BLASTX nr result
ID: Astragalus22_contig00025848
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus22_contig00025848
(863 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP78233.1| Retrovirus-related Pol polyprotein from transposo... 233 2e-69
gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposo... 229 3e-67
gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposo... 220 3e-67
gb|KYP78025.1| Retrovirus-related Pol polyprotein from transposo... 219 2e-66
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo... 225 3e-66
gb|PNX92571.1| histone deacetylase [Trifolium pratense] 229 1e-64
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo... 226 1e-64
dbj|GAU32278.1| hypothetical protein TSUD_62940 [Trifolium subte... 227 7e-64
gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense] 227 7e-64
gb|PNY02430.1| retrovirus-related Pol polyprotein from transposo... 225 2e-63
gb|KYP47805.1| Retrovirus-related Pol polyprotein from transposo... 218 3e-63
ref|XP_014632953.1| PREDICTED: uncharacterized protein LOC102666... 218 4e-63
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo... 222 4e-63
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo... 224 8e-63
dbj|GAU34785.1| hypothetical protein TSUD_205890 [Trifolium subt... 221 2e-62
dbj|GAU48593.1| hypothetical protein TSUD_179750 [Trifolium subt... 223 2e-62
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo... 223 3e-62
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo... 223 3e-62
dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subte... 222 5e-62
gb|PNX91972.1| retrovirus-related Pol polyprotein from transposo... 221 1e-61
>gb|KYP78233.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 540
Score = 233 bits (595), Expect = 2e-69
Identities = 107/167 (64%), Positives = 135/167 (80%), Gaps = 1/167 (0%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHIV++GL+LL +A +P+++WD+AF T+VYLINRLPS +N +PY
Sbjct: 40 PHTHHQNGVVERKHRHIVELGLTLLVEADLPMQFWDYAFLTSVYLINRLPSSSIQNEVPY 99
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
L+N TPDY+FLKVFGC+CFP LRPY+ TK Q R+ EC+FLGYS+SHKGYKCL + GR+
Sbjct: 100 QKLFNNTPDYHFLKVFGCACFPHLRPYNRTKLQLRSQECLFLGYSTSHKGYKCLAADGRL 159
Query: 503 FISKDVLFNETNFPYVRLFPVTSSPTANTYFTLP-PLQMPNQPPSTA 366
+ISKDV+FNE FPY LF TSSPT ++ T+ PL + N PP TA
Sbjct: 160 YISKDVIFNEAKFPYKTLF--TSSPTHSSQNTIEVPLTVTNSPPITA 204
Score = 78.2 bits (191), Expect = 2e-12
Identities = 36/57 (63%), Positives = 44/57 (77%)
Frame = -1
Query: 173 LVHPQNTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
++HP NTHPM+TRAK GIV+PRL PTLLLT EP T QAL++ W AMQ E++AL
Sbjct: 267 IIHPHNTHPMVTRAKDGIVKPRLQPTLLLTHTEPKTTRQALSNSTWFAAMQAEHNAL 323
>gb|KYP42260.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 623
Score = 229 bits (585), Expect = 3e-67
