BLASTX nr result

ID: Astragalus22_contig00025337 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00025337
         (438 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625380.1| cyclin-like F-box protein [Medicago truncatu...    62   2e-08
ref|XP_013450532.1| F-box/RNI/FBD-like domain protein [Medicago ...    56   2e-06

>ref|XP_003625380.1| cyclin-like F-box protein [Medicago truncatula]
 gb|AES81598.1| cyclin-like F-box protein [Medicago truncatula]
          Length = 391

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
 Frame = -3

Query: 421 NKSWKDPPLVPXXXXXXXXXXXXXXCNSMDSDQLQFAEYIVQNSKVLETMIIKTDRSLDM 242
           ++ WKDPP+VP                    D L+F +YI++NSKVLETM I + RSLDM
Sbjct: 308 DECWKDPPIVPECLSSQLKTCHIRVYKGTKYD-LEFTKYIMENSKVLETMTINSTRSLDM 366

Query: 241 ------LIKSSSWTKCSATCKLV 191
                 L+K SS+T+ S TCKL+
Sbjct: 367 NVKYQLLMKLSSYTRGSTTCKLL 389


>ref|XP_013450532.1| F-box/RNI/FBD-like domain protein [Medicago truncatula]
 gb|KEH24560.1| F-box/RNI/FBD-like domain protein [Medicago truncatula]
          Length = 399

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
 Frame = -3

Query: 415 SWKDPPLVPXXXXXXXXXXXXXXCNSMDSDQLQFAEYIVQNSKVLETMIIKTDRSLDMLI 236
           +W DP + P                  + + LQFA+YI+QNSKVL TM IK   S+D+ +
Sbjct: 321 NWMDPAITPECLSTQLRTCLLKGFKCTECE-LQFAKYIMQNSKVLNTMSIKIASSVDINV 379

Query: 235 ------KSSSWTKCSATCKL 194
                 KS+SWT+ S+TCKL
Sbjct: 380 KYQLSRKSASWTRASSTCKL 399


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