BLASTX nr result

ID: Astragalus22_contig00020949 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00020949
         (2403 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   508   e-169
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo...   502   e-166
ref|XP_014622404.1| PREDICTED: uncharacterized mitochondrial pro...   495   e-165
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo...   496   e-164
gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposo...   486   e-161
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   504   e-160
gb|KYP67562.1| Retrovirus-related Pol polyprotein from transposo...   484   e-160
gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposo...   486   e-160
gb|KYP51570.1| Retrovirus-related Pol polyprotein from transposo...   482   e-160
gb|PNX93473.1| retrovirus-related Pol polyprotein from transposo...   503   e-159
dbj|GAU31266.1| hypothetical protein TSUD_153410 [Trifolium subt...   493   e-159
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   504   e-157
gb|PNX95703.1| retrovirus-related Pol polyprotein from transposo...   491   e-157
gb|PNY08092.1| histone deacetylase [Trifolium pratense]               498   e-156
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   496   e-155
gb|KYP47651.1| Retrovirus-related Pol polyprotein from transposo...   473   e-155
gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]      499   e-155
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   496   e-155
gb|KYP63857.1| Retrovirus-related Pol polyprotein from transposo...   469   e-154
gb|PNX92571.1| histone deacetylase [Trifolium pratense]               496   e-154

>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 538

 Score =  508 bits (1308), Expect = e-169
 Identities = 250/364 (68%), Positives = 294/364 (80%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            V+KPVTIR ILTLAL+H W + Q+DVNNAFLNG L EEVYMSQP GFE+SDK+LVCKLHK
Sbjct: 109  VVKPVTIRLILTLALTHHWSIQQLDVNNAFLNGNLQEEVYMSQPPGFESSDKTLVCKLHK 168

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            AIYGLKQAPRAWF KLK+TL  L F  S+CDPSLFVY               +I+T  ++
Sbjct: 169  AIYGLKQAPRAWFDKLKTTLFQLNFQISKCDPSLFVYSHDNNVIYILVYVDDIIITGNNS 228

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
              +  +I +L+S FSLK LG LD+FLGIEVK  ++G+L LTQSKYIRDLL RTNM  +N 
Sbjct: 229  STLQNIIAQLNSAFSLKDLGRLDFFLGIEVKSNTDGSLTLTQSKYIRDLLNRTNMENSNP 288

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            ISSPMVS CKL++ GS+  LD   YRSVVGALQY TITRPEIS++VNKVCQ+M+ PLE H
Sbjct: 289  ISSPMVSGCKLSRTGSEKFLDVTLYRSVVGALQYATITRPEISFSVNKVCQFMSNPLEQH 348

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W+ VKRILRYLKGT+  GL LQPA  + PL +RA+CDADWASD DDR+STSGA++F+GPN
Sbjct: 349  WSAVKRILRYLKGTMFLGLHLQPAPSNSPLSIRAYCDADWASDPDDRRSTSGASIFVGPN 408

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            LISWW+KKQTVVARSSAEAEYRSLALATAEV W+Q+LL+EL +SH TP ++CDN S VAL
Sbjct: 409  LISWWSKKQTVVARSSAEAEYRSLALATAEVLWIQTLLSELHVSHHTPVVYCDNMSTVAL 468

Query: 14   AHNP 3
            AHNP
Sbjct: 469  AHNP 472


>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  502 bits (1292), Expect = e-166
 Identities = 246/364 (67%), Positives = 291/364 (79%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            +IKPVTIR ILTLA+S+ WD+HQ+DVNNAFLNG L E VYM QP GFE  D +LVCKL+K
Sbjct: 108  IIKPVTIRLILTLAISNHWDIHQLDVNNAFLNGSLNETVYMQQPPGFEVPDSTLVCKLNK 167

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            A+YGLKQAPR WF +L+ TLL  GF +S+CDPSLF Y               +I+T  S 
Sbjct: 168  ALYGLKQAPRQWFERLQYTLLQFGFKASKCDPSLFTYHMQSNIVYLLVYVDDIIITGNSF 227

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
                QLI +L+S+FSLKQLG LDYFLGIEV+ + NG++LLTQSKYIRDLL RTNM EAN+
Sbjct: 228  QFTQQLIDQLNSIFSLKQLGKLDYFLGIEVRHLQNGSVLLTQSKYIRDLLQRTNMLEANA 287

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            ISSPMVSSCKL+K GSD + D   YRSVVGALQY TITRPE+S+AVNKVCQ+MA PLE+H
Sbjct: 288  ISSPMVSSCKLSKHGSDTLADSTFYRSVVGALQYATITRPELSFAVNKVCQFMAHPLESH 347

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W  VKRILRYLKGT+ +GL LQPA + +P  L A+CDADWA+D DDR+STSGAA+FLGPN
Sbjct: 348  WNAVKRILRYLKGTMFYGLHLQPARVHQPFSLYAYCDADWAADPDDRRSTSGAAIFLGPN 407

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            LISWW++KQ VVARSS EAEYRSLA AT+EV W+Q+LL EL +  +TP I+CDNQS V+L
Sbjct: 408  LISWWSRKQPVVARSSTEAEYRSLAQATSEVLWIQTLLHELRVPFSTPTIYCDNQSTVSL 467

Query: 14   AHNP 3
            AHNP
Sbjct: 468  AHNP 471


>ref|XP_014622404.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Glycine max]
          Length = 443

 Score =  495 bits (1274), Expect = e-165
 Identities = 242/364 (66%), Positives = 293/364 (80%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKPVTIR ILTLALS+ W L Q+DVNNAFLN  L E V+M QP GFE  D+SLVCK +K
Sbjct: 12   VIKPVTIRIILTLALSYGWKLFQLDVNNAFLNRFLEETVFMKQPPGFEVIDRSLVCKFNK 71

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            AIYG KQAPR WF +LK TLL LGF SS+ D SLF+Y+              +ILT +S 
Sbjct: 72   AIYGSKQAPRQWFDRLKFTLLQLGFVSSKSDSSLFIYRHQLHTVYLLVYVDDIILTGSST 131

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             LI QL  +L++ FSLKQLG LD+FLG+E+K + N ++L+TQSKYIRDLL +TNMAEA+S
Sbjct: 132  SLIQQLTDKLNTAFSLKQLGHLDFFLGLEIKYLFNKSILMTQSKYIRDLLHKTNMAEAHS 191

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            ISSPMVS+CKL++ G+D   DP  YRSVVGALQY T+TRPEIS+ VNKVCQ+M APL++H
Sbjct: 192  ISSPMVSNCKLSRHGADAFHDPTLYRSVVGALQYATLTRPEISFVVNKVCQFMVAPLDSH 251

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W VVKRILRYLKGT+SHGLLLQP  I+KPL +RA+C+ADWASDVDDR+STSGAA+FLGPN
Sbjct: 252  WTVVKRILRYLKGTLSHGLLLQPTSIAKPLNIRAFCNADWASDVDDRRSTSGAAIFLGPN 311

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            L+SWW++KQ V+ARSS EAEY S+A  + E+TW+ +LL EL +S TTP IFCDNQSA++L
Sbjct: 312  LVSWWSRKQKVIARSSIEAEYCSIAQTSTELTWIYALLIELQVSFTTPIIFCDNQSAISL 371

