BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00015115
         (635 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX99662.1| retrovirus-related Pol polyprotein from transposo...    75   3e-19
gb|PNY02741.1| retrovirus-related Pol polyprotein from transposo...    67   6e-17
dbj|GAU27211.1| hypothetical protein TSUD_108020 [Trifolium subt...    65   2e-16
gb|PNX92906.1| retrovirus-related Pol polyprotein from transposo...    63   3e-16
gb|PNX93094.1| histone deacetylase, partial [Trifolium pratense]       59   5e-16
gb|PNY12955.1| retrovirus-related Pol polyprotein from transposo...    62   5e-16
gb|PNY12957.1| retrovirus-related Pol polyprotein from transposo...    62   5e-16
gb|PNY10806.1| histone deacetylase [Trifolium pratense]                66   1e-15
gb|KYP56497.1| Retrovirus-related Pol polyprotein from transposo...    56   1e-15
gb|PNX93770.1| histone deacetylase [Trifolium pratense]                60   2e-15
gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense]       62   2e-15
gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]       60   2e-15
dbj|GAU49672.1| hypothetical protein TSUD_91100 [Trifolium subte...    64   4e-15
gb|PNX94499.1| retrovirus-related Pol polyprotein from transposo...    60   5e-15
dbj|GAU35295.1| hypothetical protein TSUD_54540 [Trifolium subte...    45   7e-15
gb|OIW12049.1| hypothetical protein TanjilG_24473 [Lupinus angus...    65   7e-15
gb|PNY04633.1| retrovirus-related Pol polyprotein from transposo...    63   8e-15
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...    55   1e-14
gb|KYP71144.1| Retrovirus-related Pol polyprotein from transposo...    55   1e-14
gb|KYP62066.1| Retrovirus-related Pol polyprotein from transposo...    55   5e-14

>gb|PNX99662.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1046

 Score = 75.1 bits (183), Expect(2) = 3e-19
 Identities = 56/134 (41%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
 Frame = -1

Query: 380  ANILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YIS--VSQMSTR 207
            AN+  AK IS+ MV+  KL +FGT  + DPH Y SIV A QY TLTR  I+  V++M   
Sbjct: 791  ANMAEAKGISTPMVSSLKLSRFGTDTLPDPHEYRSIVGALQYVTLTRPEIAFCVNKMCQF 850

Query: 206  FANSRQILWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILGLLCDS------DD*RS 45
             AN     W   + +   + +   H+     P+A    S F +    DS      DD RS
Sbjct: 851  LANPLLSHWQAVKRILR-YLLSTCHLGLLLQPSAAV--SKFSIRAYSDSDWASDLDDRRS 907

Query: 44   TSGCCIFNGPNLVS 3
            TSG CIF GPNLVS
Sbjct: 908  TSGSCIFFGPNLVS 921



 Score = 48.1 bits (113), Expect(2) = 3e-19
 Identities = 28/70 (40%), Positives = 39/70 (55%)
 Frame = -2

Query: 595 SLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLYFLVP 416
           +LY L YVD+                 LN++ ++K +G+ D+FLG+EVKHL      L  
Sbjct: 721 TLYVLVYVDDILLTGSSSALLHDLILKLNSQFALKHMGKPDYFLGIEVKHLHNGSILL-- 778

Query: 415 TQVKYIQDLL 386
           TQ KYI+DLL
Sbjct: 779 TQSKYIRDLL 788


>gb|PNY02741.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1054

 Score = 67.0 bits (162), Expect(2) = 6e-17
 Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
 Frame = -1

Query: 380  ANILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YIS--VSQMSTR 207
            AN+  AK I++ MV+  KL +FG+  + DPH Y SIV A QY TLTR  I+  V+++   
Sbjct: 906  ANMAEAKGINTPMVSSLKLSRFGSDSLPDPHEYRSIVGALQYVTLTRPEIAFCVNKVCQF 965

