BLASTX nr result
ID: Astragalus22_contig00021937
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus22_contig00021937
(378 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX91021.1| retrovirus-related Pol polyprotein from transposo... 124 3e-34
dbj|GAU34818.1| hypothetical protein TSUD_394440 [Trifolium subt... 125 3e-34
gb|PNX57709.1| retrovirus-related Pol polyprotein from transposo... 127 8e-34
gb|PNX56029.1| retrovirus-related Pol polyprotein from transposo... 127 8e-34
gb|PNX69613.1| retrovirus-related Pol polyprotein from transposo... 121 7e-33
dbj|GAU44321.1| hypothetical protein TSUD_305020 [Trifolium subt... 127 3e-32
dbj|GAU39478.1| hypothetical protein TSUD_159100 [Trifolium subt... 128 9e-32
gb|PNX82441.1| retrovirus-related Pol polyprotein from transposo... 127 9e-32
dbj|GAU20748.1| hypothetical protein TSUD_231620 [Trifolium subt... 123 1e-31
gb|PNX91563.1| retrovirus-related Pol polyprotein from transposo... 120 2e-31
gb|PNX63176.1| retrovirus-related Pol polyprotein from transposo... 121 2e-31
gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense] 127 2e-31
gb|PNX90878.1| retrovirus-related Pol polyprotein from transposo... 122 3e-31
gb|PNX63257.1| retrovirus-related Pol polyprotein from transposo... 120 3e-31
gb|PNX94499.1| retrovirus-related Pol polyprotein from transposo... 126 4e-31
gb|PNX93770.1| histone deacetylase [Trifolium pratense] 126 4e-31
dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subte... 125 1e-30
gb|PNX90864.1| retrovirus-related Pol polyprotein from transposo... 122 1e-30
gb|PNX89801.1| retrovirus-related Pol polyprotein from transposo... 122 1e-30
gb|PNX79340.1| retrovirus-related Pol polyprotein from transposo... 124 1e-30
>gb|PNX91021.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 121
Score = 124 bits (311), Expect = 3e-34
Identities = 55/88 (62%), Positives = 74/88 (84%)
Frame = +2
Query: 95 LSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED*LNWHYSDKYEKWLVQ 274
L+IKL+DKNFLLW+QQV GV+T+H LHR +++P+IP QF T D L+ SD+Y++WL +
Sbjct: 34 LTIKLDDKNFLLWSQQVNGVITAHNLHRFVVNPQIPLQFATVADRLDGKNSDEYQQWLFK 93
Query: 275 DQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
DQTLF WLLST+SD VLPR+LSCKH+++
Sbjct: 94 DQTLFTWLLSTISDGVLPRVLSCKHSYE 121
>dbj|GAU34818.1| hypothetical protein TSUD_394440 [Trifolium subterraneum]
Length = 172
Score = 125 bits (315), Expect = 3e-34
Identities = 59/108 (54%), Positives = 79/108 (73%), Gaps = 2/108 (1%)
Frame = +2
Query: 53 LPSNT--SLAFSTASKLSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED 226
LP+ T S L+IKL++KNFLLW+QQV GV+T+H LHR +++PEIP QF T D
Sbjct: 21 LPNTTKESSKSGLTHSLTIKLDEKNFLLWSQQVNGVITAHNLHRFIVNPEIPLQFATVAD 80
Query: 227 *LNWHYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHAHQDLRR 370
++ SD+Y KW+ +DQTLF WLLST+SD VLPR++ CKHAH+ L +
Sbjct: 81 RIDGKTSDEYRKWIFKDQTLFTWLLSTISDAVLPRVVHCKHAHEVLSK 128
>gb|PNX57709.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 242
Score = 127 bits (318), Expect = 8e-34
Identities = 59/104 (56%), Positives = 80/104 (76%), Gaps = 2/104 (1%)
Frame = +2
Query: 53 LPSNT--SLAFSTASKLSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED 226
LPS T S L+IKL++KN+LLWNQQV GV+T+H LHR +++PEIP Q+T+ D
Sbjct: 20 LPSTTKGSSKSGLTHSLTIKLDEKNYLLWNQQVNGVITAHNLHRFVVNPEIPLQYTSVAD 79