Query: 14   AHNP 3
            AHNP
Sbjct: 372  AHNP 375


>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  496 bits (1277), Expect = e-164
 Identities = 235/364 (64%), Positives = 297/364 (81%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKP+TIR ILTLAL++ W+L Q+DVNNAFLNG L E +YM QP GFEA DKSLVCKL+K
Sbjct: 109  VIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNK 168

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            A+YGLKQAPR WF KLK TL   GF +S+CDPSLF Y+              +I+T +S+
Sbjct: 169  ALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSSS 228

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
            +LI Q+  +LDS+FSLKQLG+LDYFLGIEVK + + +L+LTQSKYIRDLL +TN+AEA+ 
Sbjct: 229  LLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHG 288

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
              SPM S+CKL++ G+D+  DP  +RSVVGALQY T+TRPEIS+AVNKVCQ+MA PL++H
Sbjct: 289  APSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMATPLDSH 348

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W  VKRIL+YLKGT+S+GL +QPA ++ P+ L A+CDADWASD+DDR+STSG+A+F GPN
Sbjct: 349  WVAVKRILKYLKGTLSYGLHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFGPN 408

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            LISWW++KQ V+ARSS EAEYRS+A A+AE+TW+Q+LL EL +  +TP + CDNQSAVA+
Sbjct: 409  LISWWSRKQRVIARSSTEAEYRSIAQASAELTWIQALLQELKVPFSTPTLLCDNQSAVAI 468

Query: 14   AHNP 3
            AHNP
Sbjct: 469  AHNP 472


>gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 482

 Score =  486 bits (1251), Expect = e-161
 Identities = 241/364 (66%), Positives = 287/364 (78%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKPVT+R ILTL L+H+W L Q+DVNNAFLNG L EEVYM+QP GFE+SDK+LVC+LHK
Sbjct: 109  VIKPVTVRLILTLVLTHRWPLKQLDVNNAFLNGTLAEEVYMTQPTGFESSDKTLVCRLHK 168

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            AIYGLKQAPRAWF KLKSTLL   F +S+CDPSLFVY               +I+T  ++
Sbjct: 169  AIYGLKQAPRAWFEKLKSTLLQFHFQASKCDPSLFVYSVDNNIIYVLVYVDDIIITGNNS 228

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
            +++  L+ RL S FSLK L  LDYFLGIEVK  S+G+L+LTQSKYIR+LL RT+M  +  
Sbjct: 229  IVLQSLVSRLHSAFSLKDLRDLDYFLGIEVKNQSDGSLILTQSKYIRNLLNRTDMEASKP 288

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            ISSPMVS CKL+K  S+   D   YRSVVGALQY TI RPEIS++VNKVCQ+M+ PLE H
Sbjct: 289  ISSPMVSGCKLSKIRSEKFPDASLYRSVVGALQYATIIRPEISFSVNKVCQFMSQPLEQH 348

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W VVKRILRYLKG IS GL LQP+  +  L ++A+CDADWASD DDR+STSGA++FLGPN
Sbjct: 349  WIVVKRILRYLKGIISWGLRLQPSPSTSSLSIQAYCDADWASDPDDRRSTSGASIFLGPN 408

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            L+SWW+KKQ VVA SS EAEYRSLALA AEV W+Q+LL+EL ++H+ P IFCDN S VAL
Sbjct: 409  LVSWWSKKQNVVACSSTEAEYRSLALAAAEVMWIQTLLSELRVNHSPPVIFCDNMSIVAL 468

Query: 14   AHNP 3
            AHNP
Sbjct: 469  AHNP 472


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  504 bits (1298), Expect = e-160
 Identities = 248/364 (68%), Positives = 293/364 (80%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKPVT+R ILTLAL+H+W + Q+DVNNAFLNG L EEVYM QP GFEASDK+LVCKLHK
Sbjct: 645  VIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEASDKNLVCKLHK 704

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            AIYGLKQAPRAWF KLKSTLL L F +S+CDPSLF+Y +             +I+T  ++
Sbjct: 705  AIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYVDDIIITGNNS 764

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             ++  L+ +L S+FSLK LG LD+FLGIEVK   +G+L+LTQSKYIRDLL RT+M  +  
Sbjct: 765  SILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKP 824

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            ISSPM+S  KL+K GS+  LD   YRSVVGALQY TITRPEIS++VNKVCQ+M+ PL  H
Sbjct: 825  ISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHH 884

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            WA VKRILRYLKGT S GL LQPA  S  L + A+CDADWASD DDR+STSGA++FLGPN
Sbjct: 885  WAAVKRILRYLKGTTSWGLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIFLGPN 944

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            L+SWW+KKQTVVARSS EAEYRSLALAT EVTW+Q+LL+EL ++H+TP IFCDN S VAL
Sbjct: 945  LVSWWSKKQTVVARSSTEAEYRSLALATTEVTWIQTLLSELKVTHSTPIIFCDNLSTVAL 1004

Query: 14   AHNP 3
            AHNP
Sbjct: 1005 AHNP 1008


>gb|KYP67562.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 482

 Score =  484 bits (1247), Expect = e-160
 Identities = 241/364 (66%), Positives = 286/364 (78%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKPVT R ILTL L+H+W L Q+DVNNAFLNG L EEVYM+QP GFE+SDK+LVC+LHK
Sbjct: 109  VIKPVTARLILTLVLTHRWPLKQLDVNNAFLNGTLAEEVYMTQPTGFESSDKTLVCRLHK 168

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            AIYGLKQAPRAWF KLKSTLL   F +S+CDPSLFVY               +I+T  ++
Sbjct: 169  AIYGLKQAPRAWFEKLKSTLLQFHFQASKCDPSLFVYSVDNNIIYVLVYVDDIIITGNNS 228

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
            +++  L+ RL S FSLK L  LDYFLGIEVK  S+G+L+LTQSKYIR+LL RT+M  +  
Sbjct: 229  IVLQSLVSRLHSAFSLKDLRDLDYFLGIEVKNQSDGSLILTQSKYIRNLLNRTDMEASKP 288

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            ISSPMVS CKL+K  S+   D   YRSVVGALQY TI RPEIS++VNKVCQ+M+ PLE H
Sbjct: 289  ISSPMVSGCKLSKIRSEKFPDASLYRSVVGALQYATIIRPEISFSVNKVCQFMSQPLEQH 348

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W VVKRILRYLKG IS GL LQP+  +  L ++A+CDADWASD DDR+STSGA++FLGPN
Sbjct: 349  WIVVKRILRYLKGIISWGLRLQPSPSTSSLSIQAYCDADWASDPDDRRSTSGASIFLGPN 408

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            L+SWW+KKQ VVA SS EAEYRSLALA AEV W+Q+LL+EL ++H+ P IFCDN S VAL
Sbjct: 409  LVSWWSKKQNVVACSSTEAEYRSLALAAAEVMWIQTLLSELRVNHSPPVIFCDNMSIVAL 468

Query: 14   AHNP 3
            AHNP
Sbjct: 469  AHNP 472


>gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 537

 Score =  486 bits (1250), Expect = e-160
 Identities = 243/364 (66%), Positives = 286/364 (78%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKPVT+R ILTLAL+H W + Q+DVNNAFLNG L EEVYM+QP GFEASDK LVCKLHK
Sbjct: 109  VIKPVTVRLILTLALTHHWPIQQLDVNNAFLNGTLEEEVYMTQPPGFEASDKCLVCKLHK 168

