BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00018567
         (973 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense]           160   2e-63
dbj|GAU35685.1| hypothetical protein TSUD_162570 [Trifolium subt...   153   4e-60
dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subt...   128   2e-57
dbj|GAU22731.1| hypothetical protein TSUD_138560 [Trifolium subt...   126   2e-56
dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subte...   152   4e-55
gb|PNY01679.1| ribonuclease H, partial [Trifolium pratense]           104   8e-54
dbj|GAU51664.1| hypothetical protein TSUD_268670 [Trifolium subt...    94   4e-50
gb|KYP32892.1| Putative ribonuclease H protein At1g65750 family ...    84   6e-43
gb|KYP43190.1| Putative ribonuclease H protein At1g65750 family ...    85   3e-42
gb|PNX92765.1| ribonuclease H [Trifolium pratense]                    127   9e-42
dbj|GAU47648.1| hypothetical protein TSUD_27720 [Trifolium subte...   107   4e-41
dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subt...   153   7e-41
gb|PNX84261.1| ribonuclease H, partial [Trifolium pratense]           159   1e-40
ref|XP_020981606.1| uncharacterized protein LOC110273076 [Arachi...    93   1e-40
dbj|GAU21723.1| hypothetical protein TSUD_328480 [Trifolium subt...   146   2e-40
gb|PNY04054.1| ribonuclease H, partial [Trifolium pratense]            96   2e-40
dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subt...   159   7e-40
gb|PNY07262.1| ribonuclease H [Trifolium pratense]                    155   1e-39
gb|KYP38975.1| Putative ribonuclease H protein At1g65750 family ...    85   2e-39
dbj|GAU26057.1| hypothetical protein TSUD_225190 [Trifolium subt...   124   3e-39

>gb|PNY15195.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1142

 Score =  138 bits (347), Expect(2) = 2e-63
 Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 20/134 (14%)
 Frame = +2

Query: 599  F*VQIRDGMSSFWFSNWSEVGTLSN--------------------GQWNFNLLYTSIPSA 718
            F  ++ +G SSFWFSNWS  G L++                    G WNFN+LYT+IP+A
Sbjct: 871  FEFRLGNGNSSFWFSNWSGTGKLADKVLYVDIHDLEMSVKDVYTDGNWNFNMLYTNIPTA 930

Query: 719  ICERIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKV 898
            + + +K+ P+CLNS+VAD +T KGNL+GIY+A+  Y WL R E A +   S+SW WLW +
Sbjct: 931  VTDHLKMIPVCLNSQVADCYTWKGNLNGIYSARDGYFWLNRNEFAGNDTDSISWTWLWNI 990

Query: 899  PGPEKIKFLIWTAM 940
              PEK+KF +WTA+
Sbjct: 991  SAPEKLKFFLWTAL 1004



 Score =  134 bits (337), Expect(2) = 2e-63
 Identities = 61/92 (66%), Positives = 74/92 (80%), Gaps = 5/92 (5%)
 Frame = +3

Query: 363  HLVGWDK-----KLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFL 527
            HLV WDK     KLGGLGIRK+REANT +LGKLVW +H+  D LWVQV+K KY+ N +F+
Sbjct: 787  HLVSWDKITRPKKLGGLGIRKSREANTALLGKLVWSIHQNCDSLWVQVLKHKYINNGSFI 846

Query: 528  DLSKKPGSVTWNSIMKAKIVLRDGFEFKLGMG 623
             ++KKPGSVTWN+IMKA + LRDGFEF+LG G
Sbjct: 847  TMTKKPGSVTWNAIMKALLALRDGFEFRLGNG 878



 Score =  160 bits (406), Expect = 3e-40
 Identities = 79/130 (60%), Positives = 97/130 (74%)
 Frame = +1

Query: 1    LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
            LK+N                M  IV++TGI RT SLEKYLGFPM+HGRL+RKDYEFLEEK
Sbjct: 663  LKVNATKSKVFFSSSTKRGKMTSIVTSTGISRTHSLEKYLGFPMMHGRLQRKDYEFLEEK 722

Query: 181  VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
            ++ RL  SW++ LLNKAGR+TLVKSVLNSIP YYMQ+  LPQSTC  ID+ +RNF+WKGN
Sbjct: 723  ISHRL-ASWQHNLLNKAGRMTLVKSVLNSIPNYYMQVAWLPQSTCETIDRMARNFLWKGN 781

Query: 361  STSWVGIRNW 390
            S++ V + +W
Sbjct: 782  SSTGVHLVSW 791


>dbj|GAU35685.1| hypothetical protein TSUD_162570 [Trifolium subterraneum]
          Length = 1375

 Score =  139 bits (351), Expect(2) = 4e-60
 Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 20/134 (14%)
 Frame = +2

Query: 599  F*VQIRDGMSSFWFSNWSEVGTLS--------------------NGQWNFNLLYTSIPSA 718
            F  ++ DG SSFW+SNWS +G L+                    N +WNFNLLYT+IP+ 
Sbjct: 1059 FQFRLGDGNSSFWYSNWSGIGNLADQVPYVDIHDLQMRVRDVYTNNKWNFNLLYTTIPAD 1118

Query: 719  ICERIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKV 898
            + + +K  P+CLNS+V DR+T KGNL+G+YTAK  Y WL R   + +    +SWNW+W +
Sbjct: 1119 VMDHVKRLPVCLNSQVVDRYTWKGNLNGLYTAKEGYYWLNRFAFSDTDTDDISWNWVWHI 1178

Query: 899  PGPEKIKFLIWTAM 940
            P PEKIKF IW+A+
Sbjct: 1179 PAPEKIKFFIWSAL 1192



 Score =  121 bits (304), Expect(2) = 4e-60
 Identities = 56/92 (60%), Positives = 70/92 (76%), Gaps = 5/92 (5%)
 Frame = +3