Query: 227 *LNWHYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
L+ SD+Y++WL +DQTLF WLLST+SD VLPR+L+CKH+H+
Sbjct: 80 RLDGKNSDEYQRWLFKDQTLFTWLLSTISDGVLPRVLNCKHSHE 123
>gb|PNX56029.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 242
Score = 127 bits (318), Expect = 8e-34
Identities = 59/104 (56%), Positives = 80/104 (76%), Gaps = 2/104 (1%)
Frame = +2
Query: 53 LPSNT--SLAFSTASKLSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED 226
LPS T S L+IKL++KN+LLWNQQV GV+T+H LHR +++PEIP Q+T+ D
Sbjct: 20 LPSTTKGSSKSGLTHSLTIKLDEKNYLLWNQQVNGVITAHNLHRFVVNPEIPLQYTSVAD 79
Query: 227 *LNWHYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
L+ SD+Y++WL +DQTLF WLLST+SD VLPR+L+CKH+H+
Sbjct: 80 RLDGKNSDEYQRWLFKDQTLFTWLLSTISDGVLPRVLNCKHSHE 123
>gb|PNX69613.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 144
Score = 121 bits (304), Expect = 7e-33
Identities = 51/87 (58%), Positives = 73/87 (83%)
Frame = +2
Query: 95 LSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED*LNWHYSDKYEKWLVQ 274
L+IKL++KN+LLWNQQV GV+T+H LH+ +++P+IP QF + D L+ +S++Y+KWL +
Sbjct: 58 LTIKLDEKNYLLWNQQVNGVITAHNLHKFVVNPDIPLQFASVTDRLDGKFSEEYQKWLFK 117
Query: 275 DQTLFIWLLSTLSDMVLPRLLSCKHAH 355
DQ+LF WLLST+SD VLPR+L CKH+H
Sbjct: 118 DQSLFTWLLSTISDAVLPRVLHCKHSH 144
>dbj|GAU44321.1| hypothetical protein TSUD_305020 [Trifolium subterraneum]
Length = 468
Score = 127 bits (319), Expect = 3e-32
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
Frame = +2
Query: 38 FNHGGLPSNT--SLAFSTASKLSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQF 211
F LP+ T S L+IKL++KNFLLW+QQ+ GV+T+H LHR +++PEIP QF
Sbjct: 240 FTAANLPTTTKDSTKSGLTHSLTIKLDEKNFLLWSQQINGVITTHNLHRFVVNPEIPLQF 299
Query: 212 TTNED*LNWHYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
+ D LN S++Y+KWL DQTLF WLLST+SD +LPR+L CKHAH+
Sbjct: 300 ASVNDRLNGKISEEYQKWLFIDQTLFTWLLSTISDSILPRVLHCKHAHE 348
>dbj|GAU39478.1| hypothetical protein TSUD_159100 [Trifolium subterraneum]
Length = 1143
Score = 128 bits (321), Expect = 9e-32
Identities = 61/106 (57%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
Frame = +2
Query: 53 LPSNT--SLAFSTASKLSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED 226
LP+ T S L+IKL++KNFLLW+QQV GV+T+H LHR +++PEIP QF T D
Sbjct: 21 LPNTTKDSSKSGLTHSLTIKLDEKNFLLWSQQVNGVITTHNLHRFVVNPEIPLQFVTVAD 80
Query: 227 *LNWHYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHAHQDL 364
L+ SD+Y+KWL +DQTLF WLLST+SD VLPR++ CKHAH+ L
Sbjct: 81 RLDGKTSDEYQKWLFKDQTLFTWLLSTISDSVLPRVVHCKHAHEGL 126
>gb|PNX82441.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 537
Score = 127 bits (318), Expect = 9e-32
Identities = 59/104 (56%), Positives = 80/104 (76%), Gaps = 2/104 (1%)
Frame = +2
Query: 53 LPSNT--SLAFSTASKLSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED 226
LPS T S L+IKL++KN+LLWNQQV GV+T+H LHR +++PEIP Q+T+ D
Sbjct: 2 LPSTTKGSSKSGLTHSLTIKLDEKNYLLWNQQVNGVITAHNLHRFVVNPEIPLQYTSVAD 61
Query: 227 *LNWHYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
L+ SD+Y++WL +DQTLF WLLST+SD VLPR+L+CKH+H+
Sbjct: 62 RLDGKNSDEYQRWLFKDQTLFTWLLSTISDGVLPRVLNCKHSHE 105
>dbj|GAU20748.1| hypothetical protein TSUD_231620 [Trifolium subterraneum]
Length = 327
Score = 123 bits (309), Expect = 1e-31