Identities = 107/189 (56%), Positives = 130/189 (68%), Gaps = 21/189 (11%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHI++MGL+LLSQA +P+KYWDH FHT VYLINRLPS +PY
Sbjct: 254 PHTHHQNGVVERKHRHIIEMGLTLLSQAFLPMKYWDHVFHTTVYLINRLPSLSHNKIVPY 313
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
LY+K DY F+KVFGC+C+PLL PY++ K FR+ EC+FLGYSSSHKGYKCLD+ G +
Sbjct: 314 QVLYSKDLDYTFIKVFGCACYPLLTPYNTNKLHFRSTECVFLGYSSSHKGYKCLDTNGLL 373
Query: 503 FISKDVLFNETNFPYVRLFP---------------------VTSSPTANTYFTLPPLQMP 387
FISKDV+FNE FPY L P V S+ T+N+ + PL
Sbjct: 374 FISKDVIFNEQRFPYQHLIPSTTSVSNSSTNFPLGVLSSNDVASTSTSNSSSSSSPLSAH 433
Query: 386 NQPPSTATV 360
PPST+ V
Sbjct: 434 TLPPSTSNV 442
Score = 78.2 bits (191), Expect = 2e-12
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = -1
Query: 158 NTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
N HPM TR+K GIV+P+LHPTLLLTT EP ++ QAL+SP W+ M +EYDAL
Sbjct: 441 NVHPMQTRSKSGIVRPKLHPTLLLTTTEPTSLKQALSSPSWKTVMSLEYDAL 492
>gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 297
Score = 220 bits (561), Expect = 3e-67
Identities = 101/169 (59%), Positives = 130/169 (76%), Gaps = 2/169 (1%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHIVD+G++LL AS+P+ +WD+ F TAVYLINRLP+ IP+
Sbjct: 40 PHTHHQNGVVERKHRHIVDIGITLLYHASLPLTFWDYVFSTAVYLINRLPTASLNFDIPF 99
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
+ L+ +TPDYNFLK FGC CF LRPY + K FR+ EC+FLGYS+SHKGYKCL ++G++
Sbjct: 100 TVLFKQTPDYNFLKTFGCVCFSFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKI 159
Query: 503 FISKDVLFNETNFPYVRLFPVTSS--PTANTYFTLPPLQMPNQPPSTAT 363
+ISKDV+FNET FPY+ LF TS+ P+ + YFTL P P +TA+
Sbjct: 160 YISKDVIFNETRFPYLDLFQHTSTPVPSPSQYFTLNPDLSPPCSHTTAS 208
>gb|KYP78025.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 339
Score = 219 bits (559), Expect = 2e-66
Identities = 103/170 (60%), Positives = 124/170 (72%), Gaps = 2/170 (1%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNG IERKHRHI+D GL+LL AS+P+K+WD AF T VYL NRLPS +PY
Sbjct: 47 PHTHHQNGTIERKHRHILDSGLTLLHHASLPLKFWDFAFMTVVYLFNRLPSVALNFVVPY 106
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
+ L+ PDY+FLK FGC CFPLLRPY++ K +R+ EC+FLGYS +HKGYKCL +TGR+
Sbjct: 107 TILFKTPPDYDFLKSFGCVCFPLLRPYNTHKLDYRSQECLFLGYSHAHKGYKCLSATGRI 166
Query: 503 FISKDVLFNETNFPYVRLFPV--TSSPTANTYFTLPPLQMPNQPPSTATV 360
+ISKDV+FNE FPY LFP SS T YFTL PN PST+ +
Sbjct: 167 YISKDVIFNEQRFPYAHLFPQCHVSSSTLPQYFTL----QPNLSPSTSLI 212
Score = 58.5 bits (140), Expect = 4e-06
Identities = 28/52 (53%), Positives = 33/52 (63%)
Frame = -1
Query: 158 NTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
N HPM TR+K GI +P+LH ++ L EP TV AL P W AMQ EY AL
Sbjct: 283 NNHPMQTRSKPGIHKPKLHSSIFLVHCEPKTVKLALVDPLWFAAMQQEYTAL 334
>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 537
Score = 225 bits (573), Expect = 3e-66
