD_216660 [Trifolium subterraneum]
          Length = 1417

 Score = 1780 bits (4611), Expect = 0.0
 Identities = 863/1313 (65%), Positives = 1030/1313 (78%), Gaps = 22/1313 (1%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQV 4084
            P   RVRLASIHL+GLALQWHLNYMR +FD YP W +Y++DV  RFG+ YEDPL+ L+Q+
Sbjct: 99   PESSRVRLASIHLDGLALQWHLNYMRQKFDIYPSWQQYISDVTTRFGEAYEDPLSSLLQI 158

Query: 4083 KHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
            KH   +Q +ID FELA TQV+++PEH+LSIFLA L+  TQ HVRMFNPTSIA AANLAKL
Sbjct: 159  KHVGKIQDYIDQFELALTQVNMIPEHSLSIFLAGLEHHTQMHVRMFNPTSIAHAANLAKL 218

Query: 3903 HESTKITHQKPTQYKPPFTKT-------NQTV---------------TTKEPSPTQKPIF 3790
            HES+    Q+      PF KT       N T+               T    S T K   
Sbjct: 219  HESSNPPSQRNASRFSPFNKTQGVFAKPNSTLPFPSSTSNNSSSSSPTNSSNSSTPKSTS 278

Query: 3789 TKTNKTMTPAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEATSXXX 3610
             +  +T + AEM++RRAKGLCMFCD  FTPGH +KHRR Q+++ME+E DD          
Sbjct: 279  NRPIRTFSAAEMNDRRAKGLCMFCDGLFTPGHQVKHRRAQILVMEIEDDDIVTAEPIADP 338

Query: 3609 XXXXXXXXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAI 3430
                          Q+SLQAL GV +YQTMRV G++ KKLL ILLDSGSTHNFLDL  A 
Sbjct: 339  ILSESEPVHDFEHPQLSLQALNGVANYQTMRVTGMHEKKLLHILLDSGSTHNFLDLEVAK 398

Query: 3429 QLGCKLEKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQW 3250
             LGCKLE + P+ V GGGG++L A ++CK F W +    F+AD+IVLPL CCDLILGIQW
Sbjct: 399  SLGCKLEAIPPLSVIGGGGHQLEAAFVCKGFKWQLQQVLFTADVIVLPLGCCDLILGIQW 458

Query: 3249 LKSLGPILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVND 3070
            LKSLGPILWDFDKL MEF+  G +  LRG K P  KLI+N++   AV++GAELCFL ++ 
Sbjct: 459  LKSLGPILWDFDKLQMEFTTHGKKFVLRGAKVPGFKLINNKSFAQAVQKGAELCFLSISH 518

Query: 3069 TTPQFIIPSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDT 2890
              P    P+C V Q+  LQS L   I  L+ ++ DIFNEP +LPP R GFDH+IPLK+  
Sbjct: 519  DAPCLTFPTCHVMQTPELQSPLHPAIVDLILKFEDIFNEPGQLPPPRPGFDHRIPLKEGA 578

Query: 2889 MPVNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRR 2710
             P N+RPYR+S+IQK+I+DKLV +ML QGI+Q+SNS FASPT+LVRKKDGSWRLC+D+RR
Sbjct: 579  EPFNLRPYRFSLIQKDIIDKLVQDMLDQGIVQHSNSLFASPTILVRKKDGSWRLCIDFRR 638

Query: 2709 LNHSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYE 2530
            LN  TIKDRFPIPLIEDLMDEL G+ VFSKLD++SGYHQLRMA GEE+KTAFKTHSGH+E
Sbjct: 639  LNDLTIKDRFPIPLIEDLMDELSGSVVFSKLDMKSGYHQLRMAPGEEHKTAFKTHSGHFE 698

Query: 2529 YLVMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVAR 2350
            YLVMPFGLTNAPASFQSLMN +F  +LRKFVIIFFD +L+YS S++DH  HL  +F   R
Sbjct: 699  YLVMPFGLTNAPASFQSLMNQVFSSFLRKFVIIFFDVLLIYSKSMEDHIVHLQLIFQTIR 758

Query: 2349 HHKLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAG 2170
             H LFLNK KC FA  +VEYLGHFIT+ GVSTDP K+QAVN+WP P+N+KQLRGFLGLAG
Sbjct: 759  DHNLFLNKSKCSFALPKVEYLGHFITKEGVSTDPAKVQAVNSWPPPQNLKQLRGFLGLAG 818

Query: 2169 YYRRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILE 1990
            YYRRFVKDFGK+AKPLTDLLKKD+F+WS+S   AF  LK AL +APVL LPDF K F++E
Sbjct: 819  YYRRFVKDFGKLAKPLTDLLKKDSFVWSESATQAFLQLKQALTSAPVLCLPDFSKPFVVE 878

Query: 1989 TDASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFI 1810
            TDASGKGIGAVLMQE+HP+AYISK+LG KQQA+SIYE+ELLAIVYA+QKW +YL+H PFI
Sbjct: 879  TDASGKGIGAVLMQEHHPVAYISKSLGPKQQAMSIYERELLAIVYAVQKWGSYLSHAPFI 938

Query: 1809 IRTDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTL 1630
            I+TDQKSIK+ML+Q+LNTPFQQ W+AKL+GF+FEI YKEG  N AADALSR  GAE++ L
Sbjct: 939  IKTDQKSIKHMLDQKLNTPFQQVWVAKLLGFDFEIHYKEGPSNLAADALSRKTGAELLPL 998

Query: 1629 VLNNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTA 1450
            VL+N   DLL+ I+LSW  D  +  +I ++  +P +H K+SW    LRR GKLV+G D+ 
Sbjct: 999  VLSNAGPDLLEAIKLSWPHDPHLNSIILDLQKDPNTHPKFSWLRGELRRKGKLVIGPDSG 1058

Query: 1449 VKSTLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPS 1270
            VK+++ +WLH+S+ GGHSGRD T +R+KSLFYWKGM KD+  YV+ C VCQRSKP+   S
Sbjct: 1059 VKNSIFKWLHNSSLGGHSGRDITASRIKSLFYWKGMAKDIIGYVKNCGVCQRSKPDLAAS 1118

Query: 1269 PGLLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVA 1090
            PGLLQPL IP +IW  IS+DFIEGLP S GKQVI VVVDRLSKYAHF+AL HPYTAL++A
Sbjct: 1119 PGLLQPLSIPSQIWTDISMDFIEGLPPSFGKQVIFVVVDRLSKYAHFMALAHPYTALDIA 1178

Query: 1089 QTFLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNK 910
            Q FLD+VFKLHGLP S  SDRDPIFLS FW+E F LQGV+LNKSTAYHPQSDGQ+EIVNK
Sbjct: 1179 QLFLDNVFKLHGLPESITSDRDPIFLSTFWTEFFKLQGVALNKSTAYHPQSDGQTEIVNK 1238

Query: 909  ALETYLRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGES 730
             LETYLRCM S++P  W KWL LAE+WYNT +HSS  TTPFEVVYGQPPP+HLPYLPG S
Sbjct: 1239 CLETYLRCMCSDKPTQWSKWLSLAEWWYNTNYHSSTHTTPFEVVYGQPPPIHLPYLPGSS 1298

Query: 729  NNSAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFT 550
            ++ +VDR+L ARE+AIKLL+FH+LRAQNRM+QQANKHR+DR+FAIGDYV+LKLQPYRQ +
Sbjct: 1299 DSLSVDRSLLAREEAIKLLKFHMLRAQNRMSQQANKHRSDRIFAIGDYVYLKLQPYRQLS 1358

Query: 549  LRNQAFHKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNP 391
            L++  FHKL PKF+GP+RV DR+GSVAYQLELP +  IHNVFHVSQLK C NP
Sbjct: 1359 LKSHGFHKLLPKFYGPFRVLDRVGSVAYQLELPPSAAIHNVFHVSQLKLCPNP 1411


>gb|PNX93486.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1414

 Score = 1736 bits (4497), Expect = 0.0
 Identities = 847/1347 (62%), Positives = 1028/1347 (76%), Gaps = 14/1347 (1%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQV 4084
            P    VRLASIHL+GLALQWHLNYMR +FD YP W +Y+ DV  RFGD YEDPL+ L+Q+
Sbjct: 99   PATSMVRLASIHLDGLALQWHLNYMRQKFDIYPSWQQYITDVTARFGDAYEDPLSSLLQI 158

Query: 4083 KHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
            KH   +Q +ID FELA TQVS++PEH+LSIFLA L+  TQ HVRMFNPT+IA AANLAKL
Sbjct: 159  KHVGKIQEYIDKFELALTQVSLIPEHSLSIFLAGLEYHTQMHVRMFNPTNIAHAANLAKL 218

Query: 3903 HESTK----------ITHQKPTQYKPPFTKTNQTVTTKEPS----PTQKPIFTKTNKTMT 3766
            HES++           +   P+  K    +T+ T   + P     P  KP+F+KTN+T++
Sbjct: 219  HESSRDIKTQGRFSAFSKYSPSSSKSSPNQTSNTSLVQTPPTPNVPNPKPLFSKTNRTVS 278

Query: 3765 PAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEATSXXXXXXXXXXX 3586
             AEM +RRAKGLCMFCDE FTPGH LKHRR  MM+ME++ D+  E+              
Sbjct: 279  AAEMEDRRAKGLCMFCDEVFTPGHQLKHRRSHMMVMELDEDELGEKEIDSVAITENVDIP 338

Query: 3585 XXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCKLEK 3406
                   +SLQALTG+  YQTMRV GL+ KK++ ILLDSGSTHNFLDL  A +LGCKLE 
Sbjct: 339  VFDSPQ-LSLQALTGISHYQTMRVTGLHEKKMIHILLDSGSTHNFLDLELAKKLGCKLEA 397

Query: 3405 VKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLGPIL 3226
            + P+ VT GGG+KL A +ICK F W +    F+AD+IVLPL C DLILGIQWLKSLGPIL
Sbjct: 398  ISPLAVTSGGGHKLQAAFICKGFKWLLQQTVFTADVIVLPLGCSDLILGIQWLKSLGPIL 457

Query: 3225 WDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDTTPQFIIP 3046
            WDF+KL MEF+ +G +  LRG K PS+KL++N++   A++ GAE+CFL +        IP
Sbjct: 458  WDFEKLQMEFTTKGKKFVLRGAKVPSIKLVNNKSFAHAMQNGAEVCFLTICQPAQNLDIP 517

Query: 3045 SCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMPVNIRPY 2866
            +C + Q       +P  I  +L+++ DIF EPS LPP R GFDH IPLK+ + P N++PY
Sbjct: 518  TCLLLQPADADFPIPTLIAQVLQEFPDIFKEPSALPPHRLGFDHNIPLKEGSEPFNMKPY 577

Query: 2865 RYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLNHSTIKD 2686
            RYS+IQK I+D L+ EML QGIIQ+SNSPF+SPTVLVRKKDGSWRLCVD+RRLNH TIKD
Sbjct: 578  RYSLIQKTIIDNLITEMLNQGIIQHSNSPFSSPTVLVRKKDGSWRLCVDFRRLNHLTIKD 637

Query: 2685 RFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYLVMPFGL 2506
            RFPIPLIEDL+DEL G+S+FSKLDL+SGYHQLRMA+GEEYKTAFKTHSGHYEYLVMPFGL
Sbjct: 638  RFPIPLIEDLLDELSGSSIFSKLDLKSGYHQLRMAKGEEYKTAFKTHSGHYEYLVMPFGL 697

Query: 2505 TNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHHKLFLNK 2326
            TNAPASFQ+LMNHLF+ +LRKFVIIFFDD+L+YS SLQ+H++HL+ +F + RH+ LFLN+
Sbjct: 698  TNAPASFQALMNHLFKPFLRKFVIIFFDDLLIYSKSLQEHTEHLNSIFQLIRHNNLFLNQ 757

Query: 2325 KKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYYRRFVKD 2146
            KKC FAT RVEYLGHFITQ GVSTDP KI+AV NWP P  +KQLRGFLGLAGYYRRFVKD
Sbjct: 758  KKCTFATSRVEYLGHFITQEGVSTDPAKIEAVGNWPFPTTLKQLRGFLGLAGYYRRFVKD 817

Query: 2145 FGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETDASGKGI 1966
            FGK+AKPLTD+LK+D F+WS  +  AF  LK AL++AP+L LPDF K FI+ETDASGKGI
Sbjct: 818  FGKIAKPLTDMLKRDNFVWSSDSTNAFTQLKQALISAPLLSLPDFSKKFIVETDASGKGI 877

Query: 1965 GAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFIIRTDQKSI 1786
            GAVLMQ++HPIAYISK+LG KQQ +S+YE+ELLAIVYA+QKW  YLAH PFII+TDQ+SI
Sbjct: 878  GAVLMQDHHPIAYISKSLGPKQQVMSVYERELLAIVYAVQKWGAYLAHAPFIIKTDQRSI 937

Query: 1785 KYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLVLNNVSND 1606
            K++LEQRLNT FQQAW+AKLMGF+FEI YKEG  N AADALSR EGAE++ ++LN+ S D
Sbjct: 938  KHILEQRLNTAFQQAWVAKLMGFDFEIHYKEGAHNVAADALSRKEGAELLPMILNSASTD 997

Query: 1605 LLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAVKSTLLQW 1426
            L   I+  W  D  +Q+LI ++  NP SH K++W    LRR GKLV+G +T ++ ++LQW
Sbjct: 998  LYDSIKACWYSDMVLQQLIQDLQQNPNSHPKFTWVRGELRRRGKLVIGHNTQLQESILQW 1057

Query: 1425 LHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSPGLLQPLP 1246
            LHDSA GGHSGRD T+AR+KSLF+WKGM KD+H Y++ CVVCQR+K +    PGLL PLP
Sbjct: 1058 LHDSAVGGHSGRDCTIARVKSLFFWKGMAKDIHNYIKNCVVCQRNKSDLSACPGLLHPLP 1117

Query: 1245 IPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQTFLDSVF 1066
            IP +IW  IS+DFIEGLP S GK VILVVVDRLSKYAHF+ L HPYTA+++A+ FLD+VF
Sbjct: 1118 IPTKIWVDISMDFIEGLPPSTGKHVILVVVDRLSKYAHFIPLSHPYTAMDIAKVFLDNVF 1177