Identities = 57/104 (54%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
Frame = +2
Query: 53 LPSNT--SLAFSTASKLSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED 226
LP+ T S L+IKL++KNFL W+QQV GV+T+H LHR +++PEIP QF T D
Sbjct: 21 LPNTTKESSKSGLTHSLTIKLDEKNFLSWSQQVNGVITAHNLHRFIVNPEIPLQFATVAD 80
Query: 227 *LNWHYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
++ SD+Y KW+ +DQTLF WLLST+SD+VLPR++ CKHAH+
Sbjct: 81 RIDGKTSDEYRKWIFKDQTLFTWLLSTISDVVLPRVVHCKHAHE 124
>gb|PNX91563.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 224
Score = 120 bits (301), Expect = 2e-31
Identities = 53/88 (60%), Positives = 71/88 (80%)
Frame = +2
Query: 95 LSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED*LNWHYSDKYEKWLVQ 274
L+IKL++ NFLLW+Q V GV+T+H LHR +++P+IP QF + ED SD Y++WLV+
Sbjct: 31 LTIKLDENNFLLWSQHVNGVITAHNLHRFVVNPQIPLQFASIEDRATTTNSDVYQQWLVK 90
Query: 275 DQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
DQTLF WLLSTLSD +LPR+LSC+HAH+
Sbjct: 91 DQTLFTWLLSTLSDGILPRVLSCRHAHE 118
>gb|PNX63176.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 273
Score = 121 bits (304), Expect = 2e-31
Identities = 59/108 (54%), Positives = 76/108 (70%)
Frame = +2
Query: 35 VFNHGGLPSNTSLAFSTASKLSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFT 214
VF +S A A KLSIKL++KNFLLW+QQVEGV+ SHKLHR +++P+IP ++
Sbjct: 30 VFAGSSSEGQSSTAVHFAPKLSIKLDEKNFLLWHQQVEGVIISHKLHRFVVNPQIPAKYD 89
Query: 215 TNED*LNWHYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
+ D S Y+KWLVQDQ LF WLLSTL++ VLPR +SC+HA Q
Sbjct: 90 SEADRELDEVSAAYDKWLVQDQMLFTWLLSTLAESVLPRTISCRHAFQ 137
>gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]
Length = 1418
Score = 127 bits (318), Expect = 2e-31
Identities = 56/88 (63%), Positives = 74/88 (84%)
Frame = +2
Query: 95 LSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED*LNWHYSDKYEKWLVQ 274
L+IKL+DKNFLLW+QQV GV+T+H LHR +++P+IP QF + D L+ S++Y+KWL +
Sbjct: 35 LTIKLDDKNFLLWSQQVNGVITAHNLHRFVVNPQIPLQFASVTDRLDGKNSEEYQKWLFK 94
Query: 275 DQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
DQTLF WLLST+SD VLPR+LSCKHAH+
Sbjct: 95 DQTLFTWLLSTMSDSVLPRVLSCKHAHE 122
>gb|PNX90878.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 324
Score = 122 bits (306), Expect = 3e-31
Identities = 54/88 (61%), Positives = 74/88 (84%)
Frame = +2
Query: 95 LSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED*LNWHYSDKYEKWLVQ 274
L+IKL++KNFLLW+QQV GV+T+H LHR +++PEIP QF + D L+ SD+Y+KWL +
Sbjct: 35 LTIKLDEKNFLLWSQQVNGVITAHNLHRFVVNPEIPLQFASVTDRLDGKNSDEYQKWLFK 94
Query: 275 DQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
DQ+LF WLLST+SD VLPR+LSCKH+++
Sbjct: 95 DQSLFTWLLSTISDGVLPRVLSCKHSYE 122
>gb|PNX63257.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 247
Score = 120 bits (301), Expect = 3e-31
Identities = 58/104 (55%), Positives = 74/104 (71%)
Frame = +2
Query: 47 GGLPSNTSLAFSTASKLSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED 226
G N S + A KLSIKL+DKNFLLWNQQVEGV+ S+KLHR +++PEIP ++ + D
Sbjct: 10 GSSSGNNSGVVNFAPKLSIKLDDKNFLLWNQQVEGVILSNKLHRFVVNPEIPAKYNSESD 69
Query: 227 *LNWHYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
S+ Y+KW+VQDQ LF WLLSTL++ VLPR + C HA Q
Sbjct: 70 RELDIVSEAYDKWIVQDQMLFTWLLSTLAESVLPRTIGCCHAFQ 113
>gb|PNX94499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 1434