Identities = 103/181 (56%), Positives = 135/181 (74%), Gaps = 15/181 (8%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNG++ERKHRHIV++GL++L+QA +P+++WDHAF T+VYLINRLPS ++ +P+
Sbjct: 190 PHTHHQNGIVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQHDVPF 249
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
L+++ PDYNFL++FGCSCFP LRPY+ K Q R+ EC+FLGYS+SHKGYKCL TGR+
Sbjct: 250 RKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQLRSQECVFLGYSTSHKGYKCLAPTGRI 309
Query: 503 FISKDVLFNETNFPYVRLFP--VTSSPTANTYFTL-------------PPLQMPNQPPST 369
FISKDV+F ET FPY LFP T+ PT++ L PPL PN P+T
Sbjct: 310 FISKDVIFCETRFPYPSLFPASATNPPTSSIPVPLVITSLQPPMPTDSPPLISPNTSPTT 369
Query: 368 A 366
+
Sbjct: 370 S 370
Score = 59.3 bits (142), Expect = 3e-06
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = -1
Query: 158 NTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
N H M TRAK GIV+P L PTLLLT EP + QAL + W AM+ EY+AL
Sbjct: 407 NIHSMTTRAKAGIVKPCLQPTLLLTHTEPKSTKQALANDTWLAAMKQEYNAL 458
>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
Length = 1488
Score = 229 bits (585), Expect = 1e-64
Identities = 108/172 (62%), Positives = 134/172 (77%), Gaps = 4/172 (2%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHIVD+GL+LLSQA++PI +WD+AF TAVYLINRLPS PY
Sbjct: 716 PHTHHQNGVVERKHRHIVDLGLTLLSQATLPITFWDYAFPTAVYLINRLPSSSINFQTPY 775
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
L+ + PDY+FLKVFGC+CFPLLRPYH+ K +FR+ EC+FLGYS SHKGY+CL +GR+
Sbjct: 776 FLLFKQHPDYHFLKVFGCACFPLLRPYHNHKLEFRSQECLFLGYSPSHKGYRCLSPSGRL 835
Query: 503 FISKDVLFNETNFPYVRLFPVTS----SPTANTYFTLPPLQMPNQPPSTATV 360
++SKDVLFNE+ FPY LFP++S SP + + F LPPL P P T +
Sbjct: 836 YVSKDVLFNESRFPYKELFPISSGSSHSPPSKS-FKLPPL--PTFPSITTDI 884
>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 785
Score = 226 bits (575), Expect = 1e-64
Identities = 99/163 (60%), Positives = 128/163 (78%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHIV++GL++L+QA +P+++WDHAF T+VYLINRLPS +N +P+
Sbjct: 554 PHTHHQNGVVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQNDVPF 613
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
L+++ PDYNFL++FGCSCFP LRPY+ K QFR+ EC+FLGYS+SHKGYKCL TGR+
Sbjct: 614 RKLFHQLPDYNFLRIFGCSCFPHLRPYNKNKLQFRSQECVFLGYSTSHKGYKCLAPTGRI 673
Query: 503 FISKDVLFNETNFPYVRLFPVTSSPTANTYFTLPPLQMPNQPP 375
FISKDV+F ET FPY LFP ++ +P + QPP
Sbjct: 674 FISKDVVFCETRFPYPSLFPAPATNPLTPSIPVPLVITNPQPP 716
>dbj|GAU32278.1| hypothetical protein TSUD_62940 [Trifolium subterraneum]
Length = 1409
Score = 227 bits (579), Expect = 7e-64
Identities = 100/159 (62%), Positives = 127/159 (79%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRH+VD+GL+LLSQA++P+ YWDHAF TAV+LINRLP+ +PY
Sbjct: 669 PHTHHQNGVVERKHRHVVDLGLTLLSQANLPLTYWDHAFLTAVHLINRLPTASLNFKVPY 728
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
+ L+ K PDYN LKVFG +CFPL+RPY+S KF FR+ ECIFLGYS++HKGYKCL TGR+
