BLASTX nr result
ID: Astragalus22_contig00020357
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus22_contig00020357
(946 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAU38852.1| hypothetical protein TSUD_154140 [Trifolium subt... 166 6e-88
gb|PNX95813.1| retrovirus-related Pol polyprotein from transposo... 162 3e-87
gb|PNX62837.1| retrovirus-related Pol polyprotein from transposo... 144 3e-86
dbj|GAU15685.1| hypothetical protein TSUD_109430 [Trifolium subt... 163 7e-86
gb|PNX92076.1| retrovirus-related Pol polyprotein from transposo... 153 3e-85
dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subt... 149 4e-84
gb|PNY05485.1| retrovirus-related Pol polyprotein from transposo... 150 8e-84
dbj|GAU50785.1| hypothetical protein TSUD_192210 [Trifolium subt... 136 3e-80
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo... 137 1e-78
gb|AJY78065.1| putative polyprotein [Glycine max] 137 1e-78
gb|PNX93071.1| retrovirus-related Pol polyprotein from transposo... 155 1e-77
dbj|GAU24468.1| hypothetical protein TSUD_319450 [Trifolium subt... 144 7e-77
gb|PNY00520.1| retrovirus-related Pol polyprotein from transposo... 114 1e-75
gb|PNY11804.1| retrovirus-related Pol polyprotein from transposo... 114 1e-75
gb|PNX84630.1| retrovirus-related Pol polyprotein from transposo... 116 4e-75
dbj|GAU25332.1| hypothetical protein TSUD_375950 [Trifolium subt... 138 6e-75
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo... 132 2e-74
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo... 129 3e-73
ref|XP_020540865.1| uncharacterized protein LOC110011002 [Jatrop... 125 2e-71
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 122 3e-71
>dbj|GAU38852.1| hypothetical protein TSUD_154140 [Trifolium subterraneum]
Length = 1494
Score = 166 bits (419), Expect(4) = 6e-88
Identities = 86/133 (64%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
FGIK +G+LK F GLEVAHS GI+LCQR YCL+LL D+GN G KP S PM+P + H+D
Sbjct: 1147 FGIKDIGVLKFFLGLEVAHSQQGITLCQRKYCLDLLNDTGNLGCKPSSIPMDPSNRLHHD 1206
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
DS P +I YR LVGK LYLT+TRP+I FPVQQLSQFL TT HFKAA VL+YLKG+
Sbjct: 1207 DSEPHSNITEYRALVGKLLYLTSTRPDIAFPVQQLSQFLDAPTTAHFKAAHKVLRYLKGN 1266
Query: 856 LGHGLFFS*QAFL 894
G GLFF A L
Sbjct: 1267 PGTGLFFPRNASL 1279
Score = 107 bits (268), Expect(4) = 6e-88
Identities = 49/78 (62%), Positives = 60/78 (76%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+ KADGT++RYKARLV GY Q E +DF TFSPVAKM T+RT++A+ IK WHIHQL+V
Sbjct: 980 KRKADGTIDRYKARLVAKGYNQIEGVDFSQTFSPVAKMTTIRTVLAIASIKNWHIHQLDV 1039
Query: 181 IYAFLHGKLK*DAYMTMP 234
AFLHG L + YMT+P
Sbjct: 1040 DNAFLHGDLDENVYMTVP 1057
Score = 90.5 bits (223), Expect(4) = 6e-88
Identities = 43/87 (49%), Positives = 61/87 (70%)
Frame = +2
Query: 236 RVPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVA 415
R ++ QVCKL K YG +QASRQWY++LS+ L+ +G+K +D TLFT+ T +S+
Sbjct: 1059 RFEGATSRQVCKLQKFLYGLRQASRQWYEKLSHFLITIGYKHMPSDPTLFTKTTSASFTT 1118
Query: 416 LLIYVDDIVLVGDHLSEFSHIKSKLDE 496
LL+YVDDIVL G+ L+E KS+L +
Sbjct: 1119 LLVYVDDIVLSGNCLAEIESTKSQLHQ 1145
Score = 32.7 bits (73), Expect(4) = 6e-88
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 891 LDLHGFSDSDWAGCPNS 941
L L GFSD+DW GCP+S
Sbjct: 1279 LQLMGFSDADWGGCPDS 1295
>gb|PNX95813.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1351
Score = 162 bits (410), Expect(4) = 3e-87
Identities = 82/127 (64%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
FGIK +G+LK F GLEVAHS GI+LCQR YCL+LL ++GN G KP S PM+P H+D
Sbjct: 1058 FGIKDIGVLKFFLGLEVAHSEQGITLCQRKYCLDLLNETGNLGCKPSSIPMDPSHRPHHD 1117
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
DS P +I YR LVGK LYLT+TRP+I FPVQQLSQFL T+ HFKAA VL+YLKG+
Sbjct: 1118 DSTPHENITEYRALVGKLLYLTSTRPDIAFPVQQLSQFLDAPTSLHFKAAHKVLRYLKGN 1177
Query: 856 LGHGLFF 876
G GLFF
Sbjct: 1178 PGTGLFF 1184
Score = 106 bits (264), Expect(4) = 3e-87
Identities = 48/80 (60%), Positives = 61/80 (76%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+ KADG+++RYKARLV GY Q E ID+F TFSPVAKM T+RT++A+ I+ WH+HQL+V