Query: 363  HLVGWDK-----KLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFL 527
            HLVGWDK     KLGGLGIRKARE NT +LGKLVW +H+  D LWVQV++ KY+ +  F 
Sbjct: 975  HLVGWDKITKPKKLGGLGIRKAREVNTSLLGKLVWHMHQNCDTLWVQVLRHKYLNDDMFF 1034

Query: 528  DLSKKPGSVTWNSIMKAKIVLRDGFEFKLGMG 623
             ++KK GS+TWN+IMKA   L+DGF+F+LG G
Sbjct: 1035 SITKKSGSITWNAIMKALQALKDGFQFRLGDG 1066



 Score =  153 bits (387), Expect = 1e-37
 Identities = 74/130 (56%), Positives = 97/130 (74%)
 Frame = +1

Query: 1    LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
            LK+NV+              ++ IV++TGI RT SLEKYLGFPM+HGRL R+D+EFLEEK
Sbjct: 851  LKVNVSKSKVFFSPSTPRGKINSIVTHTGINRTHSLEKYLGFPMMHGRLRRRDFEFLEEK 910

Query: 181  VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
            ++QRL  SW++ LLNKAGR+TLVKSVLNSIP YYMQ+  LPQ+TC+ ID+ +R+F+WKG 
Sbjct: 911  ISQRL-ASWQHNLLNKAGRMTLVKSVLNSIPNYYMQVAWLPQTTCDSIDRMTRSFLWKGA 969

Query: 361  STSWVGIRNW 390
            S   + +  W
Sbjct: 970  SNKGIHLVGW 979


>dbj|GAU50297.1| hypothetical protein TSUD_288310 [Trifolium subterraneum]
          Length = 545

 Score =  128 bits (321), Expect(2) = 2e-57
 Identities = 58/134 (43%), Positives = 83/134 (61%), Gaps = 20/134 (14%)
 Frame = +2

Query: 599 F*VQIRDGMSSFWFSNWSEVGTLSN--------------------GQWNFNLLYTSIPSA 718
           F  ++ DG SSFW+ NW  +G L++                     +WNFNLLYT+IP+ 
Sbjct: 116 FQFRLGDGNSSFWYLNWLGIGNLADQVPYVDIHDLQMRVRDVYTDNKWNFNLLYTTIPAD 175

Query: 719 ICERIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKV 898
           + + +K  P+CLNS+V DR+T KGNL+G+YTAK  Y WL R   + ++   +SWN +W +
Sbjct: 176 VMDHLKRLPVCLNSQVVDRYTWKGNLNGLYTAKEGYYWLNRFSFSDTATDDISWNSVWHI 235

Query: 899 PGPEKIKFLIWTAM 940
           P PEKIKF IW+A+
Sbjct: 236 PAPEKIKFFIWSAL 249



 Score =  124 bits (312), Expect(2) = 2e-57
 Identities = 56/92 (60%), Positives = 72/92 (78%), Gaps = 5/92 (5%)
 Frame = +3

Query: 363 HLVGWDK-----KLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFL 527
           HLVGWDK     KLGGLGIRKAREANT +LGKLVW +H+  D  W+Q+++ KY+ +  FL
Sbjct: 32  HLVGWDKITKPKKLGGLGIRKAREANTSLLGKLVWHMHQNCDTFWLQILRHKYLNDDMFL 91

Query: 528 DLSKKPGSVTWNSIMKAKIVLRDGFEFKLGMG 623
            ++KKPGS+TWN+IMKA   L+DGF+F+LG G
Sbjct: 92  SITKKPGSITWNAIMKALQALKDGFQFRLGDG 123


>dbj|GAU22731.1| hypothetical protein TSUD_138560 [Trifolium subterraneum]
          Length = 385

 Score =  126 bits (316), Expect(2) = 2e-56
 Identities = 60/134 (44%), Positives = 79/134 (58%), Gaps = 20/134 (14%)
 Frame = +2

Query: 599 F*VQIRDGMSSFWFSNWSEVGTLSN--------------------GQWNFNLLYTSIPSA 718
           F  ++ DG SSFW++NWS  G L+N                    G++N N LYT IP  
Sbjct: 100 FQFRLGDGNSSFWYTNWSGCGILANQVMYVDIHDLQMRVRDVYIYGKFNLNSLYTHIPPE 159

Query: 719 ICERIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKV 898
           I   + L P+CLN  VADR+T KGNL+G+YTA+  Y WL R +   SS   +SW+WLW +
Sbjct: 160 IVNHLNLLPVCLNPRVADRYTWKGNLNGLYTAQDGYHWLNRVKPTNSSTKDISWSWLWHI 219

Query: 899 PGPEKIKFLIWTAM 940
             PEKIKF +WTA+
Sbjct: 220 EAPEKIKFFLWTAL 233



 Score =  123 bits (308), Expect(2) = 2e-56
 Identities = 57/92 (61%), Positives = 73/92 (79%), Gaps = 5/92 (5%)
 Frame = +3

Query: 363 HLVGWDK-----KLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFL 527
           +LVGWDK       GGLGIRKAREANT +LGKLVW++H+  D LWVQ++K KYVK+  F+
Sbjct: 16  NLVGWDKITKPKNKGGLGIRKAREANTALLGKLVWNIHQDKDVLWVQIMKHKYVKDDIFI 75

Query: 528 DLSKKPGSVTWNSIMKAKIVLRDGFEFKLGMG 623
            ++KK GSVTWNSIMKA + ++DGF+F+LG G
Sbjct: 76  TITKKQGSVTWNSIMKALLAIKDGFQFRLGDG 107


>dbj|GAU35042.1| hypothetical protein TSUD_30080 [Trifolium subterraneum]
          Length = 724

 Score =  123 bits (308), Expect(2) = 4e-55
 Identities = 56/92 (60%), Positives = 72/92 (78%), Gaps = 5/92 (5%)
 Frame = +3

Query: 363 HLVGWDK-----KLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFL 527
           HLVGWDK     KLGGLGIRK REANT +LGKLVW++H+ ++ LWVQVI+ KY+K    L
Sbjct: 230 HLVGWDKTTKPKKLGGLGIRKLREANTSLLGKLVWNIHQNNEALWVQVIRHKYIKGEVLL 289