Sbjct: 729 TTLFQKDPDYNSLKVFGSACFPLIRPYNSHKFDFRSHECIFLGYSTTHKGYKCLSPTGRI 788
Query: 503 FISKDVLFNETNFPYVRLFPVTSSPTANTYFTLPPLQMP 387
++SKDV+FNE+ FPY LFP +S +N +P +P
Sbjct: 789 YVSKDVMFNESRFPYESLFPTPNSALSNPTPDIPLTTLP 827
Score = 60.1 bits (144), Expect = 2e-06
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = -1
Query: 158 NTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
NTHPM TR K G++ P+++P LLLT EP T QAL W AM E++AL
Sbjct: 897 NTHPMQTRVKSGLILPKINPKLLLTHTEPRTTKQALQDRKWLSAMTEEFEAL 948
>gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]
Length = 1489
Score = 227 bits (579), Expect = 7e-64
Identities = 108/168 (64%), Positives = 132/168 (78%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRH+VD+GL+LLSQA++PI YWDHAF TAV+LINRLP+ IPY
Sbjct: 724 PHTHHQNGVVERKHRHVVDLGLTLLSQANLPITYWDHAFLTAVHLINRLPTAALSFKIPY 783
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
+ L+NK PDY+ LKVFGC+CFPLLRPY+S K FR+ ECIF+GYS++HKGYKCL +G++
Sbjct: 784 TVLFNKIPDYHSLKVFGCACFPLLRPYNSHKLDFRSHECIFMGYSNTHKGYKCLSPSGKI 843
Query: 503 FISKDVLFNETNFPYVRLFPVTSSPTANTYFTLPPLQMPNQPPSTATV 360
FISKDVLFNE FPY LFP SP N T+ P +P+ P ST +
Sbjct: 844 FISKDVLFNEYRFPYQFLFP---SPMKN---TILPSPVPDIPISTLPI 885
Score = 66.6 bits (161), Expect = 2e-08
Identities = 32/52 (61%), Positives = 38/52 (73%)
Frame = -1
Query: 158 NTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
NTH M TR+K GIV P+ +PTLLLT EP TV QAL+ P W AM+ E+DAL
Sbjct: 952 NTHTMQTRSKSGIVLPKQNPTLLLTHTEPKTVKQALSIPQWYNAMKDEFDAL 1003
>gb|PNY02430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 1064
Score = 225 bits (574), Expect = 2e-63
Identities = 107/185 (57%), Positives = 136/185 (73%), Gaps = 18/185 (9%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHIVD+GL+LLSQAS+P+ YWD+AF TAVYLINRLPS IPY
Sbjct: 708 PHTHHQNGVVERKHRHIVDLGLTLLSQASLPLSYWDYAFLTAVYLINRLPSAPLDFKIPY 767
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
+ L+++ PDY FLKVFGC+CFPLLRPY++ K +R+ EC+FLGYS SHKGY+CL GR+
Sbjct: 768 TLLFHQDPDYKFLKVFGCACFPLLRPYNTHKLDYRSHECLFLGYSPSHKGYRCLSPNGRL 827
Query: 503 FISKDVLFNETNFPYVRLF--PVTSSPTANTYFTLPPL----------------QMPNQP 378
FISKDV+FNE+ FP++ LF P + P+ ++ TL PL +PN P
Sbjct: 828 FISKDVIFNESRFPFIDLFTSPHSVVPSKSSAVTLSPLVHHPSHSPSPTSSPSPSIPNSP 887
Query: 377 PSTAT 363
P +A+
Sbjct: 888 PPSAS 892
Score = 75.5 bits (184), Expect = 2e-11
Identities = 37/58 (63%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -1
Query: 173 LVH-PQNTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
+VH P N HPM+TRAK G QPRL P LLLT EP +V QAL P W+ AMQ EYDAL
Sbjct: 924 VVHKPSNLHPMLTRAKDGFTQPRLEPRLLLTHIEPASVKQALQVPEWKTAMQAEYDAL 981
>gb|KYP47805.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 555
Score = 218 bits (554), Expect = 3e-63
Identities = 99/168 (58%), Positives = 134/168 (79%), Gaps = 1/168 (0%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+E KHRHIV++GL++L++A++P+++ D+AF T+VYLIN+LPS +N +PY