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            AIYGLKQAPRAWF KLKSTLL   F +S+CDPSLFVY               +I+T  ++
Sbjct: 169  AIYGLKQAPRAWFEKLKSTLLQFHFQASKCDPSLFVYSHANNVIYILVYVDDIIITSNNS 228

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             ++  L+ +L SVFSLK LG LDYFLGIEVK  S+G+L+LTQSKYIRDLL RT+M     
Sbjct: 229  SILHTLVSQLHSVFSLKDLGDLDYFLGIEVKTQSDGSLILTQSKYIRDLLNRTDMEALKP 288

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            ISSPM+   KL+K GS+  LD   YRSVVGALQY TITR EIS++VNKVCQ+M+ PL  H
Sbjct: 289  ISSPMIPDSKLSKAGSEDFLDASLYRSVVGALQYATITRLEISFSVNKVCQFMSYPLAHH 348

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
             + VKRILRYLKGT S GL LQPA  S  L + A+CDADWASD+DDR+ST GA++FL PN
Sbjct: 349  CSAVKRILRYLKGTTSWGLHLQPASSSSSLSIHAYCDADWASDLDDRRSTFGASIFLRPN 408

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            L+SWW+KK+TVVARSS +AEYRSLALAT EVTW+Q+LL+EL ++H+TP IFCDN S VAL
Sbjct: 409  LVSWWSKKKTVVARSSTKAEYRSLALATTEVTWIQTLLSELKVNHSTPIIFCDNLSTVAL 468

Query: 14   AHNP 3
            AHNP
Sbjct: 469  AHNP 472


>gb|KYP51570.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 481

 Score =  482 bits (1241), Expect = e-160
 Identities = 242/363 (66%), Positives = 282/363 (77%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIK VTIR ILTLAL+H W L Q+D+NNAFLNG L EEVYM+QP GFEASDK+LVCKLHK
Sbjct: 109  VIKLVTIRLILTLALTHHWPLQQLDINNAFLNGTLDEEVYMTQPPGFEASDKNLVCKLHK 168

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            AIYGLKQAPRAWF KLKSTLL   F +S+CDPSLFVY               +I+T   +
Sbjct: 169  AIYGLKQAPRAWFEKLKSTLLQFNFQASKCDPSLFVYSHANSVIYILVYVDDIIITSNDS 228

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             L+  L+ +L S FSLK LG LDYFLGIEVK  S+G+L+LTQSKYIRDLL  T+M  +  
Sbjct: 229  TLLHTLVSQLHSTFSLKDLGDLDYFLGIEVKTQSDGSLILTQSKYIRDLLNHTDMEASKP 288

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
             SS MVS CKL+K G++  LD   YRS+VGALQY TITRPEIS++VNKV Q+M+ PL  H
Sbjct: 289  FSSLMVSGCKLSKVGTEDFLDVSLYRSIVGALQYATITRPEISFSVNKVYQFMSHPLAHH 348

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W+ VK ILRYLKGT S GL LQPA  + PL + A+CDADWASD DDR+STSGA++FLG N
Sbjct: 349  WSTVKHILRYLKGTTSWGLHLQPAPSNSPLSIHAYCDADWASDPDDRRSTSGASIFLGTN 408

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            L+SWW+KKQ VVARSS EAEYRSLALATAEVTW+Q+LL+EL + H+ P IFCDN S VAL
Sbjct: 409  LVSWWSKKQPVVARSSTEAEYRSLALATAEVTWIQTLLSELKVRHSPPIIFCDNLSTVAL 468

Query: 14   AHN 6
            AHN
Sbjct: 469  AHN 471


>gb|PNX93473.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1181

 Score =  503 bits (1295), Expect = e-159
 Identities = 244/364 (67%), Positives = 293/364 (80%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKP+TIR IL LA+S+KW L Q+D+NNAFLNG L EEVYM QPQGFE +D SLVCKL K
Sbjct: 756  VIKPITIRLILALAISYKWPLKQLDINNAFLNGSLDEEVYMVQPQGFETTDSSLVCKLQK 815

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            A+YGLKQAPR WF KL +TL+  GF +S+CDPSLF+Y               +I+T +S 
Sbjct: 816  ALYGLKQAPRQWFDKLATTLIQFGFKASKCDPSLFIYSHNRQVVYLLVYVDDIIITGSSL 875

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             L+  L+ +LDSVFSLKQLG LDYFLGIEVK +++G+LLLTQSKYI+DLL +TNM ++N 
Sbjct: 876  TLVQHLVTKLDSVFSLKQLGNLDYFLGIEVKHLTDGSLLLTQSKYIKDLLVKTNMIDSNP 935

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            I++PM+SSCKL+K GSD + DP  YRSVVG+LQY TITRPEIS+AVNKVCQ+M+APLE+H
Sbjct: 936  IATPMMSSCKLSKVGSDNVADPTLYRSVVGSLQYATITRPEISFAVNKVCQFMSAPLESH 995

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W  VKRILRYLKGT   GL L P ++  PL L+A+CDADWASD DDR+STSGAA+F GPN
Sbjct: 996  WTAVKRILRYLKGTSHIGLKLFPTNVHHPLSLKAYCDADWASDPDDRRSTSGAAIFFGPN 1055

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            L+SWW++KQ VVARSS EAEYRSLA ATA+V WVQ+LL EL +  TTP I+CDNQSAV L
Sbjct: 1056 LVSWWSRKQQVVARSSTEAEYRSLAQATADVLWVQTLLNELTVPFTTPTIYCDNQSAVLL 1115

Query: 14   AHNP 3
            AHNP
Sbjct: 1116 AHNP 1119



 Score =  196 bits (499), Expect = 2e-48
 Identities = 95/190 (50%), Positives = 135/190 (71%)
 Frame = -3

Query: 2401 QVEPVIKAHRLHHFLIAPQIPPRYLTTDDLTNENENPAFQLWEAQDQMLLSWLQTSLTTV 2222
            QVEP I AH L  FL+APQIPPR+LT  D      NP ++ W  +DQMLLSWLQ++L++ 
Sbjct: 57   QVEPYINAHDLDDFLVAPQIPPRFLTEIDRITATLNPEYRQWRQKDQMLLSWLQSTLSSE 116

Query: 2221 IQARVVGCHHTFELWDKIHAYFSKLGRTKICQLRNELRITQLENSSVKDYIAKIKTLVDS 2042
            I  R +G HHT+ELW KI +YF K  R K  QLR ELR T LEN +V++Y+ +I+ L+D+
Sbjct: 117  ILTRFLGSHHTYELWGKILSYFQKQLRAKARQLRVELRSTTLENRTVQEYLLRIRLLIDN 176

Query: 2041 LAAVGSPISAKDHLDAILDGLPQEYDQIISLVESRFDDDVSVEEVESLLLAQEVRLNRYR 1862
            L ++G P+    HLD IL+GLP +++ +IS++ES+F D + + EVE+LLLA E RL++ +
Sbjct: 177  LVSIGDPLPLNQHLDVILEGLPTDFNTVISVIESQF-DSIDMNEVEALLLAHEARLDKSK 235