Query: 528 DLSKKPGSVTWNSIMKAKIVLRDGFEFKLGMG 623
           +++KKPG VTWN+IMKA   L++G+ F+LG G
Sbjct: 290 NITKKPGLVTWNAIMKALSALKEGYHFRLGNG 321



 Score =  121 bits (304), Expect(2) = 4e-55
 Identities = 59/131 (45%), Positives = 75/131 (57%), Gaps = 20/131 (15%)
 Frame = +2

Query: 608 QIRDGMSSFWFSNWSEVGTLSN--------------------GQWNFNLLYTSIPSAICE 727
           ++ +G SSFWF+NWS  G L+N                    G WNFN LYT++P  I E
Sbjct: 317 RLGNGNSSFWFTNWSGSGVLANQVMYVDIHDLEMRVRDVYIDGIWNFNALYTALPMEIKE 376

Query: 728 RIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKVPGP 907
           R+   PICLN  + D +T KGNL GIYTA   Y WL R   + +    +SW+WLW +P P
Sbjct: 377 RLISFPICLNPSINDCYTWKGNLQGIYTAWDGYHWLNRNAFSANPTSVVSWSWLWHLPAP 436

Query: 908 EKIKFLIWTAM 940
           EKIKF IWT +
Sbjct: 437 EKIKFFIWTLL 447



 Score =  152 bits (384), Expect = 1e-37
 Identities = 73/130 (56%), Positives = 99/130 (76%)
 Frame = +1

Query: 1   LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
           LK+N++              +  IV++TGI RTLSLEKYLGFPM+HGRL+R+D+ FLEEK
Sbjct: 106 LKVNISKSKVFFSSTTRRGKISSIVASTGINRTLSLEKYLGFPMMHGRLQRRDFAFLEEK 165

Query: 181 VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
           ++++L  SW+++LLNKAGR+TLVKSVLNSIP YYMQI  LPQ+T + IDK +RNF+WKG+
Sbjct: 166 ISKKL-ASWQHRLLNKAGRLTLVKSVLNSIPNYYMQITWLPQTTSDSIDKMARNFLWKGS 224

Query: 361 STSWVGIRNW 390
           S + + +  W
Sbjct: 225 SNTGIHLVGW 234


>gb|PNY01679.1| ribonuclease H, partial [Trifolium pratense]
          Length = 995

 Score =  104 bits (260), Expect(3) = 8e-54
 Identities = 51/130 (39%), Positives = 80/130 (61%)
 Frame = +1

Query: 1    LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
            LK+++A               D I + + I  T   E+YLGF M +G++ ++D+  + ++
Sbjct: 643  LKVSLAKSKFCTSTGVNRQLRDRIAATSQIHATDRFERYLGFKMFYGKVTKQDFSDIYDR 702

Query: 181  VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
            V+ +L  SWK++LLNK GRV L  SV++S+P+Y+MQI  LPQS C+ +D+T R FIWKG 
Sbjct: 703  VSAKL-ASWKSRLLNKPGRVVLANSVISSLPSYHMQINWLPQSMCDELDRTVRRFIWKGT 761

Query: 361  STSWVGIRNW 390
              S + +  W
Sbjct: 762  GDSGMFLVGW 771



 Score = 86.7 bits (213), Expect(3) = 8e-54
 Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
 Frame = +3

Query: 366  LVGWDK-----KLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFLD 530
            LVGW+K     + GGLG+R AR  N  +LGKLVW++    DKLWV++ ++KY+K     +
Sbjct: 768  LVGWNKITQPRRFGGLGVRIARLQNVSLLGKLVWEILHSPDKLWVKLFEEKYLKGRLVFN 827

Query: 531  LSKKPGSVTWNSIMKAKIVLRDGFEFKLGMG 623
             S   GS  WNS++KA  +L+DGF  K+G G
Sbjct: 828  TSIVGGSFIWNSLVKALQMLKDGFTLKIGNG 858



 Score = 70.1 bits (170), Expect(3) = 8e-54
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 20/134 (14%)
 Frame = +2

Query: 599  F*VQIRDGMSSFWFSNWSEVGTL--------------------SNGQWNFNLLYTSIPSA 718
            F ++I +G S+FW+ +W     L                    SNG+WN N LYT +P+ 
Sbjct: 851  FTLKIGNGNSNFWYDSWVFKEKLCSFVPFVAIHDTTVKINDVWSNGKWNLNNLYTILPTV 910

Query: 719  ICERIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKV 898
            + + I      +  ++ D +T   +  G++TAK AY WL    L +S+ V  +W W+W++
Sbjct: 911  VTDAILQIQPYMVDDLPDVWTWHNSSTGMFTAKDAYEWLLH-PLPISNQV--NWKWIWQL 967

Query: 899  PGPEKIKFLIWTAM 940
              P  I+F +W  +
Sbjct: 968  QLPANIQFFVWQVL 981


>dbj|GAU51664.1| hypothetical protein TSUD_268670 [Trifolium subterraneum]
          Length = 1231

 Score = 94.4 bits (233), Expect(3) = 4e-50
 Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
 Frame = +3

Query: 333  VKKFYMER*FHLVGWDKKL-----GGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIK 497
            +  +YM+   HLVGWDK       GGLGIR AREAN  +LGKLVWD+ + S+KLWV ++ 
Sbjct: 836  IPNYYMQG-IHLVGWDKIARPKIQGGLGIRPAREANICLLGKLVWDMVQSSNKLWVNLLS 894

Query: 498  QKYVKNATFLDLSK-KPGSVTWNSIMKAKIVLRDGFEFKLGMG 623
            +KY   +T L  S     S  W+SI++AK +L+DGF ++ G G
Sbjct: 895  KKYTTGSTILQASSLSNASPIWSSIIRAKNILKDGFTWRAGSG 937



