BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00019473
         (473 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX57885.1| copia-type polyprotein, partial [Trifolium pratense]   224   2e-72
gb|PNX89974.1| copia-type polyprotein, partial [Trifolium pratense]   229   4e-71
gb|PRQ38020.1| putative RNA-directed DNA polymerase [Rosa chinen...   230   9e-70
gb|KZV40714.1| retrovirus-related Pol polyprotein from transposo...   228   1e-69
gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifo...   229   2e-69
gb|PNX85850.1| hypothetical protein L195_g041924 [Trifolium prat...   226   2e-69
dbj|GAU31929.1| hypothetical protein TSUD_271130, partial [Trifo...   228   2e-69
gb|KZV22085.1| retrovirus-related Pol polyprotein from transposo...   227   4e-69
gb|PNX58644.1| copia-type polyprotein [Trifolium pratense]            219   5e-69
gb|PNX88393.1| retrovirus-related Pol polyprotein from transposo...   217   2e-68
gb|PNX70305.1| copia-type polyprotein, partial [Trifolium pratense]   215   3e-68
gb|PNX68054.1| hypothetical protein L195_g055961, partial [Trifo...   213   3e-67
gb|PNX87561.1| copia-type polyprotein, partial [Trifolium pratense]   218   6e-67
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   229   7e-67
gb|PNX95204.1| copia-type polyprotein [Trifolium pratense]            229   1e-66
gb|KYP42103.1| Retrovirus-related Pol polyprotein from transposo...   209   2e-66
dbj|GAU21581.1| hypothetical protein TSUD_35440 [Trifolium subte...   228   4e-66
gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinen...   227   7e-66
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen...   227   7e-66
gb|PNX94698.1| copia-type polyprotein [Trifolium pratense]            226   9e-66

>gb|PNX57885.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 189

 Score =  224 bits (572), Expect = 2e-72
 Identities = 102/147 (69%), Positives = 126/147 (85%)
 Frame = -3

Query: 444 NDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKTKYNEKGEI 265
           NDP  +DEA KH+ WR+AM Q+++AIE+N+TWEL + P   + IGVKW++KTKYNEKGEI
Sbjct: 1   NDPNNYDEAVKHDVWRKAMDQEIQAIEKNDTWELAALPEGAKKIGVKWIYKTKYNEKGEI 60

Query: 264 DKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDVKSAFLHGE 85
           +KHK RLVAKGY+Q+YG+DY EVFAPVARWDTIRTILA+AA + W ++QLDVKSAFLHG+
Sbjct: 61  EKHKXRLVAKGYSQQYGIDYNEVFAPVARWDTIRTILAIAASQNWTIYQLDVKSAFLHGK 120

Query: 84  LSEDVYVEQPQGYHKQGGKSLVYKLKK 4
           L E+VYVEQP+GY K+G K  VYKLKK
Sbjct: 121 LIENVYVEQPKGYQKKGDK--VYKLKK 145


>gb|PNX89974.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 415

 Score =  229 bits (583), Expect = 4e-71
 Identities = 105/157 (66%), Positives = 128/157 (81%)
 Frame = -3

Query: 471 RNYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFK 292
           +N   F   +DPTTF+EA K EKWR AM  ++EAIE+N TWEL   P   + IG+KW+FK
Sbjct: 249 QNLVMFTVASDPTTFEEAVKSEKWRNAMNNEMEAIEKNNTWELTDLPTGAKTIGLKWIFK 308

Query: 291 TKYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLD 112
           TK NE GE++K+KARLVAKGY+Q+YGVDYTEVFAPVARWDTIR ++ALAA KGW V+QLD
Sbjct: 309 TKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALAAQKGWNVYQLD 368

Query: 111 VKSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           VKSAFLHGEL+E V+V+QPQGY K+G +  VYKLK+A
Sbjct: 369 VKSAFLHGELNEQVFVDQPQGYVKKGDELKVYKLKRA 405