Query: 1861 KQSKSDNASV 1832
            K++  D AS+
Sbjct: 236  KKTLEDAASI 245


>dbj|GAU31266.1| hypothetical protein TSUD_153410 [Trifolium subterraneum]
          Length = 844

 Score =  493 bits (1268), Expect = e-159
 Identities = 239/364 (65%), Positives = 291/364 (79%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKPVTIR IL+L +S+KW + Q+D+NNAFLNG L EEVYM QPQGFE++D +LVCKL+K
Sbjct: 419  VIKPVTIRLILSLGISYKWPIRQLDINNAFLNGSLDEEVYMVQPQGFESTDATLVCKLNK 478

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            A+YGLKQAPR WF KL +TL+  GF +S+CDPSLF+Y +             +I+  +S 
Sbjct: 479  ALYGLKQAPRQWFDKLTTTLIQFGFNASKCDPSLFIYSQKSQVVYLLVYVDDIIIIGSSP 538

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             L+  L+ +LD+VFSLKQLG LDYFLGIEVK + +G+LLLTQ+KYI+DLL +TNM + N 
Sbjct: 539  TLVQHLVDKLDAVFSLKQLGDLDYFLGIEVKHLKDGSLLLTQTKYIKDLLVKTNMFDCNP 598

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            I++PM+SSCKL+K GSD + D   YRSVVG+LQY TITRPEIS+AVNKVCQ+M  PLE+H
Sbjct: 599  IATPMMSSCKLSKVGSDNVADATLYRSVVGSLQYATITRPEISFAVNKVCQFMPTPLESH 658

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            WA VKRILRYLKGT   GL L P +I  PL ++A+CDADWASD DDR+STSGAA+F GPN
Sbjct: 659  WAAVKRILRYLKGTSFSGLKLFPTNIHHPLSIKAYCDADWASDPDDRRSTSGAAIFFGPN 718

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            LISWW++KQ VVARSS EAEYRSLA ATA+V WVQ+LL EL +  TTP I+CDNQSAV L
Sbjct: 719  LISWWSRKQQVVARSSTEAEYRSLAQATADVLWVQTLLKELTVPFTTPTIYCDNQSAVLL 778

Query: 14   AHNP 3
            AHNP
Sbjct: 779  AHNP 782



 Score =  176 bits (446), Expect = 4e-42
 Identities = 87/190 (45%), Positives = 128/190 (67%)
 Frame = -3

Query: 2401 QVEPVIKAHRLHHFLIAPQIPPRYLTTDDLTNENENPAFQLWEAQDQMLLSWLQTSLTTV 2222
            QVEP I AH L  FL++PQIPP + T  D T    NP ++ W  +DQM  SWLQ++L++ 
Sbjct: 63   QVEPYINAHDLDDFLVSPQIPPMFRTEVDRTTATLNPEYRQWRQKDQMPFSWLQSTLSSE 122

Query: 2221 IQARVVGCHHTFELWDKIHAYFSKLGRTKICQLRNELRITQLENSSVKDYIAKIKTLVDS 2042
            I  R +G HHT+ELW KI +YF K  R K  QLRN    T LEN ++++Y+ +I+ L+D+
Sbjct: 123  ILTRFLGSHHTYELWGKIVSYFHKQLRAKARQLRN----TTLENRTIQEYLLRIRLLIDN 178

Query: 2041 LAAVGSPISAKDHLDAILDGLPQEYDQIISLVESRFDDDVSVEEVESLLLAQEVRLNRYR 1862
            L ++G P+    HLD IL+GLP E++ +IS++ES+F D + + EV++LLLA E RL++ +
Sbjct: 179  LISIGDPLPLNQHLDVILEGLPTEFNTVISVIESKF-DIIEMNEVKALLLAHEARLDKGK 237

Query: 1861 KQSKSDNASV 1832
             +   D AS+
Sbjct: 238  NRVLDDAASI 247


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  504 bits (1298), Expect = e-157
 Identities = 248/364 (68%), Positives = 293/364 (80%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKPVT+R ILTLAL+H+W + Q+DVNNAFLNG L EEVYM QP GFEASDK+LVCKLHK
Sbjct: 980  VIKPVTVRLILTLALTHRWPIQQLDVNNAFLNGTLEEEVYMQQPPGFEASDKNLVCKLHK 1039

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            AIYGLKQAPRAWF KLKSTLL L F +S+CDPSLF+Y +             +I+T  ++
Sbjct: 1040 AIYGLKQAPRAWFDKLKSTLLQLNFYASKCDPSLFIYSQGNNVIYILVYVDDIIITGNNS 1099

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             ++  L+ +L S+FSLK LG LD+FLGIEVK   +G+L+LTQSKYIRDLL RT+M  +  
Sbjct: 1100 SILHTLVSQLHSIFSLKDLGDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKP 1159

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            ISSPM+S  KL+K GS+  LD   YRSVVGALQY TITRPEIS++VNKVCQ+M+ PL  H
Sbjct: 1160 ISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHH 1219

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            WA VKRILRYLKGT S GL LQPA  S  L + A+CDADWASD DDR+STSGA++FLGPN
Sbjct: 1220 WAAVKRILRYLKGTTSWGLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGASIFLGPN 1279

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            L+SWW+KKQTVVARSS EAEYRSLALAT EVTW+Q+LL+EL ++H+TP IFCDN S VAL
Sbjct: 1280 LVSWWSKKQTVVARSSTEAEYRSLALATTEVTWIQTLLSELKVTHSTPIIFCDNLSTVAL 1339

Query: 14   AHNP 3
            AHNP
Sbjct: 1340 AHNP 1343



 Score =  217 bits (553), Expect = 4e-55
 Identities = 131/360 (36%), Positives = 192/360 (53%), Gaps = 6/360 (1%)
 Frame = -3

Query: 2401 QVEPVIKAHRLHHFLIAPQIPPRYLTTDDLTNENENPAFQLWEAQDQMLLSWLQTSLTTV 2222
            QVEPVIK HRLHH+L+ PQIP ++ T  D    + + ++  WE QDQ+LLSWLQ+S++  
Sbjct: 55   QVEPVIKGHRLHHYLVNPQIPQKFATLADRDAGHISESYLAWEQQDQLLLSWLQSSMSKD 114

Query: 2221 IQARVVGCHHTFELWDKIHAYFSKLGRTKICQLRNELRITQLENSSVKDYIAKIKTLVDS 2042
            +  RV+GC  +F+LWDKIH YF      K  QLRNELR T L+N S+ +Y+ +I+TLVD+
Sbjct: 115  MLTRVIGCKSSFQLWDKIHTYFHSHMNAKARQLRNELRSTTLDNLSISEYVLRIQTLVDA 174

Query: 2041 LAAVGSPISAKDHLDAILDGLPQEYDQIISLVESRFDDDVSVEEVESLLLAQEVRLNRYR 1862
            L A+G  +S K+HLD IL+GLP+EY+  +SL+ SRF D ++++EVE+LLL  E RL++++
Sbjct: 175  LTAIGDSVSPKEHLDIILEGLPEEYESTVSLISSRF-DLLTIDEVETLLLGHESRLDKFK 233