 Score = 89.4 bits (220), Expect(3) = 4e-50
 Identities = 46/96 (47%), Positives = 61/96 (63%)
 Frame = +1

Query: 1    LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
            LKIN++              +  + S +GIR T SL+KYLGFP++ GR +R D+ F+  K
Sbjct: 748  LKINLSKSRAFYSIGTPSTKITKLTSISGIRSTTSLDKYLGFPILKGRAKRSDFHFIINK 807

Query: 181  VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQ 288
            +  RL  SWKN+LLNK GR+ L  SVL+SIP YYMQ
Sbjct: 808  MQSRL-ASWKNRLLNKPGRLALASSVLSSIPNYYMQ 842



 Score = 65.5 bits (158), Expect(3) = 4e-50
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
 Frame = +2

Query: 620  GMSSFWFSNWSEVG--------------------TLSNGQWNFNLLYTSIPSAICERIKL 739
            G SSFWFS WS +G                     L++   +  +LYT +P +  + I  
Sbjct: 937  GSSSFWFSPWSSLGYLGTLVPYVDIHDLHLTVKDVLASNSPHSQILYTQLPPSASDLINN 996

Query: 740  TPICLNSEVADRFT*KGNLDGIYTAKAAYSW-LTRTELAVSSGVSLSWNWLWKVPGP 907
              I  N  + D F    N +G YT K+ YSW L++   A +  + LSW W+WK+  P
Sbjct: 997  LNIRFNDSIDDVFIWSNNKNGSYTTKSGYSWLLSQNGSATTPSLPLSWTWIWKLHLP 1053


>gb|KYP32892.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 500

 Score = 84.3 bits (207), Expect(3) = 6e-43
 Identities = 41/101 (40%), Positives = 67/101 (66%)
 Frame = +1

Query: 88  IRRTLSLEKYLGFPMIHGRLERKDYEFLEEKVTQRLLGSWKNKLLNKAGRVTLVKSVLNS 267
           +R T +L +YLGF + +GR +R+D+  + EK  QRL  +WK KLLN+AG++ L+KSV++S
Sbjct: 1   MRITTNLGRYLGFSLPNGRPQRRDFLHILEKTNQRL-AAWKLKLLNRAGKLCLIKSVVSS 59

Query: 268 IPTYYMQIGCLPQSTCNFIDKTSRNFIWKGNSTSWVGIRNW 390
           +  Y MQ+  LP+  C+ ++K+ R F+W  N   +  +  W
Sbjct: 60  LLVYSMQVNWLPKGLCSDLEKSMRRFLW-ANKDRFQALVGW 99



 Score = 70.5 bits (171), Expect(3) = 6e-43
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
 Frame = +3

Query: 366 LVGWD-----KKLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFLD 530
           LVGWD     K +GGLGI+  R  N  +LGKL+W +    DK WV+V+  KY+K  + L+
Sbjct: 96  LVGWDLVTTDKGVGGLGIKDLRLMNLALLGKLIWSMLHDHDKPWVEVLSSKYLKGDSILN 155

Query: 531 LSKKPGSVT--WNSIMKAKIVLRDGFEFKLGMG 623
            +K P S +  W+SI+ A   LRDGF  KL  G
Sbjct: 156 -AKIPSSSSPAWHSILLALQELRDGFLPKLNDG 187



 Score = 70.1 bits (170), Expect(3) = 6e-43
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 20/128 (15%)
 Frame = +2

Query: 608 QIRDGMSSFWFSNWSEVGTL--------------------SNGQWNFNLLYTSIPSAICE 727
           ++ DG SS W+ +W+ +G L                    ++  WNFN L T +PS + +
Sbjct: 183 KLNDGRSSLWYKDWTGLGCLCKLVDYVHISDTHLKVLDVYTDDSWNFNCLRTQLPSQLLD 242

Query: 728 RIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKVPGP 907
           ++   P   N    D F    +  G+Y+ ++AY+ L  T     +  ++ W  +WK   P
Sbjct: 243 QLSSFPGPSNISAQDCFVWSASTSGVYSTRSAYALLKGT-----TNDTIQWRKVWKSKLP 297

Query: 908 EKIKFLIW 931
           EKIKFL+W
Sbjct: 298 EKIKFLLW 305


>gb|KYP43190.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 509

 Score = 85.1 bits (209), Expect(3) = 3e-42
 Identities = 46/117 (39%), Positives = 65/117 (55%)
 Frame = +1

Query: 1   LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
           LK+N+               ++ +    GI  T  + KYLG PM HG+    D+  + +K
Sbjct: 106 LKVNLTKSKFVSSRRVSQRRIETLEGLLGIGHTNRIGKYLGVPMTHGQPRCADFYDVMDK 165

Query: 181 VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIW 351
           +  RL  +WK+KLLNKAG++ LVKS + SIP Y MQ   LPQ+ CN ID+  R  +W
Sbjct: 166 IQGRL-AAWKSKLLNKAGKLCLVKSTICSIPVYSMQTLWLPQAVCNRIDQACRRMLW 221



 Score = 69.7 bits (169), Expect(3) = 3e-42
 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
 Frame = +3

Query: 369 VGWDK-----KLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFLDL 533
           V WD        GGLG+R+AR  N  +LGKL+WDL     K WV ++   Y+   + L  
Sbjct: 233 VSWDVVTQPLTFGGLGVREARRVNVSLLGKLIWDLLTAPQKPWVHILSNIYLHGESILCA 292

Query: 534 SKKPG-SVTWNSIMKAKIVLRDGFEFKLGMG 623
             + G S TW+S++K    LR+GFE  LG G
Sbjct: 293 QNRRGASPTWSSLIKVLPSLREGFEPHLGSG 323



 Score = 67.8 bits (164), Expect(3) = 3e-42
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 20/124 (16%)
 Frame = +2