Query: 1065 KLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKALETYLRC 886
            KLHGLP S  +DRDPIFLS+FW+E F LQGV LNKSTAYHPQSDGQ+EIVNKA+ETYLR 
Sbjct: 1178 KLHGLPDSITNDRDPIFLSKFWNEFFKLQGVELNKSTAYHPQSDGQTEIVNKAVETYLR- 1236

Query: 885  MTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGESNNSAVDRT 706
                                               VYGQPPP+HLPYLPG S++  VDR+
Sbjct: 1237 ----------------------------------FVYGQPPPIHLPYLPGASDSVTVDRS 1262

Query: 705  LTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFTLRNQAFHK 526
            L ARE+A+KLL+FHLLRAQNRM QQA+KHR+DR F IGD+V+LKLQPYRQ + +    +K
Sbjct: 1263 LLAREEAMKLLKFHLLRAQNRMIQQADKHRSDRKFEIGDFVYLKLQPYRQMSAKPHVHNK 1322

Query: 525  LNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIEHPAVPSVIT 346
            L PKFFGP++V D++G VAYQLELP++  IHNVFHVSQLK C NP++     P   +   
Sbjct: 1323 LLPKFFGPFKVLDKVGQVAYQLELPASVNIHNVFHVSQLKLCPNPASTTFV-PITVATDQ 1381

Query: 345  SKGEPESILARKMVKRGHRAATKVLVK 265
                P+ IL RKMV+RG RAATKVL K
Sbjct: 1382 QARTPDMILDRKMVRRGRRAATKVLDK 1408


>gb|PNY17582.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 1251

 Score = 1649 bits (4269), Expect = 0.0
 Identities = 801/1257 (63%), Positives = 982/1257 (78%), Gaps = 23/1257 (1%)
 Frame = -3

Query: 3960 HVRMFNPTSIAQAANLAKLHESTKITHQKPTQYKPPFTKTNQTVTTKEPSPTQKPIFTKT 3781
            HVRMFNP +IA A NLAKLHE++K T  KP +Y   + K+N  ++     PT  P    +
Sbjct: 2    HVRMFNPPTIAHAVNLAKLHEASKNTPLKPYRYSGNYPKSNSILS----KPTTPPHSLPS 57

Query: 3780 NKTMTPA-----------------EMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEM 3652
            +   TP                  EM ERR+KGLCM+CDEPFTPGH LKHRR ++M+ME 
Sbjct: 58   SSLNTPPSPQKANPKPHHFRRSANEMEERRSKGLCMYCDEPFTPGHQLKHRRTELMVMEF 117

Query: 3651 EGDDTQEE----ATSXXXXXXXXXXXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQ 3484
            + D+   E    A +                 Q+S+QAL+G+P+YQTMR+  L+ KKLLQ
Sbjct: 118  DDDEPVLEELTHAVTQDIPESSTVVSHNIDTPQLSVQALSGMPNYQTMRISALHNKKLLQ 177

Query: 3483 ILLDSGSTHNFLDLNKAIQLGCKLEKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSA 3304
            IL+DSGSTHNFLDL  A +LGCKLE + P+++T GGG+ L AP+ICK F W M   +F A
Sbjct: 178  ILIDSGSTHNFLDLEMAKKLGCKLEPISPIQITAGGGHTLEAPFICKSFKWVMQQTQFQA 237

Query: 3303 DMIVLPLVCCDLILGIQWLKSLGPILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEA 3124
            D+IVLPLVCCDLILGIQWLK+LGPI+WDF+KL MEFS QG +  LRG KT S+K+++N++
Sbjct: 238  DVIVLPLVCCDLILGIQWLKTLGPIVWDFEKLQMEFSQQGRKFVLRGAKTSSLKVVNNKS 297

Query: 3123 MNAAVEQGAELCFLQVNDTTPQFIIPSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSE 2944
             +  V+ G ++CFL + +      +P+C++  +       P  ++ LL+Q+ DIF+EPS 
Sbjct: 298  FSQVVKTGVDMCFLSLAENEAHLFMPTCNLFDAADPALPFPSLLDHLLQQFDDIFSEPST 357

Query: 2943 LPPSRAGFDHKIPLKDDTMPVNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPT 2764
            LPP R GFDHKIP+K+ T   N+RPYRYS +QKNI+DKLV EM TQGIIQ+SNSP++SPT
Sbjct: 358  LPPPRPGFDHKIPIKEGTDAFNLRPYRYSTVQKNIIDKLVEEMFTQGIIQHSNSPYSSPT 417

Query: 2763 VLVRKKDGSWRLCVDYRRLNHSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRM 2584
            VLVRKKDGSWRLCVD+RRLN  TIKDRFPIPLIEDLMDELGGAS+FSKLD+RSGYHQLRM
Sbjct: 418  VLVRKKDGSWRLCVDFRRLNSCTIKDRFPIPLIEDLMDELGGASIFSKLDMRSGYHQLRM 477

Query: 2583 AEGEEYKTAFKTHSGHYEYLVMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYS 2404
            A GEE+KTAFKTHSGH+EYLVMPFGLTNAPASFQ+ MNH+F+ +LRKFVIIFFDDIL+YS
Sbjct: 478  AIGEEHKTAFKTHSGHFEYLVMPFGLTNAPASFQAFMNHIFKPFLRKFVIIFFDDILIYS 537

Query: 2403 ASLQDHSKHLSQVFDVARHHKLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNN 2224
            +S+  H  HL+QVF   R H LFLNK KC FA+++VEYLGHF++  GVSTDP KI AV +
Sbjct: 538  SSMDQHLSHLTQVFLTIREHHLFLNKAKCQFASNKVEYLGHFLSAQGVSTDPAKISAVKD 597

Query: 2223 WPVPKNIKQLRGFLGLAGYYRRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNAL 2044
            WP+PKN+KQLRGFLGLAGYYRRFVKDFG +++PLTDLLKKD F W+   + AF  LK +L
Sbjct: 598  WPLPKNLKQLRGFLGLAGYYRRFVKDFGTISQPLTDLLKKDNFHWNALAKQAFSNLKQSL 657

Query: 2043 VTAPVLILPDFGKTFILETDASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELLA 1864
            VTAPVL LPDF K F +ETDASGKGIGAVLMQ  HPIAYISK+LG +QQA+S+YE+ELLA
Sbjct: 658  VTAPVLQLPDFTKKFTVETDASGKGIGAVLMQNKHPIAYISKSLGPRQQAMSVYERELLA 717

Query: 1863 IVYAIQKWSTYLAHRPFIIRTDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKE 1684
            I+YA+QKW  YL+H PFII+TDQKSIK++LEQ+LNTPFQQAW++KLMGFEFEIQYKEG  
Sbjct: 718  IIYAVQKWGAYLSHAPFIIKTDQKSIKHILEQKLNTPFQQAWVSKLMGFEFEIQYKEGNT 777

Query: 1683 NKAADALSRVEGAEMMTLVLNNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSW 1504
            N AADALSR EGAE++ + L+  S+DL+ +I+ SW+ D  + K++ ++ +NP SH K++W
Sbjct: 778  NLAADALSRKEGAELLMMALDVASDDLMTKIRNSWSSDPTLAKIVTDLQSNPSSHPKFTW 837

Query: 1503 KNNLLRRNGKLVVGSDTAVKSTLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHT 1324
              N LRR GKLVVGSD A+K+T+L WLH S+AGGHSGRD+T AR+KS+F+WKGM KD+  
Sbjct: 838  IRNELRRKGKLVVGSDVALKNTILDWLHSSSAGGHSGRDSTSARIKSIFFWKGMMKDIQN 897

Query: 1323 YVRECVVCQRSKPEQIPSPGLLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLS 1144
            ++R C +CQ  K +Q  SPG LQPLPIP  IW  IS+DFIEGLP S GKQVI VVVDRLS
Sbjct: 898  FIRNCSICQTCKYDQAASPGSLQPLPIPSLIWVDISMDFIEGLPMSAGKQVIFVVVDRLS 957

Query: 1143 KYAHFLALHHPYTALEVAQTFLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLN 964
            KYAHF++L HPYTA +VAQ FLD+VFKLHG+P++  SDRDPIFLS+FW++ F+LQGV+LN
Sbjct: 958  KYAHFMSLAHPYTAADVAQLFLDNVFKLHGMPNTITSDRDPIFLSQFWNDFFTLQGVALN 1017

Query: 963  KSTAYHPQSDGQSEIVNKALETYLRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFE 784
            KSTAYHPQSDGQ+EIVNK LETYLRCM SE+PQ W KWL LAE+WYNT FHS+I +TPFE
Sbjct: 1018 KSTAYHPQSDGQTEIVNKGLETYLRCMCSEKPQTWSKWLSLAEWWYNTNFHSAIHSTPFE 1077

Query: 783  VVYGQPPPVHLPYLPGESNNSAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRV 604
            +VYGQPPPVHLPYLPGES   AVDRTL ARE+AIK+L+FHLLRAQNRM  QA   R++R 
Sbjct: 1078 IVYGQPPPVHLPYLPGESPVPAVDRTLGAREEAIKVLKFHLLRAQNRML-QATLRRSNRC 1136

Query: 603  FAIGDYVFLKLQPYRQFTLRNQAFHKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVF 424
            F I D+VFLKLQPYRQ +L+    HKL PK++GP+++ D++G VAY+LELP    IHNVF
Sbjct: 1137 FKINDFVFLKLQPYRQMSLKKHKAHKLLPKYYGPFKIIDKVGQVAYKLELPQDAAIHNVF 1196

Query: 423  HVSQLKRCTNPSAAVIEHPAVPSVITS--KGEPESILARKMVKRGHRAATKVLVKWK 259
            HVSQLK+C NPSA     P +P+ IT      PE IL RKMVKRG +AATKVLV+WK
Sbjct: 1197 HVSQLKKCHNPSANTT--PLIPTFITDIPTRIPELILDRKMVKRGSQAATKVLVQWK 1251


>dbj|GAU25035.1| hypothetical protein TSUD_155090 [Trifolium subterraneum]
          Length = 1326

 Score = 1564 bits (4050), Expect = 0.0
 Identities = 739/1141 (64%), Positives = 925/1141 (81%), Gaps = 4/1141 (0%)
 Frame = -3

Query: 3690 LKHRRVQMMMMEMEGD--DTQEEATSXXXXXXXXXXXXXXXXXQMSLQALTGVPSYQTMR 3517
            LKHRR Q+M+ME++ D  D  E   +                 Q+SLQALTG+ +YQTMR
Sbjct: 186  LKHRRTQLMIMELDNDHDDDVELIQNPEHSQSATDNIANFENPQLSLQALTGISTYQTMR 245

Query: 3516 VRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCKLEKVKPMKVTGGGGNKLIAPYICKEF 3337
            + GL+ KK++QILLDSGSTHNFLDL  A +LGC LE++ P+ +TGGGG+ L A +I + F
Sbjct: 246  ISGLHDKKVIQILLDSGSTHNFLDLEVAKKLGCVLEEIPPLPITGGGGHMLQAAFISRGF 305

Query: 3336 TWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLGPILWDFDKLLMEFSVQGSRVQLRGTK 3157
             W++   +F+AD+IVLPLVCCDLILGIQWLKSLGPILWDF+KL MEFS QG R  LRG+K
Sbjct: 306  QWTLQQTKFTADVIVLPLVCCDLILGIQWLKSLGPILWDFEKLQMEFSTQGRRFVLRGSK 365

Query: 3156 TPSVKLISNEAMNAAVEQGAELCFLQVNDTTPQFIIPSCSVSQSGTLQSQLPVEIELLLE 2977
            TP+VKLI+N++ + AV++GAELCF+ +++ +  F +PSC +  + +   ++P  I LL+ 
Sbjct: 366  TPNVKLINNKSFSQAVKKGAELCFMSLSNNSFSFTLPSCQLLHTQSEPKKVPEPISLLIH 425

Query: 2976 QYADIFNEPSELPPSRAGFDHKIPLKDDTMPVNIRPYRYSIIQKNIVDKLVNEMLTQGII 2797
             +ADIF EP +LPP+R GFDHKIPLK+ T P N+RPYRY+ +QK I+DKL++EM+ QG+I
Sbjct: 426  SFADIFEEPKKLPPTRIGFDHKIPLKEGTEPFNLRPYRYASMQKTIIDKLIDEMMIQGVI 485

Query: 2796 QYSNSPFASPTVLVRKKDGSWRLCVDYRRLNHSTIKDRFPIPLIEDLMDELGGASVFSKL 2617
            ++S SP+ASPTVLVRKKDGSWRLCVD+R+LN  TIKDRFPIPLIEDLMDELGGAS+FSKL
Sbjct: 486  RHSTSPYASPTVLVRKKDGSWRLCVDFRKLNSLTIKDRFPIPLIEDLMDELGGASIFSKL 545

Query: 2616 DLRSGYHQLRMAEGEEYKTAFKTHSGHYEYLVMPFGLTNAPASFQSLMNHLFQEYLRKFV 2437
            D++SGYHQLRMA GEE KTAFKTHSGH+EYLVMPFGLTNAPASFQ+LMNH+F+ +LRKFV
Sbjct: 546  DMKSGYHQLRMATGEEPKTAFKTHSGHFEYLVMPFGLTNAPASFQALMNHIFKPFLRKFV 605

Query: 2436 IIFFDDILVYSASLQDHSKHLSQVFDVARHHKLFLNKKKCHFATDRVEYLGHFITQAGVS 2257
            I+FFDDILVYS SL DH  HL  +F   R   LFLNK KCHF T++VEYLGHFIT+ GVS
Sbjct: 606  IVFFDDILVYSQSLSDHITHLELIFRTIREQNLFLNKAKCHFTTNKVEYLGHFITKEGVS 665

Query: 2256 TDPVKIQAVNNWPVPKNIKQLRGFLGLAGYYRRFVKDFGKVAKPLTDLLKKDAFLWSDST 2077
            TDP KI AV+ W +P N+KQLRGFLGLAGYYRRFVK+FGK+A+PLTD+LK+D F W+DS+
Sbjct: 666  TDPSKISAVSEWHLPTNLKQLRGFLGLAGYYRRFVKNFGKIAQPLTDMLKRDNFHWNDSS 725