Query: 1861 KQSKSDNASVLLTHAASXXXXXXXXXXXXXXTVSEAPAAT-----ETHTEXXXXXXXXXX 1697
            K++    AS+ +T A +                +     +      T++           
Sbjct: 234  KKAA---ASINVTTAVTEPDPSATNPQAHLTHQNNQSGPSHRRGGRTNSRGGRFSNWAGR 290

Query: 1696 XXXRFQ-QQCQVCNKFGHSAAQCYHRFXXXXXXXXXXXXXXXXXXXXXYIRXXXXXXXXX 1520
               RF   QCQVC+++GH A+ CY+RF                                 
Sbjct: 291  GRGRFAGYQCQVCHRYGHVASACYYRF----------------------------DETYV 322

Query: 1519 XXXXXXXQALPQQALMMTAPQLASPSFFGNTAASTHVTNNSQNIQVPHASAETPSQVFVG 1340
                    A P      T P   + +++ ++ AS HVTN SQNI       E P Q+ VG
Sbjct: 323  PSSPLEAPAYPSNN-QHTNPGACNNNWYPDSGASNHVTNVSQNIH-QFTPFEGPDQIHVG 380


>gb|PNX95703.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 975

 Score =  491 bits (1264), Expect = e-157
 Identities = 242/379 (63%), Positives = 297/379 (78%)
 Frame = -2

Query: 1139 FYKLGIKD*AILITLVIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQ 960
            F++L   D     +LV+KP+TIR ILTLA+S+KW L Q+DVNNAFLNGVL EEVYM QPQ
Sbjct: 533  FHQLQGFDFTETFSLVVKPLTIRLILTLAISYKWSLQQLDVNNAFLNGVLEEEVYMEQPQ 592

Query: 959  GFEASDKSLVCKLHKAIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXX 780
            GFE S+ S+VCKL+KA+YGLKQAPR WF KL +TL+  GF +S+CDPSLF+  +      
Sbjct: 593  GFENSNPSMVCKLNKALYGLKQAPRQWFDKLTTTLVRFGFQTSKCDPSLFILNKDNHIVY 652

Query: 779  XXXXXXXVILTRTSNMLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKY 600
                   +I+T +S+ L+  L+ +L+SVFSLKQLG LDYFLGIEVK + N  LLLTQSKY
Sbjct: 653  LLVYVDDIIITGSSSQLVTSLVHKLNSVFSLKQLGLLDYFLGIEVKHLPNSTLLLTQSKY 712

Query: 599  IRDLLTRTNMAEANSISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYA 420
            IRDLLT+TNM E+N IS+PM+S+CKL+K GSD   DP  YRSVVG+LQY TITRPEI+YA
Sbjct: 713  IRDLLTKTNMLESNPISTPMMSTCKLSKVGSDKFHDPSLYRSVVGSLQYATITRPEIAYA 772

Query: 419  VNKVCQYMAAPLETHWAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVD 240
            VNKVCQ+M+ PL++HW  VKRILRYLK T+  GL+L P D+ KP+ L+ +CDADWASD D
Sbjct: 773  VNKVCQFMSNPLDSHWTAVKRILRYLKETLHMGLVLYPFDVHKPISLKVFCDADWASDPD 832

Query: 239  DRKSTSGAAVFLGPNLISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISH 60
            DR+STSGAA+F G +L+SWW++KQ VVARSS EAEYRS A ATA V W+Q+LL EL I  
Sbjct: 833  DRRSTSGAAIFFGTSLVSWWSRKQQVVARSSTEAEYRSRAQATAYVLWIQTLLKELTIPF 892

Query: 59   TTPQIFCDNQSAVALAHNP 3
            + P I+CDNQSAV LAHNP
Sbjct: 893  SQPIIYCDNQSAVLLAHNP 911


>gb|PNY08092.1| histone deacetylase [Trifolium pratense]
          Length = 1339

 Score =  498 bits (1282), Expect = e-156
 Identities = 246/364 (67%), Positives = 289/364 (79%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKP+TIR IL+LA+S+KW L Q+DVNNAFLNG L EEVYM QPQGFE SD SLVCKL+K
Sbjct: 914  VIKPITIRLILSLAISYKWPLKQLDVNNAFLNGSLDEEVYMVQPQGFEVSDSSLVCKLNK 973

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            A+YGLKQAPR WF KL +TLL  GF +S+CDPSLF Y +             +I+T +S 
Sbjct: 974  ALYGLKQAPRQWFDKLTTTLLQFGFKASKCDPSLFTYSKDRQVVYLLVYVDDIIITGSSI 1033

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             L+  L+++LDSVFSLKQLG LDYFLGIEV+ +S+ +LLLTQSKYI+DLL +TNM E   
Sbjct: 1034 TLVQTLVEKLDSVFSLKQLGNLDYFLGIEVQQLSDNSLLLTQSKYIKDLLVKTNMLECKP 1093

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            I++PM+SSCKL+K GS+ + D   YRSVVG+LQY TITRPEIS+AVNKVCQ+M+APLETH
Sbjct: 1094 IATPMMSSCKLSKVGSNTVADTTLYRSVVGSLQYATITRPEISFAVNKVCQFMSAPLETH 1153

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W  VKRILRYLKGTI  GL L P DI  PL LR +CDADWASD DDR+STSGAA+F GPN
Sbjct: 1154 WIAVKRILRYLKGTIDQGLKLLPTDIHHPLPLRVFCDADWASDPDDRRSTSGAAIFFGPN 1213

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            LISWW++KQ VVARSS EAEYRSLA ATA+  WVQ+LL EL +    P I+CDNQSAV L
Sbjct: 1214 LISWWSRKQQVVARSSTEAEYRSLAQATADALWVQTLLKELTVPFLAPVIYCDNQSAVLL 1273

Query: 14   AHNP 3
            AHNP
Sbjct: 1274 AHNP 1277



 Score =  189 bits (480), Expect = 7e-46
 Identities = 105/280 (37%), Positives = 154/280 (55%), Gaps = 20/280 (7%)
 Frame = -3

Query: 2401 QVEPVIKAHRLHHFLIAPQIPPRYLTTDDLTNENENPAFQLWEAQDQMLLSWLQTSLTTV 2222
            QVEP I AH L   L +P IPPR+L   D T    NPA++ W  QDQMLLSWLQ++L++ 
Sbjct: 65   QVEPYINAHGLDDLLASPSIPPRFLNETDRTTATLNPAYRKWRQQDQMLLSWLQSTLSSE 124

Query: 2221 IQARVVGCHHTFELWDKIHAYFSKLGRTKICQLRNELRITQLENSSVKDYIAKIKTLVDS 2042
            I AR +G   + +LW KI ++F K  R K   LR ELR T LEN S+++Y+ +I+ ++D+
Sbjct: 125  ILARFLGSRTSQDLWGKILSFFHKQLRAKARMLRVELRSTTLENRSIREYLLRIRLIIDN 184

Query: 2041 LAAVGSPISAKDHLDAILDGLPQEYDQIISLVESRFDDDVSVEEVESLLLAQEVRLNRYR 1862
            LA++G P+    H+D IL+GLP E++ +IS+VESRF + + ++EVE+LLLA E RL + +
Sbjct: 185  LASIGDPLPLSQHIDVILEGLPAEFNSVISVVESRF-ESIDMDEVEALLLAHETRLEKSK 243