Query: 620 GMSSFWFSNWSEVGTLS--------------------NGQWNFNLLYTSIPSAICERIKL 739
           G SS W+++WS  G                       +G W+F  LYT+IP+ +   ++ 
Sbjct: 323 GASSLWYTDWSGAGLWCGRVPFVHIADTNRTVADCWVSGHWDFTSLYTAIPAELIHSVQR 382

Query: 740 TPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKVPGPEKIK 919
             +  +S   D F  +G+  G YTA + Y +LT         V   W  LWK+  PEK+K
Sbjct: 383 LTVATSSLELDHFAWRGDSSGCYTAASGYRFLTTCLTTEGDEV---WKKLWKLMLPEKVK 439

Query: 920 FLIW 931
           F +W
Sbjct: 440 FFLW 443


>gb|PNX92765.1| ribonuclease H [Trifolium pratense]
          Length = 1310

 Score =  102 bits (253), Expect(2) = 9e-42
 Identities = 48/92 (52%), Positives = 65/92 (70%), Gaps = 5/92 (5%)
 Frame = +3

Query: 363  HLVGWD-----KKLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFL 527
            HLVGW      K  GGLGIR AREANT MLGKLVWD+ + S K WV +++ KY+++  F+
Sbjct: 797  HLVGWSSITQTKSDGGLGIRLAREANTAMLGKLVWDIQQNSPKPWVLMLRSKYLQHQPFI 856

Query: 528  DLSKKPGSVTWNSIMKAKIVLRDGFEFKLGMG 623
            +   +PGS  WNSI KAK++L DGF++++  G
Sbjct: 857  NAPTQPGSPIWNSISKAKMILADGFKYRVSDG 888



 Score = 98.2 bits (243), Expect(2) = 9e-42
 Identities = 54/133 (40%), Positives = 71/133 (53%), Gaps = 20/133 (15%)
 Frame = +2

Query: 599  F*VQIRDGMSSFWFSNW-------SEVGTLS-------------NGQWNFNLLYTSIPSA 718
            F  ++ DG S FW+S W       +EV  ++             N  W+ NLLYT + S 
Sbjct: 881  FKYRVSDGSSLFWYSPWLSHKLLGTEVDYVAIQDSQIRIKDIYFNDSWHLNLLYTPLSSE 940

Query: 719  ICERIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKV 898
            + ERI  T   LN+   D F  +GN+DGIY A + Y WL + +  V S    SWNW+WK+
Sbjct: 941  MKERITSTKFILNNGTIDCFIWQGNIDGIYNASSGYKWLLQQKYNVPS--IQSWNWIWKL 998

Query: 899  PGPEKIKFLIWTA 937
              PEKIKFLIW A
Sbjct: 999  QAPEKIKFLIWCA 1011



 Score =  127 bits (320), Expect = 7e-29
 Identities = 66/131 (50%), Positives = 82/131 (62%)
 Frame = +1

Query: 1    LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
            LKIN                 + + S + IR T S   YLGFPMI GR+ ++D+ F+ +K
Sbjct: 673  LKINCTKSRAFFSAGVTRRKREKLTSLSSIRSTNSFGNYLGFPMISGRVRKEDFNFILDK 732

Query: 181  VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
            +  RL  SWKNKLLNK GRVTL KSVLNSIPTYYMQI  LP S C  ID+ +RNFIWKG+
Sbjct: 733  LNSRL-ASWKNKLLNKPGRVTLAKSVLNSIPTYYMQISWLPSSICYQIDQMTRNFIWKGS 791

Query: 361  STSWVGIRNWA 393
            S   + +  W+
Sbjct: 792  SNKGIHLVGWS 802


>dbj|GAU47648.1| hypothetical protein TSUD_27720 [Trifolium subterraneum]
          Length = 521

 Score =  107 bits (268), Expect(2) = 4e-41
 Identities = 48/74 (64%), Positives = 58/74 (78%)
 Frame = +3

Query: 402 IRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFLDLSKKPGSVTWNSIMKAK 581
           ++KARE NT +LGKLVW  HK SD LWVQVIK KY+    FL + KKPGSVTWN+IMKA 
Sbjct: 84  VQKAREPNTSLLGKLVWSTHKNSDALWVQVIKHKYINEDLFLTIPKKPGSVTWNAIMKAL 143

Query: 582 IVLRDGFEFKLGMG 623
           + L+DGF+F+LG G
Sbjct: 144 LALKDGFQFRLGNG 157



 Score = 90.1 bits (222), Expect(2) = 4e-41
 Identities = 44/114 (38%), Positives = 68/114 (59%)
 Frame = +2

Query: 599 F*VQIRDGMSSFWFSNWSEVGTLSNGQWNFNLLYTSIPSAICERIKLTPICLNSEVADRF 778
           F  ++ +G SSFW+++WS +G L+N      +LY  I       I++  + ++    D F
Sbjct: 150 FQFRLGNGNSSFWYTDWSGIGILAN-----QVLYVDIHDI---EIRVRDVYID----DYF 197

Query: 779 T*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKVPGPEKIKFLIWTAM 940
             KGNL+G+YTA   Y WL R + + +    +SW+WLW +P PEKIKF +WTA+
Sbjct: 198 IWKGNLNGLYTAHDGYHWLNRNDFSENPTNVVSWSWLWHIPAPEKIKFFLWTAL 251


>dbj|GAU22350.1| hypothetical protein TSUD_106780 [Trifolium subterraneum]
          Length = 1200

 Score =  104 bits (260), Expect(2) = 7e-41
 Identities = 52/85 (61%), Positives = 63/85 (74%), Gaps = 6/85 (7%)
 Frame = +3

Query: 363  HLVGWDK-----KLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFL 527
            HLVGWDK     KLGGLGIRKAR+ANT +LGKLVW +H+ SD LWVQVIK KY+K    L
Sbjct: 760  HLVGWDKITKAKKLGGLGIRKARDANTSLLGKLVWSVHQNSDALWVQVIKHKYLKEENLL 819

Query: 528  D-LSKKPGSVTWNSIMKAKIVLRDG 599
            +  + + GSVTWN+I KA   L++G
Sbjct: 820  NSTNNRTGSVTWNAIRKALSALKEG 844