Query: 2076 QTAFQLLKNALVTAPVLILPDFGKTFILETDASGKGIGAVLMQENHPIAYISKALGFKQQ 1897
            + AF+ LK AL +APVL LPDF K F++ETDASG GIGAVLMQE HPIAYISK+LG K +
Sbjct: 726  KFAFETLKQALASAPVLALPDFTKKFVVETDASGTGIGAVLMQEKHPIAYISKSLGPKHR 785

Query: 1896 ALSIYEKELLAIVYAIQKWSTYLAHRPFIIRTDQKSIKYMLEQRLNTPFQQAWMAKLMGF 1717
            A+S+YE+ELLAI+YA+QKW  YL+H PFII+TDQKSIK++L+Q+LNTPFQQ W++KLMGF
Sbjct: 786  AMSVYERELLAIIYAVQKWGAYLSHAPFIIKTDQKSIKHILDQKLNTPFQQTWVSKLMGF 845

Query: 1716 EFEIQYKEGKENKAADALSRVEGAEMMTLVLNNVSNDLLKQIQLSWNQDAAIQKLIGEIT 1537
            EFEIQYKEG  N AADALSR  GA+++ L+L+N   DLL  I+ SW+ D  + +LI E+ 
Sbjct: 846  EFEIQYKEGSTNTAADALSRKTGADLLALLLDNAQTDLLHNIKQSWSSDPTLSQLISELQ 905

Query: 1536 TNPLSHSKYSWKNNLLRRNGKLVVGSDTAVKSTLLQWLHDSAAGGHSGRDNTLARLKSLF 1357
              P +H K+SW N  LRR GKLV+G+ + +K  + QWLH+SA GGHSGRD T AR++SLF
Sbjct: 906  VKPSAHPKFSWINGELRRRGKLVIGNVSDLKDAIHQWLHNSAIGGHSGRDITTARVQSLF 965

Query: 1356 YWKGMTKDVHTYVRECVVCQRSKPEQIPSPGLLQPLPIPGRIWDSISLDFIEGLPQSKGK 1177
            +WKGM KD+ T++R C  CQ  K +   SPGLLQPLPIP +IW+ IS+DFIEGLP S GK
Sbjct: 966  FWKGMRKDIQTFIRNCSTCQTCKSDYAASPGLLQPLPIPSQIWEDISMDFIEGLPPSAGK 1025

Query: 1176 QVILVVVDRLSKYAHFLALHHPYTALEVAQTFLDSVFKLHGLPSSFISDRDPIFLSEFWS 997
            Q I VV+DRL KYAHF+ L HPYTAL+VAQ FLD +FKLHG+PS+  SDRDPIFLS+FW+
Sbjct: 1026 QTIFVVIDRLGKYAHFIPLGHPYTALDVAQAFLDHIFKLHGMPSTITSDRDPIFLSQFWT 1085

Query: 996  ELFSLQGVSLNKSTAYHPQSDGQSEIVNKALETYLRCMTSEQPQDWIKWLPLAEFWYNTT 817
            E F LQG  LN+STAYHPQ+DGQ+EIVNKALETYLRC++SE+P+DWIKWL +AE+WYNT+
Sbjct: 1086 EFFKLQGTVLNRSTAYHPQTDGQTEIVNKALETYLRCVSSEKPKDWIKWLSMAEWWYNTS 1145

Query: 816  FHSSIKTTPFEVVYGQPPPVHLPYLPGESNNSAVDRTLTAREDAIKLLRFHLLRAQNRMA 637
            +HS+ +TTPFE+VYGQPPP+HLPYLPGES++  VDRTL AREDAI L++FHL+RAQNRM 
Sbjct: 1146 YHSATQTTPFEIVYGQPPPLHLPYLPGESSSPTVDRTLNAREDAINLMKFHLMRAQNRMK 1205

Query: 636  QQANKHRTDRVFAIGDYVFLKLQPYRQFTLRNQAFHKLNPKFFGPYRVTDRIGSVAYQLE 457
            QQA+  R+DRVF IG++VFLKLQPYRQ ++R +A+HKL PK+FGP+++ D++G+VAYQLE
Sbjct: 1206 QQADLRRSDRVFDIGEFVFLKLQPYRQSSVRREAYHKLLPKYFGPFKILDKVGNVAYQLE 1265

Query: 456  LPSTTKIHNVFHVSQLKRCTNPSAAVIE--HPAVPSVITSKGEPESILARKMVKRGHRAA 283
            LP    +HNVFHVSQLK+C NPS+ + +      P+V+ +   PE+IL RKMVKRG  AA
Sbjct: 1266 LPQHAAVHNVFHVSQLKKCYNPSSTMFQPITSIWPNVVAANRYPEAILDRKMVKRGRIAA 1325

Query: 282  T 280
            T
Sbjct: 1326 T 1326



 Score =  114 bits (285), Expect = 1e-21
 Identities = 56/110 (50%), Positives = 72/110 (65%)
 Frame = -3

Query: 4248 VRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQVKHTSS 4069
            VRLASIHL+GLALQWHLNYMR +FD YP W +YV DV  RFGD +EDPL+ L+Q+KH+ +
Sbjct: 112  VRLASIHLDGLALQWHLNYMRQKFDIYPTWQQYVTDVMARFGDAFEDPLSALLQIKHSRT 171

Query: 4068 VQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAA 3919
            +Q +ID FELA TQ   L      + +  LD      V +      +Q+A
Sbjct: 172  IQEYIDAFELALTQ---LKHRRTQLMIMELDNDHDDDVELIQNPEHSQSA 218


>ref|XP_022547700.1| uncharacterized protein LOC111200699 [Brassica napus]
          Length = 2724

 Score = 1548 bits (4009), Expect = 0.0
 Identities = 750/1380 (54%), Positives = 980/1380 (71%), Gaps = 23/1380 (1%)
 Frame = -3

Query: 4260 PEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQVK 4081
            PE +VRLA++HL G ALQWH N+M  RF  +P W +YV  +  RF  L++DPLA+L+ + 
Sbjct: 1346 PELKVRLAAMHLRGKALQWHRNFMAERFGVFPSWTDYVIALSSRFNALFDDPLADLVALH 1405

Query: 4080 HTS-SVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
              S S+ T++D FE A+T++++   HALSIFL N++P    HVR F  T+++ AA +A L
Sbjct: 1406 QGSDSIITYLDKFENARTRLTLPEAHALSIFLTNMNPHLFLHVRQFGVTTVSAAAQIACL 1465

Query: 3903 HESTKITHQKPTQYKPPFTKTN--------QTVTTKEPSPTQKPIFTKTNKTMTPA---- 3760
            HE T +TH      + PF  +         Q  T   P+P  KP F   N    P     
Sbjct: 1466 HE-TALTHTPNRYQRAPFNPSTNKNPPFKPQNTTPILPTPPNKPTFIPKNTNDKPTRKYS 1524

Query: 3759 --EMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQ--EEATSXXXXXXXXX 3592
              EM ERRAKGLCMFCDE FTPGH +KH+R Q+ +M+ + DD +  +   +         
Sbjct: 1525 YQEMQERRAKGLCMFCDEAFTPGHQIKHKRSQIFVMDGDDDDAESVDVDDAEIFPDQTLE 1584

Query: 3591 XXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCKL 3412
                     +S+ AL+G  ++  MRV G Y K+ L IL+D GSTHNFLD+  A +LGC+L
Sbjct: 1585 ENTSEPTPTISVNALSGSTTFNCMRVVGQYGKRKLFILIDPGSTHNFLDIKVANELGCRL 1644

Query: 3411 EKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLGP 3232
            E V PM V    GN L+  + C  FTW++ N+ F++++  LPL CC+L+LG+QWL +LGP
Sbjct: 1645 EAVNPMSVAAANGNNLVTNFKCSNFTWTVQNYTFTSEIRTLPLDCCELVLGVQWLSTLGP 1704

Query: 3231 ILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDTTPQFI 3052
            ILWDF  L MEF+  G +  LRG   P  KLI   ++N  + Q  ++  LQV +   +  
Sbjct: 1705 ILWDFLNLSMEFTFNGLQHHLRGVTKPGCKLIKGASLNKLMLQQPQIALLQVRERAAESS 1764

Query: 3051 IPS-----CSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTM 2887
              S     C +S   +  S+ P  +  LLE ++D+F+EP+ LPP R GFDH+IPL+  + 
Sbjct: 1765 PLSPESLYCHISAPQSEFSKDPA-LTQLLESFSDVFSEPTALPPFREGFDHQIPLQSGSN 1823

Query: 2886 PVNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRL 2707
             VN+RPYRYS +QK+ +D+++ EML QGIIQ S+SP+ASP VLV+KKDGSWRLCVDYR L
Sbjct: 1824 LVNLRPYRYSSLQKDAIDEMLKEMLQQGIIQCSSSPYASPIVLVKKKDGSWRLCVDYRGL 1883

Query: 2706 NHSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEY 2527
            N+ T+KD++PIPL+EDL+DELGGA  F+KLDL +G+HQLRM+  + YKTAFK+H+GHYEY
Sbjct: 1884 NNQTVKDKYPIPLLEDLLDELGGAKYFTKLDLCAGFHQLRMSPSDVYKTAFKSHAGHYEY 1943

Query: 2526 LVMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARH 2347
            LVMPFGL+NAP +FQSLMNH+FQ+  RKF+++FFDDILVYS   + H +HL +VF + RH
Sbjct: 1944 LVMPFGLSNAPCTFQSLMNHVFQDISRKFLLVFFDDILVYSPDWESHLQHLQEVFSILRH 2003

Query: 2346 HKLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGY 2167
             +L+L   KC F    +EYLGHFI+  GV TDP KI A+  WP P ++KQLR FLGLA Y
Sbjct: 2004 QQLYLKASKCTFGATEIEYLGHFISAEGVRTDPSKIAAIKQWPTPTSVKQLRSFLGLANY 2063

Query: 2166 YRRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILET 1987
            YRRF++ +  +++PLT LL+KD FLW+    TA   LK+AL ++PVL LPDF KTF++ET
Sbjct: 2064 YRRFIRGYSVLSRPLTTLLQKDGFLWNSEADTALDNLKSALSSSPVLALPDFDKTFVVET 2123

Query: 1986 DASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFII 1807
            DAS  GIGAVLMQ+NHPI +IS+ALG + QALS+YEKEL+A+V+A+Q WS YLAHR FII
Sbjct: 2124 DASNTGIGAVLMQDNHPICFISRALGPRNQALSVYEKELMAVVHAVQAWSAYLAHRRFII 2183

Query: 1806 RTDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLV 1627
            +TDQKS+KYM+EQ+  TPFQ  W++KLMG++FEIQYK GKEN AADALSRV G++++ + 
Sbjct: 2184 KTDQKSLKYMVEQKATTPFQHMWLSKLMGYDFEIQYKLGKENVAADALSRVSGSQLLHMT 2243

Query: 1626 LNNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAV 1447
            L+         ++L W  D  ++K+I E+  +P SH  Y++ N  LRR GKLVVG+D  +
Sbjct: 2244 LSQAHQGFYDSLRLLWQSDPKLRKIISELQADPKSHPSYTFINEELRRKGKLVVGNDVNI 2303

Query: 1446 KSTLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSP 1267
            K+ + +WLHDSA GGHSGRD TL R+KSLF+W  M+ +V  YVR C VCQ++K E +  P
Sbjct: 2304 KTHIFRWLHDSAIGGHSGRDATLHRIKSLFFWSKMSLEVQNYVRNCDVCQKNKYENVAKP 2363

Query: 1266 GLLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQ 1087
            GLL PLPIP  +W+S+SLDFIEGLPQS GK  ILVV+DRLSK AHFLAL HPYTA+EVAQ
Sbjct: 2364 GLLNPLPIPNGVWESVSLDFIEGLPQSAGKHCILVVIDRLSKQAHFLALSHPYTAIEVAQ 2423

Query: 1086 TFLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKA 907
             +LD+VFKLHGLP   ISDRDP FLS+ W ELF + GV L+ STAYHPQ+DGQ+E+ NK 
Sbjct: 2424 AYLDNVFKLHGLPKDIISDRDPTFLSDVWKELFRVHGVDLSYSTAYHPQTDGQTEVTNKT 2483

Query: 906  LETYLRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGESN 727
            LETYLRCMT+E PQ W KWLPLAE+WYNTT+HS+I++TPF +VYGQPPP HLPYLPGES 
Sbjct: 2484 LETYLRCMTAETPQTWSKWLPLAEWWYNTTYHSAIRSTPFGIVYGQPPPTHLPYLPGESK 2543

Query: 726  NSAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFTL 547
            ++ VDR+L  RE+ I +L+FHLLRAQNR  Q A+ HR+ R F +G YV+LKLQPYRQ +L
Sbjct: 2544 SALVDRSLQKREEVISMLKFHLLRAQNRNKQAADSHRSPRSFTVGSYVYLKLQPYRQNSL 2603

Query: 546  RNQAF-HKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIEH 370
            +N+   HKL+P+++GP+RV D +GS AY+L+LP+   IHNVFHVSQLK C NP AA    
Sbjct: 2604 KNRKVPHKLSPRYYGPFRVLDTVGSAAYRLDLPAGAAIHNVFHVSQLKLCPNPQAASSGL 2663

Query: 369  PAVPSVITSKGEPESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAFH 190
            P     + +  EPE IL  KM KR + A TKVLV+WK   PE ATWE+Y   +  +P FH
Sbjct: 2664 PQFYVDLGTSKEPEQILETKMAKRRNAAVTKVLVQWKGETPEQATWEFYKYFIAKHPQFH 2723



 Score = 1303 bits (3371), Expect = 0.0
 Identities = 630/1169 (53%), Positives = 826/1169 (70%), Gaps = 22/1169 (1%)
 Frame = -3

Query: 4260 PEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQVK 4081
            PE +VRLA++HL G ALQWH N+M  RF  +P W +YV  +  RF  L++DPLA+L+ + 
Sbjct: 142  PELKVRLAAMHLRGKALQWHRNFMAERFGVFPSWTDYVIALSSRFNALFDDPLADLVALH 201