>gb|PRQ38020.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 610

 Score =  230 bits (587), Expect = 9e-70
 Identities = 107/156 (68%), Positives = 127/156 (81%)
 Frame = -3

Query: 468 NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
           N A F    DP  F+EA    KWR AMK+++EAIERN TWEL+  P  V+ IGVKW+FKT
Sbjct: 89  NLAVFTTNEDPMDFEEAVSQSKWRLAMKKEIEAIERNNTWELIDWPLGVKTIGVKWVFKT 148

Query: 288 KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
           KYNEKGE+DK KARLVAKGYAQ +G+DYTEV+APVARWDTIR I+ALAA K W ++QLDV
Sbjct: 149 KYNEKGEVDKCKARLVAKGYAQRFGIDYTEVYAPVARWDTIRMIIALAAQKNWSIYQLDV 208

Query: 108 KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           KSAFLHGEL+E V+VEQPQG+  +GG++ VYKLKKA
Sbjct: 209 KSAFLHGELTEAVFVEQPQGFEVKGGENKVYKLKKA 244


>gb|KZV40714.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dorcoceras hygrometricum]
          Length = 536

 Score =  228 bits (581), Expect = 1e-69
 Identities = 104/156 (66%), Positives = 127/156 (81%)
 Frame = -3

Query: 468 NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
           +Y AF   +DPT F+EA+KH+KWR+AM  ++ +IE+N+TW L+S P   + IGVKW++KT
Sbjct: 10  DYLAFMIISDPTNFEEASKHQKWRKAMDAEISSIEKNQTWSLISLPDGAKAIGVKWIYKT 69

Query: 288 KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
           K NE GE+DK KARLV KGY QEYGVDY+EVFAPVAR DT+R ILA+AAHKGW V+QLDV
Sbjct: 70  KLNELGEVDKFKARLVVKGYTQEYGVDYSEVFAPVARMDTVRMILAVAAHKGWGVYQLDV 129

Query: 108 KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           KSAFLHG+L ED+YVEQPQGY   G K +VYKL KA
Sbjct: 130 KSAFLHGKLEEDIYVEQPQGYEVSGKKEMVYKLHKA 165


>gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifolium pratense]
          Length = 575

 Score =  229 bits (583), Expect = 2e-69
 Identities = 105/157 (66%), Positives = 128/157 (81%)
 Frame = -3

Query: 471 RNYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFK 292
           +N   F   +DPTTF+EA K EKWR AM  ++EAIE+N TWEL   P   + IG+KW+FK
Sbjct: 65  QNLVMFTVASDPTTFEEAVKSEKWRNAMNNEMEAIEKNNTWELTDLPTGAKTIGLKWIFK 124

Query: 291 TKYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLD 112
           TK NE GE++K+KARLVAKGY+Q+YGVDYTEVFAPVARWDTIR ++ALAA KGW V+QLD
Sbjct: 125 TKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALAAQKGWNVYQLD 184

Query: 111 VKSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           VKSAFLHGEL+E V+V+QPQGY K+G +  VYKLK+A
Sbjct: 185 VKSAFLHGELNEQVFVDQPQGYVKKGDELKVYKLKRA 221


>gb|PNX85850.1| hypothetical protein L195_g041924 [Trifolium pratense]
          Length = 477

 Score =  226 bits (576), Expect = 2e-69
 Identities = 104/152 (68%), Positives = 125/152 (82%)
 Frame = -3

Query: 456 FAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKTKYNE 277
           F   +DPTTF+EA K EKWR AM  ++EAIE+N TWEL   P   + IG+KW+FKTK NE
Sbjct: 2   FTVASDPTTFEEAVKSEKWRNAMNNEMEAIEKNNTWELTDLPTGAKTIGLKWIFKTKLNE 61

Query: 276 KGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDVKSAF 97
            GE++K+KARLVAKGY+Q+YGVDYTEVFAPVARWDTIR ++ALAA KGW V+QLDVKSAF
Sbjct: 62  NGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALAAQKGWSVYQLDVKSAF 121

Query: 96  LHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           LHGEL+E V+V+QPQGY K+G    VY+LKKA
Sbjct: 122 LHGELNEAVFVDQPQGYVKKGDTVKVYRLKKA 153


>dbj|GAU31929.1| hypothetical protein TSUD_271130, partial [Trifolium subterraneum]
          Length = 541

 Score =  228 bits (580), Expect = 2e-69
 Identities = 108/157 (68%), Positives = 127/157 (80%)
 Frame = -3

Query: 471 RNYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFK 292
           +N A +   NDP +F EA K + WR+AM Q++EAIE N TWEL + P     IGVKW++K
Sbjct: 14  QNLAVYTTNNDPKSFGEAEKLDVWRKAMDQEMEAIENNMTWELTTLPDKANTIGVKWVYK 73

Query: 291 TKYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLD 112
           TKYNEKGEI+KHKARLVAKGY+Q++G+DY EVFAPVARWDTIR ILALAA + W VFQLD
Sbjct: 74  TKYNEKGEIEKHKARLVAKGYSQKHGIDYDEVFAPVARWDTIRAILALAAKENWKVFQLD 133

Query: 111 VKSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           VKSAFLHGEL+ED+YVEQP GY K G K +VYKLKKA
Sbjct: 134 VKSAFLHGELTEDIYVEQPPGYQK-GNKDMVYKLKKA 169


>gb|KZV22085.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dorcoceras hygrometricum]
          Length = 536

 Score =  227 bits (578), Expect = 4e-69
 Identities = 104/156 (66%), Positives = 126/156 (80%)
 Frame = -3

Query: 468 NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
           +Y AF   +DPT F+EA KH+KWR+AM  ++ +IE+N+TW L+S P   + IGVKW++KT
Sbjct: 10  DYLAFMIISDPTNFEEAAKHQKWRKAMDAEISSIEKNQTWSLISLPDGAKAIGVKWIYKT 69

Query: 288 KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
           K NE GE+DK KARLV KGY QEYGVDY+EVFAPVAR DT+R ILA+AAHKGW V+QLDV
Sbjct: 70  KLNELGEVDKFKARLVVKGYTQEYGVDYSEVFAPVARMDTVRMILAVAAHKGWGVYQLDV 129

Query: 108 KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           KSAFLHG+L ED+YVEQPQGY   G K +VYKL KA
Sbjct: 130 KSAFLHGKLEEDIYVEQPQGYEVSGKKEMVYKLHKA 165


>gb|PNX58644.1| copia-type polyprotein [Trifolium pratense]
          Length = 274

 Score =  219 bits (557), Expect = 5e-69
 Identities = 102/156 (65%), Positives = 127/156 (81%)
 Frame = -3

Query: 468 NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
           N A F  + DP T++EA KH+ WR+ M  ++ AIE N TWEL + PA  + IGVKW++KT
Sbjct: 113 NLAIFTPSTDPITYEEACKHDTWRKVMDAEIAAIESNNTWELTALPAGTKKIGVKWIYKT 172

Query: 288 KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
           KYNE+G+I+K+KARLVAKGY+Q+ G+DY EVFAPVARWDTIRTILA+AA K W VFQLDV
Sbjct: 173 KYNEQGKIEKYKARLVAKGYSQQQGIDYNEVFAPVARWDTIRTILAIAALKNWYVFQLDV 232

Query: 108 KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           KSAFLHGEL+E+VYV+QP GY K+  K LVY+LKK+
Sbjct: 233 KSAFLHGELNEEVYVDQPLGYQKE-NKQLVYRLKKS 267


>gb|PNX88393.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 273

 Score =  217 bits (553), Expect = 2e-68
 Identities = 101/154 (65%), Positives = 126/154 (81%)
 Frame = -3

