BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00015431
         (2380 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU27517.1| hypothetical protein TSUD_147110 [Trifolium subt...   400   0.0  
gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   380   0.0  
gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]   392   0.0  
gb|PNX92266.1| retrotransposon-related protein [Trifolium pratense]   386   0.0  
dbj|GAU12723.1| hypothetical protein TSUD_122150 [Trifolium subt...   376   0.0  
gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   374   0.0  
gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   385   0.0  
gb|PNY17729.1| retrotransposon-related protein [Trifolium pratense]   376   0.0  
gb|PNY17651.1| retrotransposon-related protein [Trifolium pratense]   362   0.0  
dbj|GAU25035.1| hypothetical protein TSUD_155090 [Trifolium subt...   378   0.0  
dbj|GAU25735.1| hypothetical protein TSUD_216660 [Trifolium subt...   385   0.0  
gb|PNY17582.1| Ty3/gypsy retrotransposon protein, partial [Trifo...   366   0.0  
gb|KYP34558.1| Retrotransposable element Tf2 [Cajanus cajan]          393   0.0  
dbj|GAU39660.1| hypothetical protein TSUD_60270 [Trifolium subte...   371   e-180
dbj|GAU24592.1| hypothetical protein TSUD_289530 [Trifolium subt...   323   e-178
ref|XP_022547700.1| uncharacterized protein LOC111200699 [Brassi...   327   e-172
ref|XP_013658015.1| uncharacterized protein LOC106362703 [Brassi...   330   e-170
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     322   e-169
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   312   e-163
ref|XP_010491426.2| PREDICTED: uncharacterized protein LOC104769...   298   e-162

>dbj|GAU27517.1| hypothetical protein TSUD_147110 [Trifolium subterraneum]
          Length = 1224

 Score =  400 bits (1027), Expect(3) = 0.0
 Identities = 196/298 (65%), Positives = 239/298 (80%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMS+YERELLAIVYA++KW+TYL++ HFIIK+DQKSIKF++E+R NTPFQQV M+KLM
Sbjct: 650  QQAMSVYERELLAIVYAIQKWSTYLAYRHFIIKTDQKSIKFMLEQRLNTPFQQVWMAKLM 709

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              DFEIHY +GV+N  ADALSR T AELL LLL+N+ EDLLE+IK SW +D VL   I E
Sbjct: 710  GYDFEIHYKEGVNNNVADALSRRTGAELLPLLLNNAQEDLLERIKESWSNDVVLHNSIQE 769

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L+ ++ S+PKF+W RGELR++GKLVI  G +  L   IL+WLH+S  GGHSGRD TA R+
Sbjct: 770  LQADAKSHPKFTWCRGELRRKGKLVI--GADPTLKQIILNWLHDSPSGGHSGRDVTAARV 827

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +S+F+WKG+ KD+Q YV+NC VC   K DL AS GL+QPLPIP  +W+AIS+DFI G P 
Sbjct: 828  KSLFFWKGVNKDIQHYVRNCDVCQRCKPDLSASPGLLQPLPIPKLVWDAISMDFIEGLPT 887

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            S  K VI VVVDRLS+YAHF+ L+HP TALDVA  F+DNVFKLHGMP T+ SDRDP F
Sbjct: 888  SSKKQVIFVVVDRLSKYAHFMALAHPYTALDVAQQFLDNVFKLHGMPSTITSDRDPIF 945



 Score =  379 bits (973), Expect(3) = 0.0
 Identities = 179/259 (69%), Positives = 216/259 (83%), Gaps = 1/259 (0%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLSKVW++LF LQ VAL+K T YHPQ+D + EVVNKCLETYLRCMC+  P+SWS+W+ 
Sbjct: 943  PIFLSKVWNELFQLQGVALNKSTAYHPQSDGQTEVVNKCLETYLRCMCADKPSSWSQWLS 1002

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT++H++I STP+EVVYGQPPPI+LPYLP E +   +DR+ +AR+AAI+LLKFH
Sbjct: 1003 LAEWWYNTNYHTSIHSTPFEVVYGQPPPIHLPYLPEEATAAVVDRSLSARDAAIQLLKFH 1062

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            LLRAQN+M QQ NKHRSD++F+IGD V+LKLQPYRQS+IR S F+KL PKFYGPFK+LD 
Sbjct: 1063 LLRAQNKMTQQVNKHRSDKTFSIGDMVYLKLQPYRQSTIRKSQFHKLVPKFYGPFKILDS 1122

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLP-ATLDSIPIKEPEAILERKM 2087
            IG  AYQLELPPN+ IHNVFHVSQLK   +P   +  PLP   L++  IKEPEAILERKM
Sbjct: 1123 IGQVAYQLELPPNAAIHNVFHVSQLKLCFNPQIATTYPLPNDPLNTSSIKEPEAILERKM 1182

Query: 2088 VKRGHVAATKVLVKWKDLP 2144
            VKRG+ AATKVLV+WK  P
Sbjct: 1183 VKRGNSAATKVLVQWKGEP 1201



 Score = 35.8 bits (81), Expect(3) = 0.0
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +1

Query: 2152 ATWEFCYDMLQKFPNFH 2202
            A WEF YD+L+KFPNFH
Sbjct: 1205 AIWEFYYDLLKKFPNFH 1221


>gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1476

 Score =  380 bits (976), Expect(3) = 0.0
 Identities = 188/298 (63%), Positives = 230/298 (77%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMSIYERELLAIVYA+++W TYL+H  F+IK+DQKSIK ++E+R NTPFQQV M+KLM
Sbjct: 904  QQAMSIYERELLAIVYAVQRWGTYLAHKPFVIKTDQKSIKHMLEQRLNTPFQQVWMAKLM 963

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              DFEI Y +G  N AADALSR   AELL L L N  E+L E IK SW  D  LQ +I++
Sbjct: 964  GFDFEIQYKEGTSNVAADALSRKVGAELLPLFLGNVNENLFEMIKDSWSADPNLQVIISD 1023

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L+ N+  + KFSW+RGELR++GKLV+G+  +  L+  IL W H+S  GGHSGRD TA RI
Sbjct: 1024 LQTNTKPHSKFSWYRGELRRKGKLVVGS--DPTLHRFILKWFHDSPAGGHSGRDVTAARI 1081

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +S+F+WKG+ KD+QQY++NC VC   K +   S GL+QPLPIP +IW+AISLDFI G P 
Sbjct: 1082 KSLFFWKGMTKDIQQYIRNCDVCQRCKPEQIPSPGLLQPLPIPDKIWDAISLDFIEGLPS 1141

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            S GK VI VVVDRLS+YAHF+ LSHP TALDVA LF+DNVFKLHG+P T+ SDRDP F
Sbjct: 1142 SMGKQVIFVVVDRLSKYAHFMALSHPFTALDVAQLFLDNVFKLHGLPSTITSDRDPIF 1199



 Score =  372 bits (954), Expect(3) = 0.0
 Identities = 172/260 (66%), Positives = 214/260 (82%), Gaps = 1/260 (0%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLSK+W+DLF LQ V L+K T YHPQTD + E+VNKCLETYLRCMC+  P+SW KW+ 
Sbjct: 1197 PIFLSKLWNDLFQLQGVYLNKSTAYHPQTDGQTEIVNKCLETYLRCMCADKPSSWIKWLS 1256

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT+FHS+IQ+TP+EVVYGQ PP++LPYLPGE S++ +DRT +ARE AI++LKFH
Sbjct: 1257 LAEWWYNTNFHSSIQTTPFEVVYGQTPPLHLPYLPGESSSLQVDRTLHARETAIQMLKFH 1316

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            L+RAQNRMAQ A+KHR+DR F IGDFV+LKLQPYRQSS+R    +KL PKFYGP+KV+D+
Sbjct: 1317 LMRAQNRMAQHADKHRTDRIFHIGDFVYLKLQPYRQSSVRLQRHHKLMPKFYGPYKVVDR 1376

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDS-IPIKEPEAILERKM 2087
            IG  AYQLELP  ++IHNVFHVSQLK   +    ++ P+P  + S     EPE+IL+RKM
Sbjct: 1377 IGAAAYQLELPSTAKIHNVFHVSQLKRCKNANETAVHPMPGIISSEFTQLEPESILDRKM 1436

Query: 2088 VKRGHVAATKVLVKWKDLPE 2147
            VKRG +AATKVLVKWK+LP+
Sbjct: 1437 VKRGRIAATKVLVKWKELPQ 1456



 Score = 40.8 bits (94), Expect(3) = 0.0
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +1

Query: 2152 ATWEFCYDMLQKFPNFHP 2205
            ATWEF YD+L+KFPNFHP
Sbjct: 1459 ATWEFYYDLLKKFPNFHP 1476


>gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1472

 Score =  392 bits (1007), Expect(3) = 0.0
 Identities = 193/298 (64%), Positives = 235/298 (78%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMS+YERELLAIVYA++KW +YLSH  F+I++DQKSIK +++++ NTPFQQV ++KL+
Sbjct: 902  QQAMSVYERELLAIVYAVQKWGSYLSHAPFVIRTDQKSIKHMLDQKLNTPFQQVWVAKLL 961

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              DFEIHY +G  N AADALSR T AELL L L N+  DLL  I ASWQ D   + +I +
Sbjct: 962  GFDFEIHYKEGSSNLAADALSRKTGAELLPLFLDNAAPDLLTSITASWQQDPHFKAIILD 1021

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L+ N  S+PKFSW RGELR+RGKLVIG+  + A+  +ILHWLH+SA+GGHSGRD TATRI
Sbjct: 1022 LQSNPQSHPKFSWTRGELRRRGKLVIGS--DPAVKESILHWLHDSALGGHSGRDVTATRI 1079