Query: 4080 HTS-SVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
              S S+ T++D FE A+T++++   HALSIFL N++P    HVR F  T+++ AA +A L
Sbjct: 202  QGSDSIITYLDKFENARTRLTLPEAHALSIFLTNMNPHLFLHVRQFGVTTVSAAAQIACL 261

Query: 3903 HESTKITHQKPTQYKPPFTKTN--------QTVTTKEPSPTQKPIFTKTNKTMTPA---- 3760
            HE T + H      + PF  +         Q  T   P+P  KP F   N    P     
Sbjct: 262  HE-TALAHTPNRYQRAPFNPSTNKNPPFKPQNTTPILPTPPNKPTFIPKNTNDKPTRKYS 320

Query: 3759 --EMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQ--EEATSXXXXXXXXX 3592
              EM ERRAKGLCMFCDE FTPGH +KH+R Q+ +M+ + DD +  +   +         
Sbjct: 321  YQEMQERRAKGLCMFCDEAFTPGHQIKHKRSQIFVMDGDDDDAESVDVDDAEIFPDQTLE 380

Query: 3591 XXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCKL 3412
                     +S+ AL+G  ++  MRV G Y K+ L IL+D GSTHNFLD+  A +LGC+L
Sbjct: 381  ENTSEPTPTISVNALSGSTTFNCMRVVGQYGKRKLFILIDPGSTHNFLDIKVANELGCRL 440

Query: 3411 EKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLGP 3232
            E V PM V    GN L+  + C  FTW++ N+ F++++  LPL CC+L+LG+QWL +LGP
Sbjct: 441  EAVNPMSVAAANGNNLVTNFKCSNFTWTVQNYTFTSEIRTLPLDCCELVLGVQWLSTLGP 500

Query: 3231 ILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDTTPQFI 3052
            ILWDF  L MEF+  G +  LRG   P  KLI   ++N  + Q  ++  LQV +   +  
Sbjct: 501  ILWDFLNLSMEFTFNGLQHHLRGVTKPGCKLIKGASLNKLMLQQPQIALLQVRERAAESS 560

Query: 3051 IPS-----CSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTM 2887
              S     C +S   +  S+ P  +  LLE ++D+F+EP+ LPP R GFDH+IPL+  + 
Sbjct: 561  PLSPESLYCHISAPQSEFSKDPA-LTQLLESFSDVFSEPTALPPFREGFDHQIPLQSGSN 619

Query: 2886 PVNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRL 2707
            PVN+RPYRYS +QK+ +D+++ EML QGIIQ S+SP+ASP VLV+KKDGSWRLCVDYR L
Sbjct: 620  PVNLRPYRYSSLQKDAIDEMLKEMLQQGIIQCSSSPYASPIVLVKKKDGSWRLCVDYRGL 679

Query: 2706 NHSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEY 2527
            N+ T+KD++PIPL+EDL+DELGGA  F+KLDL +G+HQLRM+  + YKTAFK+H+GHYEY
Sbjct: 680  NNQTVKDKYPIPLLEDLLDELGGAKYFTKLDLCAGFHQLRMSPSDVYKTAFKSHAGHYEY 739

Query: 2526 LVMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARH 2347
            LVMPFGL+NAP +FQSLMNH+FQ+  RKF+++FFDDILVYS   + H +HL +VF + RH
Sbjct: 740  LVMPFGLSNAPCTFQSLMNHVFQDISRKFLLVFFDDILVYSPDWESHLQHLQEVFSILRH 799

Query: 2346 HKLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGY 2167
             +L+L   KC F    +EYLGHFI+  GV TDP KI A+  WP P ++KQLR FLGLA Y
Sbjct: 800  QQLYLKASKCTFGATEIEYLGHFISAEGVRTDPSKIAAIKQWPTPTSVKQLRSFLGLANY 859

Query: 2166 YRRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILET 1987
            YRRF++ +  +++PLT LL+KD FLW+    TA   LK+AL ++PVL LPDF KTF++ET
Sbjct: 860  YRRFIRGYSVLSRPLTTLLQKDGFLWNSEADTALDNLKSALSSSPVLALPDFDKTFVVET 919

Query: 1986 DASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFII 1807
            DAS  GIGAVLMQ+NHPI +IS+ALG + QALS+YEKEL+A+V+A+Q WS YLAHR FII
Sbjct: 920  DASNTGIGAVLMQDNHPICFISRALGPRNQALSVYEKELMAVVHAVQAWSAYLAHRRFII 979

Query: 1806 RTDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLV 1627
            +TDQKS+KYM+EQ+  TPFQ  W++KLMG++FEIQYK GKEN AADALSRV G++++ + 
Sbjct: 980  KTDQKSLKYMVEQKATTPFQHMWLSKLMGYDFEIQYKLGKENVAADALSRVSGSQLLHMT 1039

Query: 1626 LNNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAV 1447
            L+         ++L W  D  ++K+I E+  +P SH  Y++ N  LRR GKLVVG++  +
Sbjct: 1040 LSQAHQGFYDSLRLLWQSDPKLRKIISELQADPKSHPSYTFINEELRRKGKLVVGNNVNI 1099

Query: 1446 KSTLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSP 1267
            K+ + +WLHDSA GGHSGRD TL R+KSLF+W  M+ +V  YVR C VCQ++K E +  P
Sbjct: 1100 KTHIFRWLHDSAIGGHSGRDATLHRIKSLFFWSKMSLEVQNYVRNCDVCQKNKYENVAKP 1159

Query: 1266 GLLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQ 1087
            GLL PLPIP  +W+S+SLDFIEGLPQS GK  ILVV+DRLSK AHFLAL HPYTA+EVAQ
Sbjct: 1160 GLLNPLPIPNGVWESVSLDFIEGLPQSAGKHCILVVIDRLSKQAHFLALSHPYTAIEVAQ 1219

Query: 1086 TFLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKA 907
             +LD+VFKLHGLP   ISDRDP FLS+ W ELF + GV L  STAYHPQ+DGQ+E+ NK 
Sbjct: 1220 AYLDNVFKLHGLPKDIISDRDPTFLSDVWKELFRVHGVDLRYSTAYHPQTDGQTEVTNKT 1279

Query: 906  LETYLRCMTSEQPQDWIKWLPLAEFWYNT 820
            LETYLRCMT+E PQ W KWLPLAE+WYNT
Sbjct: 1280 LETYLRCMTAETPQTWSKWLPLAEWWYNT 1308


>dbj|GAU39660.1| hypothetical protein TSUD_60270 [Trifolium subterraneum]
          Length = 1128

 Score = 1516 bits (3926), Expect = 0.0
 Identities = 737/1159 (63%), Positives = 887/1159 (76%)
 Frame = -3

Query: 3666 MMMEMEGDDTQEEATSXXXXXXXXXXXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLL 3487
            M+ME+  DD+     +                 Q+SLQALTGVP+YQTMRV G++ KK L
Sbjct: 1    MVMELAEDDSTLLDETSIPPPTEPEITNPFANPQLSLQALTGVPAYQTMRVTGMHNKKTL 60

Query: 3486 QILLDSGSTHNFLDLNKAIQLGCKLEKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFS 3307
             ILLDSGSTHNFLDL  A +LGC LE + P+ VTGGGG+KL A ++CK F W +  H F+
Sbjct: 61   HILLDSGSTHNFLDLEVAKKLGCHLEAIPPLAVTGGGGHKLEAAFMCKGFKWQLQQHVFT 120

Query: 3306 ADMIVLPLVCCDLILGIQWLKSLGPILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNE 3127
            AD+IVLPLVCCDLILGIQWLKSLGPILWDF+ L MEF   G +  LRG K PS+KLI+N+
Sbjct: 121  ADVIVLPLVCCDLILGIQWLKSLGPILWDFEHLQMEFRTNGRKFVLRGAKIPSIKLINNK 180

Query: 3126 AMNAAVEQGAELCFLQVNDTTPQFIIPSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPS 2947
            +   AV++GAE+C L + +      +P+C +    +    +P  I  LL +Y DIF EPS
Sbjct: 181  SFAQAVQEGAEMCLLTLENDMSNLSLPTCFLLSVDSAPMVVPNLISRLLSEYDDIFVEPS 240

Query: 2946 ELPPSRAGFDHKIPLKDDTMPVNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASP 2767
            +LPP R GFDHKIPLKD   P N+RPYRYS++QK I+D LV EML QGIIQ+SNSPF+SP
Sbjct: 241  QLPPHRPGFDHKIPLKDGCEPFNLRPYRYSLVQKTIIDNLVTEMLDQGIIQHSNSPFSSP 300

Query: 2766 TVLVRKKDGSWRLCVDYRRLNHSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLR 2587
            TVLVRKKDGSWRLCVD+RRLN ST+KDRFPIPLIEDL+DEL GAS+FSKLDLRSGYHQLR
Sbjct: 301  TVLVRKKDGSWRLCVDFRRLNQSTVKDRFPIPLIEDLLDELSGASIFSKLDLRSGYHQLR 360

Query: 2586 MAEGEEYKTAFKTHSGHYEYLVMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVY 2407
            +A GEE KTAFKTHSGHYEYLVMPFG TNAPASFQ+LMNH+F+ +LRKFVIIFFDD+L+Y
Sbjct: 361  IATGEELKTAFKTHSGHYEYLVMPFGFTNAPASFQALMNHIFKPFLRKFVIIFFDDLLIY 420

Query: 2406 SASLQDHSKHLSQVFDVARHHKLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVN 2227
            S  L +H  HL  +FD  R++ LFLN+ KC FAT +VEYLGHFIT  GVSTDP K+QAV+
Sbjct: 421  SRCLDEHENHLRLIFDTVRNNNLFLNQNKCCFATSKVEYLGHFITAEGVSTDPAKLQAVS 480

Query: 2226 NWPVPKNIKQLRGFLGLAGYYRRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNA 2047
             WP+PKN+KQLRGFLGLAGYYRRFVKDFGK+AKPLTD+LKKD F+WSD +  AF+ LK A
Sbjct: 481  EWPLPKNLKQLRGFLGLAGYYRRFVKDFGKIAKPLTDMLKKDCFIWSDQSTKAFEELKQA 540

Query: 2046 LVTAPVLILPDFGKTFILETDASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELL 1867
            LV++PVL LP F K FI+ETDASGKGIGAVLMQ  HPIAYISK+LG +QQALS+YE+ELL
Sbjct: 541  LVSSPVLSLPGFTKQFIVETDASGKGIGAVLMQNCHPIAYISKSLGPRQQALSVYERELL 600

Query: 1866 AIVYAIQKWSTYLAHRPFIIRTDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGK 1687
            AIVYA+QKW  YL+H PF+I+TD +SIK+ML+Q+LNTPFQQAW+AKLMG++FEI+YKEG 
Sbjct: 601  AIVYAVQKWGAYLSHAPFVIKTDHRSIKHMLDQKLNTPFQQAWVAKLMGYDFEIRYKEGV 660

Query: 1686 ENKAADALSRVEGAEMMTLVLNNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYS 1507
             N  ADALSR EGAE+M+L+LN+ S +L   I+ +W  D  + KL  E+  NP S+ K++
Sbjct: 661  SNIEADALSRKEGAELMSLILNSQSPNLFDTIKSAWQSDPFLSKLCSELQQNPTSNPKFT 720

Query: 1506 WKNNLLRRNGKLVVGSDTAVKSTLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVH 1327
            W  N LRR GKLV+GSD  +K+ +  WLHDSA GGHSGRD T AR+KSLF+WKGM K++ 
Sbjct: 721  WIRNELRRKGKLVIGSDPTLKAAIFHWLHDSALGGHSGRDLTAARIKSLFFWKGMAKEIQ 780

Query: 1326 TYVRECVVCQRSKPEQIPSPGLLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRL 1147
            +YVR C VCQR+K +   SP L+QPLPIP +IW  IS+DFIEGLP S GKQVI VVVDRL
Sbjct: 781  SYVRNCGVCQRNKSDLSASPDLIQPLPIPDKIWTDISMDFIEGLPTSAGKQVIFVVVDRL 840

Query: 1146 SKYAHFLALHHPYTALEVAQTFLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSL 967
            SKYAHF+AL HPYTA  VA+ FLD VFKLHGLP S  SDRDPIFLS+FW+E F LQGVSL
Sbjct: 841  SKYAHFMALSHPYTAENVAKIFLDHVFKLHGLPDSITSDRDPIFLSKFWNEFFMLQGVSL 900

Query: 966  NKSTAYHPQSDGQSEIVNKALETYLRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPF 787
            NKSTAYHPQSDGQ+EIVNK+LETYLRCM  +Q + W +WL L E+WYNT FH +I TTP+
Sbjct: 901  NKSTAYHPQSDGQTEIVNKSLETYLRCMCGDQSKTWFQWLSLVEYWYNTNFHLAIHTTPY 960

Query: 786  EVVYGQPPPVHLPYLPGESNNSAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDR 607
            EVVYGQPPPV     PG                               +  QANKHR++R
Sbjct: 961  EVVYGQPPPVIYLIYPG-------------------------------LPLQANKHRSER 989

Query: 606  VFAIGDYVFLKLQPYRQFTLRNQAFHKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNV 427
             F IGD+V+LKLQPYRQF++RNQ +HKL PKF+GP++V D+IG+VAYQL+LPS+ + HNV
Sbjct: 990  QFDIGDFVYLKLQPYRQFSMRNQLYHKLLPKFYGPFKVLDKIGAVAYQLDLPSSVEKHNV 1049

Query: 426  FHVSQLKRCTNPSAAVIEHPAVPSVITSKGEPESILARKMVKRGHRAATKVLVKWKNLAP 247
            FHVSQLK+C NP+    + P   +       P  IL RKMV+RG   ATKVLV+WK+  P
Sbjct: 1050 FHVSQLKKCPNPTTVAFQ-PVPTTAFQVDRIPLLILDRKMVRRGRVEATKVLVQWKDSPP 1108

Query: 246  ELATWEWYYDLLRDYPAFH 190
            E ATWE+YYDLL+ +P FH
Sbjct: 1109 EQATWEYYYDLLKRFPNFH 1127


>ref|XP_013658015.1| uncharacterized protein LOC106362703 [Brassica napus]
          Length = 1829