Query: 462 AAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKTKY 283
           A F+ + DP T+++A KHE W++AM  ++EAIE N+TWEL   P   + IGVKW++KTKY
Sbjct: 116 AFFSPSEDPITYNDAAKHEVWKKAMDTEIEAIESNDTWELTHLPTGAKKIGVKWVYKTKY 175

Query: 282 NEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDVKS 103
           NE+G+I+KHKARLVAKGY+Q++G+DY EVFAPVARWDTIRTILA+AA   W VFQLDVKS
Sbjct: 176 NEEGKIEKHKARLVAKGYSQQHGIDYNEVFAPVARWDTIRTILAIAATNNWYVFQLDVKS 235

Query: 102 AFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           AFLHGEL E VYVEQP GY K+  K +VY+LKK+
Sbjct: 236 AFLHGELDETVYVEQPLGYQKE-KKEMVYRLKKS 268


>gb|PNX70305.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 213

 Score =  215 bits (547), Expect = 3e-68
 Identities = 103/156 (66%), Positives = 124/156 (79%)
 Frame = -3

Query: 468 NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
           N A ++  +DP  + EA K + WR AM Q++EAI+ N+TWEL + P     IGVKW++KT
Sbjct: 47  NLAIYSPADDPKNYAEAEKFDVWRTAMDQEIEAIKNNDTWELTTLPEGSNAIGVKWIYKT 106

Query: 288 KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
           KYNEKGEI+KHKARLVA+GY+Q+ G+DY EVFA VARWDTIR+ILALAA + W VFQLDV
Sbjct: 107 KYNEKGEIEKHKARLVAEGYSQKLGIDYNEVFALVARWDTIRSILALAAKEKWSVFQLDV 166

Query: 108 KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           KSAFLHGEL ED+YVEQP GY K GG + VYKLKKA
Sbjct: 167 KSAFLHGELVEDIYVEQPLGYQK-GGNNKVYKLKKA 201


>gb|PNX68054.1| hypothetical protein L195_g055961, partial [Trifolium pratense]
          Length = 248

 Score =  213 bits (543), Expect = 3e-67
 Identities = 100/149 (67%), Positives = 121/149 (81%)
 Frame = -3

Query: 447 TNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKTKYNEKGE 268
           +NDP T++EA K   W+ AM +++EAIERN TW+L   P + +VIGVKW++KTK NE+GE
Sbjct: 78  SNDPATYEEAVKSSTWKAAMDKEIEAIERNGTWKLTDLPRSAKVIGVKWIYKTKLNERGE 137

Query: 267 IDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDVKSAFLHG 88
           I+K+KARLVAKGYAQ YG DY EVFAPVARWDTIR++LA+AA +GW VFQLDVKSAFLHG
Sbjct: 138 IEKYKARLVAKGYAQRYGTDYKEVFAPVARWDTIRSLLAIAASRGWDVFQLDVKSAFLHG 197

Query: 87  ELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           EL E VYVEQP GY K G +  VY+L KA
Sbjct: 198 ELKETVYVEQPAGYVKAGREKQVYQLHKA 226


>gb|PNX87561.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 427

 Score =  218 bits (556), Expect = 6e-67
 Identities = 104/156 (66%), Positives = 123/156 (78%)
 Frame = -3

Query: 468 NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
           N A +    DP T+ EA K + WR AM Q++E+I  N TWEL + P     IGVKW+FKT
Sbjct: 34  NLATYTLAEDPKTYAEAEKQDVWRTAMDQEMESIINNNTWELTTLPEGSNAIGVKWIFKT 93

Query: 288 KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
           KYNE+GEI+KHKARLVAKGY Q++G+DY +VFAPVARWDTIRTILALAA + W VFQLDV
Sbjct: 94  KYNERGEIEKHKARLVAKGYTQKHGIDYNDVFAPVARWDTIRTILALAAKESWNVFQLDV 153

Query: 108 KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           KSAFLHG+L+ED+YVEQP GY K G K+ VYKLKKA
Sbjct: 154 KSAFLHGDLAEDIYVEQPLGYQK-GNKNNVYKLKKA 188