Query: 206  FANSRQILWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILGLLCDS------DD*RS 45
             +N     W   + +   + +   H      P++    S F +    DS      DD RS
Sbjct: 966  LSNPLLTHWQAVKRILR-YLLHTCHHGLLLKPSSAV--SKFSINAYSDSDWASDLDDRRS 1022

Query: 44   TSGCCIFNGPNLVS 3
            TSG CIF GPNLVS
Sbjct: 1023 TSGSCIFFGPNLVS 1036



 Score = 48.5 bits (114), Expect(2) = 6e-17
 Identities = 28/70 (40%), Positives = 38/70 (54%)
 Frame = -2

Query: 595  SLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLYFLVP 416
            +LY L YVD+                 LN++ ++K +G  D+FLG+EV HLP     L  
Sbjct: 836  TLYVLVYVDDILLTGSSSSLLQDLISKLNSQFALKHMGRPDYFLGIEVHHLPNGNMLL-- 893

Query: 415  TQVKYIQDLL 386
            TQ KYI+DLL
Sbjct: 894  TQSKYIRDLL 903


>dbj|GAU27211.1| hypothetical protein TSUD_108020 [Trifolium subterraneum]
          Length = 967

 Score = 64.7 bits (156), Expect(2) = 2e-16
 Identities = 49/128 (38%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
 Frame = -1

Query: 377  NILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTRF 204
            N+   K I S MV+  KL KFGT  +SDP LY S V A QYATLTR  I  SV+++    
Sbjct: 744  NMENCKAIGSPMVSSCKLSKFGTDSMSDPSLYRSTVGALQYATLTRPDISFSVNKVCQFM 803

Query: 203  ANSRQILWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILG---LLCDSDD*RSTSGC 33
            AN  +  W   + +         H       ++    S+          D DD RSTSG 
Sbjct: 804  ANPLETHWKAVKRILRYLKGTSNHGLLLHPSSSSPPFSLRTYSDADWATDQDDRRSTSGS 863

Query: 32   CIFNGPNL 9
            CI+ GPNL
Sbjct: 864  CIYFGPNL 871



 Score = 49.3 bits (116), Expect(2) = 2e-16
 Identities = 27/68 (39%), Positives = 39/68 (57%)
 Frame = -2

Query: 589 YFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLYFLVPTQ 410
           Y L YVD+                 LN + ++KQLGE+D+FLG+EV H+P+    L+  Q
Sbjct: 675 YVLIYVDDILITGSTPHLIHDLIHKLNVKFALKQLGEVDYFLGIEVHHMPS--GDLLLNQ 732

Query: 409 VKYIQDLL 386
            KY++DLL
Sbjct: 733 SKYVRDLL 740


>gb|PNX92906.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1196

 Score = 62.8 bits (151), Expect(2) = 3e-16
 Identities = 52/130 (40%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
 Frame = -1

Query: 362  KRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTRFANSRQ 189
            K I S MV+  +L KFGT  +SDP LY S V A QYATLTR  I  SV+++    AN  +
Sbjct: 946  KAIGSPMVSSCRLSKFGTDSMSDPSLYRSTVGALQYATLTRPDISYSVNKVCQFMANPLE 1005

Query: 188  ILWNPTRGLSSVF*VPQRH--------ISAWFSPTACAS*SIFILGLLCDSDD*RSTSGC 33
              W   + +         H         S  FS  A +           D DD RSTSG 
Sbjct: 1006 THWKAVKRILRYLKGTSNHGLLIHPSPSSPPFSLRAYSD-----ADWATDQDDRRSTSGS 1060

Query: 32   CIFNGPNLVS 3
            CIF G NLVS
Sbjct: 1061 CIFFGSNLVS 1070



 Score = 50.4 bits (119), Expect(2) = 3e-16
 Identities = 30/74 (40%), Positives = 41/74 (55%)
 Frame = -2