 Score = 1471 bits (3808), Expect = 0.0
 Identities = 726/1366 (53%), Positives = 945/1366 (69%), Gaps = 31/1366 (2%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQV 4084
            PPE +VRLAS+H+   ALQWH +Y+  R++++PLWPEYVA +  RF  L++DPL+EL+ +
Sbjct: 143  PPELKVRLASLHMTSKALQWHHSYIANRYNQFPLWPEYVAAISDRFSKLFDDPLSELVSL 202

Query: 4083 KH-TSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAK 3907
            K    ++  ++D F+ A  ++++ P HALSIFL N+      HVR F   ++ +AA +AK
Sbjct: 203  KQGNDTIDEYLDKFDCAMNRITLTPAHALSIFLTNMHQHLALHVRQFKVDTVPEAAKIAK 262

Query: 3906 LHE----STKITHQKPTQYKPP---FTKTNQTVTTKEPSPT--------QKPIFTKT-NK 3775
            LHE     T     +P+   P    F++TN+        PT         KP+   T  K
Sbjct: 263  LHELSLMHTPSRTARPSSNAPQRSNFSQTNKHQYNNSTPPTTTNLNDQNNKPLIANTPQK 322

Query: 3774 TMTPAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEATSXXXXXXXX 3595
             ++  EM ER+ KGLCMFC+EPFTPGH LKHRR + + ME E +  +E A          
Sbjct: 323  RISFEEMQERKRKGLCMFCEEPFTPGHQLKHRRAEFLFMEAETEFDEEIALEEQIRETTL 382

Query: 3594 XXXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCK 3415
                      +S+ AL G P++  MR+ G Y K+ L IL+D GSTHNFL++  A  LGC 
Sbjct: 383  VDDQDDKVPTISVHALNGCPTFNCMRLMGQYGKRKLHILIDPGSTHNFLNIQVAKGLGCS 442

Query: 3414 LEKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLG 3235
            L   KPM V    G+ LI  Y C  F+W M  + FS ++  LPL C DL+LG+QWL +LG
Sbjct: 443  LIPTKPMSVVAASGD-LITKYKCNPFSWKMQGYGFSTEIRTLPLGCSDLVLGVQWLSTLG 501

Query: 3234 PILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVN--DTT- 3064
            PILWDF  L MEF+ QG +  LRG    S K+I+  ++N  + Q  +L  L +   D+T 
Sbjct: 502  PILWDFLNLRMEFNFQGLKHVLRGVSPNSAKVINGSSLNKLMLQEPQLALLHIRELDSTL 561

Query: 3063 -------PQFIIPSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIP 2905
                   P  ++     S + T  ++    ++ LL  +ADIF EP+ LPP R GF+HKIP
Sbjct: 562  ETHQTLDPATLLYHIEASGANTDDNE---PLQQLLASFADIFEEPTSLPPYREGFNHKIP 618

Query: 2904 LKDDTMPVNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLC 2725
            L+    PV++RPYRYS +QK+ +DK++ EM+ QGIIQYS+SP+ASP VLV+KKDGSWRLC
Sbjct: 619  LEAGANPVSLRPYRYSAVQKDAIDKMIREMVDQGIIQYSSSPYASPVVLVKKKDGSWRLC 678

Query: 2724 VDYRRLNHSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTH 2545
            V YR LN  TIKD++PIPL+EDL+DELGG+  FSKLDLR+G+HQLRM+  + +KTAFKTH
Sbjct: 679  VYYRGLNKQTIKDKYPIPLLEDLLDELGGSKYFSKLDLRAGFHQLRMSPEDVHKTAFKTH 738

Query: 2544 SGHYEYLVMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQV 2365
            SGHYEYLVMPFGLTNAP +FQ LMNH+F+  LRKF+++FFDDIL+YS + +DH  HL  V
Sbjct: 739  SGHYEYLVMPFGLTNAPCTFQGLMNHVFEPILRKFLLVFFDDILIYSKTWEDHLHHLDMV 798

Query: 2364 FDVARHHKLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGF 2185
            F + RH +L+L   KC F   R+EYLGHFI+  G                    KQ+R F
Sbjct: 799  FSILRHQQLYLKMSKCTFGATRIEYLGHFISNEG--------------------KQVRSF 838

Query: 2184 LGLAGYYRRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGK 2005
            LGLA YYRRF++ +  +A+PLT LL+KD + W     TAF+LLK AL +APVL LPDF K
Sbjct: 839  LGLANYYRRFIQGYSIIARPLTILLRKDGYTWGSDESTAFKLLKEALTSAPVLALPDFSK 898

Query: 2004 TFILETDASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLA 1825
            TFI+ETDAS  GIGAVLMQ+NHPI YIS+AL  + Q LS+YEKELLA+V+A+Q WS YLA
Sbjct: 899  TFIVETDASNTGIGAVLMQDNHPICYISRALEKRHQGLSVYEKELLAVVHAVQTWSPYLA 958

Query: 1824 HRPFIIRTDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGA 1645
            H  FIIRTDQKS+K++LEQ++ TPFQ  W++KLMG+ FEIQYK+GKEN AADALSRV G+
Sbjct: 959  HNKFIIRTDQKSLKFLLEQKITTPFQNMWLSKLMGYTFEIQYKQGKENIAADALSRVSGS 1018

Query: 1644 EMMTLVLNNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVV 1465
            +++ L L+ + +    +++  W  D  +QK+I E+   P SH+ Y++ N+ LRR GKLVV
Sbjct: 1019 QLLQLTLSQIHHGFYDELKHLWTTDPTLQKIISELQIKPSSHASYTFINDELRRRGKLVV 1078

Query: 1464 GSDTAVKSTLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKP 1285
            G+D +VK  + +WLHDSA GGHSGRD+TL R+KSLFYW  MT +V  YVR C  CQR+K 
Sbjct: 1079 GNDPSVKLHIFKWLHDSAIGGHSGRDSTLHRIKSLFYWPKMTLEVQNYVRNCSTCQRNKY 1138

Query: 1284 EQIPSPGLLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYT 1105
            +Q   PG+LQPLP+P  +W+SISLDFIEGLP S GK  ILVV+DRLSK AHFLAL HPYT
Sbjct: 1139 DQAAKPGMLQPLPVPAGVWESISLDFIEGLPPSAGKHCILVVIDRLSKNAHFLALSHPYT 1198

Query: 1104 ALEVAQTFLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQS 925
            A++VA+ +L+ VF+LHG+P    SDRDP FLSE W E+F + GV+LN STAYHPQ+DGQ+
Sbjct: 1199 AMDVAKAYLNQVFRLHGMPKDITSDRDPTFLSEVWREMFRVHGVNLNYSTAYHPQTDGQT 1258

Query: 924  EIVNKALETYLRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPY 745
            E+ NK LETYLRCMTS+ P  W +WLPLAE+WYNTT+HS+I +TPFEV+YGQPPPVHLPY
Sbjct: 1259 EVTNKTLETYLRCMTSDAPHTWSEWLPLAEWWYNTTYHSAIHSTPFEVIYGQPPPVHLPY 1318

Query: 744  LPGESNNSAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQP 565
            LPGES +  V+ TL  RE+ I +++FHLLRAQNRM Q A+  R+ R F IG+YV+LKLQP
Sbjct: 1319 LPGESTSPTVNNTLQRREELIDMMKFHLLRAQNRMKQYADSRRSVREFEIGNYVYLKLQP 1378

Query: 564  YRQFTLRNQAF-HKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPS 388
            YRQ +L+ +   HKL+P+F+GP+ V DR+G +AY+L LP    IHNVFHVSQLK C NP 
Sbjct: 1379 YRQHSLKGRHLPHKLSPRFYGPFEVQDRVGPLAYKLRLPPGAAIHNVFHVSQLKLCPNPP 1438

Query: 387  AAVIEHPAVPSVITSKG---EPESILARKMVKRGHRAATKVLVKWK 259
                  P +P  +T  G   EP +IL +KMVKR +RA TK   K K
Sbjct: 1439 TTT---PTLPQYLTDIGTVKEPAAILEKKMVKRQNRAVTKQRCKEK 1481


>gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1005

 Score = 1447 bits (3745), Expect = 0.0
 Identities = 686/1006 (68%), Positives = 829/1006 (82%), Gaps = 1/1006 (0%)
 Frame = -3

Query: 3204 MEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDTTPQFIIPSCSVSQS 3025
            MEF+    +  LRG KT ++KLI+N++    V++GAEL FL V +    FI+P+C   Q+
Sbjct: 1    MEFTSHNRKFVLRGAKTQNLKLINNKSFAQVVQKGAELSFLSVTNRDDPFIMPTCHALQA 60

Query: 3024 GTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMPVNIRPYRYSIIQK 2845
                  LP   E LL QY DIF EP+ LPPSR GFDHKIPLK+   P N+RPYR+S++QK
Sbjct: 61   SDSLVALPKAFEKLLVQYDDIFEEPTTLPPSRPGFDHKIPLKEGVQPFNLRPYRFSLVQK 120

Query: 2844 NIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLNHSTIKDRFPIPLI 2665
            +++DKLV +ML QGI+Q+S SPFASPT+LVRKKDGSWRLCVD+RRLN  TIK+RFPIPLI
Sbjct: 121  DVIDKLVQDMLDQGIVQHSTSPFASPTILVRKKDGSWRLCVDFRRLNDLTIKNRFPIPLI 180

Query: 2664 EDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYLVMPFGLTNAPASF 2485
            EDLMDEL G+ +FSKLD+RSGYHQLRMA GEEYKTAFKTHSGH+EYLVMPFGLTNAPASF
Sbjct: 181  EDLMDELHGSVIFSKLDMRSGYHQLRMAHGEEYKTAFKTHSGHFEYLVMPFGLTNAPASF 240

Query: 2484 QSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHHKLFLNKKKCHFAT 2305
            QSLMN +F  +LRKFVI+FFDD+L+YS SL+DH  HL  +F   R + LFLNK KC+FA 
Sbjct: 241  QSLMNQVFSPFLRKFVIVFFDDLLIYSQSLEDHQVHLQLIFQTIRDNHLFLNKSKCNFAL 300

Query: 2304 DRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYYRRFVKDFGKVAKP 2125
             RVEYLGHFIT+ GVSTDP+KIQAV++WP+P+N+KQLRGFLGLAGYYRRFV+DFGK+AKP
Sbjct: 301  PRVEYLGHFITREGVSTDPLKIQAVSSWPIPQNLKQLRGFLGLAGYYRRFVRDFGKIAKP 360

Query: 2124 LTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETDASGKGIGAVLMQE 1945
            LTDLLKKD+F+WS     AF  LK ALV+APVL LPDF K FI+ETDASGKGIGAVLMQ 
Sbjct: 361  LTDLLKKDSFIWSAEATQAFTTLKQALVSAPVLCLPDFSKKFIVETDASGKGIGAVLMQN 420

Query: 1944 NHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFIIRTDQKSIKYMLEQR 1765
             HPIAYISK+LG KQQA+S+YE+ELLAIVYA+QKW +YL+H PFII+TDQKSIK+ML+Q+
Sbjct: 421  QHPIAYISKSLGPKQQAMSVYERELLAIVYAVQKWGSYLSHAPFIIKTDQKSIKHMLDQK 480

Query: 1764 LNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLVLNNVSNDLLKQIQL 1585
            LNTPFQQ W+AKL+GF+FEIQYKEG  N AADALSR  GAE++ L+L+N S+DL + I L
Sbjct: 481  LNTPFQQVWVAKLLGFDFEIQYKEGSSNLAADALSRKVGAELLPLILSNASDDLWESINL 540

Query: 1584 SWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAVKSTLLQWLHDSAAG 1405
            +W QD  ++ +I ++  +P SHSK+SW  + LRR GKLV+GS+  +K T+L WLH SA G
Sbjct: 541  AWQQDTHLKAIIHDLKKDPKSHSKFSWIRDELRRRGKLVIGSNPTIKETILTWLHSSAIG 600

Query: 1404 GHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSPGLLQPLPIPGRIWD 1225
            GHSGRD T +R+KSLFYWKGM KD+ T+V+ C +CQ++KP+   SPGLLQPLPIP +IW 
Sbjct: 601  GHSGRDVTTSRVKSLFYWKGMNKDIITFVKNCAICQKNKPDLAASPGLLQPLPIPNQIWT 660

Query: 1224 SISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQTFLDSVFKLHGLPS 1045
             IS+DF+EGLP S GKQVI VVVDRLSKYAHF+AL HPYTA +VAQ FLD+VFKLHGLP 
Sbjct: 661  HISMDFVEGLPTSVGKQVIFVVVDRLSKYAHFMALSHPYTASDVAQLFLDNVFKLHGLPE 720

Query: 1044 SFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKALETYLRCMTSEQPQ 865
            S ISDRDPIF+S FW++ F LQGV+LNKS+AYHPQSDGQ+E+VNK LETYLRCM S++P 
Sbjct: 721  SIISDRDPIFISSFWNDFFKLQGVALNKSSAYHPQSDGQTEVVNKCLETYLRCMCSDRPT 780

Query: 864  DWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGESNNSAVDRTLTAREDA 685
             W KWL LAE+WYN+ +HSSI TTPFEVVYGQPPP+HLPYLPG S  ++VDR+L ARE+A
Sbjct: 781  QWFKWLSLAEWWYNSNYHSSIHTTPFEVVYGQPPPIHLPYLPGSSATASVDRSLIAREEA 840

Query: 684  IKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFTLRNQAFHKLNPKFFG 505
            IKLL+FHLLRAQNRM QQANKHR+DRVFAIGDYV+LKLQPYRQ ++++  FHKL PKF+G
Sbjct: 841  IKLLKFHLLRAQNRMTQQANKHRSDRVFAIGDYVYLKLQPYRQLSMKSHGFHKLLPKFYG 900

Query: 504  PYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIEHPAVPSVITSKGE-PE 328
            P+ V DRIGS AYQLELP +  IHNVFHVSQLK C NP    I+H  +P+ ++ +   P 
Sbjct: 901  PFPVLDRIGSTAYQLELPPSAAIHNVFHVSQLKLCPNPQGMPIQH--IPASLSHETRIPI 958

