BLASTX nr result
ID: Astragalus22_contig00025623
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus22_contig00025623
(415 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo... 140 7e-36
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo... 140 1e-35
dbj|GAU36893.1| hypothetical protein TSUD_220620 [Trifolium subt... 139 2e-35
gb|PNX93770.1| histone deacetylase [Trifolium pratense] 139 2e-35
gb|PNX93094.1| histone deacetylase, partial [Trifolium pratense] 139 2e-35
gb|PNX92906.1| retrovirus-related Pol polyprotein from transposo... 138 3e-35
gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense] 138 5e-35
dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subt... 135 3e-34
dbj|GAU37351.1| hypothetical protein TSUD_395330 [Trifolium subt... 134 1e-33
gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense] 134 1e-33
gb|PNY10806.1| histone deacetylase [Trifolium pratense] 134 1e-33
dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subte... 133 2e-33
dbj|GAU26016.1| hypothetical protein TSUD_64040 [Trifolium subte... 132 5e-33
gb|PNX94499.1| retrovirus-related Pol polyprotein from transposo... 132 5e-33
gb|PNX99033.1| retrovirus-related Pol polyprotein from transposo... 132 7e-33
gb|PNX99662.1| retrovirus-related Pol polyprotein from transposo... 131 1e-32
gb|PNX89511.1| retrovirus-related Pol polyprotein from transposo... 127 2e-32
gb|PNY02741.1| retrovirus-related Pol polyprotein from transposo... 129 4e-32
gb|PNY02599.1| retrovirus-related Pol polyprotein from transposo... 129 6e-32
ref|XP_012467229.1| PREDICTED: uncharacterized protein LOC105785... 121 1e-31
>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1417
Score = 140 bits (353), Expect = 7e-36
Identities = 73/143 (51%), Positives = 94/143 (65%), Gaps = 8/143 (5%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LINRLP+ +P F SPY ALH++ DY+ ++ FGC CFP L PYN +KLQ+ S
Sbjct: 686 FTQAVYLINRLPSSAIPLFQSPYHALHQSQPDYSQIKVFGCLCFPHLRPYNNHKLQYRSS 745
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSF--------IL 337
+ LG SP HKG KC + GRIYIS+DVIFHE+ FPY +LF+ +SNS IL
Sbjct: 746 PCVYLGVSPQHKGHKCLDATGRIYISKDVIFHESQFPYLSLFASSSSNSHMSHTYPAQIL 805
Query: 338 PKSSNTSLPIAAAHTQNVSSPDT 406
S NT+ + H + S+PDT
Sbjct: 806 FPSVNTNTNL---HPETSSAPDT 825
>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1417
Score = 140 bits (352), Expect = 1e-35
Identities = 73/143 (51%), Positives = 94/143 (65%), Gaps = 8/143 (5%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LINRLP+ +P F SPY ALH++ DY+ ++ FGC CFP L PYN +KLQ+ S
Sbjct: 686 FTQAVYLINRLPSSAIPLFQSPYHALHQSQPDYSQIKVFGCLCFPHLRPYNNHKLQYKSS 745
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSF--------IL 337
+ LG SP HKG KC + GRIYIS+DVIFHE+ FPY +LF+ +SNS IL