Sbjct: 891 KRKADGSIDRYKARLVAKGYNQIEGIDYFETFSPVAKMTTIRTVLAIASIQRWHVHQLDV 950
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L D YM +P G
Sbjct: 951 DNAFLHGDLDEDVYMKIPQG 970
Score = 92.0 bits (227), Expect(4) = 3e-87
Identities = 44/81 (54%), Positives = 58/81 (71%)
Frame = +2
Query: 254 PSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVALLIYVD 433
P++ CKL+KS YG KQASRQWY +LS+ L +G+ Q +D TLFT+ S + +LL+YVD
Sbjct: 976 PNKTCKLIKSLYGLKQASRQWYAKLSHFLTTIGYTQMPSDPTLFTKSNQSEFTSLLVYVD 1035
Query: 434 DIVLVGDHLSEFSHIKSKLDE 496
DIVL G+ L+E KSKL E
Sbjct: 1036 DIVLAGNCLAEIQVTKSKLHE 1056
Score = 33.9 bits (76), Expect(4) = 3e-87
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 885 SFLDLHGFSDSDWAGCPNS 941
S L L GFSD+DW GCP+S
Sbjct: 1188 SSLQLSGFSDADWGGCPDS 1206
>gb|PNX62837.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 297
Score = 144 bits (363), Expect(3) = 3e-86
Identities = 76/128 (59%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
F IK LG LK F G+EVAHS GI+LCQR Y L+LL+D+G G+KP TP++P H D
Sbjct: 170 FKIKDLGQLKYFLGIEVAHSNQGITLCQRKYFLDLLQDTGLLGAKPAKTPLDPSVKLHQD 229
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
S P+ IA YR LVGK LYLTTTRP+I F QQLSQFL+ T H+ A V++YLKGS
Sbjct: 230 TSPPYADIASYRRLVGKLLYLTTTRPDIAFVTQQLSQFLTSPTQVHYDTACRVIKYLKGS 289
Query: 856 LGHGLFFS 879
G GLFFS
Sbjct: 290 PGRGLFFS 297
Score = 114 bits (286), Expect(3) = 3e-86
Identities = 53/80 (66%), Positives = 66/80 (82%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+HKADG++ERYKARLV GYTQ E IDFF TFSPVAK+ TVRTLIA+ I+ WH+HQL+V
Sbjct: 3 KHKADGSIERYKARLVAKGYTQVEGIDFFETFSPVAKITTVRTLIALAAIQSWHLHQLDV 62
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG+L+ + YM++P G
Sbjct: 63 NNAFLHGELQEEVYMSIPQG 82
Score = 110 bits (276), Expect(3) = 3e-86
Identities = 51/86 (59%), Positives = 67/86 (77%)
Frame = +2
Query: 239 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVAL 418
V +S P+QVCKLLKS YG KQASR+WY++L+ +L+ G+ Q +DH+LFT DSS+ AL
Sbjct: 83 VTTSRPNQVCKLLKSLYGLKQASRKWYEKLTGVLLAQGYVQSSSDHSLFTLSKDSSFTAL 142
Query: 419 LIYVDDIVLVGDHLSEFSHIKSKLDE 496
L+YVDDI+L GD L EF+HIK LD+
Sbjct: 143 LVYVDDIILAGDSLDEFTHIKQLLDD 168
>dbj|GAU15685.1| hypothetical protein TSUD_109430 [Trifolium subterraneum]
Length = 1245
Score = 163 bits (413), Expect(4) = 7e-86
Identities = 84/127 (66%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
FGIK +GILK F GLEVAHS GI+LCQR YCL+LL ++GN G KP S PM+P H+D
Sbjct: 1010 FGIKDIGILKFFLGLEVAHSDQGITLCQRKYCLDLLAETGNLGCKPSSIPMDPSHRPHHD 1069
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
DS P +I YR LVGK LYLT+TRP+I FPVQQLSQFL TT HFKAA VL+YLKG+
Sbjct: 1070 DSTPHDNITEYRALVGKLLYLTSTRPDIAFPVQQLSQFLDAPTTLHFKAAHKVLRYLKGN 1129
Query: 856 LGHGLFF 876
G GLFF
Sbjct: 1130 PGTGLFF 1136
Score = 103 bits (256), Expect(4) = 7e-86
Identities = 47/80 (58%), Positives = 58/80 (72%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+ KADG+++RYKARLV GY Q E +D+F TFSPV KM T+RT++A I WHIHQL+V
Sbjct: 843 KRKADGSIDRYKARLVAKGYNQVEGVDYFETFSPVEKMTTIRTILAAASIHRWHIHQLDV 902
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L D YM +P G
Sbjct: 903 DNAFLHGDLDEDVYMKIPQG 922
Score = 92.0 bits (227), Expect(4) = 7e-86
Identities = 44/80 (55%), Positives = 56/80 (70%)
Frame = +2
Query: 257 SQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVALLIYVDD 436
++ CKL+KS YG KQASRQWY +LS L +G+ Q AD TLFT+ DS + ALL+YVDD
Sbjct: 929 NKACKLVKSLYGLKQASRQWYAKLSKFLTTIGYVQMPADPTLFTKSHDSQFTALLVYVDD 988
Query: 437 IVLVGDHLSEFSHIKSKLDE 496
+VL G+ L E +H K L E
Sbjct: 989 VVLTGNCLEEITHTKKHLHE 1008
Score = 31.2 bits (69), Expect(4) = 7e-86
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 885 SFLDLHGFSDSDWAGCPNS 941
S L L FSD+DW GCP+S
Sbjct: 1140 SSLQLSDFSDADWGGCPDS 1158
>gb|PNX92076.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 720
Score = 153 bits (386), Expect(4) = 3e-85
Identities = 82/127 (64%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
F IK LG LK F GLEVAHS GISLCQR YCL+LL DSG G+KPVSTP + H D
Sbjct: 400 FKIKDLGQLKYFLGLEVAHSAKGISLCQRKYCLDLLSDSGLLGAKPVSTPSDASLKLHAD 459