Sbjct: 310 PHTHHQNGVVEHKHRHIVELGLTMLAKANLPMQFLDYAFLTSVYLINQLPSSSIQNEVPY 369
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
L+NK PDY+FLKVFGCSCFP LRPY+ +K Q R+ EC+FLGYS+SHKGYKCL + GR+
Sbjct: 370 QKLFNKIPDYHFLKVFGCSCFPHLRPYNKSKLQLRSQECLFLGYSTSHKGYKCLAANGRL 429
Query: 503 FISKDVLFNETNFPYVRLFPVTSSPTANTYFTLP-PLQMPNQPPSTAT 363
+ISKDV+FNE FPY LF + SPT + T+ PL + N P +T++
Sbjct: 430 YISKDVIFNEVKFPYKTLF--SPSPTHASQDTVTIPLTVTNSPANTSS 475
>ref|XP_014632953.1| PREDICTED: uncharacterized protein LOC102666325 [Glycine max]
Length = 608
Score = 218 bits (556), Expect = 4e-63
Identities = 98/146 (67%), Positives = 121/146 (82%), Gaps = 1/146 (0%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHIV+MGLSLLS +S+P YWDHAFHTAVY+INRLP+ + IP
Sbjct: 451 PHTHHQNGVVERKHRHIVEMGLSLLSHSSLPYHYWDHAFHTAVYIINRLPAS-HNHCIPL 509
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDS-TGR 507
L+N PDYNFL+ FGC+C+PLL PY++ KFQ+R+ ECIF+GYS+SH+GYKCLD+ +GR
Sbjct: 510 KVLFNNVPDYNFLRAFGCACYPLLTPYNNPKFQYRSKECIFMGYSTSHRGYKCLDNKSGR 569
Query: 506 MFISKDVLFNETNFPYVRLFPVTSSP 429
++ISKDVLFNE +FPY P T SP
Sbjct: 570 IYISKDVLFNEKHFPYQITPPTTCSP 595
>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 839
Score = 222 bits (566), Expect = 4e-63
Identities = 103/168 (61%), Positives = 133/168 (79%), Gaps = 1/168 (0%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHIV++GL+LL+QA +P+ +WD+AF T+VYLINRLPS + +P+
Sbjct: 301 PHTHHQNGVVERKHRHIVELGLTLLAQAHLPMHFWDYAFLTSVYLINRLPSSSIQQDVPF 360
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
L++ PDYNFL+VFGCSCFP LRPY+ TK QFR+ EC+FLGYS+SHKGYKCL +GR+
Sbjct: 361 RKLFHHLPDYNFLRVFGCSCFPHLRPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRV 420
Query: 503 FISKDVLFNETNFPYVRLF-PVTSSPTANTYFTLPPLQMPNQPPSTAT 363
FISKDV+F E FPY LF P T SP++++ T+P + Q P T+T
Sbjct: 421 FISKDVIFCENRFPYPTLFSPSTPSPSSSS-ITVPLVVTNPQAPITST 467
Score = 67.0 bits (162), Expect = 1e-08
Identities = 34/54 (62%), Positives = 37/54 (68%)
Frame = -1
Query: 164 PQNTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
P N HPM TRAK GIV+PRL PTLLLT EP QAL S W AM+ EY+AL
Sbjct: 508 PINLHPMTTRAKAGIVKPRLQPTLLLTHFEPKNTKQALASDTWLAAMKQEYNAL 561
>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1268
Score = 224 bits (571), Expect = 8e-63
Identities = 102/169 (60%), Positives = 132/169 (78%), Gaps = 2/169 (1%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHIVD+G++LL AS+P+ +WD+AF TAVYLINRLP+ IP+
Sbjct: 569 PHTHHQNGVVERKHRHIVDIGITLLHHASLPLTFWDYAFSTAVYLINRLPTASLNFDIPF 628
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
+ L+ +TPDY FLK FGC+CFP LRPY + K FR+ EC+FLGYS+SHKGYKCL ++G++
Sbjct: 629 TVLFKQTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKI 688
Query: 503 FISKDVLFNETNFPYVRLFPVTSS--PTANTYFTLPPLQMPNQPPSTAT 363