Sbjct: 746 PCVYLGVSPQHKGHKCLDATGRIYISKDVIFHESQFPYLSLFASSSSNSHMSHTYPAQIL 805
Query: 338 PKSSNTSLPIAAAHTQNVSSPDT 406
S NT+ + H + S+PDT
Sbjct: 806 FPSVNTNTNL---HPETSSAPDT 825
>dbj|GAU36893.1| hypothetical protein TSUD_220620 [Trifolium subterraneum]
Length = 1263
Score = 139 bits (350), Expect = 2e-35
Identities = 67/117 (57%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LIN+LP+ +P F SP+ L+KT DY+ ++ FGC CFP L PYNK+KLQF S
Sbjct: 524 FTQAVYLINKLPSSVIPQFHSPHHGLYKTDPDYSLIKVFGCLCFPHLRPYNKHKLQFRSS 583
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSP-PTSNSFILPKSS 349
+ LG SPHHKG KC + GRIYIS+DV+FHE FPY ++FSP PTS S + SS
Sbjct: 584 PCVYLGVSPHHKGHKCLDAQGRIYISKDVVFHEFKFPYLSMFSPDPTSTSTLHASSS 640
>gb|PNX93770.1| histone deacetylase [Trifolium pratense]
Length = 1453
Score = 139 bits (350), Expect = 2e-35
Identities = 71/133 (53%), Positives = 89/133 (66%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LIN+LP LPSF SP+ L T DY+ ++ FGC CFP L PYNKNKLQF S+
Sbjct: 730 FTQAVYLINKLPTSALPSFKSPHHTLFNTQPDYSQVKIFGCLCFPHLRPYNKNKLQFRSN 789
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFILPKSSNTSL 361
I LG SP HKG KC +NGRIY+S+DVIFHET FPY +LF PTS++ SN+
Sbjct: 790 PCIYLGVSPQHKGHKCLDANGRIYVSKDVIFHETQFPYLSLF--PTSST----SCSNSEN 843
Query: 362 PIAAAHTQNVSSP 400
+ +T + +P
Sbjct: 844 CLTQTYTSDTPTP 856
>gb|PNX93094.1| histone deacetylase, partial [Trifolium pratense]
Length = 1513
Score = 139 bits (350), Expect = 2e-35
Identities = 72/135 (53%), Positives = 88/135 (65%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LIN+LP+ LPSF SP+ AL K+ DY L+ FGC CFP L PYNKNKLQF S
Sbjct: 801 FTQAVYLINKLPSSALPSFKSPHLALFKSQPDYTLLKVFGCLCFPHLRPYNKNKLQFRSS 860
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFILPKSSNTSL 361
+ LG SP HKG KC +GRIY+S+DVIFHE+ FPYPT+FS S ++S+ +
Sbjct: 861 PCVYLGVSPQHKGHKCLDEHGRIYVSKDVIFHESQFPYPTMFSISAS------QNSSENQ 914
Query: 362 PIAAAHTQNVSSPDT 406
P S PDT
Sbjct: 915 PEQNNQPLYTSKPDT 929
>gb|PNX92906.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1196
Score = 138 bits (348), Expect = 3e-35
Identities = 73/132 (55%), Positives = 89/132 (67%), Gaps = 6/132 (4%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LIN+LP L SF SP+ AL T DY+ L+ FGC CFP L PYN +KLQF S+
Sbjct: 475 FTQAVYLINKLPTSALTSFKSPHHALFNTQPDYSQLKIFGCLCFPHLRPYNNHKLQFRSN 534
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLF---SPPTSNSFILP---K 343
+ LG SP HKG KC +NGRIY+S+DVIFHET FPY +LF S SNS P
Sbjct: 535 PCVYLGVSPQHKGHKCLDANGRIYVSKDVIFHETQFPYLSLFPASSTSCSNSENYPTHDH 594
Query: 344 SSNTSLPIAAAH 379
+S+T+LPI + H
Sbjct: 595 TSDTTLPINSTH 606
>gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense]
Length = 1438
Score = 138 bits (347), Expect = 5e-35
Identities = 68/134 (50%), Positives = 91/134 (67%), Gaps = 5/134 (3%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LIN+LP LP++ISP++AL K+ DY+ ++ FGC CFP + PYNK+KLQF S