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
DS PF I+ YR LVG+ LYL TTRP+ITF QQLSQFLSK T H+ AA VL+YLK
Sbjct: 460 DSAPFEDISAYRRLVGRLLYLNTTRPDITFITQQLSQFLSKPTHTHYSAAMRVLRYLKNC 519
Query: 856 LGHGLFF 876
G GLFF
Sbjct: 520 PGRGLFF 526
Score = 105 bits (262), Expect(4) = 3e-85
Identities = 44/82 (53%), Positives = 68/82 (82%)
Frame = +2
Query: 245 SSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVALLI 424
++ P++VCKL+KS YG KQASRQWY +L++LL++ G+KQ H+DH+LFT+ S + LL+
Sbjct: 315 TNDPNKVCKLVKSLYGLKQASRQWYAKLTSLLLSHGYKQAHSDHSLFTKHDASHFTLLLV 374
Query: 425 YVDDIVLVGDHLSEFSHIKSKL 490
YVDD++L G+H++EFS++K+ L
Sbjct: 375 YVDDVILAGNHMAEFSYVKNLL 396
Score = 98.2 bits (243), Expect(4) = 3e-85
Identities = 45/80 (56%), Positives = 59/80 (73%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+H ADG++ERYKARLV G+ Q E +D+F+TFSPVAK+ TVR +IA+ + W +HQL+V
Sbjct: 234 KHHADGSVERYKARLVAKGFNQIEGLDYFDTFSPVAKLTTVRIVIALASVHNWFLHQLDV 293
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L+ D YM P G
Sbjct: 294 NNAFLHGDLQEDVYMLPPPG 313
Score = 30.8 bits (68), Expect(4) = 3e-85
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 885 SFLDLHGFSDSDWAGCPNS 941
S L + GFSD+DWAGC +S
Sbjct: 530 STLQILGFSDADWAGCKDS 548
>dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subterraneum]
Length = 1512
Score = 149 bits (376), Expect(4) = 4e-84
Identities = 77/131 (58%), Positives = 93/131 (70%), Gaps = 1/131 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
F IK LG LK F G+EVAHS GIS+CQR YCL+LL+D+G GSKP TP++P H D
Sbjct: 1204 FKIKDLGPLKYFLGIEVAHSKQGISICQRKYCLDLLKDTGLLGSKPAPTPLDPSIKLHQD 1263
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
S + + YR L+GK LYLTTTRP+I+F +QQLSQFLS TT HF A V++YLKGS
Sbjct: 1264 SSPAYDDVGGYRRLIGKLLYLTTTRPDISFAIQQLSQFLSSPTTTHFDTACRVVRYLKGS 1323
Query: 856 LGHGLFFS*QA 888
G GLFF Q+
Sbjct: 1324 PGRGLFFPRQS 1334
Score = 109 bits (272), Expect(4) = 4e-84
Identities = 50/80 (62%), Positives = 64/80 (80%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+HKADG++ERYKARLV GY Q E +DFF+TFSPVAK+ TVRTLIA+ I+ WH++Q++V
Sbjct: 1037 KHKADGSVERYKARLVAKGYNQVEGLDFFDTFSPVAKITTVRTLIALASIRSWHLNQMDV 1096
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L+ D YM +P G
Sbjct: 1097 NNAFLHGDLQEDVYMEVPQG 1116
Score = 99.0 bits (245), Expect(4) = 4e-84
Identities = 47/85 (55%), Positives = 62/85 (72%)
Frame = +2
Query: 239 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVAL 418
V S P QVCKLLKS YG KQASR+WY++L++LL+ G+ Q +DH+LFT S + AL
Sbjct: 1117 VNSPKPHQVCKLLKSLYGLKQASRKWYEKLTSLLLKEGYTQASSDHSLFTLKHGSDFTAL 1176
Query: 419 LIYVDDIVLVGDHLSEFSHIKSKLD 493
L+YVDDI+L G+ L EF+ IK +D
Sbjct: 1177 LVYVDDIILAGNSLQEFARIKLIMD 1201
Score = 26.2 bits (56), Expect(4) = 4e-84
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 891 LDLHGFSDSDWAGCPNS 941
L L GF+D+DWA C ++
Sbjct: 1336 LQLLGFADADWANCADT 1352
>gb|PNY05485.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 359
Score = 150 bits (380), Expect(4) = 8e-84
Identities = 80/127 (62%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
F IK LG LK F GLEVAHS GISLCQR +CL+LL DSG G+KPVSTP H D
Sbjct: 201 FKIKDLGQLKYFLGLEVAHSAKGISLCQRKHCLDLLTDSGLLGAKPVSTPSNASIKLHAD 260
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
D+ P+ I+ YRHLVG+ LYL TTRP+ITF QQLSQFLSK T H+ AA VL+YLK
Sbjct: 261 DTAPYEDISAYRHLVGRLLYLNTTRPDITFITQQLSQFLSKPTHTHYNAAMRVLKYLKNC 320
Query: 856 LGHGLFF 876
G GLFF
Sbjct: 321 PGRGLFF 327
Score = 101 bits (252), Expect(4) = 8e-84
Identities = 42/82 (51%), Positives = 66/82 (80%)
Frame = +2
Query: 245 SSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVALLI 424
++ P++VCKL+KS YG KQASRQWY + ++LL++ G+KQ H DH+LFT+ S + LL+
Sbjct: 116 TNDPNKVCKLVKSLYGLKQASRQWYAKHTSLLLSHGYKQAHCDHSLFTKHDASHFTLLLV 175
Query: 425 YVDDIVLVGDHLSEFSHIKSKL 490
YVDD+++ G+H++EFS++K+ L
Sbjct: 176 YVDDVIIAGNHMAEFSYVKNLL 197
Score = 100 bits (248), Expect(4) = 8e-84
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+H ADGT+ERYKARLV G+ Q E +D+F+TFSPVAK+ TVR +IA+ + W +HQL V