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +S+FYWKG+ KD+  YV+NC VC  +K DL A  GL+QPLPIP +IW AIS+DFI G P 
Sbjct: 1080 KSLFYWKGMTKDILHYVKNCGVCQRNKPDLAAYPGLLQPLPIPTQIWTAISMDFIEGLPT 1139

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            S GK VI VVVDRLS+YAHF+ LSHP TALDVA LF+DNVFKLHGMP T+ SDRD  F
Sbjct: 1140 SAGKQVIFVVVDRLSKYAHFMALSHPYTALDVAQLFLDNVFKLHGMPETITSDRDXIF 1197



 Score =  365 bits (937), Expect(3) = 0.0
 Identities = 172/256 (67%), Positives = 208/256 (81%)
 Frame = +3

Query: 1377 FLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIPIA 1556
            FLS  W + F LQ VALHK T YHPQ+D + E+VNKCLETYLRCMCS  PT+W KW+ +A
Sbjct: 1197 FLSTFWHEFFKLQGVALHKSTAYHPQSDGQTEIVNKCLETYLRCMCSSRPTNWFKWLSLA 1256

Query: 1557 EWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFHLL 1736
            EWWYNT++HS+I +TP+EVVYGQPPPI+LPYLPG   + ++DR+  AR+ AIKLLKFHLL
Sbjct: 1257 EWWYNTNYHSSIHTTPFEVVYGQPPPIHLPYLPGSSPSFSVDRSLIARDEAIKLLKFHLL 1316

Query: 1737 RAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDKIG 1916
            RAQNRM+QQANKHRSDR F+IGD+V+LKLQPYRQ S++   + KL PKFYGPFKVLD+IG
Sbjct: 1317 RAQNRMSQQANKHRSDRVFSIGDYVYLKLQPYRQLSMKKHGYNKLLPKFYGPFKVLDRIG 1376

Query: 1917 NTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMVKR 2096
              AYQLELPP++ IHNVFHVSQLK   +P    IQ LP+    +P K P AIL+RKMVKR
Sbjct: 1377 GAAYQLELPPSAAIHNVFHVSQLKLCPNPQAQPIQHLPSATAGVP-KVPVAILDRKMVKR 1435

Query: 2097 GHVAATKVLVKWKDLP 2144
            G++AATKVLV+W+D P
Sbjct: 1436 GNIAATKVLVQWQDSP 1451



 Score = 34.7 bits (78), Expect(3) = 0.0
 Identities = 12/20 (60%), Positives = 18/20 (90%)
 Frame = +1

Query: 2146 SLATWEFCYDMLQKFPNFHP 2205
            +LATWEF  ++L+K+P+FHP
Sbjct: 1453 NLATWEFYSELLKKYPDFHP 1472


>gb|PNX92266.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1479

 Score =  386 bits (991), Expect(3) = 0.0
 Identities = 190/298 (63%), Positives = 236/298 (79%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMS+YERELLAIVYA++KW  YLSH  FIIK+DQ+SIK +++++ NT FQQ  ++KLM
Sbjct: 909  QQAMSVYERELLAIVYAVQKWGAYLSHAPFIIKTDQRSIKHILDQKLNTSFQQAWVAKLM 968

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              DFEI Y +G HN AADALSR   AELL +LL+++  DL E IKASW  D  +Q+LIA+
Sbjct: 969  GFDFEIQYKEGAHNLAADALSRREGAELLPMLLNSASPDLYESIKASWTRDPSVQKLIAD 1028

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L  N  S+PKFSW R ELR+RGKLVIG   +  L  +IL WLH+S+VGGHSGRD TA R+
Sbjct: 1029 LVLNHNSHPKFSWVRNELRRRGKLVIGQDPH--LKNSILRWLHDSSVGGHSGRDITAARV 1086

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +S+FYWKG+ KD+Q YV+NCAVC  +KADL AS GL+QPLPIP++IW  IS+DFI G PP
Sbjct: 1087 KSLFYWKGMAKDIQIYVRNCAVCQRNKADLSASPGLLQPLPIPSKIWVDISMDFIEGLPP 1146

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            S GK VI VVVDRLS+YAHF+ LSHP TA+D+A +F+DNVFKLHG+P ++ SDRDP F
Sbjct: 1147 SAGKQVIFVVVDRLSKYAHFIPLSHPYTAVDIAKVFLDNVFKLHGLPESITSDRDPIF 1204



 Score =  361 bits (927), Expect(3) = 0.0
 Identities = 172/256 (67%), Positives = 209/256 (81%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS  W++ F LQ VAL+K T YHPQ+D + E+VNK +ETYLRCMCS+ PTSWS+WIP
Sbjct: 1202 PIFLSTFWNEFFKLQGVALNKSTAYHPQSDGQTEIVNKAVETYLRCMCSEKPTSWSQWIP 1261

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AE+WYN++FHSAIQ+TPYEVVYGQPPPI+LPYLPG  S++T+D +  ARE AIKLLKFH
Sbjct: 1262 MAEYWYNSNFHSAIQTTPYEVVYGQPPPIHLPYLPGASSSVTVDGSLLAREEAIKLLKFH 1321

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            LLRAQNRM QQA+KHRSDR F IGDFV+LKL PYRQ S++    +KL PKF+GPFKV+DK
Sbjct: 1322 LLRAQNRMIQQADKHRSDRKFEIGDFVYLKLHPYRQLSVKPHLHHKLLPKFFGPFKVIDK 1381

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMV 2090
            +G+ AYQLELP +  IHNVFHVSQLK   +P +  I P+PA +D    + PEAIL+RKMV
Sbjct: 1382 VGHVAYQLELPSSVAIHNVFHVSQLKLCPNPASNPIVPIPAGVDQFH-RVPEAILDRKMV 1440

Query: 2091 KRGHVAATKVLVKWKD 2138
            KRG  AATKVLVKW++
Sbjct: 1441 KRGRTAATKVLVKWQN 1456



 Score = 43.1 bits (100), Expect(3) = 0.0
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +1

Query: 2140 SLSLATWEFCYDMLQKFPNFHP 2205
            S  LATWEF YD+L+KFPNFHP
Sbjct: 1458 SPELATWEFYYDLLEKFPNFHP 1479


>dbj|GAU12723.1| hypothetical protein TSUD_122150 [Trifolium subterraneum]
          Length = 1492

 Score =  376 bits (966), Expect(3) = 0.0
 Identities = 174/258 (67%), Positives = 212/258 (82%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS+ W++ F+LQ VAL+K T YHPQTD + +++NK LETYLRCMC++ P +WSKW+ 
Sbjct: 1214 PIFLSQFWTEFFTLQGVALNKSTAYHPQTDGQTKIINKSLETYLRCMCAEKPQAWSKWLS 1273

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNTSFHSAIQSTP+EVVYGQPPP+ LPYLPGE +N+T+DR+  ARE AIKLLKFH
Sbjct: 1274 LAEWWYNTSFHSAIQSTPFEVVYGQPPPMNLPYLPGESTNLTVDRSLTAREEAIKLLKFH 1333

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            LLRAQNRM QQA+KHRSDR F++GD+VFLKL PY+Q S+R + F+KL PK+YGPFK+LDK
Sbjct: 1334 LLRAQNRMKQQADKHRSDRKFSVGDYVFLKLHPYKQHSMRKTKFHKLLPKYYGPFKILDK 1393

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMV 2090
            IG  AYQLELP + EIHNVFHVSQLK   +P    +  +P  +   P + PE+IL+RKMV
Sbjct: 1394 IGAAAYQLELPRDVEIHNVFHVSQLKLCHNPDTAEVYNIPGFMTKPPTRIPESILDRKMV 1453

Query: 2091 KRGHVAATKVLVKWKDLP 2144
            KRG VAATKVLVKWKD P
Sbjct: 1454 KRGRVAATKVLVKWKDTP 1471



 Score =  373 bits (957), Expect(3) = 0.0
 Identities = 183/311 (58%), Positives = 235/311 (75%), Gaps = 9/311 (2%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYA---------MKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPF 639
            QQA+S+YERELLAI+YA         ++KW  YLSH  F IK+DQKSIK+++E++ NTPF
Sbjct: 912  QQALSVYERELLAIIYARELLAIIYAVQKWGAYLSHAPFTIKTDQKSIKYILEQKLNTPF 971

Query: 640  QQVLMSKLMDLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDD 819
            QQ  +SKLM  +F+I Y +GV N AADALSR   AELL  LL +++  L++QIKASW  D
Sbjct: 972  QQAWVSKLMGFEFDIQYKEGVLNTAADALSRKEGAELLVSLLDSNIPSLMDQIKASWDSD 1031

Query: 820  AVLQQLIAELEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHS 999
            A L ++I EL  + +++ KFSW + ELR++GKLV+GN  N  L   I+HW+HNSA GGHS
Sbjct: 1032 ATLTKIIDELTVDPSTHSKFSWAKEELRRKGKLVVGN--NIELKQQIMHWMHNSAAGGHS 1089

Query: 1000 GRDATATRIRSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAIS 1179
            GRD TA RI+S+F+WKGL KDVQQY++NC +C   K DL AS GL+QPLPIP+ +W  IS
Sbjct: 1090 GRDNTAARIKSLFFWKGLFKDVQQYIRNCKICQTCKPDLAASPGLLQPLPIPSLVWYDIS 1149