Query: 607  QHFSSLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLY 428
            Q  +  Y L YVD+                 LN + S+KQLGE+D+FLG+EV H+P+   
Sbjct: 866  QQGACTYVLIYVDDILITGSAPHLIQDLIHKLNIQFSLKQLGEVDYFLGIEVHHMPS--G 923

Query: 427  FLVPTQVKYIQDLL 386
             L+  Q KYI+DLL
Sbjct: 924  GLLLNQSKYIKDLL 937


>gb|PNX93094.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1513

 Score = 58.5 bits (140), Expect(2) = 5e-16
 Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
 Frame = -1

Query: 377  NILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTRF 204
            N+   K I S MV+  KL KFGT  ++DP LY S V A QYATLTR  I  SV+++    
Sbjct: 1256 NMDNCKPIGSPMVSNCKLSKFGTDAMTDPSLYRSTVGALQYATLTRPDIAFSVNKVCQFM 1315

Query: 203  ANSRQILWNPTRGL-----SSVF*VPQRHISAWFSPTACAS*SIFILGLLCDSDD*RSTS 39
            A+  +  W   + +      +V      H S    P +  + S        D DD RSTS
Sbjct: 1316 AHPLETHWKAVKRILRYLKGTVTHGLLLHPSPSSPPFSLRAYS--DADWANDQDDRRSTS 1373

Query: 38   GCCIFNGPNLVS 3
            G CI+ G NL+S
Sbjct: 1374 GSCIYFGSNLIS 1385



 Score = 53.9 bits (128), Expect(2) = 5e-16
 Identities = 29/74 (39%), Positives = 41/74 (55%)
 Frame = -2

Query: 607  QHFSSLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLY 428
            QH +  Y L YVD+                 LN + ++KQLGE+D+FLG+EV H+P+   
Sbjct: 1181 QHGACTYILIYVDDILITGSAPHLIKSVIQKLNTKFALKQLGEVDYFLGIEVHHMPSGSL 1240

Query: 427  FLVPTQVKYIQDLL 386
             L   Q KY++DLL
Sbjct: 1241 LL--NQSKYVKDLL 1252


>gb|PNY12955.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score = 62.4 bits (150), Expect(2) = 5e-16
 Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
 Frame = -1

Query: 377 NILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTRF 204
           N+   K I S MV+  +L KFGT  +SDP LY S V A QYATLTR  I  SV+++    
Sbjct: 278 NMENCKPIGSPMVSSCRLSKFGTDAMSDPSLYRSTVGALQYATLTRPDIAFSVNKVCQFM 337

Query: 203 ANSRQILWNPTRGLSSVF*VPQRH---ISAWFSPTACAS*SIFILGLLCDSDD*RSTSGC 33
           A+  +  W   + +         H   ++   S    +  +        D DD RSTSG 
Sbjct: 338 AHPLETHWKAVKRILRYLKGTTTHGLLLNPSPSGPPFSLRAYSDADWATDQDDRRSTSGS 397

Query: 32  CIFNGPNLVS 3
           CI+ GPNL+S
Sbjct: 398 CIYFGPNLIS 407



 Score = 50.1 bits (118), Expect(2) = 5e-16
 Identities = 29/74 (39%), Positives = 42/74 (56%)
 Frame = -2

Query: 607 QHFSSLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLY 428
           Q  +  Y L YVD+                 LN++ ++KQLGE+D+FLG+EV H+P+   
Sbjct: 203 QQGACTYVLIYVDDILITGSAPHLIKDLIHKLNSQFALKQLGEVDYFLGIEVHHMPS--G 260

Query: 427 FLVPTQVKYIQDLL 386
            L+  Q KYI+DLL
Sbjct: 261 GLLLNQSKYIRDLL 274


>gb|PNY12957.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 349

 Score = 62.4 bits (150), Expect(2) = 5e-16
 Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
 Frame = -1

Query: 377 NILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTRF 204
           N+   K I S MV+  +L KFGT  +SDP LY S V A QYATLTR  I  SV+++    
Sbjct: 92  NMENCKPIGSPMVSSCRLSKFGTDAMSDPSLYRSTVGALQYATLTRPDIAFSVNKVCQFM 151