Sbjct: 35 KHHADGTVERYKARLVAKGFNQIEGLDYFDTFSPVAKLTTVRMVIALATVHNWFLHQLGV 94
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L+ D +MT P G
Sbjct: 95 TNAFLHGDLQEDVHMTPPPG 114
Score = 30.4 bits (67), Expect(4) = 8e-84
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 885 SFLDLHGFSDSDWAGCPNS 941
S L + GFSD+DWAGC +S
Sbjct: 331 STLHILGFSDADWAGCKDS 349
>dbj|GAU50785.1| hypothetical protein TSUD_192210 [Trifolium subterraneum]
Length = 1214
Score = 136 bits (343), Expect(4) = 3e-80
Identities = 70/128 (54%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
F IK+LG LK F GLEVAHS GI++ QR YCL++L+DSG GSKP TPM+ H++
Sbjct: 928 FKIKNLGQLKYFLGLEVAHSKSGITISQRKYCLDMLKDSGLLGSKPAMTPMDTSIKLHSN 987
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
+P+ ++ YR +VGK LYL TTRP+I F QQLSQF+ TT HF AA VL+YLK +
Sbjct: 988 AGIPYDDVSSYRRMVGKLLYLNTTRPDIAFATQQLSQFMHAPTTTHFTAACRVLRYLKNN 1047
Query: 856 LGHGLFFS 879
G G+ FS
Sbjct: 1048 PGQGVLFS 1055
Score = 115 bits (287), Expect(4) = 3e-80
Identities = 53/80 (66%), Positives = 63/80 (78%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+HKADGT+ERYKARLV GY Q E ID+F TFSPVAK+ TVRTL+A+ IK WH+HQL+V
Sbjct: 761 KHKADGTIERYKARLVAKGYNQVEGIDYFETFSPVAKLTTVRTLLAIAAIKNWHLHQLDV 820
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L+ D YM +P G
Sbjct: 821 NNAFLHGDLQEDVYMKVPDG 840
Score = 90.5 bits (223), Expect(4) = 3e-80
Identities = 43/85 (50%), Positives = 59/85 (69%)
Frame = +2
Query: 239 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVAL 418
V P+ VCKL KS YG KQASR+WY++L+ LL+ G+ Q +D++LFT + AL
Sbjct: 841 VQCDKPNLVCKLQKSLYGLKQASRKWYEKLTALLIIEGYTQAASDYSLFTLAKGDDFTAL 900
Query: 419 LIYVDDIVLVGDHLSEFSHIKSKLD 493
L+YVDDI+L G+ +SEF IK+ LD
Sbjct: 901 LVYVDDIILAGNSISEFDRIKAVLD 925
Score = 28.9 bits (63), Expect(4) = 3e-80
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 867 IILQLASFLDLHGFSDSDWAGC 932
++ S L L G+SD+DWAGC
Sbjct: 1052 VLFSRDSELQLIGYSDADWAGC 1073
>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1346
Score = 137 bits (345), Expect(3) = 1e-78
Identities = 76/143 (53%), Positives = 94/143 (65%), Gaps = 1/143 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
F IK+LG LK F GLEVAHS LGI++ QR YCL+LL+DSG G KP STP++ H+
Sbjct: 1075 FKIKNLGKLKYFLGLEVAHSRLGITISQRKYCLDLLKDSGLLGCKPASTPLDTSIKLHSA 1134
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
P+ I+ YR +VGK LYL TTRP+I F QQLSQF+ T HF AA VL+YLK +
Sbjct: 1135 AGTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTNVHFNAACRVLRYLKNN 1194
Query: 856 LGHGLFFS*QAFLISTASVTLIG 924
G G+FFS T+ + LIG
Sbjct: 1195 PGQGIFFS------RTSEMQLIG 1211
Score = 110 bits (276), Expect(3) = 1e-78
Identities = 52/80 (65%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+HKA+G +ERYKARLV GY Q E ID+F TFSPVAK+ TVRTL+AV IK WH+HQL+V
Sbjct: 908 KHKANGQIERYKARLVAKGYNQVEGIDYFETFSPVAKITTVRTLLAVAAIKNWHLHQLDV 967
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L+ D YM +P G
Sbjct: 968 NNAFLHGDLQEDVYMKIPDG 987
Score = 96.3 bits (238), Expect(3) = 1e-78
Identities = 44/85 (51%), Positives = 62/85 (72%)
Frame = +2
Query: 239 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVAL 418
V + P+ VCKL KS YG KQASR+WY++L+NLL+ G+ Q +D++LFT +++ AL
Sbjct: 988 VTCAKPNSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNTFTAL 1047
Query: 419 LIYVDDIVLVGDHLSEFSHIKSKLD 493
L+YVDDI+L GD + EF IK+ LD
Sbjct: 1048 LVYVDDIILAGDSIDEFDRIKNVLD 1072
>gb|AJY78065.1| putative polyprotein [Glycine max]
Length = 523
Score = 137 bits (345), Expect(3) = 1e-78
Identities = 76/143 (53%), Positives = 94/143 (65%), Gaps = 1/143 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
F IK+LG LK F GLEVAHS LGI++ QR YCL+LL+DSG G KP STP++ H+
Sbjct: 226 FKIKNLGKLKYFLGLEVAHSRLGITISQRKYCLDLLKDSGLLGCKPASTPLDTSIKLHSA 285
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
P+ I+ YR +VGK LYL TTRP+I F QQLSQF+ T HF AA VL+YLK +
Sbjct: 286 AGTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTNVHFNAACRVLRYLKNN 345
Query: 856 LGHGLFFS*QAFLISTASVTLIG 924
G G+FFS T+ + LIG
Sbjct: 346 PGQGIFFS------RTSEMQLIG 362
