BLASTX nr result

ID: Astragalus22_contig00016641 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00016641
         (333 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004511302.1| PREDICTED: pentatricopeptide repeat-containi...    69   2e-11
ref|XP_004511301.1| PREDICTED: pentatricopeptide repeat-containi...    69   2e-11
gb|KHN05607.1| Pentatricopeptide repeat-containing protein [Glyc...    55   3e-06
ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containi...    55   3e-06

>ref|XP_004511302.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           isoform X2 [Cicer arietinum]
          Length = 672

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 40/78 (51%), Positives = 45/78 (57%)
 Frame = -2

Query: 245 MEMVGKVAXXXXXXXXXPYASSKPSINTLVTDLNSHXXXXXXXXXXXXXSDPNSGKPWSN 66
           MEMVGKV          P ++S+PSI T+V D NS              SDPNSGKPW N
Sbjct: 1   MEMVGKVCLPLLLPYPPP-STSRPSIATVVNDFNSTSHSRTRLHIGKSSSDPNSGKPWCN 59

Query: 65  HHLSPSGNDILNTLIHSS 12
           HHLS SG  ILN L+HSS
Sbjct: 60  HHLSSSGQHILNALLHSS 77


>ref|XP_004511301.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           isoform X1 [Cicer arietinum]
          Length = 787

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 40/78 (51%), Positives = 45/78 (57%)
 Frame = -2

Query: 245 MEMVGKVAXXXXXXXXXPYASSKPSINTLVTDLNSHXXXXXXXXXXXXXSDPNSGKPWSN 66
           MEMVGKV          P ++S+PSI T+V D NS              SDPNSGKPW N
Sbjct: 1   MEMVGKVCLPLLLPYPPP-STSRPSIATVVNDFNSTSHSRTRLHIGKSSSDPNSGKPWCN 59

Query: 65  HHLSPSGNDILNTLIHSS 12
           HHLS SG  ILN L+HSS
Sbjct: 60  HHLSSSGQHILNALLHSS 77


>gb|KHN05607.1| Pentatricopeptide repeat-containing protein [Glycine soja]
          Length = 741

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 28/55 (50%), Positives = 33/55 (60%)
 Frame = -2

Query: 176 PSINTLVTDLNSHXXXXXXXXXXXXXSDPNSGKPWSNHHLSPSGNDILNTLIHSS 12
           P INTL+ DLNS+              DPN GKPWS H LSP+G  IL+TL HS+
Sbjct: 8   PPINTLIHDLNSNSSSRHRISLGKSL-DPNRGKPWSPHRLSPTGQQILHTLSHSN 61


>ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 28/55 (50%), Positives = 33/55 (60%)
 Frame = -2

Query: 176 PSINTLVTDLNSHXXXXXXXXXXXXXSDPNSGKPWSNHHLSPSGNDILNTLIHSS 12
           P INTL+ DLNS+              DPN GKPWS H LSP+G  IL+TL HS+
Sbjct: 41  PPINTLIHDLNSNSSSRHRISLGKSL-DPNRGKPWSPHRLSPTGQQILHTLSHSN 94


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