Query: 203 ANSRQILWNPTRGLSSVF*VPQRH---ISAWFSPTACAS*SIFILGLLCDSDD*RSTSGC 33
           A+  +  W   + +         H   ++   S    +  +        D DD RSTSG 
Sbjct: 152 AHPLETHWKAVKRILRYLKGTTTHGLLLNPSPSGPPFSLRAYSDADWATDQDDRRSTSGS 211

Query: 32  CIFNGPNLVS 3
           CI+ GPNL+S
Sbjct: 212 CIYFGPNLIS 221



 Score = 50.1 bits (118), Expect(2) = 5e-16
 Identities = 29/74 (39%), Positives = 42/74 (56%)
 Frame = -2

Query: 607 QHFSSLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLY 428
           Q  +  Y L YVD+                 LN++ ++KQLGE+D+FLG+EV H+P+   
Sbjct: 17  QQGACTYVLIYVDDILITGSAPHLIKDLIHKLNSQFALKQLGEVDYFLGIEVHHMPS--G 74

Query: 427 FLVPTQVKYIQDLL 386
            L+  Q KYI+DLL
Sbjct: 75  GLLLNQSKYIRDLL 88


>gb|PNY10806.1| histone deacetylase [Trifolium pratense]
          Length = 1441

 Score = 65.9 bits (159), Expect(2) = 1e-15
 Identities = 52/131 (39%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
 Frame = -1

Query: 380  ANILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YISVSQMSTRFA 201
            AN+  AK I++ MV+  KL KFGT  + DP  Y SIV A QY TLTR  I+         
Sbjct: 1184 ANMADAKGINTPMVSSLKLSKFGTDELPDPLEYRSIVGALQYVTLTRPDIAFCVNKVCQF 1243

Query: 200  NSRQIL--WNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILG---LLCDSDD*RSTSG 36
             SR +L  W   + +         H        A +  SI          D DD RSTSG
Sbjct: 1244 LSRPLLSHWQAVKRILRYLLHTSSHGLLLQPSQAVSKFSIRAYSDSDWASDMDDRRSTSG 1303

Query: 35   CCIFNGPNLVS 3
            CC+F GPNLVS
Sbjct: 1304 CCVFFGPNLVS 1314



 Score = 45.1 bits (105), Expect(2) = 1e-15
 Identities = 25/70 (35%), Positives = 40/70 (57%)
 Frame = -2

Query: 595  SLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLYFLVP 416
            ++Y L YVD+                 L+++ ++K +G  D+FLG+EV++LP+    L  
Sbjct: 1114 TMYVLVYVDDILLTGSSSPILHDLIAKLHSQFALKHMGRPDYFLGIEVRYLPSGNILL-- 1171

Query: 415  TQVKYIQDLL 386
            TQ KYI+DLL
Sbjct: 1172 TQSKYIRDLL 1181


>gb|KYP56497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 391

 Score = 55.8 bits (133), Expect(2) = 1e-15
 Identities = 46/129 (35%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
 Frame = -1

Query: 365 AKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YIS--VSQMSTRFANSR 192
           A  ISS M++  KL K G  +  DP LY S+V A QYATLTR  IS  V+++    AN  
Sbjct: 138 AHPISSPMLSGCKLSKTGADLFHDPTLYRSVVGALQYATLTRPEISFAVNKVCQFMANPL 197

Query: 191 QILWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILGLLCDS------DD*RSTSGCC 30
              W   + +       +  +S      +      F +  +CDS      DD +STSG  
Sbjct: 198 DSHWVAVKRILRYL---KGTLSHGLHMKSVVLGKPFSITAMCDSDWASDIDDRKSTSGSA 254

Query: 29  IFNGPNLVS 3
           I+ GPNL+S
Sbjct: 255 IYLGPNLIS 263



 Score = 55.1 bits (131), Expect(2) = 1e-15
 Identities = 30/69 (43%), Positives = 41/69 (59%)
 Frame = -2