Score = 110 bits (276), Expect(3) = 1e-78
Identities = 52/80 (65%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+HKA+G +ERYKARLV GY Q E ID+F TFSPVAK+ TVRTL+AV IK WH+HQL+V
Sbjct: 59 KHKANGQIERYKARLVAKGYNQVEGIDYFETFSPVAKITTVRTLLAVAAIKNWHLHQLDV 118
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L+ D YM +P G
Sbjct: 119 NNAFLHGDLQEDVYMKIPDG 138
Score = 96.3 bits (238), Expect(3) = 1e-78
Identities = 44/85 (51%), Positives = 62/85 (72%)
Frame = +2
Query: 239 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVAL 418
V + P+ VCKL KS YG KQASR+WY++L+NLL+ G+ Q +D++LFT +++ AL
Sbjct: 139 VTCAKPNSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNTFTAL 198
Query: 419 LIYVDDIVLVGDHLSEFSHIKSKLD 493
L+YVDDI+L GD + EF IK+ LD
Sbjct: 199 LVYVDDIILAGDSIDEFDRIKNVLD 223
>gb|PNX93071.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1455
Score = 155 bits (393), Expect(3) = 1e-77
Identities = 85/143 (59%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
FGIK LG+LK F GLEVAHS GISL QR YCL+LL ++G+ G KP S PM+PG H+D
Sbjct: 1155 FGIKDLGVLKFFLGLEVAHSTKGISLSQRQYCLDLLAETGDLGCKPSSIPMDPGHKLHHD 1214
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
DS P I YR LVGK LYLT TRP+I FPVQQL QFL T+ H+KAA VL+YLKG
Sbjct: 1215 DSAPHTDITGYRTLVGKLLYLTNTRPDIAFPVQQLCQFLDCPTSLHYKAAHKVLRYLKGC 1274
Query: 856 LGHGLFFS*QAFLISTASVTLIG 924
G GLFF T+S+ L+G
Sbjct: 1275 PGTGLFFP------RTSSLNLVG 1291
Score = 103 bits (256), Expect(3) = 1e-77
Identities = 47/80 (58%), Positives = 59/80 (73%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+ KADG++ERYKARLV GY Q E +D+F TFSPVAKM T+RT++A+ I W +HQL+V
Sbjct: 988 KRKADGSIERYKARLVAKGYNQIEGVDYFETFSPVAKMTTIRTVLAIASINNWFVHQLDV 1047
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L D YM +P G
Sbjct: 1048 NNAFLHGDLCEDVYMQIPQG 1067
Score = 82.4 bits (202), Expect(3) = 1e-77
Identities = 41/80 (51%), Positives = 55/80 (68%)
Frame = +2
Query: 251 SPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVALLIYV 430
S VCKL+KS YG KQASR+WY++LS L L F +D TLF + + +++ ALLIYV
Sbjct: 1072 SAGHVCKLVKSLYGLKQASRKWYEKLSQSLNELQFHSVPSDPTLFIKKSATTFTALLIYV 1131
Query: 431 DDIVLVGDHLSEFSHIKSKL 490
DDIVL GD + E + +K+ L
Sbjct: 1132 DDIVLTGDSMDEINLVKTHL 1151
>dbj|GAU24468.1| hypothetical protein TSUD_319450 [Trifolium subterraneum]
Length = 1245
Score = 144 bits (362), Expect(3) = 7e-77
Identities = 76/120 (63%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
FGIK +GILK F GLEVAHS GI+LCQR YCL+LL ++G+ G KP S PM+P H+D
Sbjct: 1013 FGIKDIGILKYFLGLEVAHSQQGITLCQRKYCLDLLTETGSLGCKPSSVPMDPSIRLHHD 1072
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
DS P I YR LVGK LYLT+TRP+I F VQQLSQFL T HFKAA VL+YLK S
Sbjct: 1073 DSEPHTDITEYRALVGKLLYLTSTRPDIAFSVQQLSQFLDAPTMIHFKAAHKVLRYLKDS 1132
Score = 102 bits (254), Expect(3) = 7e-77
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+ K DG+++RYKARLV GY Q E +D+F TFSPVAK+ T+R ++AV IK WHIHQL+V
Sbjct: 846 KRKTDGSIDRYKARLVAKGYNQIEGVDYFQTFSPVAKLTTIRIVLAVASIKHWHIHQLDV 905
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L + YM++P G
Sbjct: 906 DNAFLHGDLAEEVYMSIPQG 925
Score = 92.4 bits (228), Expect(3) = 7e-77
Identities = 45/83 (54%), Positives = 58/83 (69%)
Frame = +2
Query: 248 SSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVALLIY 427
+S +QVCKL KS YG KQASRQWY++LS L LG+ +D TLFT+ T +S+ LL+Y
Sbjct: 929 TSDNQVCKLTKSLYGLKQASRQWYEKLSQFLTTLGYAHMPSDPTLFTKQTKTSFTTLLVY 988
Query: 428 VDDIVLVGDHLSEFSHIKSKLDE 496
VDDIVL GD L E K+ L++
Sbjct: 989 VDDIVLTGDSLEEIEATKAHLNK 1011
>gb|PNY00520.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 690
Score = 114 bits (286), Expect(4) = 1e-75
Identities = 51/80 (63%), Positives = 65/80 (81%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+HK+DG++ERYKARLV GY Q E +DFF+TFSPVAK+ TVRTLIA+ +K WH+HQ++V
Sbjct: 254 KHKSDGSIERYKARLVAKGYNQVEGLDFFDTFSPVAKITTVRTLIAIASLKSWHLHQMDV 313
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L+ D YMT+P G
Sbjct: 314 NNAFLHGDLQEDVYMTVPPG 333
Score = 114 bits (284), Expect(4) = 1e-75
Identities = 70/158 (44%), Positives = 86/158 (54%), Gaps = 31/158 (19%)