+ISKDV+FNET FPY+ LF TS+ P+ + YFTL P P +TA+
Sbjct: 689 YISKDVIFNETRFPYLDLFQHTSTPVPSPSQYFTLNPDLSPPCSHTTAS 737
>dbj|GAU34785.1| hypothetical protein TSUD_205890 [Trifolium subterraneum]
Length = 888
Score = 221 bits (563), Expect = 2e-62
Identities = 98/159 (61%), Positives = 125/159 (78%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRH+VD+GL+LLSQA++P+ YWDH+F TAV+LINRLP+ IPY
Sbjct: 519 PHTHHQNGVVERKHRHVVDLGLTLLSQANLPLTYWDHSFLTAVHLINRLPTASLNFKIPY 578
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
+ L++K PD+N KVFG +CFPLLRPY+S KF FR+ ECIFLGYS++HKGYKCL TGR+
Sbjct: 579 TTLFHKDPDFNSFKVFGAACFPLLRPYNSHKFDFRSHECIFLGYSTTHKGYKCLSPTGRI 638
Query: 503 FISKDVLFNETNFPYVRLFPVTSSPTANTYFTLPPLQMP 387
++SKDV+FNE FPY LFP +S + +P +P
Sbjct: 639 YVSKDVIFNEQRFPYKILFPTQTSSLSTPIQDVPLSTLP 677
Score = 63.2 bits (152), Expect = 2e-07
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = -1
Query: 158 NTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
N HPM TRAK GI P+ PTLLLT EP TV QAL P W AM E++AL
Sbjct: 726 NNHPMKTRAKSGISLPKPPPTLLLTHTEPRTVKQALQDPKWLSAMTTEFEAL 777
>dbj|GAU48593.1| hypothetical protein TSUD_179750 [Trifolium subterraneum]
Length = 1364
Score = 223 bits (568), Expect = 2e-62
Identities = 105/171 (61%), Positives = 131/171 (76%), Gaps = 4/171 (2%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNG++ERKHRHIV+ GL+LLSQA++P+K+WDHAF TA +LINRL +P N PY
Sbjct: 579 PHTHHQNGLVERKHRHIVETGLTLLSQANIPLKFWDHAFITATFLINRLLTPVLNNNSPY 638
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
L +K PDY LKVFGC+CFP LRPYH+TK +R+ EC+FLGYSS +KGYKCL GR+
Sbjct: 639 YALLHKYPDYKSLKVFGCACFPFLRPYHTTKLAYRSQECVFLGYSSVYKGYKCLSPEGRI 698
Query: 503 FISKDVLFNETNFPYVRLFPVTS---SPTANTYFTLP-PLQMPNQPPSTAT 363
+ISKDVLFNE FPY +LFP +S SP+ + + P PL +P+QP T T
Sbjct: 699 YISKDVLFNEQKFPYSQLFPSSSLGPSPSGTSSQSSPIPLIIPSQPIPTPT 749
>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1279
Score = 223 bits (567), Expect = 3e-62
Identities = 104/170 (61%), Positives = 130/170 (76%), Gaps = 2/170 (1%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHIV++GL+LL AS+P+K+WD AF TAVYLINRLPS +P+
Sbjct: 513 PHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPF 572
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
+ L+NK+PDY FL+ FGC+CFP LRPY S K FR+ EC+FLGYS+SHKGYKCL S+GR+
Sbjct: 573 TTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSGRI 632
Query: 503 FISKDVLFNETNFPYVRLF--PVTSSPTANTYFTLPPLQMPNQPPSTATV 360
+ISKDV+FNE FPY LF +T + + YF L P P P +T+TV
Sbjct: 633 YISKDVIFNEHRFPYTDLFQPSLTQNVSPCQYFNLNPDLSP--PCTTSTV 680
Score = 67.0 bits (162), Expect = 1e-08
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = -1
Query: 158 NTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
N HPM TR+K G PR+HP+L L +EP TV QAL P+W AMQ EY+AL
Sbjct: 737 NNHPMQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNAL 788