Query: 592 LYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLYFLVPT 413
           ++ L YVD+                 LN+  S+KQLG+LD+FLG+++KHLP     L+ T
Sbjct: 64  IFLLVYVDDIIITGSSSQFIQQITDQLNSTFSLKQLGQLDYFLGIKIKHLPD--KSLLMT 121

Query: 412 QVKYIQDLL 386
           Q KYIQDLL
Sbjct: 122 QSKYIQDLL 130


>gb|PNX93770.1| histone deacetylase [Trifolium pratense]
          Length = 1453

 Score = 60.1 bits (144), Expect(2) = 2e-15
 Identities = 49/130 (37%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
 Frame = -1

Query: 362  KRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTRFANSRQ 189
            K I S MV+  +L KFGT  +SDP LY S V A QYATLTR  I  SV+++    +N  +
Sbjct: 1203 KAIGSPMVSSCRLSKFGTDSMSDPSLYRSTVGALQYATLTRPDISYSVNKVCQFMSNPLE 1262

Query: 188  ILWNPTRGLSSVF*VPQRH--------ISAWFSPTACAS*SIFILGLLCDSDD*RSTSGC 33
              W   + +         H         S  FS  A +           D DD RSTSG 
Sbjct: 1263 THWKAVKRILRYLKGTSNHGLLLHPSPSSPPFSLRAYSD-----ADWATDQDDRRSTSGS 1317

Query: 32   CIFNGPNLVS 3
            CI+ G NL+S
Sbjct: 1318 CIYFGSNLIS 1327



 Score = 50.4 bits (119), Expect(2) = 2e-15
 Identities = 30/74 (40%), Positives = 41/74 (55%)
 Frame = -2

Query: 607  QHFSSLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLY 428
            Q  +  Y L YVD+                 LN + S+KQLGE+D+FLG+EV H+P+   
Sbjct: 1123 QQGACTYVLIYVDDILITGSAPHLIQDLIHKLNIQFSLKQLGEVDYFLGIEVHHMPS--G 1180

Query: 427  FLVPTQVKYIQDLL 386
             L+  Q KYI+DLL
Sbjct: 1181 GLLLNQSKYIKDLL 1194


>gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1438

 Score = 62.4 bits (150), Expect(2) = 2e-15
 Identities = 52/133 (39%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
 Frame = -1

Query: 377  NILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTRF 204
            N+   K I S MV+  +L KFGT  +SDP LY S V A QYATLTR  I  SV+++    
Sbjct: 1191 NMDNCKPIGSPMVSTCRLSKFGTDALSDPSLYRSTVGALQYATLTRPDIAFSVNKVCQYM 1250

Query: 203  ANSRQILWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILGLLCDS------DD*RST 42
            A+  +  W   + +  +    Q  IS     +  +S   F L    D+      DD RST
Sbjct: 1251 AHPLESHW---KAVKRILRYLQGTISHGLLLSPSSSSPPFSLRAYSDADWATDQDDRRST 1307

Query: 41   SGCCIFNGPNLVS 3
            SG CI+ G NLVS
Sbjct: 1308 SGSCIYFGSNLVS 1320



 Score = 47.8 bits (112), Expect(2) = 2e-15
 Identities = 28/74 (37%), Positives = 39/74 (52%)
 Frame = -2

Query: 607  QHFSSLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLY 428
            Q  +  Y L YVD+                 LN + ++KQLGE+D+FLG+EV H+ +   
Sbjct: 1116 QQGACTYVLIYVDDILITGSSSQLIEDLIHKLNIQFALKQLGEIDYFLGIEVHHMSSGAL 1175

Query: 427  FLVPTQVKYIQDLL 386
             L   Q KYI+DLL
Sbjct: 1176 LL--NQSKYIKDLL 1187


>gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1418

 Score = 59.7 bits (143), Expect(2) = 2e-15
 Identities = 51/135 (37%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
 Frame = -1