Query: 1861 KQSKSDNASVLLTHAASXXXXXXXXXXXXXXTVSEAPAATETH----------------- 1733
            K++  D AS+ L    +              +V+ + +A  +                  
Sbjct: 244  KKTLDDAASINLAQNPNTDSATPDQPNDNPPSVNNSYSAESSKLGPENSGYNPYYGAPRG 303

Query: 1732 ---TEXXXXXXXXXXXXXRFQQQCQVCNKFGHSAAQCYHR 1622
                                  QCQ+CNK  HSA  C+HR
Sbjct: 304  RGGRNGRGARGRGGRPNPNGNLQCQICNKPNHSALGCWHR 343


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1279

 Score =  496 bits (1277), Expect = e-155
 Identities = 235/364 (64%), Positives = 297/364 (81%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKP+TIR ILTLAL++ W+L Q+DVNNAFLNG L E +YM QP GFEA DKSLVCKL+K
Sbjct: 849  VIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNK 908

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            A+YGLKQAPR WF KLK TL   GF +S+CDPSLF Y+              +I+T +S+
Sbjct: 909  ALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSSS 968

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
            +LI Q+  +LDS+FSLKQLG+LDYFLGIEVK + + +L+LTQSKYIRDLL +TN+AEA+ 
Sbjct: 969  LLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHG 1028

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
              SPM S+CKL++ G+D+  DP  +RSVVGALQY T+TRPEIS+AVNKVCQ+MA PL++H
Sbjct: 1029 APSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMATPLDSH 1088

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W  VKRIL+YLKGT+S+GL +QPA ++ P+ L A+CDADWASD+DDR+STSG+A+F GPN
Sbjct: 1089 WVAVKRILKYLKGTLSYGLHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFGPN 1148

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            LISWW++KQ V+ARSS EAEYRS+A A+AE+TW+Q+LL EL +  +TP + CDNQSAVA+
Sbjct: 1149 LISWWSRKQRVIARSSTEAEYRSIAQASAELTWIQALLQELKVPFSTPTLLCDNQSAVAI 1208

Query: 14   AHNP 3
            AHNP
Sbjct: 1209 AHNP 1212



 Score =  153 bits (386), Expect = 3e-34
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
 Frame = -3

Query: 2260 MLLSWLQTSLTTVIQARVVGCHHTFELWDKIHAYFSKLGRTKICQLRNELRITQLENSSV 2081
            MLL+WLQ++L+  I +RV+G  H++++WDK+H YF    + +  QLR +LR T L+  S+
Sbjct: 1    MLLTWLQSTLSKSILSRVIGSVHSYQVWDKVHEYFHTQTKARARQLRTDLRSTTLDGQSM 60

Query: 2080 KDYIAKIKTLVDSLAAVGSPISAKDHLDAILDGLPQEYDQIISLVESRFDDDVSVEEVES 1901
            +D++ +IKT+ D LA VGSP+S ++++DA+L+GLPQEY  ++S++ES+F     + EVE+
Sbjct: 61   RDFLTQIKTIADELAGVGSPVSLEEYVDAVLEGLPQEYAPVVSVIESKFVTP-PIAEVEA 119

Query: 1900 LLLAQEVRLNRYRKQSKSDNASVLLTHAASXXXXXXXXXXXXXXTVSEAPAATETHTEXX 1721
            LLLA E R NR+RKQS S + +    ++                      + +  H+   
Sbjct: 120  LLLAHESRANRFRKQSFSPSINYTQGYSRG--------------------SVSGGHSGRR 159

Query: 1720 XXXXXXXXXXXRFQQ-QCQVCNKFGHSAAQCYHRFXXXXXXXXXXXXXXXXXXXXXYIRX 1544
                       RF   QCQ+C K+GH+A  C++R                          
Sbjct: 160  GGRGSGRGRGGRFANFQCQICFKYGHTANVCFYR-------------------------- 193

Query: 1543 XXXXXXXXXXXXXXXQALPQQALMMTAPQLASPSFFGNTAASTHVTNNSQNI-QVPHASA 1367
                           ++L    +  T+   A+ S+  ++ AS HVT   QNI Q+ H   
Sbjct: 194  -------ADVNYQPAESLVLAMVANTSQPGANSSWIPDSGASFHVTGEPQNIHQLEH--F 244

Query: 1366 ETPSQVFVG 1340
            + P Q+F+G
Sbjct: 245  DGPDQIFIG 253


>gb|KYP47651.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 538

 Score =  473 bits (1217), Expect = e-155
 Identities = 234/363 (64%), Positives = 282/363 (77%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            V+KPVTIR ILTLAL+H W + Q+DVNN FLNG L EEVYMSQP GFE+SDK+LV K+HK
Sbjct: 109  VVKPVTIRLILTLALTHHWSIQQLDVNNTFLNGNLEEEVYMSQPPGFESSDKALVYKIHK 168

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
             IYGLKQAPRAWF KLK+TL  L F  S+C+PSLFVY               +I+T  ++
Sbjct: 169  EIYGLKQAPRAWFDKLKATLFQLNFQISKCNPSLFVYSHGNHVIYILVYVDDIIITGNNS 228

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             ++  +I +L+S FSLK LG LD+FLGIE K   +G+  LTQSKYIRDLL RTNM  +N 
Sbjct: 229  SILRSIIAQLNSAFSLKDLGRLDFFLGIEAKSNPDGSPTLTQSKYIRDLLNRTNMENSNP 288

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            ISSPMVS CKL+K G    +D   YRSVVGALQY TITRP+IS++VNKVCQ+M+ PLE H
Sbjct: 289  ISSPMVSGCKLSKTGLKKFIDVTLYRSVVGALQYATITRPKISFSVNKVCQFMSNPLEQH 348

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W+ +KRILRYLKGT+  GL LQPA  + PL + A+ DADWASD DD +STSGA++F+GPN
Sbjct: 349  WSAIKRILRYLKGTMFPGLHLQPAPSNSPLSICAYRDADWASDPDDGRSTSGASIFVGPN 408

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            LISWW+KKQTVVARSSAEAEYRSLALATAE  W+Q+LL+EL +SH TP ++CDN S V+L
Sbjct: 409  LISWWSKKQTVVARSSAEAEYRSLALATAEALWIQTLLSELHVSHHTPVVYCDNMSTVSL 468

Query: 14   AHN 6
            AHN
Sbjct: 469  AHN 471


>gb|PNX93462.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1489

 Score =  499 bits (1285), Expect = e-155
 Identities = 245/364 (67%), Positives = 295/364 (81%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKPVTIR IL+LA+S+KW L Q+D+NNAFLNG L EEVYM QPQGFE  D SLVCKL+K
Sbjct: 1064 VIKPVTIRLILSLAISYKWPLKQLDINNAFLNGSLNEEVYMVQPQGFEEKDSSLVCKLNK 1123

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            A+YGLKQAPR WF KL STL+  GF +S+CDPSLF+Y +             +I+T +S 
Sbjct: 1124 ALYGLKQAPRQWFDKLTSTLIQFGFKASKCDPSLFIYSKNCQIVYLLVYVDDIIITGSSP 1183