 Score = 92.4 bits (228), Expect(2) = 7e-41
 Identities = 41/90 (45%), Positives = 55/90 (61%)
 Frame = +2

Query: 671  NGQWNFNLLYTSIPSAICERIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTEL 850
            +G W FN LYT++   I E +    I LN  V D +T KGNL+GIYTA+  Y+WL R   
Sbjct: 870  DGMWLFNSLYTTLSQEIKENLNFITISLNPSVNDCYTWKGNLNGIYTARDGYAWLNRHSF 929

Query: 851  AVSSGVSLSWNWLWKVPGPEKIKFLIWTAM 940
            + ++    SW+WLW V  PEK+KF  WT +
Sbjct: 930  SATTISVASWSWLWHVSAPEKLKFFFWTML 959



 Score =  153 bits (387), Expect = 9e-38
 Identities = 76/130 (58%), Positives = 96/130 (73%)
 Frame = +1

Query: 1    LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
            LK+N                +  IV++TGI RTLSLEKYLG PM+HGRL+R+D+EFLEEK
Sbjct: 636  LKVNTNKSKVFFSSTTRNGKISSIVASTGINRTLSLEKYLGIPMMHGRLKRRDFEFLEEK 695

Query: 181  VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
            +++RL  SW++ LLNKAGR+TLVKSVLNSI  YYMQI  LPQ+TC+FIDK  RNFIWKG+
Sbjct: 696  ISKRL-DSWQHNLLNKAGRMTLVKSVLNSILNYYMQIAWLPQTTCDFIDKMGRNFIWKGS 754

Query: 361  STSWVGIRNW 390
            S + + +  W
Sbjct: 755  SDTGIHLVGW 764


>gb|PNX84261.1| ribonuclease H, partial [Trifolium pratense]
          Length = 574

 Score =  159 bits (402), Expect = 1e-40
 Identities = 78/130 (60%), Positives = 96/130 (73%)
 Frame = +1

Query: 1   LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
           LK+NV+              +  IV++TGI RT SLEKYLGFPM+H RL R+DYEFLEEK
Sbjct: 390 LKVNVSKSKVFFSSTTKRGKITSIVNSTGINRTYSLEKYLGFPMLHERLHRRDYEFLEEK 449

Query: 181 VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
           V+QRL  SWK+ LLNKAGR+TLVKSVLNSIP YYMQ+  LPQSTC+ ID+ +RNF+WKG 
Sbjct: 450 VSQRL-ASWKHNLLNKAGRMTLVKSVLNSIPNYYMQVAWLPQSTCDSIDRMARNFLWKGT 508

Query: 361 STSWVGIRNW 390
           S + + +  W
Sbjct: 509 SNTGINLVGW 518



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
 Frame = +3

Query: 363 HLVGWDK-----KLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFL 527
           +LVGWDK       GGLGIRK REANT +LGKLVW +H+  D LWVQ++K KYVK+  F+
Sbjct: 514 NLVGWDKITKPKSKGGLGIRKTREANTSLLGKLVWSIHQNKDALWVQIMKHKYVKDDVFI 573


>ref|XP_020981606.1| uncharacterized protein LOC110273076 [Arachis duranensis]
          Length = 1117

 Score = 93.2 bits (230), Expect(3) = 1e-40
 Identities = 51/122 (41%), Positives = 70/122 (57%)
 Frame = +1

Query: 1   LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
           LK+N+                +++   + IR    L KYLG  + H R  RK  + + EK
Sbjct: 484 LKVNLHKSKAQCSKRVSERRKEVLSGVSNIRFCNDLGKYLGINIGHARASRKTAQEVIEK 543

Query: 181 VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
           ++++L  SWK +LLNKAGR+ LVKSV+ SIP Y MQI  LP+  CN ID   R F+WKG 
Sbjct: 544 ISRKL-SSWKGRLLNKAGRLCLVKSVMASIPVYEMQISLLPKYACNKIDSLMRQFLWKGQ 602

Query: 361 ST 366
           +T
Sbjct: 603 AT 604



 Score = 75.5 bits (184), Expect(3) = 1e-40
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
 Frame = +3

Query: 366 LVGWD-----KKLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFLD 530
           LV W+     KK GGLGIR    AN  +LGKLVWD    S+KLWVQV+K KY++N + ++
Sbjct: 610 LVMWEVAITPKKAGGLGIRDTSCANMALLGKLVWDCLNNSEKLWVQVLKHKYLRNQSGMN 669

Query: 531 -LSKKPGSVTWNSIMKAKIVLRDGFEFKLG 617
             S+   S TW +I+ A   L++G  + +G
Sbjct: 670 GNSRNSSSATWKNIVSAYEHLKEGLHWNIG 699



 Score = 48.1 bits (113), Expect(3) = 1e-40
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 20/130 (15%)
 Frame = +2

Query: 611  IRDGMSSFWFSNWSEVGTLSN--------------------GQWNFNLLYTSIPSAICER 730
            I D   S W+  W+  G L N                      W  + L T IP  I + 
Sbjct: 698  IGDVHKSVWYDEWTPFGKLCNLVPYVHISESDFMVADLWKGVSWEVDSLTTPIPHEIKQF 757

Query: 731  IKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKVPGPE 910
            I       ++E+  ++         Y+A+  Y WL +   A++   + +WNWLW    PE
Sbjct: 758  ICGLRYPSSTELEPQWEWWPAASKKYSAREGYRWLLKK--ALNWNANSNWNWLWNTNIPE 815

Query: 911  KIKFLIWTAM 940
            K KF +W  +
Sbjct: 816  KFKFTMWLGL 825


>dbj|GAU21723.1| hypothetical protein TSUD_328480 [Trifolium subterraneum]
          Length = 806

 Score =  115 bits (287), Expect(2) = 2e-40
 Identities = 56/93 (60%), Positives = 71/93 (76%), Gaps = 6/93 (6%)
 Frame = +3