Query: 327  SILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAFH 190
            +IL RKMVKRG+RAATKVLV+WK+L  + ATWE+YYDLL+ +P FH
Sbjct: 959  AILDRKMVKRGNRAATKVLVQWKDLPMDKATWEFYYDLLKKFPNFH 1004


>gb|KYP38605.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
          Length = 1390

 Score = 1417 bits (3667), Expect = 0.0
 Identities = 703/1390 (50%), Positives = 955/1390 (68%), Gaps = 32/1390 (2%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQV 4084
            P + +VRLA +HLEG ALQWH    +   ++ P W EY+  ++ RFGD+ +DP+AEL+++
Sbjct: 14   PEDVKVRLAIVHLEGKALQWHTAISKNLVNQQPSWEEYMKMLQDRFGDICDDPMAELMKL 73

Query: 4083 KHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLAKL 3904
            +    V  + + F+   +++ +  E+ LS FL  L  + Q  VRMF P S+ +A +LAK+
Sbjct: 74   RQEKGVSEYHEAFDAIISRLDLTEEYRLSCFLGGLKHEIQMMVRMFRPDSVRRAFSLAKM 133

Query: 3903 HESTKITHQKPTQYKPPF--TKTNQTVTTKEP---SPTQKPIF---------TKTNKTMT 3766
            +++++         KP    ++ N+ V    P   +PT +  +         TK  + +T
Sbjct: 134  YKASQPQGPLAMASKPLSLNSRNNKNVMNSRPLLPTPTDQAKYNQPEFTSNKTKPYRNLT 193

Query: 3765 PAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEME---GDDTQEEATSXXXXXXXX 3595
            P  M++RR+KGLC FCDEP++  H L H+++Q+ ++E+E    D T EE           
Sbjct: 194  PTYMADRRSKGLCYFCDEPYSQAHSLTHKKLQLHVIEVEETSNDPTFEEELPDSDSADMG 253

Query: 3594 XXXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCK 3415
                      +S+ ALT +P+++TMR+ G Y KK L IL+DSGSTHNFLD++ A +LGC+
Sbjct: 254  EPQ-------ISVHALTDIPNFKTMRITGYYNKKPLHILIDSGSTHNFLDVHIAKKLGCR 306

Query: 3414 LEKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLG 3235
            ++ ++PM VT    +KL    + K+F W++    F++DM++L L CCDL+LGI+WL +LG
Sbjct: 307  IDNLEPMHVTVADDSKLNIEAMVKDFKWTIQQTMFTSDMMLLSLGCCDLVLGIEWLITLG 366

Query: 3234 PILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDTTPQF 3055
             I W FDKL M+F  QG +  LR  +   +K +  +     +++G  +  +Q+ +     
Sbjct: 367  DITWKFDKLSMQFYAQGRKHVLRSAQLQGMKTVRRKQFGRILKEGVHISMIQLCNQEGAL 426

Query: 3054 IIPSCSVSQSGTLQSQLPV---EIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMP 2884
            +        + T   QLPV   +I+ +L ++ D+F EP++LPP R+  DHKIPL   + P
Sbjct: 427  L-------HTLTTHGQLPVPTPKIQYILGEFEDVFQEPTQLPPVRSDHDHKIPLVQGSNP 479

Query: 2883 VNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLN 2704
            VN RPYRY+  QK+++DKLV E L  GIIQ SNSP+ASP VLV KKDGSWRLCVDYR LN
Sbjct: 480  VNKRPYRYAKQQKDVIDKLVKEYLNTGIIQASNSPYASPVVLVGKKDGSWRLCVDYRELN 539

Query: 2703 HSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYL 2524
             +T+KD+FPIPL+EDL+DEL G++++SK+DLRSGY+Q+RM   + +KTAFKTH GHYEYL
Sbjct: 540  KATVKDKFPIPLVEDLLDELHGSTIYSKIDLRSGYNQVRMHPMDVHKTAFKTHGGHYEYL 599

Query: 2523 VMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHH 2344
            VMPFGLTNAPA+FQ LMN +FQEYLR+F+++FFDDIL+YS S++DH +HL  V    R +
Sbjct: 600  VMPFGLTNAPATFQGLMNSVFQEYLRQFLLVFFDDILIYSKSIEDHMQHLQLVLQTMRQN 659

Query: 2343 KLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYY 2164
             LF  K KC+FA  +VEYLGHFI    VSTDP KI+AV NWP+P+ +KQLRGFLGLAGYY
Sbjct: 660  NLFARKSKCYFAVTKVEYLGHFINAEAVSTDPSKIEAVKNWPLPETLKQLRGFLGLAGYY 719

Query: 2163 RRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETD 1984
            +RFV+ +G +AKPLT+LLKKD F W+   + AFQ  K+ L+ APVL LPDF   F+LE D
Sbjct: 720  KRFVRGYGGIAKPLTELLKKDNFTWTVEAKQAFQKSKSLLIQAPVLALPDFNMQFVLEVD 779

Query: 1983 ASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFIIR 1804
            A G GIGAVLMQ +HPIA+IS+AL  +Q ALS YEKELLA+V+A+QKW  YL ++ FII+
Sbjct: 780  ACGYGIGAVLMQAHHPIAFISRALSSQQHALSTYEKELLAVVFAVQKWRHYLLNKQFIIK 839

Query: 1803 TDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLVL 1624
            TD +S+KY+L+QRL T FQQ W+ KLM F+F I+YKEGK N A DALSR E     ++ +
Sbjct: 840  TDHRSLKYILDQRLTTSFQQKWLIKLMEFDFIIEYKEGKTNIAGDALSRKEDPTCCSVNI 899

Query: 1623 NNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAVK 1444
            + VS DLL +IQ SW  D +++K+I ++ TNP SH  Y+W+N  LRR G+LV+G++  ++
Sbjct: 900  HTVSTDLLDKIQASWRTDLSLKKIINDVKTNPDSHRHYTWRNEELRRKGRLVIGNNGDLR 959

Query: 1443 STLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSPG 1264
            + +L WLH S+  GHSG + T+ R KS+ YWKG+T+D+  ++R+C  CQR K E I S G
Sbjct: 960  TQILNWLHSSSIAGHSGINATIQRAKSVIYWKGLTRDITEFIRKCATCQRCKYETIASLG 1019

Query: 1263 LLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQT 1084
            +LQPLPIP  IW  I++DFIEGLP S GKQVI VVVDRLSK AHF+ L HPY A +VAQ 
Sbjct: 1020 ILQPLPIPDHIWQHINMDFIEGLPSSAGKQVIFVVVDRLSKAAHFIGLSHPYQASDVAQA 1079

Query: 1083 FLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKAL 904
            FLD++FKLHG P +  SDRDPIF+S FW E   LQGV    S+AYHPQ+DGQSE+VN+ L
Sbjct: 1080 FLDNIFKLHGFPETITSDRDPIFISNFWQEFMQLQGVETRLSSAYHPQTDGQSEVVNRCL 1139

Query: 903  ETYLRCMTSEQPQDW----IKWLPLAEFWYNTTFHS--------SIKTTPFEVVYGQPPP 760
            ETYLRCM S+ P +W     K L        T            SIK TP+EVVYG+PPP
Sbjct: 1140 ETYLRCMCSDTPTEWQAGRKKILDTKRVPQTTRISDPDNFRGLHSIKATPYEVVYGKPPP 1199

Query: 759  VHLPYLPGESNNSAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVF 580
              LPYLPGES N+ ++R+L+ RE+ +K+L+FHL RAQ+RM Q A++HRTDR   +GD VF
Sbjct: 1200 AFLPYLPGESKNAVINRSLSKREEMLKVLKFHLRRAQDRMKQVADRHRTDRQLQMGDMVF 1259

Query: 579  LKLQPYRQFTLRNQAFHKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRC 400
            +KL PYRQ ++  ++  KL PK+FGPY++ D+IG VAY++ELP++ +IHNVFHVSQLK+ 
Sbjct: 1260 VKLHPYRQVSVAARSNAKLAPKYFGPYKIIDKIGQVAYKVELPTSARIHNVFHVSQLKKY 1319

Query: 399  TNPSAAVIEHPAVPSVITSKGEPESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYY 220
               +    + P  P  I+   EPE IL R  VKR  RA TKVLVKWKN  PE AT E+YY
Sbjct: 1320 VGDAPTSTDLPVEPEAISLTREPEDILDRITVKRHGRAVTKVLVKWKNQVPEDATREYYY 1379

Query: 219  DLLRDYPAFH 190
            DL + YPAF+
Sbjct: 1380 DLKQKYPAFN 1389


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana]
 dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 1409 bits (3648), Expect = 0.0
 Identities = 713/1382 (51%), Positives = 947/1382 (68%), Gaps = 23/1382 (1%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPL--WPEYVADVRRRFGDLYEDPLAELI 4090
            P + +V++A+IH +  A  WH ++++       L  W  YV  ++ RF D  +DP+AEL 
Sbjct: 139  PEDMKVKMAAIHFDSHASTWHQSFIQSGVGLEVLYDWKGYVKLLKERFEDDCDDPMAELK 198

Query: 4089 QVKHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLA 3910
             ++ T  +  +   FEL +T+V++  E+ +S++LA L   TQ HVRMF P ++     L 
Sbjct: 199  HLQETDGIIDYHQKFELIKTRVNLSEEYLVSVYLAGLRTDTQMHVRMFQPQTVRHCLFLG 258

Query: 3909 KLHESTKITHQKPTQYKPPFT--KTNQTVTTKEPSPTQKPIFTKTN-------------- 3778
            K       T++K    KP  T   TN++  T   +  QK   +KT+              
Sbjct: 259  K-------TYEKAHPKKPANTTWSTNRSAPTGGYNKYQKEGESKTDHYGNKGNFKPVSQQ 311

Query: 3777 -KTMTPAEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEM--EGDDTQEEATSXXXX 3607
             K M+  EMS+RR+KGLC FCDE +TP H+L H++ Q+  M++  E +D +EE  +    
Sbjct: 312  PKKMSQQEMSDRRSKGLCYFCDEKYTPEHYLVHKKTQLFRMDVDEEFEDAREELVNDDDE 371

Query: 3606 XXXXXXXXXXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQ 3427
                          +S+ A++G+  Y+TMRV+G Y KK++ IL+DSGSTHNFLD N A +
Sbjct: 372  HMPQ----------ISVNAVSGIAGYKTMRVKGTYDKKIIFILIDSGSTHNFLDPNTAAK 421

Query: 3426 LGCKLEKVKPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWL 3247
            LGCK++     +V+   G KL       +F+W +    F +D++++PL   D++LG+QWL
Sbjct: 422  LGCKVDTAGLTRVSVADGRKLRVEGKVTDFSWKLQTTTFQSDILLIPLQGIDMVLGVQWL 481

Query: 3246 KSLGPILWDFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDT 3067
            ++LG I W+F KL M F     +V L G  + SV+ +  + +    E   +L  L V + 
Sbjct: 482  ETLGRISWEFKKLEMRFKFNNQKVLLHGLTSGSVREVKAQKLQKLQEDQVQLAMLCVQEV 541

Query: 3066 TPQFIIPSCSVSQSGTLQSQLPVE--IELLLEQYADIFNEPSELPPSRAGFDHKIPLKDD 2893
            +       C+++    L S+L  E  +E +L +Y DIF EP+ LPP R   +HKI L + 
Sbjct: 542  SESTEGELCTIN---ALTSELGEESVVEEVLNEYPDIFIEPTALPPFREKHNHKIKLLEG 598

Query: 2892 TMPVNIRPYRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYR 2713
            + PVN RPYRYSI QKN +DKLV ++LT G +Q S+SP+ASP VLV+KKDG+WRLCVDYR
Sbjct: 599  SNPVNQRPYRYSIHQKNEIDKLVEDLLTNGTVQASSSPYASPVVLVKKKDGTWRLCVDYR 658

Query: 2712 RLNHSTIKDRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHY 2533
             LN  T+KD FPIPLIEDLMDELGGA +FSK+DLR+GYHQ+RM   +  KTAFKTHSGH+
Sbjct: 659  ELNGMTVKDSFPIPLIEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQKTAFKTHSGHF 718

Query: 2532 EYLVMPFGLTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVA 2353
            EYLVMPFGLTNAPA+FQ LMN +F+ +LRKFV++FFDDILVYS+SL++H +HL QVF+V 
Sbjct: 719  EYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEHRQHLKQVFEVM 778

Query: 2352 RHHKLFLNKKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLA 2173
            R +KLF    KC FA  +VEYLGHFI+  G+ TDP KI+AV  WP P  +KQLRGFLGLA
Sbjct: 779  RANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAKIKAVKEWPQPTTLKQLRGFLGLA 838

Query: 2172 GYYRRFVKDFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFIL 1993
            GYYRRFV+ FG +A PL  L K DAF W+   Q AF+ LK AL  APVL LP F K F++
Sbjct: 839  GYYRRFVRSFGVIAGPLHALTKTDAFEWTAVAQQAFEDLKAALCQAPVLSLPLFDKQFVV 898

Query: 1992 ETDASGKGIGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPF 1813
            ETDA G+GIGAVLMQE HP+AYIS+ L  KQ  LSIYEKELLA+++A++KW  YL    F
Sbjct: 899  ETDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHF 958

Query: 1812 IIRTDQKSIKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMT 1633
            II+TDQ+S+KY+LEQRLNTP QQ W+ KL+ F++EIQY++GKEN  ADALSRVEG+E++ 
Sbjct: 959  IIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADALSRVEGSEVLH 1018

Query: 1632 LVLNNVSNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDT 1453
            + +  V  DLLK IQ  +  D+ +Q +I  +  +P S   +SW  N+LRR  K+VV ++ 
Sbjct: 1019 MAMTVVECDLLKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPAND 1078

Query: 1452 AVKSTLLQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIP 1273
             +K+T+L WLH S  GGHSGRD T  R+K LFYWKGM KD+  Y+R C  CQ+ K +   
Sbjct: 1079 NIKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAA 1138

Query: 1272 SPGLLQPLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEV 1093
            SPGLLQPLPIP  IW  +S+DFIEGLP S GK VI+VVVDRLSK AHF+AL HPY+AL V
Sbjct: 1139 SPGLLQPLPIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTV 1198