Frame = +1
Query: 496 EFGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSG--NFGSKPVSTPMEPG-SH 666
EF IK LG LK F G+EVAHS GIS+CQR YCL+LL D+G GSKP TP++
Sbjct: 420 EFKIKDLGKLKYFLGIEVAHSKQGISICQRKYCLDLLLDTGLSLTGSKPAPTPLDSSVKL 479
Query: 667 HNDDSVPFHHIACYRHLVG----------------------------KFLYLTTTRPNIT 762
+ D S + I YR L+G K LYLTTTRP+I
Sbjct: 480 YQDSSAAYEDIGGYRRLMGKLLYLTTTRPDIAFAIQXDIGGYRRLMRKLLYLTTTRPDIA 539
Query: 763 FPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGSLGHGLFF 876
F +QQLSQFLS H+ A V++YLK + G G+FF
Sbjct: 540 FSIQQLSQFLSSPAITHYDTACRVVKYLKSNPGRGMFF 577
Score = 99.8 bits (247), Expect(4) = 1e-75
Identities = 47/89 (52%), Positives = 63/89 (70%)
Frame = +2
Query: 239 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVAL 418
V S P+QVCKLLKS YG KQASR+WY+RL+ LL+ +KQ + H+LFT S + AL
Sbjct: 334 VTSPKPNQVCKLLKSLYGLKQASRKWYERLTALLVKQRYKQSNPGHSLFTLTNKSEFTAL 393
Query: 419 LIYVDDIVLVGDHLSEFSHIKSKLDENLE 505
L+YVDDI+L G+ L+EF IK +D+ +
Sbjct: 394 LVYVDDIILAGNSLAEFDRIKRIMDDEFK 422
Score = 27.3 bits (59), Expect(4) = 1e-75
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 885 SFLDLHGFSDSDWAGC 932
S L L GF+D+DWA C
Sbjct: 581 STLQLSGFADADWANC 596
>gb|PNY11804.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 620
Score = 114 bits (286), Expect(4) = 1e-75
Identities = 51/80 (63%), Positives = 65/80 (81%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+HK+DG++ERYKARLV GY Q E +DFF+TFSPVAK+ TVRTLIA+ +K WH+HQ++V
Sbjct: 139 KHKSDGSIERYKARLVAKGYNQVEGLDFFDTFSPVAKITTVRTLIAIASLKSWHLHQMDV 198
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L+ D YMT+P G
Sbjct: 199 NNAFLHGDLQEDVYMTVPPG 218
Score = 114 bits (284), Expect(4) = 1e-75
Identities = 70/158 (44%), Positives = 86/158 (54%), Gaps = 31/158 (19%)
Frame = +1
Query: 496 EFGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSG--NFGSKPVSTPMEPG-SH 666
EF IK LG LK F G+EVAHS GIS+CQR YCL+LL D+G GSKP TP++
Sbjct: 305 EFKIKDLGKLKYFLGIEVAHSKQGISICQRKYCLDLLLDTGLSLTGSKPAPTPLDSSVKL 364
Query: 667 HNDDSVPFHHIACYRHLVG----------------------------KFLYLTTTRPNIT 762
+ D S + I YR L+G K LYLTTTRP+I
Sbjct: 365 YQDSSAAYEDIGGYRRLMGKLLYLTTTRPDIAFAIQXDIGGYRRLMRKLLYLTTTRPDIA 424
Query: 763 FPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGSLGHGLFF 876
F +QQLSQFLS H+ A V++YLK + G G+FF
Sbjct: 425 FSIQQLSQFLSSPAITHYDTACRVVKYLKSNPGRGMFF 462
Score = 99.8 bits (247), Expect(4) = 1e-75
Identities = 47/89 (52%), Positives = 63/89 (70%)
Frame = +2
Query: 239 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVAL 418
V S P+QVCKLLKS YG KQASR+WY+RL+ LL+ +KQ + H+LFT S + AL
Sbjct: 219 VTSPKPNQVCKLLKSLYGLKQASRKWYERLTALLVKQRYKQSNPGHSLFTLTNKSEFTAL 278
Query: 419 LIYVDDIVLVGDHLSEFSHIKSKLDENLE 505
L+YVDDI+L G+ L+EF IK +D+ +
Sbjct: 279 LVYVDDIILAGNSLAEFDRIKRIMDDEFK 307
Score = 27.3 bits (59), Expect(4) = 1e-75
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 885 SFLDLHGFSDSDWAGC 932
S L L GF+D+DWA C
Sbjct: 466 STLQLSGFADADWANC 481
>gb|PNX84630.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 543
Score = 116 bits (290), Expect(3) = 4e-75
Identities = 54/80 (67%), Positives = 66/80 (82%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+HKADG++ERYKARLV GYTQ E IDFF TFSPVAK+ TVRTLIA+ IK WH+HQL+V
Sbjct: 289 KHKADGSIERYKARLVAKGYTQVEGIDFFETFSPVAKITTVRTLIALAAIKSWHLHQLDV 348
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG+L+ + YM++P G
Sbjct: 349 NNAFLHGELQEEVYMSIPQG 368
Score = 108 bits (271), Expect(3) = 4e-75
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPG-SHHND 675
F IK LG LK F G+EVAHS GI+LCQR YCL+LL+D+G G+KP TP++P H D
Sbjct: 456 FRIKDLGQLKYFLGIEVAHSSQGITLCQRKYCLDLLQDTGLLGAKPAKTPLDPSVKLHQD 515
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNI 759
S PF IA YR LVGK LYLTTTRP+I
Sbjct: 516 TSPPFEDIASYRRLVGKLLYLTTTRPDI 543
Score = 107 bits (268), Expect(3) = 4e-75
Identities = 50/86 (58%), Positives = 66/86 (76%)
Frame = +2
Query: 239 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVAL 418
V +S P+QVCKLLKS YG KQASR+WY++L+++L+ G+ Q +DH+LFT DSS+ AL