Sbjct: 730 FTQAVYLINKLPTSALPTYISPHKALFKSQPDYSQIKVFGCLCFPHMRPYNKHKLQFRSS 789
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFILPK-----S 346
+ LG SP HKG KC +G+IY+S+DV+FHE+ FPY +LF T+NS + S
Sbjct: 790 PCVYLGVSPQHKGHKCLDEHGKIYVSKDVVFHESQFPYFSLFPKSTTNSNMSDNTSTLFS 849
Query: 347 SNTSLPIAAAHTQN 388
S TSLP +A N
Sbjct: 850 STTSLPNPSADITN 863
>dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subterraneum]
Length = 1433
Score = 135 bits (341), Expect = 3e-34
Identities = 63/108 (58%), Positives = 78/108 (72%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AVHLIN+LP+ LPSF SP+ L T +Y +L+ FGC CFP L PYNKNK+QF S
Sbjct: 729 FTQAVHLINKLPSSALPSFKSPHHLLFNTCPEYTNLKVFGCLCFPHLRPYNKNKIQFRSS 788
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSN 325
+ LG SP HKG KC +NG+IY+S+DV FHE++FPY TLFS S+
Sbjct: 789 PCVYLGVSPQHKGHKCLDTNGKIYVSKDVTFHESNFPYTTLFSSDLSS 836
>dbj|GAU37351.1| hypothetical protein TSUD_395330 [Trifolium subterraneum]
Length = 1216
Score = 134 bits (336), Expect = 1e-33
Identities = 65/130 (50%), Positives = 90/130 (69%), Gaps = 9/130 (6%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT +VHLIN+LP+ L +F SP++AL+ T DY L+SFGC CFP L PYNK+KLQ+ S
Sbjct: 592 FTQSVHLINKLPSSALSNFQSPHQALYNTCPDYTQLKSFGCLCFPHLRPYNKHKLQYRSS 651
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFS-----PPTSNSF----I 334
+ LG SP HKG KC ++GRIYIS+DVIFHE+ +PY ++FS P ++S+ +
Sbjct: 652 PYVYLGISPQHKGHKCLDASGRIYISKDVIFHESKYPYQSMFSSSSQTPSNTSSYPAHIL 711
Query: 335 LPKSSNTSLP 364
P ++ +LP
Sbjct: 712 FPAHNDNTLP 721
>gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]
Length = 1418
Score = 134 bits (336), Expect = 1e-33
Identities = 67/124 (54%), Positives = 82/124 (66%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LINRLP+ LPSF SPY AL DY ++FGC CFP L PYNKNKLQ+ S
Sbjct: 729 FTQAVYLINRLPSSALPSFKSPYHALFNACPDYTQAKTFGCLCFPHLRPYNKNKLQYRSS 788
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFILPKSSNTSL 361
I LG SP HKG KC +GRIY+S+DV F+E+ FPY TLF P S++ ++ T
Sbjct: 789 PCIYLGISPQHKGHKCLDEHGRIYVSKDVSFYESQFPYTTLF-PTNSDNLSTHSNNPTPS 847
Query: 362 PIAA 373
P+ A
Sbjct: 848 PLLA 851
>gb|PNY10806.1| histone deacetylase [Trifolium pratense]
Length = 1441
Score = 134 bits (336), Expect = 1e-33
Identities = 64/109 (58%), Positives = 78/109 (71%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FTTAV L+NRLP +L F SPY AL+ DY+S++ FGCTCFP L PYN +KL F S
Sbjct: 704 FTTAVFLLNRLPTASLHHFTSPYHALYNKIPDYSSIKGFGCTCFPHLRPYNSHKLDFRST 763
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNS 328
+ LG SPHHKG+KC S +GR+YIS+DV+F+E FPY LF P TS S
Sbjct: 764 KCVYLGPSPHHKGYKCLSPDGRVYISKDVVFNELEFPYSILF-PNTSRS 811
>dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subterraneum]