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             L+  L+ +LDSVFSLKQLG L+YFLGIEVK +S+G+LLLTQ+KYI+DLL +TNM ++N 
Sbjct: 1184 DLVQHLVNKLDSVFSLKQLGELEYFLGIEVKNLSDGSLLLTQTKYIKDLLIKTNMLDSNP 1243

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            I++PM+SSCKL+K GSD M D   YRSVVG+LQY TI+RPEIS+AVNKVCQ+M+APLE+H
Sbjct: 1244 IATPMMSSCKLSKIGSDNMNDATLYRSVVGSLQYATISRPEISFAVNKVCQFMSAPLESH 1303

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W  VKRILRYLKGT   GL L PA+I+ PL LRA+CDADWASD DDR+STSGAA+F GPN
Sbjct: 1304 WVAVKRILRYLKGTSHLGLRLFPANINHPLSLRAFCDADWASDPDDRRSTSGAAIFFGPN 1363

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            LISWW++KQ VVARSS EAEYRSLA  TA+V W+Q+LL EL +  TTP ++CDNQSAV L
Sbjct: 1364 LISWWSRKQQVVARSSTEAEYRSLAQITADVLWLQTLLKELTVPFTTPTVYCDNQSAVLL 1423

Query: 14   AHNP 3
            AHNP
Sbjct: 1424 AHNP 1427



 Score =  195 bits (496), Expect = 7e-48
 Identities = 94/190 (49%), Positives = 133/190 (70%)
 Frame = -3

Query: 2401 QVEPVIKAHRLHHFLIAPQIPPRYLTTDDLTNENENPAFQLWEAQDQMLLSWLQTSLTTV 2222
            QVEP I AH L  FL+ P IPPR+LT  D      NP ++ W  +DQMLLSWLQ++L++ 
Sbjct: 49   QVEPYINAHDLDDFLVDPHIPPRFLTETDRITATLNPNYRSWRKKDQMLLSWLQSTLSSE 108

Query: 2221 IQARVVGCHHTFELWDKIHAYFSKLGRTKICQLRNELRITQLENSSVKDYIAKIKTLVDS 2042
            I  R +GCHHT+ELW KI +YF +  R K  QLR ELR T LEN +VK+Y+ +I+ L+D+
Sbjct: 109  ILTRFLGCHHTYELWGKILSYFHQQLRAKARQLRVELRSTTLENKTVKEYLLRIRLLIDN 168

Query: 2041 LAAVGSPISAKDHLDAILDGLPQEYDQIISLVESRFDDDVSVEEVESLLLAQEVRLNRYR 1862
            L ++G P+    HLD IL+GLP +++ +IS++ES+F D + + EVE+LLLA E RL + +
Sbjct: 169  LVSIGDPLPLNQHLDVILEGLPTDFNSVISVIESKF-DIIDMNEVEALLLAHEARLEKGK 227

Query: 1861 KQSKSDNASV 1832
            K++  D AS+
Sbjct: 228  KRTLEDAASI 237


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  496 bits (1277), Expect = e-155
 Identities = 235/364 (64%), Positives = 297/364 (81%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            VIKP+TIR ILTLAL++ W+L Q+DVNNAFLNG L E +YM QP GFEA DKSLVCKL+K
Sbjct: 928  VIKPITIRIILTLALTNNWNLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNK 987

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            A+YGLKQAPR WF KLK TL   GF +S+CDPSLF Y+              +I+T +S+
Sbjct: 988  ALYGLKQAPRQWFNKLKLTLTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSSS 1047

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
            +LI Q+  +LDS+FSLKQLG+LDYFLGIEVK + + +L+LTQSKYIRDLL +TN+AEA+ 
Sbjct: 1048 LLIQQITNQLDSIFSLKQLGSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHG 1107

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
              SPM S+CKL++ G+D+  DP  +RSVVGALQY T+TRPEIS+AVNKVCQ+MA PL++H
Sbjct: 1108 APSPMFSNCKLSRSGNDFFHDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMATPLDSH 1167

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W  VKRIL+YLKGT+S+GL +QPA ++ P+ L A+CDADWASD+DDR+STSG+A+F GPN
Sbjct: 1168 WVAVKRILKYLKGTLSYGLHMQPAAVNGPISLTAFCDADWASDIDDRRSTSGSAIFFGPN 1227

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            LISWW++KQ V+ARSS EAEYRS+A A+AE+TW+Q+LL EL +  +TP + CDNQSAVA+
Sbjct: 1228 LISWWSRKQRVIARSSTEAEYRSIAQASAELTWIQALLQELKVPFSTPTLLCDNQSAVAI 1287

Query: 14   AHNP 3
            AHNP
Sbjct: 1288 AHNP 1291



 Score =  214 bits (544), Expect = 6e-54
 Identities = 125/356 (35%), Positives = 194/356 (54%), Gaps = 2/356 (0%)
 Frame = -3

Query: 2401 QVEPVIKAHRLHHFLIAPQIPPRYLTTDDLTNENENPAFQLWEAQDQMLLSWLQTSLTTV 2222
            Q+EPVIK+H+L  F++ PQIPPRYLT  D  ++  NPA++ WE QDQMLL+WLQ++L+  
Sbjct: 33   QIEPVIKSHKLQRFVVNPQIPPRYLTDADRDSDIVNPAYETWEVQDQMLLTWLQSTLSKS 92

Query: 2221 IQARVVGCHHTFELWDKIHAYFSKLGRTKICQLRNELRITQLENSSVKDYIAKIKTLVDS 2042
            I +RV+G  H++++WDK+H YF    + +  QLR +LR T L+  S++D++ +IKT+ D 
Sbjct: 93   ILSRVIGSVHSYQVWDKVHEYFHTQTKARARQLRTDLRSTTLDGQSMRDFLTQIKTIADE 152

Query: 2041 LAAVGSPISAKDHLDAILDGLPQEYDQIISLVESRFDDDVSVEEVESLLLAQEVRLNRYR 1862
            LA VGSP+S ++++DA+L+GLPQEY  ++S++ES+F     + EVE+LLLA E R NR+R
Sbjct: 153  LAGVGSPVSLEEYVDAVLEGLPQEYAPVVSVIESKFVTP-PIAEVEALLLAHESRANRFR 211

Query: 1861 KQSKSDNASVLLTHAASXXXXXXXXXXXXXXTVSEAPAATETHTEXXXXXXXXXXXXXRF 1682
            KQS S + +    ++                      + +  H+              RF
Sbjct: 212  KQSFSPSINYTQGYSRG--------------------SVSGGHSGRRGGRGSGRGRGGRF 251

Query: 1681 QQ-QCQVCNKFGHSAAQCYHRFXXXXXXXXXXXXXXXXXXXXXYIRXXXXXXXXXXXXXX 1505
               QCQ+C K+GH+A  C++R                                       
Sbjct: 252  ANFQCQICFKYGHTANVCFYR---------------------------------ADVNYQ 278

Query: 1504 XXQALPQQALMMTAPQLASPSFFGNTAASTHVTNNSQNI-QVPHASAETPSQVFVG 1340
              ++L    +  T+   A+ S+  ++ AS HVT   QNI Q+ H   + P Q+F+G
Sbjct: 279  PAESLVLAMVANTSQPGANSSWIPDSGASFHVTGEPQNIHQLEH--FDGPDQIFIG 332