Query: 1180 LDFI*GSPPSDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVV 1359
            +DFI G P S GKHVI VVVDRLS+YAHF+ L+HP +ALDVA +F+DN+FKLHGMP ++ 
Sbjct: 1150 MDFIDGLPASSGKHVIFVVVDRLSKYAHFIPLAHPYSALDVAQVFLDNIFKLHGMPNSIT 1209

Query: 1360 SDRDPTF*VKF 1392
            SDRDP F  +F
Sbjct: 1210 SDRDPIFLSQF 1220



 Score = 38.5 bits (88), Expect(3) = 0.0
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +1

Query: 2149 LATWEFCYDMLQKFPNFHP 2205
            +ATWE+ YD+LQ+FP FHP
Sbjct: 1474 MATWEYYYDLLQRFPTFHP 1492


>gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1005

 Score =  374 bits (960), Expect(3) = 0.0
 Identities = 183/298 (61%), Positives = 233/298 (78%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMS+YERELLAIVYA++KW +YLSH  FIIK+DQKSIK +++++ NTPFQQV ++KL+
Sbjct: 435  QQAMSVYERELLAIVYAVQKWGSYLSHAPFIIKTDQKSIKHMLDQKLNTPFQQVWVAKLL 494

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              DFEI Y +G  N AADALSR   AELL L+LSN+ +DL E I  +WQ D  L+ +I +
Sbjct: 495  GFDFEIQYKEGSSNLAADALSRKVGAELLPLILSNASDDLWESINLAWQQDTHLKAIIHD 554

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L+K+  S+ KFSW R ELR+RGKLVIG+  N  +   IL WLH+SA+GGHSGRD T +R+
Sbjct: 555  LKKDPKSHSKFSWIRDELRRRGKLVIGS--NPTIKETILTWLHSSAIGGHSGRDVTTSRV 612

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +S+FYWKG+ KD+  +V+NCA+C  +K DL AS GL+QPLPIP +IW  IS+DF+ G P 
Sbjct: 613  KSLFYWKGMNKDIITFVKNCAICQKNKPDLAASPGLLQPLPIPNQIWTHISMDFVEGLPT 672

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            S GK VI VVVDRLS+YAHF+ LSHP TA DVA LF+DNVFKLHG+P +++SDRDP F
Sbjct: 673  SVGKQVIFVVVDRLSKYAHFMALSHPYTASDVAQLFLDNVFKLHGLPESIISDRDPIF 730



 Score =  369 bits (947), Expect(3) = 0.0
 Identities = 176/258 (68%), Positives = 212/258 (82%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P F+S  W+D F LQ VAL+K + YHPQ+D + EVVNKCLETYLRCMCS  PT W KW+ 
Sbjct: 728  PIFISSFWNDFFKLQGVALNKSSAYHPQSDGQTEVVNKCLETYLRCMCSDRPTQWFKWLS 787

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYN+++HS+I +TP+EVVYGQPPPI+LPYLPG  +  ++DR+  ARE AIKLLKFH
Sbjct: 788  LAEWWYNSNYHSSIHTTPFEVVYGQPPPIHLPYLPGSSATASVDRSLIAREEAIKLLKFH 847

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            LLRAQNRM QQANKHRSDR FAIGD+V+LKLQPYRQ S+++  F+KL PKFYGPF VLD+
Sbjct: 848  LLRAQNRMTQQANKHRSDRVFAIGDYVYLKLQPYRQLSMKSHGFHKLLPKFYGPFPVLDR 907

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMV 2090
            IG+TAYQLELPP++ IHNVFHVSQLK   +P    IQ +PA+L S   + P AIL+RKMV
Sbjct: 908  IGSTAYQLELPPSAAIHNVFHVSQLKLCPNPQGMPIQHIPASL-SHETRIPIAILDRKMV 966

Query: 2091 KRGHVAATKVLVKWKDLP 2144
            KRG+ AATKVLV+WKDLP
Sbjct: 967  KRGNRAATKVLVQWKDLP 984



 Score = 41.2 bits (95), Expect(3) = 0.0
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +1

Query: 2137 ISLSLATWEFCYDMLQKFPNFHP 2205
            + +  ATWEF YD+L+KFPNFHP
Sbjct: 983  LPMDKATWEFYYDLLKKFPNFHP 1005


>gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1478

 Score =  385 bits (989), Expect(3) = 0.0
 Identities = 189/298 (63%), Positives = 234/298 (78%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMSIYERE+LAIVYA++KW +YLSH  F+IK+DQKSIK +++++ NTPFQQV ++KLM
Sbjct: 908  QQAMSIYEREMLAIVYAVQKWGSYLSHAPFVIKTDQKSIKHMLDQKLNTPFQQVWVAKLM 967

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              DFEI Y +G  N AADALSR T AELL LLL+N+  DLL+ I+ SWQ D++L  +I +
Sbjct: 968  GFDFEIQYREGSSNLAADALSRKTGAELLILLLNNASTDLLQAIQLSWQSDSILNSIIQD 1027

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L+K+   +PKFSW R ELR+RGKLVIG   N  + ++IL WLH+SA+GGHSGRD T +RI
Sbjct: 1028 LQKDPKIHPKFSWVRNELRRRGKLVIGA--NHDIKLSILSWLHDSAIGGHSGRDVTLSRI 1085

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            RS+FYWKG+ KDV  YV+NC +C  SK DL AS GL+QPLPIP  IW  IS+DFI G P 
Sbjct: 1086 RSLFYWKGMAKDVLNYVRNCGICQKSKPDLAASPGLLQPLPIPTLIWTDISMDFIEGLPK 1145

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            S GK VI VVVDRLS+YAHF+ L+HP TA DVA LF+DNVFKLHG+P ++ SDRDP F
Sbjct: 1146 SGGKQVIFVVVDRLSKYAHFMALAHPYTASDVAQLFLDNVFKLHGLPESITSDRDPIF 1203



 Score =  362 bits (930), Expect(3) = 0.0
 Identities = 169/258 (65%), Positives = 212/258 (82%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P F+S  W++ F LQ VAL+K + YHPQ+D + E+VNKCLETYLRCMCS  PT W KW+ 
Sbjct: 1201 PIFISTFWNEFFKLQGVALNKSSAYHPQSDGQTEIVNKCLETYLRCMCSDKPTQWFKWLS 1260

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT++HS+I++TP+EVVYGQPPPI+LPYLPG  +++++DR+  ARE  IKLL+FH
Sbjct: 1261 LAEWWYNTNYHSSIRTTPFEVVYGQPPPIHLPYLPGAATSVSVDRSLIAREEVIKLLQFH 1320

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            LLRAQNRM+QQA+KHRSDR F+IGDFV+LKLQPYRQ S+++   +KL PKFYGPFKVLD+
Sbjct: 1321 LLRAQNRMSQQADKHRSDRVFSIGDFVYLKLQPYRQLSLKSHGVHKLLPKFYGPFKVLDR 1380

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMV 2090
            IG  AY L+LPP++  HNVFHVSQLK   +P +  IQ LPA + ++  K P AIL+RKMV
Sbjct: 1381 IGLAAYALDLPPSTVFHNVFHVSQLKLCPNPHHHPIQHLPAEISAVS-KVPTAILDRKMV 1439

Query: 2091 KRGHVAATKVLVKWKDLP 2144
            KRGHVAATKVLV+WKD P
Sbjct: 1440 KRGHVAATKVLVQWKDSP 1457



 Score = 35.8 bits (81), Expect(3) = 0.0
 Identities = 12/18 (66%), Positives = 16/18 (88%)
 Frame = +1

Query: 2152 ATWEFCYDMLQKFPNFHP 2205
            ATWEF +D+++KFP FHP
Sbjct: 1461 ATWEFYHDLIKKFPEFHP 1478


>gb|PNY17729.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1479

 Score =  376 bits (965), Expect(3) = 0.0
 Identities = 183/298 (61%), Positives = 233/298 (78%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMS+YERELLAIVYA++KW +YLSH  F IK+DQKSIK +++++ NTPFQQV ++KL+
Sbjct: 908  QQAMSVYERELLAIVYAVQKWGSYLSHAPFTIKTDQKSIKHMLDQKLNTPFQQVWVAKLL 967

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              DF+I Y +G  N AADALSR   AELL L++SN+  DL E I  +WQ D  L+ +I E
Sbjct: 968  GFDFDIQYKEGSSNVAADALSRKMGAELLALMMSNASHDLWESINLAWQQDPYLKDIIHE 1027

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            +++NS S+ KFSW R ELR+RGKLVIG+  + A+   IL WLH+SAVGGHSGRD TA+++
Sbjct: 1028 VQQNSKSHSKFSWIRDELRRRGKLVIGS--DPAIKETILTWLHSSAVGGHSGRDVTASKV 1085

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +S+FYWKG+ KD+  +V+NCA+C   K DL AS GL+QPLPIP+ IW  IS+DFI G P 
Sbjct: 1086 KSLFYWKGMNKDILNFVKNCAICQKQKPDLAASPGLLQPLPIPSHIWAHISMDFIDGLPT 1145

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            S GK VI VVVDRLS+YAHF+ L+HP TALDVA LF+DNVFKLHG+P ++ SDRDP F
Sbjct: 1146 SSGKQVIFVVVDRLSKYAHFMALAHPYTALDVAQLFLDNVFKLHGLPESITSDRDPIF 1203



 Score =  367 bits (941), Expect(3) = 0.0
 Identities = 170/258 (65%), Positives = 209/258 (81%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS  W++ F LQ VAL+K + YHPQ+D + E+VNKCLETYLRCMCS +PT W KW+ 
Sbjct: 1201 PIFLSNFWNEFFKLQGVALNKSSAYHPQSDGQTEIVNKCLETYLRCMCSDHPTQWFKWLS 1260