>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1358
Score = 223 bits (567), Expect = 3e-62
Identities = 104/170 (61%), Positives = 130/170 (76%), Gaps = 2/170 (1%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRHIV++GL+LL AS+P+K+WD AF TAVYLINRLPS +P+
Sbjct: 592 PHTHHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPF 651
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
+ L+NK+PDY FL+ FGC+CFP LRPY S K FR+ EC+FLGYS+SHKGYKCL S+GR+
Sbjct: 652 TTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSGRI 711
Query: 503 FISKDVLFNETNFPYVRLF--PVTSSPTANTYFTLPPLQMPNQPPSTATV 360
+ISKDV+FNE FPY LF +T + + YF L P P P +T+TV
Sbjct: 712 YISKDVIFNEHRFPYTDLFQPSLTQNVSPCQYFNLNPDLSP--PCTTSTV 759
Score = 67.0 bits (162), Expect = 1e-08
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = -1
Query: 158 NTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
N HPM TR+K G PR+HP+L L +EP TV QAL P+W AMQ EY+AL
Sbjct: 816 NNHPMQTRSKSGFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNAL 867
>dbj|GAU28846.1| hypothetical protein TSUD_21830 [Trifolium subterraneum]
Length = 1496
Score = 222 bits (565), Expect = 5e-62
Identities = 101/165 (61%), Positives = 123/165 (74%), Gaps = 4/165 (2%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNG++ERKHRH+V+ GL+LLSQA +P+KYWDHAF TA +LINRLP+P +N PY
Sbjct: 702 PHTHHQNGLVERKHRHLVETGLTLLSQAQLPLKYWDHAFITAAFLINRLPTPILQNHSPY 761
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
L +K PDY LKVFGC+CFP LRPYHSTK +R+ ECIFLGYS+ +KGYKCL G +
Sbjct: 762 FTLLHKHPDYKALKVFGCACFPFLRPYHSTKLAYRSKECIFLGYSAMYKGYKCLSPDGHV 821
Query: 503 FISKDVLFNETNFPYVRLFPVTSSPTANTYFTLP----PLQMPNQ 381
++SKDVLFNE FPY LF TS+ + P PL +PNQ
Sbjct: 822 YVSKDVLFNEHKFPYPLLFSTTSTSKSPILSPTPMSQVPLHLPNQ 866
>gb|PNX91972.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1516
Score = 221 bits (563), Expect = 1e-61
Identities = 102/171 (59%), Positives = 131/171 (76%), Gaps = 4/171 (2%)
Frame = -1
Query: 863 PHTHHQNGVIERKHRHIVDMGLSLLSQASMPIKYWDHAFHTAVYLINRLPSPFQKNTIPY 684
PHTHHQNGV+ERKHRH+VD+GL+LLSQA++P+KYWDHAF TAV+LINRLP+ + IPY
Sbjct: 743 PHTHHQNGVVERKHRHVVDLGLTLLSQANLPLKYWDHAFLTAVHLINRLPTASLQFKIPY 802
Query: 683 SNLYNKTPDYNFLKVFGCSCFPLLRPYHSTKFQFRTAECIFLGYSSSHKGYKCLDSTGRM 504
+ L+NK+P++ KVFG +CFPLLRPY++ KF R+ ECIFLGYS++HKGYKCL TGR+
Sbjct: 803 TILFNKSPEFTSFKVFGSACFPLLRPYNAHKFDVRSHECIFLGYSNTHKGYKCLSPTGRI 862
Query: 503 FISKDVLFNETNFPYVRLFPVTSSPTANTYFTLP----PLQMPNQPPSTAT 363
F+SKDVLFNE FPY LF S ++ +P P+ + NQ +T T
Sbjct: 863 FVSKDVLFNEHRFPYKSLFSTQDSALSDITLDVPISTLPISIQNQTITTNT 913
Score = 61.2 bits (147), Expect = 1e-06
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = -1
Query: 164 PQNTHPMMTRAKHGIVQPRLHPTLLLTTAEPYTVSQALTSPHWREAMQVEYDAL 3
P N H M TRAK GI+ PR++P LLLT EP TV QAL P W AM E++AL
Sbjct: 972 PTNNHRMQTRAKSGII-PRINPKLLLTHTEPRTVKQALQDPKWLTAMTEEFEAL 1024