>gb|KYP63857.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 490

 Score =  469 bits (1207), Expect = e-154
 Identities = 237/364 (65%), Positives = 279/364 (76%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            V+KPVTIR ILTLAL+H W + Q+DVNNAFLN  L EEVYMSQP GFE+SDK+LV KLHK
Sbjct: 69   VVKPVTIRFILTLALTHHWSIQQLDVNNAFLNENLEEEVYMSQPPGFESSDKTLVYKLHK 128

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            AIYGLKQAP AWF KLK+TL  L F  S+CDPSLFVY               +I+T  ++
Sbjct: 129  AIYGLKQAPHAWFDKLKATLFQLNFQISKCDPSLFVYSHGNTVIYILVYVDDIIITGNNS 188

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             ++  +I +L+S FSLK LG LDYFLGIEVK   +G+L LTQSKYIRDLL RTNM  +NS
Sbjct: 189  SVLQSIISQLNSAFSLKDLGRLDYFLGIEVKSNFDGSLTLTQSKYIRDLLNRTNMENSNS 248

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            ISSPMVSS K         LD   YRSVVGALQY TITRP+IS++VNKVCQ+M+ PLE H
Sbjct: 249  ISSPMVSSEKF--------LDVSLYRSVVGALQYATITRPKISFSVNKVCQFMSNPLEQH 300

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W+ +KRILRYL+GT+  GL L P     PL + A+CDADWASD DD+KSTS AA+F+GPN
Sbjct: 301  WSAIKRILRYLQGTMFLGLHLHPTPYDSPLSIHAYCDADWASDPDDQKSTSSAAIFVGPN 360

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            LISWW+KKQTVVARSS E EYRSLALATAEV W+Q+LL+EL +SH +P ++CDN S VAL
Sbjct: 361  LISWWSKKQTVVARSSTEIEYRSLALATAEVMWIQTLLSELHVSHHSPVVYCDNMSTVAL 420

Query: 14   AHNP 3
            AHNP
Sbjct: 421  AHNP 424


>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
          Length = 1488

 Score =  496 bits (1277), Expect = e-154
 Identities = 243/364 (66%), Positives = 288/364 (79%)
 Frame = -2

Query: 1094 VIKPVTIRTILTLALSHKWDLHQIDVNNAFLNGVLTEEVYMSQPQGFEASDKSLVCKLHK 915
            V+KPVTIR ILT+A++  W + Q+DVNNAFLNGVL EEVYM QPQGFE+SD SLVCKLHK
Sbjct: 1061 VVKPVTIRVILTIAITKGWSIQQLDVNNAFLNGVLDEEVYMLQPQGFESSDSSLVCKLHK 1120

Query: 914  AIYGLKQAPRAWFYKLKSTLLHLGFTSSRCDPSLFVYKRXXXXXXXXXXXXXVILTRTSN 735
            A+YGLKQAPR WF +L+STLL LGF SS+CDPSLFVY               +I+T  + 
Sbjct: 1121 ALYGLKQAPRQWFERLQSTLLLLGFKSSKCDPSLFVYSSATDTIYLLVYVDDIIITSNNT 1180

Query: 734  MLIMQLIQRLDSVFSLKQLGTLDYFLGIEVKPMSNGNLLLTQSKYIRDLLTRTNMAEANS 555
             L+   I +L+  FSLK LG LDYFLGIEV  +S+G+LLLTQSKY+RDLLTRT+M +++ 
Sbjct: 1181 TLLHSTISKLNKAFSLKHLGNLDYFLGIEVHHLSSGSLLLTQSKYLRDLLTRTHMLDSSP 1240

Query: 554  ISSPMVSSCKLTKQGSDYMLDPLTYRSVVGALQYTTITRPEISYAVNKVCQYMAAPLETH 375
            +S+PM S+CKLTK GS  + DP  YRSVVGALQY TITRPEIS++VNK CQ+M+ PLETH
Sbjct: 1241 VSTPMQSTCKLTKLGSSPLDDPFMYRSVVGALQYATITRPEISFSVNKACQFMSHPLETH 1300

Query: 374  WAVVKRILRYLKGTISHGLLLQPADISKPLQLRAWCDADWASDVDDRKSTSGAAVFLGPN 195
            W  VKRILRYLKGT+ HGLLL PA   KP  L+A+CDADWASD DDR+STSGAA++ GPN
Sbjct: 1301 WIAVKRILRYLKGTLDHGLLLSPALPPKPPSLKAFCDADWASDPDDRRSTSGAAIYFGPN 1360

Query: 194  LISWWAKKQTVVARSSAEAEYRSLALATAEVTWVQSLLTELGISHTTPQIFCDNQSAVAL 15
            L+SWW+KKQ VVARSS EAEYRSLA ATAE+ W+Q+LLTEL +    P I CDNQSAV L
Sbjct: 1361 LVSWWSKKQPVVARSSTEAEYRSLAHATAELLWIQTLLTELHVPFAAPTILCDNQSAVML 1420

Query: 14   AHNP 3
            AHNP
Sbjct: 1421 AHNP 1424



 Score =  209 bits (533), Expect = 2e-52
 Identities = 112/272 (41%), Positives = 158/272 (58%), Gaps = 11/272 (4%)
 Frame = -3

Query: 2401 QVEPVIKAHRLHHFLIAPQIPPRYLTTDDLTNENENPAFQLWEAQDQMLLSWLQTSLTTV 2222
            QVEP I AH L  +++  +IPP+++  +   N   NPA+  W ++DQMLLSWLQ++LT  
Sbjct: 58   QVEPFINAHNLTDYVVCARIPPQFVDAEARRNGTVNPAYTKWRSRDQMLLSWLQSTLTGE 117

Query: 2221 IQARVVGCHHTFELWDKIHAYFSKLGRTKICQLRNELRITQLENSSVKDYIAKIKTLVDS 2042
            I +R++GC H  ELWD++ +YF K  R +   LR ELR   L +SS+ DY+  I+ +VD 
Sbjct: 118  ILSRMIGCAHAHELWDRLFSYFHKQTRARARHLRVELRAKTLADSSISDYLLSIRQIVDE 177

Query: 2041 LAAVGSPISAKDHLDAILDGLPQEYDQIISLVESRFDDDVSVEEVESLLLAQEVRLNRYR 1862
            LA++G P+    H+D IL+GLP EY   IS +ESRF D + ++EVE LLLA E+RLN+Y+
Sbjct: 178  LASIGDPLPVPHHIDVILEGLPSEYSPAISSIESRF-DVLDLDEVEVLLLAHELRLNKYK 236

Query: 1861 KQSKSDNASVLLTHAASXXXXXXXXXXXXXXTVSEAPAATETHTEXXXXXXXXXXXXXRF 1682
            KQ+ SD AS+ LTHAA                 +  PA+   H                 
Sbjct: 237  KQTVSDAASLNLTHAAPMQTTTEAGSSS-----TAEPASPPAHEPDYNSFRGGRRGGRGG 291

Query: 1681 QQ-----------QCQVCNKFGHSAAQCYHRF 1619
            +            QCQVC+K+GH+A  C+HRF
Sbjct: 292  RGGRGRGGRNADIQCQVCSKWGHAAFNCWHRF 323


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