Length = 1432
Score = 133 bits (335), Expect = 2e-33
Identities = 68/138 (49%), Positives = 88/138 (63%), Gaps = 6/138 (4%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AVHLIN+LP+ LPSF SP+ L DY+ L+ FGC CFP L PYNKNKLQF S
Sbjct: 729 FTQAVHLINKLPSSALPSFKSPHHMLFNVCPDYSQLKVFGCLCFPHLRPYNKNKLQFRSS 788
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFILPKSS---- 349
LG SP HKG KC + G+IY+S+DVIFHE++FP+ TL P S+S + P ++
Sbjct: 789 PCTYLGISPQHKGHKCLDAQGKIYVSKDVIFHESNFPFTTLV-PSASSSQVDPSNASPSQ 847
Query: 350 --NTSLPIAAAHTQNVSS 397
NT+ P+ ++ S
Sbjct: 848 EPNTTSPLTVEQVNSIIS 865
>dbj|GAU26016.1| hypothetical protein TSUD_64040 [Trifolium subterraneum]
Length = 942
Score = 132 bits (332), Expect = 5e-33
Identities = 70/138 (50%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AVHLINRLP+ L SF SP+ L K DY +L+ FGC CFP L PYNK+KLQ+ S
Sbjct: 731 FTQAVHLINRLPSSALASFKSPHHLLFKNCPDYTNLKVFGCLCFPHLRPYNKHKLQYRSS 790
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLF----SPPTSNSFILPKSS 349
I LG SP HKG KC +NG+IY+S+DV FHE++FPY TLF S P S L
Sbjct: 791 PCIYLGVSPQHKGHKCLDANGKIYVSKDVTFHESNFPYTTLFPIVPSDPNQQSSPLTVEQ 850
Query: 350 NTSLPIAAAHTQNVSSPD 403
SL + + PD
Sbjct: 851 INSLISQPITSSQPTQPD 868
>gb|PNX94499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 1434
Score = 132 bits (332), Expect = 5e-33
Identities = 65/136 (47%), Positives = 87/136 (63%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LIN+LP L SF SP+ AL K+ DY+ ++ FGC CFP L PYNK+KLQF S
Sbjct: 770 FTQAVYLINKLPTSALSSFKSPHHALFKSQPDYSQVKVFGCLCFPHLRPYNKHKLQFRSS 829
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFILPKSSNTSL 361
+ LG SP HKG KC +GR+Y+S+DVIFHE+ FPY ++F ++N SS+
Sbjct: 830 PCVYLGVSPQHKGHKCLDEHGRVYVSKDVIFHESQFPYTSMFPNSSTNCSNFETSSDMLT 889
Query: 362 PIAAAHTQNVSSPDTI 409
+ T ++ P TI
Sbjct: 890 LTTNSPTNSIHPPFTI 905
>gb|PNX99033.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1101
Score = 132 bits (331), Expect = 7e-33
Identities = 65/132 (49%), Positives = 83/132 (62%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LINR+P+ +P F SPY AL+K+ DY ++ FGC CFP L PYNK+KLQF S
Sbjct: 724 FTQAVYLINRVPSSAIPQFNSPYHALYKSQPDYTQVKVFGCLCFPHLRPYNKHKLQFRSS 783
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFILPKSSNTSL 361
+ LG SP HKG KC + GRIY+S+DV+FHE FPY +LF +S L + +
Sbjct: 784 PCVYLGVSPQHKGHKCLDAEGRIYVSKDVVFHEFKFPYVSLFPSSEIDSNSLGSPAQLAF 843
Query: 362 PIAAAHTQNVSS 397
P T N S
Sbjct: 844 PHQIDITPNTLS 855
>gb|PNX99662.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 1046
Score = 131 bits (329), Expect = 1e-32
Identities = 63/122 (51%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FTTAVHL+N LP +L +FISPY+AL+ DY SLR FGC+CFP L PYN +KL+ S
Sbjct: 311 FTTAVHLLNYLPTASLRNFISPYQALYNQIPDYKSLRVFGCSCFPHLRPYNNHKLELRST 370