Score = 126 bits (316), Expect = 4e-31
Identities = 56/88 (63%), Positives = 73/88 (82%)
Frame = +2
Query: 95 LSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED*LNWHYSDKYEKWLVQ 274
L+IKL++KNFLLWNQQV GV+T+H LHR +++PEIP Q+ + D L+ SD+Y+KWL +
Sbjct: 38 LTIKLDEKNFLLWNQQVNGVITAHNLHRFVVNPEIPLQYASVTDRLDGKSSDEYQKWLFK 97
Query: 275 DQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
DQTLF WLLST+SD VLPR+L CKHAH+
Sbjct: 98 DQTLFTWLLSTISDGVLPRVLHCKHAHE 125
>gb|PNX93770.1| histone deacetylase [Trifolium pratense]
Length = 1453
Score = 126 bits (316), Expect = 4e-31
Identities = 57/100 (57%), Positives = 76/100 (76%)
Frame = +2
Query: 59 SNTSLAFSTASKLSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED*LNW 238
S S L+IKL++KNFLLW+QQV GV+T+H LHR +++PEIP Q+ + D L+
Sbjct: 25 SKESTKSGLTHSLTIKLDEKNFLLWSQQVNGVITAHNLHRFVVNPEIPLQYASVTDRLDG 84
Query: 239 HYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
SD+Y+KWL +DQTLF WLLST+SD VLPR+L+CKHAH+
Sbjct: 85 KNSDEYQKWLFKDQTLFTWLLSTISDSVLPRVLNCKHAHE 124
>dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subterraneum]
Length = 1432
Score = 125 bits (313), Expect = 1e-30
Identities = 55/88 (62%), Positives = 72/88 (81%)
Frame = +2
Query: 95 LSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED*LNWHYSDKYEKWLVQ 274
L+IKL++KNFLLW+QQV GV+T+H LHR +++PEIP QF + D L+ SD+Y KWL +
Sbjct: 37 LTIKLDEKNFLLWSQQVNGVITTHNLHRFVVNPEIPLQFASVNDRLDGKISDEYRKWLFK 96
Query: 275 DQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
DQTLF WLLST+SD VLPR+L CKH+H+
Sbjct: 97 DQTLFTWLLSTISDSVLPRVLHCKHSHE 124
>gb|PNX90864.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 401
Score = 122 bits (306), Expect = 1e-30
Identities = 60/122 (49%), Positives = 88/122 (72%), Gaps = 4/122 (3%)
Frame = +2
Query: 5 TQSPSS*VVYVFNHG---GLPSNTSLAFSTAS-KLSIKLEDKNFLLWNQQVEGVVTSHKL 172
T +PS+ + + + G LP+ S + ++IKL++KNFLLW+QQV GV+T+H L
Sbjct: 2 TTTPSTDEIPIADSGIAIDLPNTKGSTKSALTHSITIKLDEKNFLLWSQQVNGVITAHNL 61
Query: 173 HRLLIDPEIPPQFTTNED*LNWHYSDKYEKWLVQDQTLFIWLLSTLSDMVLPRLLSCKHA 352
HR +++PEIP QF + D L+ SD+Y++WL +DQ+LF WLLST+SD VLPR+LSCKHA
Sbjct: 62 HRFVVNPEIPLQFASVADRLDGKTSDEYQRWLFKDQSLFTWLLSTISDNVLPRVLSCKHA 121
Query: 353 HQ 358
++
Sbjct: 122 YE 123
>gb|PNX89801.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 403
Score = 122 bits (306), Expect = 1e-30
Identities = 51/88 (57%), Positives = 74/88 (84%)
Frame = +2
Query: 95 LSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED*LNWHYSDKYEKWLVQ 274
L+IKL++KN+LLWNQQV GV+T+H LH+ +++P+IP QF + D L+ +S++Y+KWL +
Sbjct: 37 LTIKLDEKNYLLWNQQVNGVITAHNLHKFVVNPDIPLQFASVTDRLDGKFSEEYQKWLFK 96
Query: 275 DQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
DQ+LF WLLST+SD VLPR+L CKH+H+
Sbjct: 97 DQSLFTWLLSTISDAVLPRVLHCKHSHE 124
>gb|PNX79340.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 589
Score = 124 bits (311), Expect = 1e-30
Identities = 55/88 (62%), Positives = 74/88 (84%)
Frame = +2
Query: 95 LSIKLEDKNFLLWNQQVEGVVTSHKLHRLLIDPEIPPQFTTNED*LNWHYSDKYEKWLVQ 274
L+IKL+DKNFLLW+QQV GV+T+H LHR +++P+IP QF T D L+ SD+Y++WL +
Sbjct: 34 LTIKLDDKNFLLWSQQVNGVITAHNLHRFVVNPQIPLQFATVADRLDGKNSDEYQQWLFK 93
Query: 275 DQTLFIWLLSTLSDMVLPRLLSCKHAHQ 358
DQTLF WLLST+SD VLPR+LSCKH+++
Sbjct: 94 DQTLFTWLLSTISDGVLPRVLSCKHSYE 121