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT+FHS+I +TP+EVVYGQPPPI+LPYLPG  + +++DR+  ARE AIKLLKFH
Sbjct: 1261 LAEWWYNTNFHSSIHTTPFEVVYGQPPPIHLPYLPGSSATLSVDRSLIAREEAIKLLKFH 1320

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            LLRAQNRM QQANKHRSDR F IGD+V+LKLQPYRQ S+++  F+KL PKFYGPF ++D+
Sbjct: 1321 LLRAQNRMVQQANKHRSDRVFNIGDYVYLKLQPYRQLSMKSHGFHKLLPKFYGPFPIVDR 1380

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMV 2090
            IG  AYQL+LPP++ IHNVFHVSQLK   +P    +Q LPA   +   K P AIL+RKMV
Sbjct: 1381 IGAAAYQLQLPPSAAIHNVFHVSQLKLCPNPQGLPVQHLPAATVAHVDKIPVAILDRKMV 1440

Query: 2091 KRGHVAATKVLVKWKDLP 2144
            KRGH AATKVL++WK+LP
Sbjct: 1441 KRGHKAATKVLIQWKNLP 1458



 Score = 38.9 bits (89), Expect(3) = 0.0
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +1

Query: 2137 ISLSLATWEFCYDMLQKFPNFHP 2205
            + L  ATWEF YD L+KFP FHP
Sbjct: 1457 LPLDKATWEFYYDFLKKFPTFHP 1479


>gb|PNY17651.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1478

 Score =  362 bits (929), Expect(3) = 0.0
 Identities = 175/302 (57%), Positives = 229/302 (75%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMS+YERELLAI+YA++KW  YLSH  FIIK+DQKSIK ++E++ NTPFQQ  +SKLM
Sbjct: 908  QQAMSVYERELLAIIYAVQKWGAYLSHAPFIIKTDQKSIKHILEQKLNTPFQQAWVSKLM 967

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              +FEI Y +G  N AADALSR   AELL L +  +  DL+ +I+ SW  D  L +++ +
Sbjct: 968  GFEFEIQYKEGTTNLAADALSRKEGAELLLLAIDAASPDLMTKIRDSWSKDPTLARIVTD 1027

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L+ N++S+PKF+W R ELR++GKLVIG   + +L   IL WLH+SA GGHSGRD+T  RI
Sbjct: 1028 LKSNTSSHPKFTWIRNELRRKGKLVIGA--DVSLKNTILGWLHSSAAGGHSGRDSTGARI 1085

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +S+F+WKG++KD+Q +++NC++C   K D   S G +QPLPIP+ IW  IS+DFI G P 
Sbjct: 1086 KSLFFWKGMMKDIQNFIRNCSICQTCKYDQATSPGSLQPLPIPSLIWVDISMDFIEGLPM 1145

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF*V 1386
            S GK VI VVVDRLS+YAHF++L+HP TA DVA +F+DNVFKLHGMP T+ SDRDP F  
Sbjct: 1146 SAGKQVIFVVVDRLSKYAHFMSLAHPYTAADVAQVFLDNVFKLHGMPNTITSDRDPIFLS 1205

Query: 1387 KF 1392
            +F
Sbjct: 1206 RF 1207



 Score =  355 bits (911), Expect(3) = 0.0
 Identities = 170/258 (65%), Positives = 205/258 (79%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS+ W+DLF+LQ VAL+K T YHPQ+D + E+VNK LETYLRCMCS+ P +WSKW+ 
Sbjct: 1201 PIFLSRFWNDLFTLQGVALNKSTAYHPQSDGQTEIVNKGLETYLRCMCSEKPHTWSKWLS 1260

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT+FHSAI STP+E+VYGQPPPI+LPYLPGE    T+DRT +ARE AI+LLKFH
Sbjct: 1261 LAEWWYNTNFHSAIHSTPFEIVYGQPPPIHLPYLPGESPVPTVDRTLSAREEAIQLLKFH 1320

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            LLRAQNRM  QAN+HRS R F I DFVFLKLQPYRQ S++    +KL PK+YGPFKV+DK
Sbjct: 1321 LLRAQNRML-QANQHRSHRHFEINDFVFLKLQPYRQMSLKPHRAHKLLPKYYGPFKVIDK 1379

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMV 2090
            +G  AY+LELP ++ IHNVFHVSQLK   +P   +   +P  +  IP + PE IL+RKMV
Sbjct: 1380 VGQVAYKLELPADAAIHNVFHVSQLKKCTNPSTITNPLIPTFITDIPTRIPEMILDRKMV 1439

Query: 2091 KRGHVAATKVLVKWKDLP 2144
            KRG  AATKVLV+WKD P
Sbjct: 1440 KRGSQAATKVLVQWKDTP 1457



 Score = 41.6 bits (96), Expect(3) = 0.0
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +1

Query: 2149 LATWEFCYDMLQKFPNFHP 2205
            +ATWEF YD+L+KFPNFHP
Sbjct: 1460 MATWEFYYDLLKKFPNFHP 1478


>dbj|GAU25035.1| hypothetical protein TSUD_155090 [Trifolium subterraneum]
          Length = 1326

 Score =  378 bits (970), Expect(2) = 0.0
 Identities = 182/301 (60%), Positives = 230/301 (76%)
 Frame = +1

Query: 490  QAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLMD 669
            +AMS+YERELLAI+YA++KW  YLSH  FIIK+DQKSIK +++++ NTPFQQ  +SKLM 
Sbjct: 785  RAMSVYERELLAIIYAVQKWGAYLSHAPFIIKTDQKSIKHILDQKLNTPFQQTWVSKLMG 844

Query: 670  LDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAEL 849
             +FEI Y +G  N AADALSR T A+LL LLL N+  DLL  IK SW  D  L QLI+EL
Sbjct: 845  FEFEIQYKEGSTNTAADALSRKTGADLLALLLDNAQTDLLHNIKQSWSSDPTLSQLISEL 904

Query: 850  EKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRIR 1029
            +   +++PKFSW  GELR+RGKLVIGN ++  L  AI  WLHNSA+GGHSGRD T  R++
Sbjct: 905  QVKPSAHPKFSWINGELRRRGKLVIGNVSD--LKDAIHQWLHNSAIGGHSGRDITTARVQ 962

Query: 1030 SIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPPS 1209
            S+F+WKG+ KD+Q +++NC+ C   K+D  AS GL+QPLPIP++IWE IS+DFI G PPS
Sbjct: 963  SLFFWKGMRKDIQTFIRNCSTCQTCKSDYAASPGLLQPLPIPSQIWEDISMDFIEGLPPS 1022

Query: 1210 DGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF*VK 1389
             GK  I VV+DRL +YAHF+ L HP TALDVA  F+D++FKLHGMP T+ SDRDP F  +
Sbjct: 1023 AGKQTIFVVIDRLGKYAHFIPLGHPYTALDVAQAFLDHIFKLHGMPSTITSDRDPIFLSQ 1082

Query: 1390 F 1392
            F
Sbjct: 1083 F 1083



 Score =  336 bits (861), Expect(2) = 0.0
 Identities = 155/250 (62%), Positives = 197/250 (78%), Gaps = 2/250 (0%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS+ W++ F LQ   L++ T YHPQTD + E+VNK LETYLRC+ S+ P  W KW+ 
Sbjct: 1077 PIFLSQFWTEFFKLQGTVLNRSTAYHPQTDGQTEIVNKALETYLRCVSSEKPKDWIKWLS 1136

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNTS+HSA Q+TP+E+VYGQPPP++LPYLPGE S+ T+DRT NARE AI L+KFH
Sbjct: 1137 MAEWWYNTSYHSATQTTPFEIVYGQPPPLHLPYLPGESSSPTVDRTLNAREDAINLMKFH 1196

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            L+RAQNRM QQA+  RSDR F IG+FVFLKLQPYRQSS+R   ++KL PK++GPFK+LDK
Sbjct: 1197 LMRAQNRMKQQADLRRSDRVFDIGEFVFLKLQPYRQSSVRREAYHKLLPKYFGPFKILDK 1256

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPI--KEPEAILERK 2084
            +GN AYQLELP ++ +HNVFHVSQLK   +P +   QP+ +   ++    + PEAIL+RK
Sbjct: 1257 VGNVAYQLELPQHAAVHNVFHVSQLKKCYNPSSTMFQPITSIWPNVVAANRYPEAILDRK 1316

Query: 2085 MVKRGHVAAT 2114
            MVKRG +AAT
Sbjct: 1317 MVKRGRIAAT 1326


>dbj|GAU25735.1| hypothetical protein TSUD_216660 [Trifolium subterraneum]
          Length = 1417

 Score =  385 bits (989), Expect(2) = 0.0
 Identities = 191/298 (64%), Positives = 237/298 (79%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMSIYERELLAIVYA++KW +YLSH  FIIK+DQKSIK +++++ NTPFQQV ++KL+
Sbjct: 908  QQAMSIYERELLAIVYAVQKWGSYLSHAPFIIKTDQKSIKHMLDQKLNTPFQQVWVAKLL 967

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              DFEIHY +G  N AADALSR T AELL L+LSN+  DLLE IK SW  D  L  +I +
Sbjct: 968  GFDFEIHYKEGPSNLAADALSRKTGAELLPLVLSNAGPDLLEAIKLSWPHDPHLNSIILD 1027