Query: 1092 AQTFLDSVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVN 913
            A  +LD+VFKLHG P+S +SDRD +F SEFW E F+LQGV+L  ++AYHPQSDGQ+E+VN
Sbjct: 1199 AHAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVN 1258

Query: 912  KALETYLRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGE 733
            + LETYLRCM  ++PQ W KWL LAE+WYNT +HSS + TPFE+VYGQ PPVHLPYLPGE
Sbjct: 1259 RCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGE 1318

Query: 732  SNNSAVDRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQF 553
            S  + V R+L  RED +  L+FHL+RAQ+RM Q A++HRT+R F IGDYV++KLQPYRQ 
Sbjct: 1319 SKVAVVARSLQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQ 1378

Query: 552  TLRNQAFHKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIE 373
            ++  +A  KL+PK+FGPY++ DR G VAY+L LPS +++H VFHVSQLK      +  + 
Sbjct: 1379 SVVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLKVLVGNVSTTVH 1438

Query: 372  HPAVPSVITSKGEPESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAF 193
             P+V   +  K  PE ++ RKMV R  +A TKVLVKW N   E ATWE+ +DL + +P F
Sbjct: 1439 LPSVMQDVFEK-VPEKVVERKMVNRQGKAVTKVLVKWSNEPLEEATWEFLFDLQKTFPEF 1497

Query: 192  HS 187
             +
Sbjct: 1498 EA 1499


>ref|XP_010491426.2| PREDICTED: uncharacterized protein LOC104769009 [Camelina sativa]
          Length = 1585

 Score = 1396 bits (3613), Expect = 0.0
 Identities = 708/1375 (51%), Positives = 926/1375 (67%), Gaps = 13/1375 (0%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPL--WPEYVADVRRRFGDLYEDPLAELI 4090
            P + +V++A+IH +G A  WH + M        L  W  Y   ++ RF D+ +DP+AEL 
Sbjct: 210  PGDFKVKMAAIHFDGDAADWHQSLMHSPLGRNVLRDWQAYKLLLQERFEDVLDDPIAELK 269

Query: 4089 QVKHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLA 3910
            Q++ T+ +  ++  FEL + ++S+  E+ +  +LA L   TQ H+RMF P S+ Q   L 
Sbjct: 270  QLQETNGIVEYLHRFELIRNRLSLSEEYLMRAYLAGLRLDTQMHIRMFQPQSVRQCLVLG 329

Query: 3909 KLHESTKITHQKPTQYKPPFTKTNQTVTTKEPSPTQKPI-----------FTKTNKTMTP 3763
            +L+E     HQK +       K+N T  T +     K               K  K ++ 
Sbjct: 330  RLYEKAH-PHQKGSSGGWSSAKSNSTSLTVKNQGVVKQTNQASGGNTGFQSPKNRKFLSQ 388

Query: 3762 AEMSERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEATSXXXXXXXXXXXX 3583
             EMSERRAKGLC  CDE +TP H+LKH++ Q+ M+E+E     EE               
Sbjct: 389  EEMSERRAKGLCFICDEKYTPEHYLKHKKTQVFMIEVE-----EEVGEQEYFEEQYETED 443

Query: 3582 XXXXXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCKLEKV 3403
                 ++S+  ++GV  Y+T++VRG + KK+L ILLD+GSTHNF++ + A  LG  ++  
Sbjct: 444  EKDMPRVSISVVSGVADYRTIKVRGTHGKKVLFILLDTGSTHNFINPSTAKALGVTVQSA 503

Query: 3402 KPMKVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLGPILW 3223
               +V    G+KL       +F WS     F  D +++PL  CD++LG+QWL  LG   W
Sbjct: 504  GVARVAVADGSKLGVQGKVSQFKWSFQGTAFKDDFMLIPLGGCDMVLGVQWLAPLGDTTW 563

Query: 3222 DFDKLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAELCFLQVNDTTPQFIIPS 3043
            +F KL M F     R+ L G K  +V+ +     N A E+  ++  +      PQ  +  
Sbjct: 564  NFQKLEMGFWWNKQRILLHGIKQGAVRTLKAAKFNKAQEEAVQISMICAQAVEPQEDMML 623

Query: 3042 CSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMPVNIRPYR 2863
            C+V  +          +EL  E +ADIF EP+ELPP R   +HKI LK+   P+N RPYR
Sbjct: 624  CAVEDNHNENVSNAAVLELK-ESFADIFAEPTELPPFRENHNHKIVLKEGADPINQRPYR 682

Query: 2862 YSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLNHSTIKDR 2683
            Y++ QK+ +DK+V ++L  G I+ S+SPF+SP VLV+KKDG+WRLCVDYR LN  TIK+ 
Sbjct: 683  YAVYQKDEIDKIVKDLLAAGTIRMSSSPFSSPVVLVKKKDGTWRLCVDYRGLNGLTIKNS 742

Query: 2682 FPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYLVMPFGLT 2503
            FPIPLIEDLMDELGG++VFSK+DLR+GYHQ+RM   +  KTAFKTH GH+EYLVMPFGLT
Sbjct: 743  FPIPLIEDLMDELGGSAVFSKIDLRAGYHQVRMEPADIQKTAFKTHGGHFEYLVMPFGLT 802

Query: 2502 NAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHHKLFLNKK 2323
            NAPA+FQ LMN +F+E+LRKFV+IFFDDILVYS+S+ DH  HL +VF+  R HKLF  + 
Sbjct: 803  NAPATFQGLMNSVFKEFLRKFVLIFFDDILVYSSSMTDHIVHLQKVFNTMREHKLFAKES 862

Query: 2322 KCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYYRRFVKDF 2143
            KC FAT +VEYLGH+I   GVSTDP K+ AV +WP+P N+KQLRGFLGLAGYYRRFVK+F
Sbjct: 863  KCEFATAQVEYLGHYIAAGGVSTDPTKVNAVADWPLPSNLKQLRGFLGLAGYYRRFVKNF 922

Query: 2142 GKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETDASGKGIG 1963
            G +A+PLT L KKDAF WS     AF  LK AL  APVL  P F K F++ETDA  KGIG
Sbjct: 923  GTIARPLTLLTKKDAFTWSVEASEAFTALKQALCEAPVLAFPRFDKPFLVETDACTKGIG 982

Query: 1962 AVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFIIRTDQKSIK 1783
            AVLMQE HP+A+IS+ L  KQ  LSIYEKELLA+V+A+QKW  YL    FIIRTDQ+S+K
Sbjct: 983  AVLMQEGHPLAFISRHLKGKQLNLSIYEKELLAVVFAVQKWRHYLLPNHFIIRTDQRSLK 1042

Query: 1782 YMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLVLNNVSNDL 1603
            Y+LEQRLNTP QQ W+ KL+ F++EIQY++GK+N AADALSRVEGAE++ + ++ +  DL
Sbjct: 1043 YLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKDNIAADALSRVEGAEVLHMAMSVLECDL 1102

Query: 1602 LKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAVKSTLLQWL 1423
            LK IQ  +  DA ++KLI ++  N  +   Y+W  ++LRR  K+VV ++  ++ ++LQW+
Sbjct: 1103 LKDIQAHYATDAELKKLIDDLAANIPAKKHYTWTQSILRRKTKIVVPNNIQLRDSILQWM 1162

Query: 1422 HDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSPGLLQPLPI 1243
            H S  GGH GRD T  ++K LFYWKGM  D+  Y+R C VCQ+ K +    PGLLQPLPI
Sbjct: 1163 HCSGTGGHLGRDATYQKVKGLFYWKGMAVDIQKYIRSCAVCQQCKYDTSAYPGLLQPLPI 1222

Query: 1242 PGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQTFLDSVFK 1063
            P  IW  +S+DFI+GLP S GK VI VVVDRL+K AHF+AL HPY+A+ VAQ F+D+VFK
Sbjct: 1223 PETIWTDLSMDFIDGLPDSAGKTVIFVVVDRLTKAAHFMALAHPYSAVTVAQAFMDTVFK 1282

Query: 1062 LHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKALETYLRCM 883
            LHG P S +SDRD IF+S FW ELF+LQGV L  S+AYHPQSDGQ+E+VN+ LETYLRCM
Sbjct: 1283 LHGCPRSIVSDRDTIFVSTFWRELFTLQGVDLKFSSAYHPQSDGQTEVVNRCLETYLRCM 1342

Query: 882  TSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGESNNSAVDRTL 703
             S++P  W  WLPLAEFWYNT FH++ + +PFE VYGQ PPVHLPYLPGES  + V R+L
Sbjct: 1343 CSDKPHLWSSWLPLAEFWYNTNFHTATQMSPFEAVYGQSPPVHLPYLPGESKVAVVARSL 1402

Query: 702  TAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFTLRNQAFHKL 523
              RE  + +L+FHLLRAQ+RM Q A+ HRTDR F IGD VF+K QPYRQ ++  ++  KL
Sbjct: 1403 QERESMLLILKFHLLRAQHRMKQFADSHRTDRSFEIGDSVFVKHQPYRQGSVVVRSNQKL 1462

Query: 522  NPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIEHPAVPSVITS 343
            +PK+FGPY++ DR G VAY+L LP  ++IH VFHVSQLK          + P++   +  
Sbjct: 1463 SPKYFGPYKIVDRCGKVAYKLLLPGGSQIHPVFHVSQLKAVVGQVLTSTQLPSIVVDVLV 1522

Query: 342  KGEPESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAFHS*GQ 178
            K  P SIL RKMVKR  RA T VLV+W N   E ATWE+ YDL R +PAF   GQ
Sbjct: 1523 KA-PVSILDRKMVKRQGRAVTMVLVQWTNETAEEATWEYLYDLQRKFPAFEPCGQ 1576


>dbj|GAU27517.1| hypothetical protein TSUD_147110 [Trifolium subterraneum]
          Length = 1224

 Score = 1355 bits (3506), Expect = 0.0
 Identities = 653/941 (69%), Positives = 767/941 (81%), Gaps = 1/941 (0%)
 Frame = -3

Query: 3006 LPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMPVNIRPYRYSIIQKNIVDKL 2827
            +P EI+ LL  YAD+F  P  LPP R GFDHK+PLK+ T P NIRPYRY+ IQK+IVD L
Sbjct: 282  IPAEIKQLLHLYADLFENPQGLPPPRPGFDHKLPLKEGTTPFNIRPYRYASIQKDIVDGL 341

Query: 2826 VNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLNHSTIKDRFPIPLIEDLMDE 2647
            V EML +G IQ+SNSPFASP VLVRKK G WRLCVDYRRLN +TIKD+FPIPLIEDLMDE
Sbjct: 342  VEEMLEKGWIQHSNSPFASPVVLVRKKGGKWRLCVDYRRLNQATIKDKFPIPLIEDLMDE 401

Query: 2646 LGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYLVMPFGLTNAPASFQSLMNH 2467
            LGG+ ++SKLDL+SGYHQ+RMA GEEYKT FKTH+GH+EYLVMPFGLTNAPASFQSLMN 
Sbjct: 402  LGGSVIYSKLDLQSGYHQMRMAAGEEYKTTFKTHAGHFEYLVMPFGLTNAPASFQSLMNI 461

Query: 2466 LFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHHKLFLNKKKCHFATDRVEYL 2287
            LFQ+YLRKFVIIFFDDIL+YS+SL+DH  HL +VF + R HKLFL K+KC FAT RVEYL
Sbjct: 462  LFQQYLRKFVIIFFDDILIYSSSLEDHVLHLDKVFQILREHKLFLRKEKCCFATSRVEYL 521

Query: 2286 GHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYYRRFVKDFGKVAKPLTDLLK 2107
            GH IT+ GVSTDP KIQ V++WP+P ++KQLRGFLGLAGYYRRFVKDFGK+AKPL D+LK
Sbjct: 522  GHVITKEGVSTDPNKIQVVSSWPLPSSVKQLRGFLGLAGYYRRFVKDFGKIAKPLNDMLK 581

Query: 2106 KDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETDASGKGIGAVLMQENHPIAY 1927
            K AF WS     AF  LK+AL + PVL LP+F + FILET+ASGKGIGAVLMQ  HPIAY
Sbjct: 582  KYAFHWSIEATQAFTELKHALTSTPVLALPNFNQPFILETNASGKGIGAVLMQNKHPIAY 641

Query: 1926 ISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFIIRTDQKSIKYMLEQRLNTPFQ 1747
            ISKALG KQQA+S+YE+ELLAIVYAIQKWSTYLA+R FII+TDQKSIK+MLEQRLNTPFQ
Sbjct: 642  ISKALGPKQQAMSVYERELLAIVYAIQKWSTYLAYRHFIIKTDQKSIKFMLEQRLNTPFQ 701

Query: 1746 QAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTLVLNNVSNDLLKQIQLSWNQDA 1567
            Q WMAKLMG++FEI YKEG  N  ADALSR  GAE++ L+LNN   DLL++I+ SW+ D 
Sbjct: 702  QVWMAKLMGYDFEIHYKEGVNNNVADALSRRTGAELLPLLLNNAQEDLLERIKESWSNDV 761

Query: 1566 AIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAVKSTLLQWLHDSAAGGHSGRD 1387
             +   I E+  +  SH K++W    LRR GKLV+G+D  +K  +L WLHDS +GGHSGRD
Sbjct: 762  VLHNSIQELQADAKSHPKFTWCRGELRRKGKLVIGADPTLKQIILNWLHDSPSGGHSGRD 821

Query: 1386 NTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSPGLLQPLPIPGRIWDSISLDF 1207
             T AR+KSLF+WKG+ KD+  YVR C VCQR KP+   SPGLLQPLPIP  +WD+IS+DF
Sbjct: 822  VTAARVKSLFFWKGVNKDIQHYVRNCDVCQRCKPDLSASPGLLQPLPIPKLVWDAISMDF 881

Query: 1206 IEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQTFLDSVFKLHGLPSSFISDR 1027
            IEGLP S  KQVI VVVDRLSKYAHF+AL HPYTAL+VAQ FLD+VFKLHG+PS+  SDR
Sbjct: 882  IEGLPTSSKKQVIFVVVDRLSKYAHFMALAHPYTALDVAQQFLDNVFKLHGMPSTITSDR 941