Query: 363 HLVGWDK-----KLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFL 527
           HLVGWDK     KLGG+GIRKAR+ANT +LGKLVW++H+ SD LWV+VI+ KY+K    L
Sbjct: 523 HLVGWDKITKSKKLGGVGIRKARDANTSLLGKLVWNIHQNSDALWVKVIQHKYLKEENLL 582

Query: 528 DL-SKKPGSVTWNSIMKAKIVLRDGFEFKLGMG 623
           +L + K GSVTWN+I KA   L++GF F+LG G
Sbjct: 583 NLTNNKTGSVTWNAIRKALSALKEGFHFRLGNG 615



 Score = 80.5 bits (197), Expect(2) = 2e-40
 Identities = 47/134 (35%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
 Frame = +2

Query: 599 F*VQIRDGMSSFWFSNWSEVGTLSN--------------------GQWNFNLLYTSIPSA 718
           F  ++ +G SSFW+SNWS  G ++N                    G W FNLLYT++P  
Sbjct: 608 FHFRLGNGNSSFWYSNWSGNGVIANQVMFVDIHDLEMRVRDVYTDGNWQFNLLYTNLPQE 667

Query: 719 ICERIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKV 898
           I E++  T I LN  V D                 Y+W              SW+WLW V
Sbjct: 668 IKEKLNSTAINLNPFVND----------------CYTW------------KASWSWLWHV 699

Query: 899 PGPEKIKFLIWTAM 940
           P PEKIKF IWT +
Sbjct: 700 PAPEKIKFFIWTML 713



 Score =  146 bits (368), Expect = 2e-35
 Identities = 71/130 (54%), Positives = 93/130 (71%)
 Frame = +1

Query: 1   LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
           LK+N+               +  IV++ GI RTLSLEKYLGFPM+HGRL R+ +EF EEK
Sbjct: 399 LKVNINKSKVFFSSTTRSGKISSIVASIGINRTLSLEKYLGFPMMHGRLRRRYFEFFEEK 458

Query: 181 VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
           +++RL   W++ LLNKAGR+TL+KSVLN IP YYMQI  LPQ+TC+ ID+T+RNFIWKG+
Sbjct: 459 ISKRL-AIWQHNLLNKAGRMTLIKSVLNFIPNYYMQIAWLPQTTCDVIDRTTRNFIWKGS 517

Query: 361 STSWVGIRNW 390
           S   + +  W
Sbjct: 518 SDIGIHLVGW 527


>gb|PNY04054.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1274

 Score = 95.5 bits (236), Expect(3) = 2e-40
 Identities = 44/90 (48%), Positives = 62/90 (68%)
 Frame = +1

Query: 106  LEKYLGFPMIHGRLERKDYEFLEEKVTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYM 285
            L KYLGFPM+ GR+   D+ F+ +++  RL G WK+KLL++AGRVTL +SV++++P Y M
Sbjct: 997  LGKYLGFPMLSGRMRNSDFSFIMDRINNRLNG-WKSKLLSRAGRVTLAQSVISAMPIYTM 1055

Query: 286  QIGCLPQSTCNFIDKTSRNFIWKGNSTSWV 375
            Q   +PQ  C+ ID + R FIW  N   WV
Sbjct: 1056 QNLWIPQGVCDKIDASVRQFIWGNNHCHWV 1085



 Score = 81.3 bits (199), Expect(3) = 2e-40
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
 Frame = +3

Query: 363  HLVGWD-----KKLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFL 527
            H V WD     +  GGLGI  AR++N  +LGK +WDL    DKLWVQ++  KY+++   L
Sbjct: 1083 HWVKWDTVTQPRSKGGLGIHVARKSNIALLGKHIWDLIHHPDKLWVQLLADKYLRHDHIL 1142

Query: 528  DLSKKPG-SVTWNSIMKAKIVLRDGFEFKLGMG 623
              +K  G S  WN I+KA  VL+ GF+F++G G
Sbjct: 1143 HATKSQGASCVWNYIVKAVEVLKPGFKFRIGKG 1175



 Score = 39.3 bits (90), Expect(3) = 2e-40
 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 20/101 (19%)
 Frame = +2

Query: 599  F*VQIRDGMSSFWFSNWSEVGTLSN--------------------GQWNFNLLYTSIPSA 718
            F  +I  G  S W+ NW + G L N                    G W  + L T IP  
Sbjct: 1168 FKFRIGKGDVSLWYDNWLDYGCLCNSVPYVHISESHLLLKDVYNQGNWLLHSLTTQIPDN 1227

Query: 719  ICERIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTR 841
            +  ++ +  I +N++  D      +  G+Y+AK+ Y WL++
Sbjct: 1228 L--KLHIQSIFINNDSPDILIWGFSNFGVYSAKSGYHWLSQ 1266


>dbj|GAU12283.1| hypothetical protein TSUD_141910 [Trifolium subterraneum]
          Length = 1049

 Score =  159 bits (403), Expect = 7e-40
 Identities = 77/130 (59%), Positives = 100/130 (76%)
 Frame = +1

Query: 1   LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
           L++NV+              +  IV++TGI RTLSLEKYLGFPM+HGRL+R+D+EFLEEK
Sbjct: 568 LQVNVSKSKVFFSSNIRRGKISSIVTSTGINRTLSLEKYLGFPMMHGRLQRRDFEFLEEK 627

Query: 181 VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
           +++ L  SWK+ LLNKAGR+TLVKSVLNSIP YYMQI  LPQSTC+FID+ +RNF+WKG+
Sbjct: 628 ISKSL-ASWKHNLLNKAGRMTLVKSVLNSIPNYYMQIAWLPQSTCDFIDRMARNFLWKGS 686

Query: 361 STSWVGIRNW 390
           S + + +  W
Sbjct: 687 SDTGMHLVGW 696


>gb|PNY07262.1| ribonuclease H [Trifolium pratense]
          Length = 502

 Score =  155 bits (392), Expect = 1e-39
 Identities = 75/130 (57%), Positives = 99/130 (76%)
 Frame = +1