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L+K+  ++PKFSW RGELR++GKLVIG   +S +  +I  WLHNS++GGHSGRD TA+RI
Sbjct: 1028 LQKDPNTHPKFSWLRGELRRKGKLVIGP--DSGVKNSIFKWLHNSSLGGHSGRDITASRI 1085

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +S+FYWKG+ KD+  YV+NC VC  SK DL AS GL+QPL IP++IW  IS+DFI G PP
Sbjct: 1086 KSLFYWKGMAKDIIGYVKNCGVCQRSKPDLAASPGLLQPLSIPSQIWTDISMDFIEGLPP 1145

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            S GK VI VVVDRLS+YAHF+ L+HP TALD+A LF+DNVFKLHG+P ++ SDRDP F
Sbjct: 1146 SFGKQVIFVVVDRLSKYAHFMALAHPYTALDIAQLFLDNVFKLHGLPESITSDRDPIF 1203



 Score =  327 bits (838), Expect(2) = 0.0
 Identities = 147/217 (67%), Positives = 183/217 (84%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS  W++ F LQ VAL+K T YHPQ+D + E+VNKCLETYLRCMCS  PT WSKW+ 
Sbjct: 1201 PIFLSTFWTEFFKLQGVALNKSTAYHPQSDGQTEIVNKCLETYLRCMCSDKPTQWSKWLS 1260

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT++HS+  +TP+EVVYGQPPPI+LPYLPG   ++++DR+  ARE AIKLLKFH
Sbjct: 1261 LAEWWYNTNYHSSTHTTPFEVVYGQPPPIHLPYLPGSSDSLSVDRSLLAREEAIKLLKFH 1320

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            +LRAQNRM+QQANKHRSDR FAIGD+V+LKLQPYRQ S+++  F+KL PKFYGPF+VLD+
Sbjct: 1321 MLRAQNRMSQQANKHRSDRIFAIGDYVYLKLQPYRQLSLKSHGFHKLLPKFYGPFRVLDR 1380

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQ 2021
            +G+ AYQLELPP++ IHNVFHVSQLK   +P + S+Q
Sbjct: 1381 VGSVAYQLELPPSAAIHNVFHVSQLKLCPNPQDHSVQ 1417


>gb|PNY17582.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 1251

 Score =  366 bits (940), Expect(2) = 0.0
 Identities = 177/302 (58%), Positives = 232/302 (76%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMS+YERELLAI+YA++KW  YLSH  FIIK+DQKSIK ++E++ NTPFQQ  +SKLM
Sbjct: 705  QQAMSVYERELLAIIYAVQKWGAYLSHAPFIIKTDQKSIKHILEQKLNTPFQQAWVSKLM 764

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              +FEI Y +G  N AADALSR   AELL + L  + +DL+ +I+ SW  D  L +++ +
Sbjct: 765  GFEFEIQYKEGNTNLAADALSRKEGAELLMMALDVASDDLMTKIRNSWSSDPTLAKIVTD 824

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L+ N +S+PKF+W R ELR++GKLV+G+  + AL   IL WLH+S+ GGHSGRD+T+ RI
Sbjct: 825  LQSNPSSHPKFTWIRNELRRKGKLVVGS--DVALKNTILDWLHSSSAGGHSGRDSTSARI 882

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +SIF+WKG++KD+Q +++NC++C   K D  AS G +QPLPIP+ IW  IS+DFI G P 
Sbjct: 883  KSIFFWKGMMKDIQNFIRNCSICQTCKYDQAASPGSLQPLPIPSLIWVDISMDFIEGLPM 942

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF*V 1386
            S GK VI VVVDRLS+YAHF++L+HP TA DVA LF+DNVFKLHGMP T+ SDRDP F  
Sbjct: 943  SAGKQVIFVVVDRLSKYAHFMSLAHPYTAADVAQLFLDNVFKLHGMPNTITSDRDPIFLS 1002

Query: 1387 KF 1392
            +F
Sbjct: 1003 QF 1004



 Score =  339 bits (869), Expect(2) = 0.0
 Identities = 162/255 (63%), Positives = 198/255 (77%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS+ W+D F+LQ VAL+K T YHPQ+D + E+VNK LETYLRCMCS+ P +WSKW+ 
Sbjct: 998  PIFLSQFWNDFFTLQGVALNKSTAYHPQSDGQTEIVNKGLETYLRCMCSEKPQTWSKWLS 1057

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT+FHSAI STP+E+VYGQPPP++LPYLPGE     +DRT  ARE AIK+LKFH
Sbjct: 1058 LAEWWYNTNFHSAIHSTPFEIVYGQPPPVHLPYLPGESPVPAVDRTLGAREEAIKVLKFH 1117

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            LLRAQNRM  QA   RS+R F I DFVFLKLQPYRQ S++    +KL PK+YGPFK++DK
Sbjct: 1118 LLRAQNRML-QATLRRSNRCFKINDFVFLKLQPYRQMSLKKHKAHKLLPKYYGPFKIIDK 1176

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMV 2090
            +G  AY+LELP ++ IHNVFHVSQLK   +P   +   +P  +  IP + PE IL+RKMV
Sbjct: 1177 VGQVAYKLELPQDAAIHNVFHVSQLKKCHNPSANTTPLIPTFITDIPTRIPELILDRKMV 1236

Query: 2091 KRGHVAATKVLVKWK 2135
            KRG  AATKVLV+WK
Sbjct: 1237 KRGSQAATKVLVQWK 1251


>gb|KYP34558.1| Retrotransposable element Tf2 [Cajanus cajan]
          Length = 875

 Score =  393 bits (1010), Expect(3) = 0.0
 Identities = 189/259 (72%), Positives = 216/259 (83%), Gaps = 1/259 (0%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLSKVWSDLF LQ VAL+K T YHPQ D + EVVNKCLETYLRCMCS+ P+SWS+W+ 
Sbjct: 597  PIFLSKVWSDLFQLQGVALNKSTAYHPQFDGQTEVVNKCLETYLRCMCSEKPSSWSRWLS 656

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT+FH+AIQ+TP+EVVYGQ PPI+LPYLPGE +N  +DR+  AREAAIKLL FH
Sbjct: 657  LAEWWYNTNFHTAIQTTPFEVVYGQAPPIHLPYLPGESTNTAVDRSLTAREAAIKLLHFH 716

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            LLRAQNRM QQANKHRSDR F+IGDFV+LKLQPYRQ S+R STF+KL PK+YGPFKVLD 
Sbjct: 717  LLRAQNRMTQQANKHRSDRVFSIGDFVYLKLQPYRQHSMRHSTFHKLLPKYYGPFKVLDH 776

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIK-EPEAILERKM 2087
            IG TAYQLELP  + IHNVFHVSQLK   DP      PLP   D+   K EPEAIL++KM
Sbjct: 777  IGQTAYQLELPIAAAIHNVFHVSQLKPCRDPTTSPFHPLPVDGDAFSTKGEPEAILDQKM 836

Query: 2088 VKRGHVAATKVLVKWKDLP 2144
            VKRGH+AATKVLVKW++LP
Sbjct: 837  VKRGHIAATKVLVKWRNLP 855



 Score =  282 bits (721), Expect(3) = 0.0
 Identities = 137/221 (61%), Positives = 173/221 (78%)
 Frame = +1

Query: 718  DALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAELEKNSASNPKFSWHRGE 897
            D+LSR T AELL LLL N+   LL+QIKA W  D+ LQQ+I++L++N +S+P F+WHR E
Sbjct: 381  DSLSRLTGAELLPLLLENAQHGLLDQIKAIWLSDSTLQQIISDLKQNPSSHPNFTWHREE 440

Query: 898  LRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRIRSIFYWKGLLKDVQQYV 1077
            LR++GKLVIG   + AL   IL WLH+S +GGHSGRD TA R++S+F+WKG+LKD+QQYV
Sbjct: 441  LRRKGKLVIGE--DLALKDVILKWLHDSPLGGHSGRDVTAARVKSLFFWKGMLKDIQQYV 498

Query: 1078 QNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPPSDGKHVILVVVDRLSRY 1257
            + C +C   K +L A  GL+QPLPIP RIW+AIS+DFI G P S G+ VILVVVDRL +Y
Sbjct: 499  RKCDICQKCKPELAAYPGLLQPLPIPNRIWDAISMDFIEGLPSSAGQQVILVVVDRLRKY 558

Query: 1258 AHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            AHFL LSHP TAL VA +F+DN+FKLHGMP ++ SDRDP F
Sbjct: 559  AHFLPLSHPYTALKVAQVFLDNIFKLHGMPTSITSDRDPIF 599



 Score = 32.0 bits (71), Expect(3) = 0.0
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +1

Query: 2152 ATWEFCYDMLQKFPNFHP 2205
            A WEF YD+L KFP+FHP
Sbjct: 859  AFWEF-YDLLHKFPHFHP 875


>dbj|GAU39660.1| hypothetical protein TSUD_60270 [Trifolium subterraneum]
          Length = 1128

 Score =  371 bits (952), Expect(3) = e-180
 Identities = 179/302 (59%), Positives = 234/302 (77%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQA+S+YERELLAIVYA++KW  YLSH  F+IK+D +SIK +++++ NTPFQQ  ++KLM
Sbjct: 589  QQALSVYERELLAIVYAVQKWGAYLSHAPFVIKTDHRSIKHMLDQKLNTPFQQAWVAKLM 648

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
              DFEI Y +GV N  ADALSR   AEL++L+L++   +L + IK++WQ D  L +L +E
Sbjct: 649  GYDFEIRYKEGVSNIEADALSRKEGAELMSLILNSQSPNLFDTIKSAWQSDPFLSKLCSE 708