Query: 1026 DPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKALETYLRCMTSEQPQDWIKWL 847
            DPIFLS+ W+ELF LQGV+LNKSTAYHPQSDGQ+E+VNK LETYLRCM +++P  W +WL
Sbjct: 942  DPIFLSKVWNELFQLQGVALNKSTAYHPQSDGQTEVVNKCLETYLRCMCADKPSSWSQWL 1001

Query: 846  PLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGESNNSAVDRTLTAREDAIKLLRF 667
             LAE+WYNT +H+SI +TPFEVVYGQPPP+HLPYLP E+  + VDR+L+AR+ AI+LL+F
Sbjct: 1002 SLAEWWYNTNYHTSIHSTPFEVVYGQPPPIHLPYLPEEATAAVVDRSLSARDAAIQLLKF 1061

Query: 666  HLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFTLRNQAFHKLNPKFFGPYRVTD 487
            HLLRAQN+M QQ NKHR+D+ F+IGD V+LKLQPYRQ T+R   FHKL PKF+GP+++ D
Sbjct: 1062 HLLRAQNKMTQQVNKHRSDKTFSIGDMVYLKLQPYRQSTIRKSQFHKLVPKFYGPFKILD 1121

Query: 486  RIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPS-AAVIEHPAVPSVITSKGEPESILARK 310
             IG VAYQLELP    IHNVFHVSQLK C NP  A     P  P   +S  EPE+IL RK
Sbjct: 1122 SIGQVAYQLELPPNAAIHNVFHVSQLKLCFNPQIATTYPLPNDPLNTSSIKEPEAILERK 1181

Query: 309  MVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAFHS 187
            MVKRG+ AATKVLV+WK      A WE+YYDLL+ +P FHS
Sbjct: 1182 MVKRGNSAATKVLVQWKGEPSTQAIWEFYYDLLKKFPNFHS 1222



 Score =  147 bits (370), Expect = 1e-31
 Identities = 72/129 (55%), Positives = 91/129 (70%)
 Frame = -3

Query: 3738 KGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEATSXXXXXXXXXXXXXXXXXQMS 3559
            +GLCM+CDEPFTPGH  KH+R Q+++ME++ D++  E+                   Q+S
Sbjct: 149  QGLCMYCDEPFTPGHQFKHKRTQVIVMELDDDESILESNEETAVNCSVGVDTQSEEMQLS 208

Query: 3558 LQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCKLEKVKPMKVTGG 3379
            L ALTG+PSYQTM++ G + +K LQILLDSGSTHNFLDL  A +LGCKLE V PM VT G
Sbjct: 209  LHALTGLPSYQTMKICGSHNQKTLQILLDSGSTHNFLDLEVAKKLGCKLEPVPPMIVTAG 268

Query: 3378 GGNKLIAPY 3352
            GGNKL AP+
Sbjct: 269  GGNKLHAPF 277



 Score =  112 bits (280), Expect = 5e-21
 Identities = 50/77 (64%), Positives = 64/77 (83%)
 Frame = -3

Query: 4257 EQRVRLASIHLEGLALQWHLNYMRGRFDEYPLWPEYVADVRRRFGDLYEDPLAELIQVKH 4078
            + +VRLASIHLEG +LQWH+NYM+ +++ YP W +YV DV +RFG+++EDPLAELIQVK 
Sbjct: 73   DAKVRLASIHLEGPSLQWHVNYMKAKYNVYPTWTDYVVDVTQRFGEVFEDPLAELIQVKQ 132

Query: 4077 TSSVQTFIDDFELAQTQ 4027
            T SVQ +ID FELA TQ
Sbjct: 133  TGSVQEYIDAFELAYTQ 149


>gb|PKA46982.1| putative mitochondrial protein [Apostasia shenzhenica]
          Length = 1535

 Score = 1291 bits (3342), Expect = 0.0
 Identities = 658/1380 (47%), Positives = 919/1380 (66%), Gaps = 21/1380 (1%)
 Frame = -3

Query: 4263 PPEQRVRLASIHLEGLALQWHLNYMRGRFDEYPL-WPEYVADVRRRFGDL-YEDPLAELI 4090
            P E +V+LASI+L+G+AL+WH N+ R   +  P+ W  Y   ++ RFG+  Y+DP+ EL 
Sbjct: 156  PQEWKVKLASIYLDGIALEWHQNFSRS--NPTPIGWGVYKEAIKERFGETAYDDPMYELS 213

Query: 4089 QVKHTSSVQTFIDDFELAQTQVSILPEHALSIFLANLDPQTQAHVRMFNPTSIAQAANLA 3910
             +K T ++Q + + F+   T+V +   + +S +L  L  +    VR+  P S+ +A ++A
Sbjct: 214  ILKQTGTIQDYNNQFDALLTRVVLPENYVVSCYLGGLKEELLGMVRLMKPKSLREAFSVA 273

Query: 3909 KLHESTKITHQKPTQ--YKPPFTK-----TNQTVTTKEPSPTQKPIFTKTNK-TMTPAEM 3754
            KL ES  I  QK  +  YKP  T       ++TV +K  + +      +T++  ++ +  
Sbjct: 274  KLQESNLIQQQKKNKGWYKPGTTHGAGFIASETVASKTAAGSNGSQSKETSRRVISNSTF 333

Query: 3753 SERRAKGLCMFCDEPFTPGHHLKHRRVQMMMMEMEGDDTQEEATSXXXXXXXXXXXXXXX 3574
             ERRAKGLC +C+E +T GH+ + +++ ++ M  E      EA                 
Sbjct: 334  DERRAKGLCFWCNEKYTQGHNCRRKQLYLISMT-EDTGVNPEAGEYQVEEMIEEEVELES 392

Query: 3573 XXQMSLQALTGVPSYQTMRVRGLYYKKLLQILLDSGSTHNFLDLNKAIQLGCKLEKVKPM 3394
              ++SL A+TG+PS+QTM V G   KK + IL+DSGSTHNFLD +       ++E +   
Sbjct: 393  EPKVSLNAITGIPSFQTMTVMGTIKKKRIYILIDSGSTHNFLDPSIVELDDYEVETIPEQ 452

Query: 3393 KVTGGGGNKLIAPYICKEFTWSMHNHEFSADMIVLPLVCCDLILGIQWLKSLGPILWDFD 3214
            +V    G K+      K+F W M    F+A+ +++PL   ++ILG+QWL  LG + WDF 
Sbjct: 453  QVVVANGGKISLCQQIKKFQWQMQGSTFTANALLMPLESYNMILGVQWLSELGMVNWDFK 512

Query: 3213 KLLMEFSVQGSRVQLRGTKTPSVKLISNEAMNAAVEQGAE-----LCFLQVNDTTPQFII 3049
             L M+F++  + + LRGT+ P ++++S + ++ A+           C+ QV+   P F  
Sbjct: 513  NLTMKFTLNRNPIILRGTRIPFLQVVSEKQLDKAILNSTTAIYLCFCYSQVHSINPSF-- 570

Query: 3048 PSCSVSQSGTLQSQLPVEIELLLEQYADIFNEPSELPPSRAGFDHKIPLKDDTMPVNIRP 2869
               S +    L +Q   E+++LLE Y DIF EP  LPP RA  DH+I LK+ T P+N++P
Sbjct: 571  --SSYNPMNALNTQQQGELDMLLEFYVDIFMEPRGLPPHRAQ-DHQIILKEGTDPINVKP 627

Query: 2868 YRYSIIQKNIVDKLVNEMLTQGIIQYSNSPFASPTVLVRKKDGSWRLCVDYRRLNHSTIK 2689
            YRY  +QK  +++L+ EM   GII+ S SPF+SP VL++KKDGSWRLCVDYR LN  TI+
Sbjct: 628  YRYPALQKAAIERLIMEMKDAGIIRDSASPFSSPIVLIKKKDGSWRLCVDYRELNSKTIR 687

Query: 2688 DRFPIPLIEDLMDELGGASVFSKLDLRSGYHQLRMAEGEEYKTAFKTHSGHYEYLVMPFG 2509
            DRFPIP+IE+L+DEL G++ FSKLDLRSGY Q+RM E +  KTAF+TH GHYE+LVMPFG
Sbjct: 688  DRFPIPVIEELLDELHGSTYFSKLDLRSGYWQVRMMEEDIRKTAFRTHEGHYEFLVMPFG 747

Query: 2508 LTNAPASFQSLMNHLFQEYLRKFVIIFFDDILVYSASLQDHSKHLSQVFDVARHHKLFLN 2329
            LTNAP +FQ LMN +F+ YLR FV++FFDDILVYS +  +H  HL  V DV   H L + 
Sbjct: 748  LTNAPVTFQKLMNSIFKPYLRIFVLVFFDDILVYSRTWDEHLHHLKTVLDVLATHSLKVK 807

Query: 2328 KKKCHFATDRVEYLGHFITQAGVSTDPVKIQAVNNWPVPKNIKQLRGFLGLAGYYRRFVK 2149
            + KC FA   +EYLGH I+  GVSTDP KI+A+  WP P ++++LRGFLGLAGYYRRF+K
Sbjct: 808  RNKCDFAVQSIEYLGHCISSRGVSTDPNKIRAIVEWPKPSSVRELRGFLGLAGYYRRFIK 867

Query: 2148 DFGKVAKPLTDLLKKDAFLWSDSTQTAFQLLKNALVTAPVLILPDFGKTFILETDASGKG 1969
            D+GK+++ LT+LLKKDAF W    + +F  LK  L   PVL LPDF + F++ETDA G G
Sbjct: 868  DYGKISRGLTELLKKDAFKWDSQAEVSFSQLKQQLSQPPVLALPDFTQPFVVETDACGAG 927

Query: 1968 IGAVLMQENHPIAYISKALGFKQQALSIYEKELLAIVYAIQKWSTYLAHRPFIIRTDQKS 1789
            IGAVLMQ   PIAY SK L  K Q L +Y+KE+LAIV AIQKW  YL    F ++TD +S
Sbjct: 928  IGAVLMQSGRPIAYFSKGLSTKHQQLPVYDKEMLAIVAAIQKWRPYLLGNHFKVKTDHQS 987

Query: 1788 IKYMLEQRLNTPFQQAWMAKLMGFEFEIQYKEGKENKAADALSRVEGAEMMTL--VLNNV 1615
            ++++LEQR+ TP QQ W++KL G++FEI Y++G+EN AADALSR      +TL  VL  +
Sbjct: 988  LRFLLEQRITTPTQQKWLSKLAGYDFEIIYRKGQENIAADALSRRTQTASITLNAVLEGM 1047

Query: 1614 SNDLLKQIQLSWNQDAAIQKLIGEITTNPLSHSKYSWKNNLLRRNGKLVVGSDTAVKSTL 1435
              +LL  ++ SWN DA +  +I ++      +  Y+W+NNLLR  GKLV+GSD A++  L
Sbjct: 1048 PTELLNGVRNSWNLDAKLLDIIRQLQNKITVNKPYTWQNNLLRWKGKLVIGSDFALRQQL 1107

Query: 1434 LQWLHDSAAGGHSGRDNTLARLKSLFYWKGMTKDVHTYVRECVVCQRSKPEQIPSPGLLQ 1255
            +Q +H  + GGHSG   TL +LKS+F+WKGM K    +++EC VCQ++K E     G LQ
Sbjct: 1108 IQMIHMGSMGGHSGFIPTLHKLKSMFHWKGMGKATKIFIQECNVCQQNKYETSSKSGPLQ 1167

Query: 1254 PLPIPGRIWDSISLDFIEGLPQSKGKQVILVVVDRLSKYAHFLALHHPYTALEVAQTFLD 1075
            PLPIP ++W ++S+DFIEGLP+S GK  I VVVDRLSKYAHF+AL HP++A  VAQ +LD
Sbjct: 1168 PLPIPEKVWTNVSMDFIEGLPKSNGKDTIFVVVDRLSKYAHFMALAHPFSATTVAQAYLD 1227

Query: 1074 SVFKLHGLPSSFISDRDPIFLSEFWSELFSLQGVSLNKSTAYHPQSDGQSEIVNKALETY 895
            +V+KLHG+P   +SDRD IFLS FW EL  L  V +  STAYHPQ+DGQ+E+VN+ LETY
Sbjct: 1228 NVYKLHGMPEKIVSDRDKIFLSRFWQELLKLLKVQVQMSTAYHPQTDGQTEVVNRCLETY 1287

Query: 894  LRCMTSEQPQDWIKWLPLAEFWYNTTFHSSIKTTPFEVVYGQPPPVHLPYLPGESNNSAV 715
            LRCMT E+P++W+KWLPL+E+WYNT +HSS+K +P+EV+YGQ PP+H+PYL G +   AV
Sbjct: 1288 LRCMTVERPKEWLKWLPLSEWWYNTNYHSSLKCSPYEVLYGQKPPLHVPYLAGTAVVDAV 1347

Query: 714  DRTLTAREDAIKLLRFHLLRAQNRMAQQANKHRTDRVFAIGDYVFLKLQPYRQFTLRNQA 535
            DR+L +RE+ IKLL+ HLL+A NRM  QA+KHR +R F +GD V++KLQPYRQ ++ ++ 
Sbjct: 1348 DRSLQSRENFIKLLKHHLLQAMNRMKVQADKHRKEREFEVGDLVYVKLQPYRQDSVSHRM 1407

Query: 534  FHKLNPKFFGPYRVTDRIGSVAYQLELPSTTKIHNVFHVSQLKRCTNPSAAVIEHPAVPS 355
              KL PK+FGP+ +  ++G+VAY+L+LP   KIH VFHVS LK+  + S   IE    PS
Sbjct: 1408 SRKLAPKYFGPFEILAKVGTVAYKLKLPDDAKIHPVFHVSILKK--SISNRPIEE-VFPS 1464

Query: 354  VITS----KGEPESILARKMVKRGHRAATKVLVKWKNLAPELATWEWYYDLLRDYPAFHS 187
             +T+    K EP +IL R+ + R      +VL++W N +PE A+WE    +   YP F S
Sbjct: 1465 ELTTFGQLKAEPVAILKRRTILRKRHFLEQVLIQWSNTSPEDASWEDLETICSQYPHFMS 1524