Query: 1   LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
           L++NV+              +  IV++TGI RTLSLEKYLGFPM+HGRL+R+D+EFLEEK
Sbjct: 171 LQVNVSKSKVFFSSNIRRGKISSIVTSTGINRTLSLEKYLGFPMMHGRLQRRDFEFLEEK 230

Query: 181 VTQRLLGSWKNKLLNKAGRVTLVKSVLNSIPTYYMQIGCLPQSTCNFIDKTSRNFIWKGN 360
           +++ L  SW++ LLNKAGR+T VKSVLNSIP YYMQI  LPQSTC+FID+ +RNF+WKG+
Sbjct: 231 ISKSL-ASWQHNLLNKAGRMTSVKSVLNSIPKYYMQIAWLPQSTCDFIDRMARNFLWKGS 289

Query: 361 STSWVGIRNW 390
           S + + +  W
Sbjct: 290 SDTGMHLVGW 299


>gb|KYP38975.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 534

 Score = 84.7 bits (208), Expect(3) = 2e-39
 Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
 Frame = +1

Query: 85  GIRRTLSLEKYLGFPMIHGRLERKDYEFLEEKVTQRLLGSWKNKLLNKAGRVTLVKSVLN 264
           GI  T  + KYLG PM HG+    D+  + +K+  RL  +WK+KLLNKAG++ LV+S ++
Sbjct: 93  GIGHTAQIGKYLGVPMTHGQPRCADFYDVMDKIQGRL-AAWKSKLLNKAGKLCLVESSIS 151

Query: 265 SIPTYYMQIGCLPQSTCNFIDKTSRNFIW-KGNSTSWVGIRNWAVL 399
           SIP Y MQ   LPQ+ CN ID+  R  +W K + + +    +WA +
Sbjct: 152 SIPGYSMQTLWLPQAVCNRIDQACRRMLWAKSDRSRYWSPVSWATV 197



 Score = 73.2 bits (178), Expect(3) = 2e-39
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +3

Query: 381 KKLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVK-NATFLDLSKKPGSVT 557
           K+ GGLG+R+AR  N  +LGKLVWDL     K WVQ++   Y+  N+     +++  S  
Sbjct: 201 KEHGGLGVREARRVNIALLGKLVWDLLTAPQKPWVQILSSLYLHGNSILCSQNRRGASPI 260

Query: 558 WNSIMKAKIVLRDGFEFKLGMG 623
           W+S++KA   LR+GFE +LG G
Sbjct: 261 WSSLVKALPYLREGFEPRLGSG 282



 Score = 55.1 bits (131), Expect(3) = 2e-39
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
 Frame = +2

Query: 608 QIRDGMSSFWFSNWSEV--------------------GTLSNGQWNFNLLYTSIPSAICE 727
           ++  G SS W+++WS                         ++G WNF  L+T +P+ +  
Sbjct: 278 RLGSGASSLWYTDWSGTRLWCGRVPFVHVADINKTVADCWASGVWNFTNLHTVLPAELSS 337

Query: 728 RIKLTPICLNSEVADRFT*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKVPGP 907
            +    +  +S   D F  + +  G YT  + Y ++T     +S+   + W  +WK+  P
Sbjct: 338 SVHRLSVVNSSLGLDHFVWRVDNSGCYTTASRYRFMT---TVLSTEGDVVWKKVWKLLIP 394

Query: 908 EKIKFLIWTAM 940
           EK+KF +W  +
Sbjct: 395 EKVKFFLWQCL 405


>dbj|GAU26057.1| hypothetical protein TSUD_225190 [Trifolium subterraneum]
          Length = 536

 Score =  124 bits (311), Expect(2) = 3e-39
 Identities = 57/81 (70%), Positives = 69/81 (85%)
 Frame = +3

Query: 381 KKLGGLGIRKAREANTPMLGKLVWDLHKGSDKLWVQVIKQKYVKNATFLDLSKKPGSVTW 560
           KKLGGLGIRKAREANT +LGKLVW++H+ SD LWVQVIKQKY+K    L+++KKPGSVTW
Sbjct: 152 KKLGGLGIRKAREANTSLLGKLVWNVHQNSDALWVQVIKQKYLKEEPLLNINKKPGSVTW 211

Query: 561 NSIMKAKIVLRDGFEFKLGMG 623
           N+IMKA   L+DGF ++LG G
Sbjct: 212 NAIMKALSALKDGFHYRLGNG 232



 Score = 67.4 bits (163), Expect(2) = 3e-39
 Identities = 39/108 (36%), Positives = 56/108 (51%)
 Frame = +2

Query: 599 F*VQIRDGMSSFWFSNWSEVGTLSNGQWNFNLLYTSIPSAICERIKLTPICLNSEVADRF 778
           F  ++ +G SSFWF++WS    L+N      +L+  I              L   V D  
Sbjct: 225 FHYRLGNGNSSFWFTDWSVNDMLAN-----QVLFIDIHD------------LEMRVRDVH 267

Query: 779 T*KGNLDGIYTAKAAYSWLTRTELAVSSGVSLSWNWLWKVPGPEKIKF 922
              GNL+GIYTA+  Y WL R   +V++   +SW+WLW +P PEK+ F
Sbjct: 268 I-AGNLNGIYTARDGYYWLNRHSFSVNTLNVISWSWLWHLPAPEKLNF 314



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = +1

Query: 1   LKINVAXXXXXXXXXXXXXXMDLIVSNTGIRRTLSLEKYLGFPMIHGRLERKDYEFLEEK 180
           L++NV+              +  IV++TGI RTLSLEKYLGFPM+HGRL+R+D+EFLE++
Sbjct: 67  LQVNVSKSKVFFSSNIRRGKISSIVTSTGINRTLSLEKYLGFPMMHGRLQRRDFEFLEKR 126

Query: 181 VTQ 189
           + +
Sbjct: 127 LVR 129