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L++N  SNPKF+W R ELR++GKLVIG+  +  L  AI HWLH+SA+GGHSGRD TA RI
Sbjct: 709  LQQNPTSNPKFTWIRNELRRKGKLVIGS--DPTLKAAIFHWLHDSALGGHSGRDLTAARI 766

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +S+F+WKG+ K++Q YV+NC VC  +K+DL AS  LIQPLPIP +IW  IS+DFI G P 
Sbjct: 767  KSLFFWKGMAKEIQSYVRNCGVCQRNKSDLSASPDLIQPLPIPDKIWTDISMDFIEGLPT 826

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF*V 1386
            S GK VI VVVDRLS+YAHF+ LSHP TA +VA +F+D+VFKLHG+P ++ SDRDP F  
Sbjct: 827  SAGKQVIFVVVDRLSKYAHFMALSHPYTAENVAKIFLDHVFKLHGLPDSITSDRDPIFLS 886

Query: 1387 KF 1392
            KF
Sbjct: 887  KF 888



 Score =  275 bits (704), Expect(3) = e-180
 Identities = 140/261 (53%), Positives = 171/261 (65%), Gaps = 3/261 (1%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLSK W++ F LQ V+L+K T YHPQ+D + E+VNK LETYLRCMC     +W +W+ 
Sbjct: 882  PIFLSKFWNEFFMLQGVSLNKSTAYHPQSDGQTEIVNKSLETYLRCMCGDQSKTWFQWLS 941

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            + E+WYNT+FH AI +TPYEVVYGQPPP+     PG                        
Sbjct: 942  LVEYWYNTNFHLAIHTTPYEVVYGQPPPVIYLIYPG------------------------ 977

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
                   +  QANKHRS+R F IGDFV+LKLQPYRQ S+R   ++KL PKFYGPFKVLDK
Sbjct: 978  -------LPLQANKHRSERQFDIGDFVYLKLQPYRQFSMRNQLYHKLLPKFYGPFKVLDK 1030

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPAT---LDSIPIKEPEAILER 2081
            IG  AYQL+LP + E HNVFHVSQLK   +P   + QP+P T   +D IP+     IL+R
Sbjct: 1031 IGAVAYQLDLPSSVEKHNVFHVSQLKKCPNPTTVAFQPVPTTAFQVDRIPL----LILDR 1086

Query: 2082 KMVKRGHVAATKVLVKWKDLP 2144
            KMV+RG V ATKVLV+WKD P
Sbjct: 1087 KMVRRGRVEATKVLVQWKDSP 1107



 Score = 38.5 bits (88), Expect(3) = e-180
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = +1

Query: 2152 ATWEFCYDMLQKFPNFHP 2205
            ATWE+ YD+L++FPNFHP
Sbjct: 1111 ATWEYYYDLLKRFPNFHP 1128


>dbj|GAU24592.1| hypothetical protein TSUD_289530 [Trifolium subterraneum]
          Length = 1330

 Score =  323 bits (827), Expect(3) = e-178
 Identities = 164/298 (55%), Positives = 211/298 (70%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            QQAMS+YERELLAIVYA++KW +YLSH  FIIK+DQKSIK++++++ NTPFQQV ++KL 
Sbjct: 817  QQAMSVYERELLAIVYAVQKWGSYLSHAPFIIKTDQKSIKYMLDQKLNTPFQQVWVAKLP 876

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
                                          LLLSN   +LLE I   WQ D  LQ +I +
Sbjct: 877  -----------------------------ALLLSNVDHNLLESIINHWQQDPYLQTIIHD 907

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L+K+S S+PKFSW R ELR+ GKLVI  G N+ +   IL WLH+S VGGHS RD TA+R+
Sbjct: 908  LQKDSKSHPKFSWTRDELRRNGKLVI--GANTTIKDTILTWLHSSVVGGHSVRDVTASRV 965

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            +S+FYWKG+ KD+  +V+NC +C  +K+DL A  GL+QPLP+P +IW  IS+DF+ G P 
Sbjct: 966  KSLFYWKGMTKDIFNFVKNCGICQKNKSDLAAYPGLLQPLPVPHQIWTNISMDFVEGLPT 1025

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            S GK VI VVVDRLS+YAHF+ L+HP TALDVA +F+DNVFKLHG+P ++ SDRDP F
Sbjct: 1026 SGGKQVIFVVVDRLSKYAHFMALAHPYTALDVAQVFLDNVFKLHGLPESITSDRDPIF 1083



 Score =  317 bits (812), Expect(3) = e-178
 Identities = 159/258 (61%), Positives = 187/258 (72%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS  W++ F LQ VAL+K + YHPQTD + EVVNKCLETYLRCMCS  P  W  W+ 
Sbjct: 1081 PIFLSSFWTEFFKLQGVALNKSSAYHPQTDGQTEVVNKCLETYLRCMCSDEPKKWFNWLS 1140

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT++HS+I +TP+EVVYGQPPPI+LPYLPG   N+T+DR+  ARE AIKLLKFH
Sbjct: 1141 LAEWWYNTNYHSSIHTTPFEVVYGQPPPIHLPYLPGSAENLTVDRSLMAREEAIKLLKFH 1200

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDK 1910
            LLRA NRMAQQANKHRSDR FAIGD+V+LKLQPYRQ S+++   +KL PKFYGP      
Sbjct: 1201 LLRAHNRMAQQANKHRSDRVFAIGDYVYLKLQPYRQLSMKSHGVHKLLPKFYGP------ 1254

Query: 1911 IGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMV 2090
                 YQL+L PN                 P +  +Q LPATL ++  K P AILERKMV
Sbjct: 1255 -----YQLKLCPN-----------------PQHQPVQHLPATLPTVE-KIPVAILERKMV 1291

Query: 2091 KRGHVAATKVLVKWKDLP 2144
            KRGH AATKVLV+WKD P
Sbjct: 1292 KRGHTAATKVLVQWKDSP 1309



 Score = 38.9 bits (89), Expect(3) = e-178
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +1

Query: 2152 ATWEFCYDMLQKFPNFHP 2205
            ATWEF YD+L+KFP+FHP
Sbjct: 1313 ATWEFYYDLLKKFPDFHP 1330


>ref|XP_022547700.1| uncharacterized protein LOC111200699 [Brassica napus]
          Length = 2724

 Score =  327 bits (838), Expect(2) = e-172
 Identities = 157/309 (50%), Positives = 224/309 (72%), Gaps = 3/309 (0%)
 Frame = +1

Query: 463  VCFMCIT---HQQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNT 633
            +CF+        QA+S+YE+EL+A+V+A++ W+ YL+H  FIIK+DQKS+K+++E++  T
Sbjct: 2141 ICFISRALGPRNQALSVYEKELMAVVHAVQAWSAYLAHRRFIIKTDQKSLKYMVEQKATT 2200

Query: 634  PFQQVLMSKLMDLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQ 813
            PFQ + +SKLM  DFEI Y  G  N AADALSR + ++LL + LS + +   + ++  WQ
Sbjct: 2201 PFQHMWLSKLMGYDFEIQYKLGKENVAADALSRVSGSQLLHMTLSQAHQGFYDSLRLLWQ 2260

Query: 814  DDAVLQQLIAELEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGG 993
             D  L+++I+EL+ +  S+P +++   ELR++GKLV+GN  N  +   I  WLH+SA+GG
Sbjct: 2261 SDPKLRKIISELQADPKSHPSYTFINEELRRKGKLVVGNDVN--IKTHIFRWLHDSAIGG 2318

Query: 994  HSGRDATATRIRSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEA 1173
            HSGRDAT  RI+S+F+W  +  +VQ YV+NC VC  +K +  A  GL+ PLPIP  +WE+
Sbjct: 2319 HSGRDATLHRIKSLFFWSKMSLEVQNYVRNCDVCQKNKYENVAKPGLLNPLPIPNGVWES 2378

Query: 1174 ISLDFI*GSPPSDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLT 1353
            +SLDFI G P S GKH ILVV+DRLS+ AHFL LSHP TA++VA  ++DNVFKLHG+P  
Sbjct: 2379 VSLDFIEGLPQSAGKHCILVVIDRLSKQAHFLALSHPYTAIEVAQAYLDNVFKLHGLPKD 2438

Query: 1354 VVSDRDPTF 1380
            ++SDRDPTF
Sbjct: 2439 IISDRDPTF 2447



 Score =  309 bits (792), Expect(2) = e-172
 Identities = 154/280 (55%), Positives = 195/280 (69%), Gaps = 2/280 (0%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS VW +LF +  V L   T YHPQTD + EV NK LETYLRCM ++ P +WSKW+P
Sbjct: 2445 PTFLSDVWKELFRVHGVDLSYSTAYHPQTDGQTEVTNKTLETYLRCMTAETPQTWSKWLP 2504

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT++HSAI+STP+ +VYGQPPP +LPYLPGE  +  +DR+   RE  I +LKFH
Sbjct: 2505 LAEWWYNTTYHSAIRSTPFGIVYGQPPPTHLPYLPGESKSALVDRSLQKREEVISMLKFH 2564

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIR-ASTFYKLSPKFYGPFKVLD 1907
            LLRAQNR  Q A+ HRS RSF +G +V+LKLQPYRQ+S++     +KLSP++YGPF+VLD
Sbjct: 2565 LLRAQNRNKQAADSHRSPRSFTVGSYVYLKLQPYRQNSLKNRKVPHKLSPRYYGPFRVLD 2624

