BLASTX nr result

ID: Astragalus22_contig00024421 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00024421
         (284 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXR35423.1| LPXTG-motif cell wall anchor domain protein, part...    54   2e-06

>gb|EXR35423.1| LPXTG-motif cell wall anchor domain protein, partial [Acinetobacter
           sp. 1294243]
          Length = 477

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 38/84 (45%), Positives = 57/84 (67%), Gaps = 10/84 (11%)
 Frame = -2

Query: 256 CQNLSYLKCLKSQSLNYQKLMSPNCQNPS-CLKSPNCQNLSYLKSLNY-QNPSYLKSL-N 86
           CQ+LS  +C + QSL++ + +S +CQNPS C    +CQN S+ +SL++ QNPS+ +SL +
Sbjct: 239 CQSLS--RC-RYQSLSHCQSLS-HCQNPSHCQSLSHCQNPSHCQSLSHCQNPSHCQSLSH 294

Query: 85  CQNPSYLKCLK-------CQSLSY 35
           CQNPS+ + L        CQSLS+
Sbjct: 295 CQNPSHCQSLSHCQNPSHCQSLSH 318


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