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTL-FSPPTSNSFILPKSSNTS 358
+ LG SP HKG+KC ++NGR+YIS+DV+F+E+ FP+ L S P S+S + ++
Sbjct: 371 KCVYLGPSPQHKGYKCMTANGRVYISKDVVFNESEFPFSLLCASAPGSSSTTFGPTYSSQ 430
Query: 359 LP 364
+P
Sbjct: 431 IP 432
>gb|PNX89511.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 430
Score = 127 bits (320), Expect = 2e-32
Identities = 65/120 (54%), Positives = 79/120 (65%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV+LIN+LP F SP+ AL KT DY+ L+ FGC CFP L PYNK+KLQ+ S
Sbjct: 20 FTQAVYLINKLPTSAFNHFKSPHHALFKTQPDYSQLKVFGCLCFPHLRPYNKHKLQYRSS 79
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFILPKSSNTSL 361
+ LG SP HKG KC GRIYIS+DVIFHE+ FPY ++F T+N P +S T L
Sbjct: 80 PCVYLGVSPQHKGHKCLDEQGRIYISKDVIFHESQFPYISMFPNSTTN----PDNSVTPL 135
>gb|PNY02741.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 1054
Score = 129 bits (325), Expect = 4e-32
Identities = 66/141 (46%), Positives = 90/141 (63%), Gaps = 10/141 (7%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FTTAV ++N+LP +LP++ SP+ ALH DY S+R FGC CFP L PYN +KL+F S
Sbjct: 428 FTTAVSVLNKLPTASLPNYSSPFYALHHYEPDYKSIRVFGCACFPHLRPYNNHKLEFRST 487
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFILPKS----- 346
LG SP HKG KC SS+GR+YIS+DV+F+ET FP+ +L S + S P
Sbjct: 488 KCTYLGPSPLHKGHKCMSSDGRVYISKDVVFNETEFPFSSLNSSSGTTSVSSPSHFPSVI 547
Query: 347 -----SNTSLPIAAAHTQNVS 394
NT LP++ + +++VS
Sbjct: 548 PTPFFPNTPLPVSVSLSESVS 568
>gb|PNY02599.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 956
Score = 129 bits (324), Expect = 6e-32
Identities = 66/140 (47%), Positives = 85/140 (60%), Gaps = 11/140 (7%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
FT AV LIN+LP+ +P F SP+ AL+KT DY+ ++ FGC CFP L PYN++K QF S
Sbjct: 666 FTQAVFLINKLPSSAIPQFSSPHHALYKTQPDYSQVKVFGCLCFPHLRPYNQHKFQFRSS 725
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFI--------- 334
+ LG SP HKG KC S GRIY+S+DV+FHE FPY +LF S S +
Sbjct: 726 PCVYLGVSPQHKGHKCLDSEGRIYVSKDVVFHEFKFPYLSLFPNSASTSTLHNSMSYPAQ 785
Query: 335 --LPKSSNTSLPIAAAHTQN 388
P ++ S P A + T N
Sbjct: 786 IKFPLQTHASSPPANSTTAN 805
>ref|XP_012467229.1| PREDICTED: uncharacterized protein LOC105785653 [Gossypium
raimondii]
Length = 227
Score = 121 bits (304), Expect = 1e-31
Identities = 62/133 (46%), Positives = 88/133 (66%)
Frame = +2
Query: 2 FTTAVHLINRLPALTLPSFISPYEALHKTTLDYASLRSFGCTCFPLLTPYNKNKLQFHSH 181
F++A++LINRLP L FISPYE L +T +Y+ L++FGC CFP L PYNK+KL F S
Sbjct: 16 FSSAIYLINRLPTAPL-GFISPYEQLFQTKPNYSFLKTFGCLCFPNLRPYNKSKLHFRSS 74
Query: 182 *SINLGHSPHHKGFKC*SSNGRIYISRDVIFHETSFPYPTLFSPPTSNSFILPKSSNTSL 361
I LG+S +KG++C SNGR+Y+SR V FHE F + + + PT S P +++ L
Sbjct: 75 PCIFLGYSSLYKGYRCQDSNGRVYVSRHVTFHEDQFWFKEMHAKPTFMS--KPTHTSSKL 132
Query: 362 PIAAAHTQNVSSP 400
+ A + N++SP
Sbjct: 133 MVLAPNLTNITSP 145