Query: 1908 KIGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKM 2087
             +G+ AY+L+LP  + IHNVFHVSQLK   +P   S       +D    KEPE ILE KM
Sbjct: 2625 TVGSAAYRLDLPAGAAIHNVFHVSQLKLCPNPQAASSGLPQFYVDLGTSKEPEQILETKM 2684

Query: 2088 VKRGHVAATKVLVKWK-DLPEFGYLGVLL*YASKVSQFPP 2204
             KR + A TKVLV+WK + PE         + +K  QF P
Sbjct: 2685 AKRRNAAVTKVLVQWKGETPEQATWEFYKYFIAKHPQFHP 2724



 Score =  327 bits (839), Expect(2) = e-109
 Identities = 157/309 (50%), Positives = 224/309 (72%), Gaps = 3/309 (0%)
 Frame = +1

Query: 463  VCFMCIT---HQQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNT 633
            +CF+        QA+S+YE+EL+A+V+A++ W+ YL+H  FIIK+DQKS+K+++E++  T
Sbjct: 937  ICFISRALGPRNQALSVYEKELMAVVHAVQAWSAYLAHRRFIIKTDQKSLKYMVEQKATT 996

Query: 634  PFQQVLMSKLMDLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQ 813
            PFQ + +SKLM  DFEI Y  G  N AADALSR + ++LL + LS + +   + ++  WQ
Sbjct: 997  PFQHMWLSKLMGYDFEIQYKLGKENVAADALSRVSGSQLLHMTLSQAHQGFYDSLRLLWQ 1056

Query: 814  DDAVLQQLIAELEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGG 993
             D  L+++I+EL+ +  S+P +++   ELR++GKLV+GN  N  +   I  WLH+SA+GG
Sbjct: 1057 SDPKLRKIISELQADPKSHPSYTFINEELRRKGKLVVGNNVN--IKTHIFRWLHDSAIGG 1114

Query: 994  HSGRDATATRIRSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEA 1173
            HSGRDAT  RI+S+F+W  +  +VQ YV+NC VC  +K +  A  GL+ PLPIP  +WE+
Sbjct: 1115 HSGRDATLHRIKSLFFWSKMSLEVQNYVRNCDVCQKNKYENVAKPGLLNPLPIPNGVWES 1174

Query: 1174 ISLDFI*GSPPSDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLT 1353
            +SLDFI G P S GKH ILVV+DRLS+ AHFL LSHP TA++VA  ++DNVFKLHG+P  
Sbjct: 1175 VSLDFIEGLPQSAGKHCILVVIDRLSKQAHFLALSHPYTAIEVAQAYLDNVFKLHGLPKD 1234

Query: 1354 VVSDRDPTF 1380
            ++SDRDPTF
Sbjct: 1235 IISDRDPTF 1243



 Score = 99.8 bits (247), Expect(2) = e-109
 Identities = 42/69 (60%), Positives = 51/69 (73%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS VW +LF +  V L   T YHPQTD + EV NK LETYLRCM ++ P +WSKW+P
Sbjct: 1241 PTFLSDVWKELFRVHGVDLRYSTAYHPQTDGQTEVTNKTLETYLRCMTAETPQTWSKWLP 1300

Query: 1551 IAEWWYNTS 1577
            +AEWWYNT+
Sbjct: 1301 LAEWWYNTN 1309


>ref|XP_013658015.1| uncharacterized protein LOC106362703 [Brassica napus]
          Length = 1829

 Score =  330 bits (845), Expect(2) = e-170
 Identities = 161/309 (52%), Positives = 225/309 (72%)
 Frame = +1

Query: 454  CYLVCFMCITHQQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNT 633
            CY+   +   HQ  +S+YE+ELLA+V+A++ W+ YL+H+ FII++DQKS+KFL+E++  T
Sbjct: 923  CYISRALEKRHQ-GLSVYEKELLAVVHAVQTWSPYLAHNKFIIRTDQKSLKFLLEQKITT 981

Query: 634  PFQQVLMSKLMDLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQ 813
            PFQ + +SKLM   FEI Y QG  N AADALSR + ++LL L LS       +++K  W 
Sbjct: 982  PFQNMWLSKLMGYTFEIQYKQGKENIAADALSRVSGSQLLQLTLSQIHHGFYDELKHLWT 1041

Query: 814  DDAVLQQLIAELEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGG 993
             D  LQ++I+EL+   +S+  +++   ELR+RGKLV+GN  + ++ + I  WLH+SA+GG
Sbjct: 1042 TDPTLQKIISELQIKPSSHASYTFINDELRRRGKLVVGN--DPSVKLHIFKWLHDSAIGG 1099

Query: 994  HSGRDATATRIRSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEA 1173
            HSGRD+T  RI+S+FYW  +  +VQ YV+NC+ C  +K D  A  G++QPLP+PA +WE+
Sbjct: 1100 HSGRDSTLHRIKSLFYWPKMTLEVQNYVRNCSTCQRNKYDQAAKPGMLQPLPVPAGVWES 1159

Query: 1174 ISLDFI*GSPPSDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLT 1353
            ISLDFI G PPS GKH ILVV+DRLS+ AHFL LSHP TA+DVA  +++ VF+LHGMP  
Sbjct: 1160 ISLDFIEGLPPSAGKHCILVVIDRLSKNAHFLALSHPYTAMDVAKAYLNQVFRLHGMPKD 1219

Query: 1354 VVSDRDPTF 1380
            + SDRDPTF
Sbjct: 1220 ITSDRDPTF 1228



 Score =  299 bits (766), Expect(2) = e-170
 Identities = 148/257 (57%), Positives = 188/257 (73%), Gaps = 2/257 (0%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS+VW ++F +  V L+  T YHPQTD + EV NK LETYLRCM S  P +WS+W+P
Sbjct: 1226 PTFLSEVWREMFRVHGVNLNYSTAYHPQTDGQTEVTNKTLETYLRCMTSDAPHTWSEWLP 1285

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT++HSAI STP+EV+YGQPPP++LPYLPGE ++ T++ T   RE  I ++KFH
Sbjct: 1286 LAEWWYNTTYHSAIHSTPFEVIYGQPPPVHLPYLPGESTSPTVNNTLQRREELIDMMKFH 1345

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTF-YKLSPKFYGPFKVLD 1907
            LLRAQNRM Q A+  RS R F IG++V+LKLQPYRQ S++     +KLSP+FYGPF+V D
Sbjct: 1346 LLRAQNRMKQYADSRRSVREFEIGNYVYLKLQPYRQHSLKGRHLPHKLSPRFYGPFEVQD 1405

Query: 1908 KIGNTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSI-PIKEPEAILERK 2084
            ++G  AY+L LPP + IHNVFHVSQLK   +P   +   LP  L  I  +KEP AILE+K
Sbjct: 1406 RVGPLAYKLRLPPGAAIHNVFHVSQLKLCPNP-PTTTPTLPQYLTDIGTVKEPAAILEKK 1464

Query: 2085 MVKRGHVAATKVLVKWK 2135
            MVKR + A TK   K K
Sbjct: 1465 MVKRQNRAVTKQRCKEK 1481


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  322 bits (826), Expect(3) = e-169
 Identities = 157/260 (60%), Positives = 192/260 (73%), Gaps = 2/260 (0%)
 Frame = +3

Query: 1371 PYFLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIP 1550
            P FLS+VW +LF +  V L   T YHPQTD + EV NK LETYLRCM +  P +WSKW+P
Sbjct: 1278 PTFLSEVWRELFRVHGVDLRFSTAYHPQTDGQTEVTNKTLETYLRCMTADAPQTWSKWLP 1337

Query: 1551 IAEWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFH 1730
            +AEWWYNT+FHSAI+ TP+E+VYGQPPP++LPYLPGE S++ +DR+   RE  I +LKFH
Sbjct: 1338 LAEWWYNTTFHSAIKCTPFEIVYGQPPPVHLPYLPGESSSVVVDRSLQKREELIAMLKFH 1397

Query: 1731 LLRAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTF-YKLSPKFYGPFKVLD 1907
            LLRAQNRM Q A+ HRS R F +GDFV+LKLQPYRQ S++     +KLSP+FYGPF+V D
Sbjct: 1398 LLRAQNRMKQYADSHRSQREFQVGDFVYLKLQPYRQQSLKTKGVPHKLSPRFYGPFRVTD 1457

Query: 1908 KIGNTAYQLELPPNSEIHNVFHVSQLKYSLD-PLNCSIQPLPATLDSIPIKEPEAILERK 2084
            K+G  AY+LELP  + IHNVFHVSQLK   + P    + P   T D    KEPEAILE+K
Sbjct: 1458 KVGTVAYKLELPQGTAIHNVFHVSQLKLCPNPPSEAPVMPQYLT-DVGNAKEPEAILEKK 1516

Query: 2085 MVKRGHVAATKVLVKWKDLP 2144
            MV R + A TKVLV+WK  P
Sbjct: 1517 MVNRQNQAVTKVLVQWKGEP 1536



 Score =  295 bits (754), Expect(3) = e-169
 Identities = 150/309 (48%), Positives = 208/309 (67%)
 Frame = +1

Query: 454  CYLVCFMCITHQQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNT 633
            CY+   +   HQ A+S+YE+EL+A+V+A+                              T
Sbjct: 1004 CYISRALGPRHQ-ALSVYEKELMAVVHAV-----------------------------TT 1033

Query: 634  PFQQVLMSKLMDLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQ 813
            PFQ + +SKLM   +EI Y QG  N AADALSR T A+LL++ LS++ E L + I+  WQ
Sbjct: 1034 PFQHMWLSKLMGYTYEIQYKQGKENHAADALSRVTGAQLLSITLSHAHEGLFDSIQLLWQ 1093

