BLASTX nr result

ID: Astragalus22_contig00024155 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00024155
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017408696.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06
ref|XP_014510463.1| pentatricopeptide repeat-containing protein ...    56   3e-06
ref|XP_017408697.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06
gb|KOM32056.1| hypothetical protein LR48_Vigan01g161200 [Vigna a...    54   7e-06

>ref|XP_017408696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial isoform X1 [Vigna angularis]
          Length = 738

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = +3

Query: 27  GFCNFGNVSAVY*LFDEMTHKKIVPDFVAYTSMVSNCI*GIC 152
           GF   GNVSA Y LFDEM HKKIVPDFV YTSM++    G+C
Sbjct: 362 GFGKSGNVSAEYKLFDEMRHKKIVPDFVTYTSMIN----GLC 399


>ref|XP_014510463.1| pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial [Vigna radiata var. radiata]
          Length = 738

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = +3

Query: 27  GFCNFGNVSAVY*LFDEMTHKKIVPDFVAYTSMVSNCI*GIC 152
           GF   GNVSA Y LFDEM HKKIVPDFV YTSM++    G+C
Sbjct: 362 GFGKSGNVSAEYKLFDEMRHKKIVPDFVTYTSMIN----GLC 399


>ref|XP_017408697.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial isoform X2 [Vigna angularis]
 ref|XP_017408698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial isoform X2 [Vigna angularis]
 gb|KOM28208.1| hypothetical protein LR48_Vigan511s003100 [Vigna angularis]
          Length = 738

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = +3

Query: 27  GFCNFGNVSAVY*LFDEMTHKKIVPDFVAYTSMVSNCI*GIC 152
           GF   GNVSA Y LFDEM HKKIVPDFV YTSM++    G+C
Sbjct: 362 GFGKSGNVSAEYKLFDEMRHKKIVPDFVTYTSMIN----GLC 399


>gb|KOM32056.1| hypothetical protein LR48_Vigan01g161200 [Vigna angularis]
          Length = 301

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 29/52 (55%), Positives = 35/52 (67%)
 Frame = +3

Query: 30  FCNFGNVSAVY*LFDEMTHKKIVPDFVAYTSMVSNCI*GICLSHYTILSTCL 185
           F   GNVSA Y LFDEM HKKIVPDFV YTSM++    G+C +   ++  CL
Sbjct: 97  FDKSGNVSAEYYLFDEMRHKKIVPDFVTYTSMIN----GLCEAR-KVVGACL 143


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