BLASTX nr result

ID: Astragalus22_contig00020038 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00020038
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004515218.1| PREDICTED: pentatricopeptide repeat-containi...    55   4e-06
ref|XP_004515217.1| PREDICTED: pentatricopeptide repeat-containi...    55   4e-06
ref|XP_013467967.1| organelle transcript processing protein, put...    55   4e-06
gb|KYP73902.1| Putative pentatricopeptide repeat-containing prot...    54   9e-06
ref|XP_020210320.1| pentatricopeptide repeat-containing protein ...    54   9e-06

>ref|XP_004515218.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cicer arietinum]
          Length = 573

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 247 IHDVVLKYGLILDHFVCASLVDTYAKSMVI 336
           IHDVVLK+GL+LDHFVCA+LVD YAK MVI
Sbjct: 123 IHDVVLKHGLLLDHFVCATLVDMYAKCMVI 152


>ref|XP_004515217.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cicer arietinum]
          Length = 573

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 247 IHDVVLKYGLILDHFVCASLVDTYAKSMVI 336
           IHDVVLK+GL+LDHFVCA+LVD YAK MVI
Sbjct: 123 IHDVVLKHGLLLDHFVCATLVDMYAKCMVI 152


>ref|XP_013467967.1| organelle transcript processing protein, putative [Medicago
           truncatula]
 gb|KEH42004.1| organelle transcript processing protein, putative [Medicago
           truncatula]
          Length = 574

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +1

Query: 247 IHDVVLKYGLILDHFVCASLVDTYAKSMVI 336
           IHDVVLKYGL+LDHFVCA+LVD YAK  VI
Sbjct: 123 IHDVVLKYGLVLDHFVCATLVDMYAKCAVI 152


>gb|KYP73902.1| Putative pentatricopeptide repeat-containing protein At3g23330
           family [Cajanus cajan]
          Length = 511

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +1

Query: 247 IHDVVLKYGLILDHFVCASLVDTYAKSMVI 336
           IHDVVLK+GL LDHFVCASLVD YAK MV+
Sbjct: 61  IHDVVLKHGLHLDHFVCASLVDMYAKCMVV 90


>ref|XP_020210320.1| pentatricopeptide repeat-containing protein At1g08070,
           chloroplastic-like [Cajanus cajan]
          Length = 573

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +1

Query: 247 IHDVVLKYGLILDHFVCASLVDTYAKSMVI 336
           IHDVVLK+GL LDHFVCASLVD YAK MV+
Sbjct: 123 IHDVVLKHGLHLDHFVCASLVDMYAKCMVV 152


Top