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  229 bits (585), Expect = 7e-67
 Identities = 104/156 (66%), Positives = 131/156 (83%)
 Frame = -3

Query: 468  NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
            N A F  ++DP++F+EA  H +WR AM+ ++EAIE N+TW+L S P  V+ IGVKW+FKT
Sbjct: 666  NLAVFTPSDDPSSFEEAVVHSRWREAMRAEIEAIETNDTWQLTSLPKGVKKIGVKWVFKT 725

Query: 288  KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
            KYNE G++DK KARLVAKGYAQ++G+DYTEV+APVARWDTIR I+ALAA K W +FQLDV
Sbjct: 726  KYNEHGKVDKCKARLVAKGYAQQFGIDYTEVYAPVARWDTIRLIVALAAQKNWTIFQLDV 785

Query: 108  KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
            KSAFLHGEL+EDVY+EQPQG+ ++G +  VYKLKKA
Sbjct: 786  KSAFLHGELNEDVYIEQPQGFEQKGEEEKVYKLKKA 821


>gb|PNX95204.1| copia-type polyprotein [Trifolium pratense]
          Length = 1328

 Score =  229 bits (584), Expect = 1e-66
 Identities = 107/156 (68%), Positives = 129/156 (82%)
 Frame = -3

Query: 468  NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
            N A F    DPTTFDEA KHE WR+AM Q++E IE N+TWEL   P+  + IGVKW++KT
Sbjct: 807  NLAVFCNNTDPTTFDEAVKHEVWRKAMDQEIECIESNDTWELTELPSGSKKIGVKWIYKT 866

Query: 288  KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
            K NEKG+++K+KARLVAKGY+Q+YG+D+ EVFAPVARWDTIRT+L++AA + W V+QLDV
Sbjct: 867  KLNEKGKVEKYKARLVAKGYSQQYGIDFKEVFAPVARWDTIRTVLSIAASESWTVYQLDV 926

Query: 108  KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
            KSAFLHGELSEDVYV+QP GY K G KS VYKLKKA
Sbjct: 927  KSAFLHGELSEDVYVDQPLGYQK-GKKSQVYKLKKA 961


>gb|KYP42103.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 202

 Score =  209 bits (533), Expect = 2e-66
 Identities = 96/152 (63%), Positives = 120/152 (78%)
 Frame = -3

Query: 456 FAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKTKYNE 277
           +    DP  ++EA K EKWR AM  +++AIE+N+TWEL+  P  V+ +GVKW++KTK NE
Sbjct: 12  YVSVADPLYYEEAIKSEKWRNAMDAEIKAIEKNDTWELIDRPKGVKTVGVKWVYKTKLNE 71

Query: 276 KGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDVKSAF 97
           KGE+DK KARLV KGYAQ+YG+DYTEVFAPVAR DT+R ++ALA  KGW + QLDVKSAF
Sbjct: 72  KGEVDKFKARLVVKGYAQQYGIDYTEVFAPVARMDTVRLVIALATQKGWVIHQLDVKSAF 131

Query: 96  LHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
           LH EL EDV+VEQP GY ++G +  VYKLKKA
Sbjct: 132 LHEELVEDVFVEQPCGYIQKGKEEKVYKLKKA 163


>dbj|GAU21581.1| hypothetical protein TSUD_35440 [Trifolium subterraneum]
          Length = 1283

 Score =  228 bits (580), Expect = 4e-66
 Identities = 108/157 (68%), Positives = 127/157 (80%)
 Frame = -3

Query: 471  RNYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFK 292
            +N A +   NDP +F EA K + WR+AM Q++EAIE N TWEL + P     IGVKW++K
Sbjct: 756  QNLAVYTTNNDPKSFGEAEKLDVWRKAMDQEMEAIENNMTWELTTLPDRANTIGVKWVYK 815