Sbjct: 369 VTTSKPNQVCKLLKSLYGLKQASRKWYEKLTSVLLAQGYMQSSSDHSLFTLHKDSSFTAL 428
Query: 419 LIYVDDIVLVGDHLSEFSHIKSKLDE 496
L+YVDDI+L GD EF HIK LD+
Sbjct: 429 LVYVDDIILAGDSHDEFLHIKKLLDD 454
>dbj|GAU25332.1| hypothetical protein TSUD_375950 [Trifolium subterraneum]
Length = 1298
Score = 138 bits (347), Expect(4) = 6e-75
Identities = 73/127 (57%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
F IK LG LK F GLEVA S GI++ QR YCL+LL+DSG GSKP +TP++P ND
Sbjct: 1104 FKIKDLGTLKYFLGLEVAQSREGITISQRKYCLDLLKDSGLLGSKPATTPLDPAIKISND 1163
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
DS P+ I+ YR ++GK LYLT TRP+I F QQLSQFL K T H+ AA V++YLK S
Sbjct: 1164 DSKPYEDISLYRRIIGKLLYLTNTRPDIIFATQQLSQFLHKPTVNHYNAACRVIRYLKHS 1223
Query: 856 LGHGLFF 876
G GL F
Sbjct: 1224 PGRGLLF 1230
Score = 108 bits (271), Expect(4) = 6e-75
Identities = 49/80 (61%), Positives = 65/80 (81%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
++K+DGT+ER+KARLV GY Q E +DFF+TFSPVAK+ TVR L+A +KGW++HQL+V
Sbjct: 963 KYKSDGTIERHKARLVAKGYNQIEGLDFFDTFSPVAKLTTVRLLLATAAVKGWYLHQLDV 1022
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
I AFLHG L+ + YMT+P G
Sbjct: 1023 INAFLHGGLQENVYMTIPEG 1042
Score = 77.4 bits (189), Expect(4) = 6e-75
Identities = 36/67 (53%), Positives = 51/67 (76%)
Frame = +2
Query: 239 VPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVAL 418
V SS P+QVCKLLKS YG KQASR+WY++L++LL+ G+ Q AD++LFT ++S + AL
Sbjct: 1043 VYSSKPNQVCKLLKSLYGLKQASRKWYEKLTSLLIKEGYSQSTADYSLFTLHSNSDFTAL 1102
Query: 419 LIYVDDI 439
L + D+
Sbjct: 1103 LFKIKDL 1109
Score = 28.5 bits (62), Expect(4) = 6e-75
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 885 SFLDLHGFSDSDWAGC 932
S L L GF+D+DWAGC
Sbjct: 1234 SDLQLLGFTDADWAGC 1249
>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1115
Score = 132 bits (332), Expect(4) = 2e-74
Identities = 73/127 (57%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
F +K LG LK F G+EVAHS GISLCQR YCL+LL DSG G KP STPM+ H+D
Sbjct: 806 FHVKDLGQLKYFLGIEVAHSSKGISLCQRKYCLDLLSDSGMLGCKPSSTPMDSTLRLHDD 865
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
S YR LVG+ +YLT TRP+I F QQLSQF+SK T H AA VL+YLK
Sbjct: 866 ASGYLDDPLPYRRLVGRLVYLTNTRPDIAFSTQQLSQFMSKPTNAHHAAAMRVLRYLKSC 925
Query: 856 LGHGLFF 876
G GLFF
Sbjct: 926 PGTGLFF 932
Score = 98.6 bits (244), Expect(4) = 2e-74
Identities = 47/83 (56%), Positives = 62/83 (74%)
Frame = +2
Query: 251 SPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVALLIYV 430
S S CKL KS YG KQ+SR+WY++LSNLL++ G+KQ H+DH+LFT+ S++ ALLIYV
Sbjct: 723 SSSHSCKLRKSLYGLKQSSRKWYEKLSNLLLSNGYKQAHSDHSLFTKRHGSAFTALLIYV 782
Query: 431 DDIVLVGDHLSEFSHIKSKLDEN 499
DDIVL G+ +E + IK L N
Sbjct: 783 DDIVLTGNSAAEITRIKHILHSN 805
Score = 95.1 bits (235), Expect(4) = 2e-74
Identities = 45/76 (59%), Positives = 55/76 (72%)
Frame = +1
Query: 13 DGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNVIYAF 192
+G++ERYKARLV GY+Q E ID+F TFSPV KM TVR ++A+ I WHI QL+V AF
Sbjct: 643 NGSIERYKARLVAKGYSQIEGIDYFETFSPVVKMTTVRVVLALASINQWHIQQLDVSNAF 702
Query: 193 LHGKLK*DAYMTMP*G 240
LHG L D YM +P G
Sbjct: 703 LHGDLLEDVYMELPQG 718
Score = 25.0 bits (53), Expect(4) = 2e-74
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 891 LDLHGFSDSDWAGC 932
+ + GFSD+DWA C
Sbjct: 938 IQVSGFSDADWATC 951
>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1013
Score = 129 bits (323), Expect(4) = 3e-73
Identities = 70/133 (52%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH-HND 675
F IK LG L+ F GLE+A S GI L QR Y L +LED G +KP STP P H+D
Sbjct: 715 FKIKDLGNLRYFLGLEIARSNKGILLNQRKYTLEILEDVGFLAAKPSSTPFNPSLKLHSD 774
Query: 676 DSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
P++ YR L+G+ LYLTTTRP+I++ VQQLSQF+SK H++AA +L+YLKGS
Sbjct: 775 HGSPYNDETAYRRLIGRLLYLTTTRPDISYVVQQLSQFVSKPLDIHYQAATRILRYLKGS 834
Query: 856 LGHGLFFS*QAFL 894
G GLF+S A L
Sbjct: 835 HGRGLFYSSSASL 847
Score = 101 bits (251), Expect(4) = 3e-73
Identities = 46/80 (57%), Positives = 63/80 (78%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
++ +DG++ERYKARLV GY+QTE +D+ +T+SPVAK+ TVR L+A+T IKGW + QL+V