Query: 814  DDAVLQQLIAELEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGG 993
             D  L ++I++++ N AS+P +S+   ELR++GKLV+GN  ++A+ + IL W+H+S  GG
Sbjct: 1094 SDPHLSKVISDIKSNPASHPAYSFVNEELRRKGKLVVGN--DAAVKLHILKWMHDSVSGG 1151

Query: 994  HSGRDATATRIRSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEA 1173
            HSGRDAT  RI+++FYW  +  +VQ Y++NC +C  +K DL AS GL+QPLP+P  +WE 
Sbjct: 1152 HSGRDATLQRIKALFYWSKMSLEVQNYIRNCQICQKNKYDLAASPGLLQPLPVPNGVWEC 1211

Query: 1174 ISLDFI*GSPPSDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLT 1353
            IS+DFI G PPS GKH ILVV+DRLS+ AHF+ LSHP TA++VA  ++DNVFKLHGMP  
Sbjct: 1212 ISMDFIEGLPPSAGKHCILVVIDRLSKNAHFMALSHPYTAIEVAQAYLDNVFKLHGMPKD 1271

Query: 1354 VVSDRDPTF 1380
            + SDRDPTF
Sbjct: 1272 ITSDRDPTF 1280



 Score = 30.8 bits (68), Expect(3) = e-169
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 2146 SLATWEFCYDMLQKFPNFHP 2205
            S ATWEF  D + K P FHP
Sbjct: 1538 SKATWEFYKDFITKHPTFHP 1557


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana]
 dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  312 bits (799), Expect(3) = e-163
 Identities = 153/302 (50%), Positives = 213/302 (70%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            Q  +SIYE+ELLA+++A++KW  YL   HFIIK+DQ+S+K+L+E+R NTP QQ  + KL+
Sbjct: 929  QLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLL 988

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
            + D+EI Y QG  N  ADALSR   +E+L + ++    DLL+ I+A + +D+ LQ +I  
Sbjct: 989  EFDYEIQYRQGKENVVADALSRVEGSEVLHMAMTVVECDLLKDIQAGYANDSQLQDIITA 1048

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L+++  S   FSW +  LR++ K+V+   +N  +   IL WLH S VGGHSGRD T  R+
Sbjct: 1049 LQRDPDSKKYFSWSQNILRRKSKIVVPANDN--IKNTILLWLHGSGVGGHSGRDVTHQRV 1106

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            + +FYWKG++KD+Q Y+++C  C   K+D  AS GL+QPLPIP  IW  +S+DFI G P 
Sbjct: 1107 KGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLPIPDTIWSEVSMDFIEGLPV 1166

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF*V 1386
            S GK VI+VVVDRLS+ AHF+ LSHP +AL VA  ++DNVFKLHG P ++VSDRD  F  
Sbjct: 1167 SGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVSDRDVVFTS 1226

Query: 1387 KF 1392
            +F
Sbjct: 1227 EF 1228



 Score =  288 bits (737), Expect(3) = e-163
 Identities = 133/256 (51%), Positives = 184/256 (71%)
 Frame = +3

Query: 1377 FLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIPIA 1556
            F S+ W + F+LQ VAL   + YHPQ+D + EVVN+CLETYLRCMC   P  WSKW+ +A
Sbjct: 1224 FTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALA 1283

Query: 1557 EWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFHLL 1736
            E+WYNT++HS+ + TP+E+VYGQ PP++LPYLPGE     + R+   RE  +  LKFHL+
Sbjct: 1284 EYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGESKVAVVARSLQEREDMLLFLKFHLM 1343

Query: 1737 RAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDKIG 1916
            RAQ+RM Q A++HR++R F IGD+V++KLQPYRQ S+      KLSPK++GP+K++D+ G
Sbjct: 1344 RAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRCG 1403

Query: 1917 NTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMVKR 2096
              AY+L LP  S++H VFHVSQLK  +  ++ ++  LP+ +  +  K PE ++ERKMV R
Sbjct: 1404 EVAYKLALPSYSQVHPVFHVSQLKVLVGNVSTTVH-LPSVMQDVFEKVPEKVVERKMVNR 1462

Query: 2097 GHVAATKVLVKWKDLP 2144
               A TKVLVKW + P
Sbjct: 1463 QGKAVTKVLVKWSNEP 1478



 Score = 27.3 bits (59), Expect(3) = e-163
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 2143 LSLATWEFCYDMLQKFPNF 2199
            L  ATWEF +D+ + FP F
Sbjct: 1479 LEEATWEFLFDLQKTFPEF 1497


>ref|XP_010491426.2| PREDICTED: uncharacterized protein LOC104769009 [Camelina sativa]
          Length = 1585

 Score =  298 bits (763), Expect(3) = e-162
 Identities = 150/298 (50%), Positives = 209/298 (70%)
 Frame = +1

Query: 487  QQAMSIYERELLAIVYAMKKWATYLSHDHFIIKSDQKSIKFLMERRRNTPFQQVLMSKLM 666
            Q  +SIYE+ELLA+V+A++KW  YL  +HFII++DQ+S+K+L+E+R NTP QQ  + KL+
Sbjct: 1003 QLNLSIYEKELLAVVFAVQKWRHYLLPNHFIIRTDQRSLKYLLEQRLNTPIQQQWLPKLL 1062

Query: 667  DLDFEIHYTQGVHNQAADALSRNTNAELLTLLLSNSMEDLLEQIKASWQDDAVLQQLIAE 846
            + D+EI Y QG  N AADALSR   AE+L + +S    DLL+ I+A +  DA L++LI +
Sbjct: 1063 EFDYEIQYRQGKDNIAADALSRVEGAEVLHMAMSVLECDLLKDIQAHYATDAELKKLIDD 1122

Query: 847  LEKNSASNPKFSWHRGELRKRGKLVIGNGNNSALNIAILHWLHNSAVGGHSGRDATATRI 1026
            L  N  +   ++W +  LR++ K+V+ N  N  L  +IL W+H S  GGH GRDAT  ++
Sbjct: 1123 LAANIPAKKHYTWTQSILRRKTKIVVPN--NIQLRDSILQWMHCSGTGGHLGRDATYQKV 1180

Query: 1027 RSIFYWKGLLKDVQQYVQNCAVC*CSKADLDASLGLIQPLPIPARIWEAISLDFI*GSPP 1206
            + +FYWKG+  D+Q+Y+++CAVC   K D  A  GL+QPLPIP  IW  +S+DFI G P 
Sbjct: 1181 KGLFYWKGMAVDIQKYIRSCAVCQQCKYDTSAYPGLLQPLPIPETIWTDLSMDFIDGLPD 1240

Query: 1207 SDGKHVILVVVDRLSRYAHFLTLSHPCTALDVA*LFIDNVFKLHGMPLTVVSDRDPTF 1380
            S GK VI VVVDRL++ AHF+ L+HP +A+ VA  F+D VFKLHG P ++VSDRD  F
Sbjct: 1241 SAGKTVIFVVVDRLTKAAHFMALAHPYSAVTVAQAFMDTVFKLHGCPRSIVSDRDTIF 1298



 Score =  288 bits (736), Expect(3) = e-162
 Identities = 139/252 (55%), Positives = 183/252 (72%)
 Frame = +3

Query: 1377 FLSKVWSDLFSLQEVALHKFTVYHPQTDRKMEVVNKCLETYLRCMCSKYPTSWSKWIPIA 1556
            F+S  W +LF+LQ V L   + YHPQ+D + EVVN+CLETYLRCMCS  P  WS W+P+A
Sbjct: 1298 FVSTFWRELFTLQGVDLKFSSAYHPQSDGQTEVVNRCLETYLRCMCSDKPHLWSSWLPLA 1357

Query: 1557 EWWYNTSFHSAIQSTPYEVVYGQPPPIYLPYLPGECSNITMDRTSNAREAAIKLLKFHLL 1736
            E+WYNT+FH+A Q +P+E VYGQ PP++LPYLPGE     + R+   RE+ + +LKFHLL
Sbjct: 1358 EFWYNTNFHTATQMSPFEAVYGQSPPVHLPYLPGESKVAVVARSLQERESMLLILKFHLL 1417

Query: 1737 RAQNRMAQQANKHRSDRSFAIGDFVFLKLQPYRQSSIRASTFYKLSPKFYGPFKVLDKIG 1916
            RAQ+RM Q A+ HR+DRSF IGD VF+K QPYRQ S+   +  KLSPK++GP+K++D+ G
Sbjct: 1418 RAQHRMKQFADSHRTDRSFEIGDSVFVKHQPYRQGSVVVRSNQKLSPKYFGPYKIVDRCG 1477

Query: 1917 NTAYQLELPPNSEIHNVFHVSQLKYSLDPLNCSIQPLPATLDSIPIKEPEAILERKMVKR 2096
              AY+L LP  S+IH VFHVSQLK  +  +  S Q LP+ +  + +K P +IL+RKMVKR
Sbjct: 1478 KVAYKLLLPGGSQIHPVFHVSQLKAVVGQVLTSTQ-LPSIVVDVLVKAPVSILDRKMVKR 1536

Query: 2097 GHVAATKVLVKW 2132
               A T VLV+W
Sbjct: 1537 QGRAVTMVLVQW 1548



 Score = 39.3 bits (90), Expect(3) = e-162
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +1

Query: 2152 ATWEFCYDMLQKFPNFHP*GQGCLRKGVL 2238
            ATWE+ YD+ +KFP F P GQG   +GV+
Sbjct: 1556 ATWEYLYDLQRKFPAFEPCGQGSPDRGVV 1584