Query: 291  TKYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLD 112
            TKYNEKGEI+KHKARLVAKGY+Q++G+DY EVFAPVARWDTIR ILALAA + W VFQLD
Sbjct: 816  TKYNEKGEIEKHKARLVAKGYSQKHGIDYDEVFAPVARWDTIRVILALAAKENWKVFQLD 875

Query: 111  VKSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
            VKSAFLHGEL+ED+YVEQP GY K G K +VYKLKKA
Sbjct: 876  VKSAFLHGELTEDIYVEQPPGYQK-GNKDMVYKLKKA 911


>gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1302

 Score =  227 bits (578), Expect = 7e-66
 Identities = 105/156 (67%), Positives = 125/156 (80%)
 Frame = -3

Query: 468  NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
            N   F    DP TF+EA K  KW+ AM Q++EAIERN TWEL + PA  + IGVKW+FKT
Sbjct: 803  NVVMFTSVTDPATFEEAFKSAKWKAAMDQEIEAIERNHTWELTTLPAGAKTIGVKWIFKT 862

Query: 288  KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
            K NE GE+DK KARLVAKGYAQ+YG+DYTEVFAPVARWDTIR ++ALAA KGW V+QLDV
Sbjct: 863  KLNENGEVDKCKARLVAKGYAQQYGIDYTEVFAPVARWDTIRMVIALAAQKGWKVYQLDV 922

Query: 108  KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
            KSAFLHGEL+E ++++QPQGY K+G +  VYKL KA
Sbjct: 923  KSAFLHGELTEAIFIDQPQGYVKKGDELKVYKLNKA 958


>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1316

 Score =  227 bits (578), Expect = 7e-66
 Identities = 106/156 (67%), Positives = 125/156 (80%)
 Frame = -3

Query: 468  NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
            N   F    DPTTF+EA K  KW+ AM Q++EAIERN TWEL   PA  + IGVKW+FKT
Sbjct: 795  NIVMFTSVTDPTTFEEAFKSAKWKAAMDQEIEAIERNHTWELTILPAGAKTIGVKWIFKT 854

Query: 288  KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
            K NE GE++K KARLVAKGYAQ+YG+DYTEVFAPVARWDTIR ++ALAA KGW V+QLDV
Sbjct: 855  KLNENGEVEKCKARLVAKGYAQQYGIDYTEVFAPVARWDTIRMVIALAAQKGWKVYQLDV 914

Query: 108  KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
            KSAFLHGEL+E V+++QPQGY K+G +  VYKL KA
Sbjct: 915  KSAFLHGELTEAVFIDQPQGYVKEGDELKVYKLNKA 950


>gb|PNX94698.1| copia-type polyprotein [Trifolium pratense]
          Length = 1324

 Score =  226 bits (577), Expect = 9e-66
 Identities = 106/156 (67%), Positives = 129/156 (82%)
 Frame = -3

Query: 468  NYAAFAETNDPTTFDEANKHEKWRRAMKQDLEAIERNETWELVSPPANVRVIGVKWLFKT 289
            N A F+   DPTT+DEA+K E WR+AM Q++E+IE N+TW+L S P   + IGVKW++KT
Sbjct: 805  NLAVFSTNGDPTTYDEAHKQEVWRKAMDQEIESIENNKTWKLTSLPQGAKTIGVKWIYKT 864

Query: 288  KYNEKGEIDKHKARLVAKGYAQEYGVDYTEVFAPVARWDTIRTILALAAHKGWCVFQLDV 109
            KYNEKGE++K+KARLVAKGY+Q+YG+DY EVFAPVARWDTIRT+L +AA KGW V QLDV
Sbjct: 865  KYNEKGEVEKYKARLVAKGYSQQYGIDYNEVFAPVARWDTIRTLLCIAASKGWEVHQLDV 924

Query: 108  KSAFLHGELSEDVYVEQPQGYHKQGGKSLVYKLKKA 1
            KSAFLHGEL+EDVYVEQP GY +   K  VYKL+KA
Sbjct: 925  KSAFLHGELTEDVYVEQPLGY-QTTEKDKVYKLQKA 959