Sbjct: 544 KYLSDGSIERYKARLVAKGYSQTEGLDYLDTYSPVAKLTTVRVLLALTAIKGWFLEQLDV 603
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L + YMT+P G
Sbjct: 604 NNAFLHGDLHEEVYMTLPPG 623
Score = 92.0 bits (227), Expect(4) = 3e-73
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Frame = +2
Query: 233 LRVPSSSPS--QVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSS 406
L VPSSS + +VCKL KS YG KQASRQWY +LS+ L+++G+ ADH+LF + + S
Sbjct: 624 LSVPSSSNTAPKVCKLHKSIYGLKQASRQWYSKLSSALISMGYSPSTADHSLFIKSSSSH 683
Query: 407 YVALLIYVDDIVLVGDHLSEFSHIKSKL 490
+ ALL+YVDDI+L G+ E IK++L
Sbjct: 684 FTALLVYVDDIILAGNDKPEIDFIKAQL 711
Score = 25.0 bits (53), Expect(4) = 3e-73
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 891 LDLHGFSDSDWAGC 932
L L F+DSDWA C
Sbjct: 847 LKLSAFADSDWASC 860
>ref|XP_020540865.1| uncharacterized protein LOC110011002 [Jatropha curcas]
Length = 411
Score = 125 bits (314), Expect(3) = 2e-71
Identities = 74/141 (52%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
Frame = +1
Query: 499 FGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSHHNDD 678
F IK LG LK F GLE+A S GISLCQ Y L LL D+G +KP STPM+ +
Sbjct: 202 FKIKDLGPLKFFLGLEIARSQQGISLCQWKYALELLSDTGYLAAKPASTPMDSHQKFSSH 261
Query: 679 S-VPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLKGS 855
S P A YR LVGK LYLTTTR +ITF V LSQFLSK TT H +A +L+Y+K +
Sbjct: 262 SGSPLPDSAVYRRLVGKLLYLTTTRLDITFSVNHLSQFLSKPTTVHLQALHRILRYIKSA 321
Query: 856 LGHGLFFS*QAFLISTASVTL 918
G GLFF+ S++S TL
Sbjct: 322 PGKGLFFA-----ASSSSCTL 337
Score = 106 bits (265), Expect(3) = 2e-71
Identities = 49/80 (61%), Positives = 61/80 (76%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
+H++DG++ERYKARLV GYTQ E +D+ TFSPVAKM T+R L+A+ I WHIHQL+V
Sbjct: 35 KHRSDGSIERYKARLVAKGYTQVEGLDYLETFSPVAKMTTLRLLLALASIHSWHIHQLDV 94
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG LK + YMT P G
Sbjct: 95 NNAFLHGDLKEEMYMTPPPG 114
Score = 88.2 bits (217), Expect(3) = 2e-71
Identities = 40/82 (48%), Positives = 56/82 (68%)
Frame = +2
Query: 248 SSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRITDSSYVALLIY 427
S+P QVC L KS YG KQASRQW+ ++S +L+N G+ Q DH++F + +S+ LL+Y
Sbjct: 118 SNPKQVCLLQKSLYGLKQASRQWFSKISEVLLNSGYSQSSYDHSMFIKNKLASFTILLVY 177
Query: 428 VDDIVLVGDHLSEFSHIKSKLD 493
VDDI+L GD + E +K LD
Sbjct: 178 VDDILLTGDDVFEIDLVKQNLD 199
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1427
Score = 122 bits (305), Expect(4) = 3e-71
Identities = 69/129 (53%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
Frame = +1
Query: 496 EFGIKHLGILKCFCGLEVAHSPLGISLCQR*YCLNLLEDSGNFGSKPVSTPMEPGSH--H 669
+F IK LG L+ F GLE+A S LGISL QR Y L+LL+++ KPV TP+ G+ H
Sbjct: 1119 KFKIKDLGPLRYFLGLEIARSHLGISLSQRKYTLDLLDETSFLAGKPVLTPIIKGTRLSH 1178
Query: 670 NDDSVPFHHIACYRHLVGKFLYLTTTRPNITFPVQQLSQFLSKQTTCHFKAAQ*VLQYLK 849
DS P+ A YR L+GK LYL TTRP+I++ VQQLSQFLS H++AA VL+YLK
Sbjct: 1179 TTDS-PYEDPAGYRRLIGKLLYLITTRPDISYSVQQLSQFLSCPQQSHYQAAIRVLRYLK 1237
Query: 850 GSLGHGLFF 876
G+ G GLF+
Sbjct: 1238 GNPGQGLFY 1246
Score = 98.6 bits (244), Expect(4) = 3e-71
Identities = 43/80 (53%), Positives = 62/80 (77%)
Frame = +1
Query: 1 RHKADGTLERYKARLVTNGYTQTERIDFFNTFSPVAKMATVRTLIAVTEIKGWHIHQLNV 180
++K+DG++ERYKARLV GYTQ + +D+F+TF+PVAK++TVR L+A+ + W +HQL++
Sbjct: 953 KYKSDGSIERYKARLVVKGYTQIQGLDYFDTFAPVAKLSTVRMLLAIASCQHWELHQLDI 1012
Query: 181 IYAFLHGKLK*DAYMTMP*G 240
AFLHG L D YM +P G
Sbjct: 1013 NNAFLHGDLLEDVYMEIPQG 1032
Score = 90.1 bits (222), Expect(4) = 3e-71
Identities = 44/93 (47%), Positives = 61/93 (65%)
Frame = +2
Query: 215 MRI*QCLRVPSSSPSQVCKLLKSFYGPKQASRQWYDRLSNLLMNLGFKQGHADHTLFTRI 394
M I Q L + P+ VCKL KS YG KQASRQW+ +LS+ L++L +KQ DH+LFT+
Sbjct: 1027 MEIPQGLNI--DKPNHVCKLNKSLYGLKQASRQWFAKLSSFLLSLHYKQSQHDHSLFTKH 1084
Query: 395 TDSSYVALLIYVDDIVLVGDHLSEFSHIKSKLD 493
+ + +LIYVDD+++ G E +HIK LD
Sbjct: 1085 HGTHFTVILIYVDDLIIAGTDSEEINHIKQSLD 1117
Score = 30.0 bits (66), Expect(4) = 3e-71
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 891 LDLHGFSDSDWAGCPNS 941
L L FSDSDWA CP++
Sbjct: 1252 LQLKAFSDSDWASCPDT 1268