Query: 377  NILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTRF 204
            N+   K I S MV+  KL KFGT +++DP LY S V A QYATLTR  I  SV+++    
Sbjct: 1176 NMENCKPIGSPMVSSCKLSKFGTDVMTDPTLYRSTVGALQYATLTRPDISYSVNKVCQFM 1235

Query: 203  ANSRQILWNPTR--------GLSSVF*VPQRHISAWFSPTACAS*SIFILGLLCDSDD*R 48
            A+  +  W   +         L+    +     S  FS  A +           D DD R
Sbjct: 1236 AHPLESHWKAVKRILRYLKGTLNYGLLLQPSPSSPPFSLRAYSD-----ADWATDQDDRR 1290

Query: 47   STSGCCIFNGPNLVS 3
            STSG CI+ G NLVS
Sbjct: 1291 STSGSCIYFGSNLVS 1305



 Score = 50.4 bits (119), Expect(2) = 2e-15
 Identities = 29/74 (39%), Positives = 41/74 (55%)
 Frame = -2

Query: 607  QHFSSLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLY 428
            QH +  Y L YVD+                 LN + ++KQLGE+D+FLG+EV H P+   
Sbjct: 1101 QHGACTYVLVYVDDILITGSDSQLVKDLIHKLNIKFALKQLGEVDYFLGIEVHHKPS--G 1158

Query: 427  FLVPTQVKYIQDLL 386
             L+  Q KY++DLL
Sbjct: 1159 GLLLHQSKYVKDLL 1172


>dbj|GAU49672.1| hypothetical protein TSUD_91100 [Trifolium subterraneum]
          Length = 1380

 Score = 63.5 bits (153), Expect(2) = 4e-15
 Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
 Frame = -1

Query: 380  ANILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTR 207
            A++ GA  + + MV+  KL K G+  V DP LY SIV A QYATLTR  I  SV+++   
Sbjct: 1115 AHMEGANGMPTPMVSTLKLSKVGSVPVEDPTLYRSIVGALQYATLTRPEIAYSVNKVCQF 1174

Query: 206  FANSRQILWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILGL-----LCDSDD*RST 42
             +N  +  W   + +         H        A     + ++G        D DD RST
Sbjct: 1175 LSNPLEEHWKAVKRILRYLSGTLHH--GLLIQAAPHGNPMSLIGFCDADWASDPDDRRST 1232

Query: 41   SGCCIFNGPNLVS 3
            SG CIF GPNLVS
Sbjct: 1233 SGACIFVGPNLVS 1245



 Score = 45.8 bits (107), Expect(2) = 4e-15
 Identities = 28/69 (40%), Positives = 36/69 (52%)
 Frame = -2

Query: 592  LYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLYFLVPT 413
            L  L YVD+                 L A  ++KQLG+LD+FLG+EV HL      L  +
Sbjct: 1046 LIVLVYVDDIIITGSSLPHIQHLITKLKAEFALKQLGDLDYFLGIEVFHLANGALLL--S 1103

Query: 412  QVKYIQDLL 386
            Q KYI+DLL
Sbjct: 1104 QTKYIRDLL 1112


>gb|PNX94499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1434

 Score = 59.7 bits (143), Expect(2) = 5e-15
 Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
 Frame = -1

Query: 377  NILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTRF 204
            N+   K I S MV+  +L KFGT  ++DP LY S V A QYATLTR  I  SV+++    
Sbjct: 1237 NMDNCKPIGSPMVSTCRLSKFGTDAMTDPSLYRSTVGALQYATLTRPDIAFSVNKVCQFM 1296

Query: 203  ANSRQILWNPTRGLSSVF*VPQRH-ISAWFSPTA--CAS*SIFILGLLCDSDD*RSTSGC 33
            A+  +  W   + +         H +    SPT+   +  +        D DD RSTSG 
Sbjct: 1297 AHPLETHWKAVKRILRYLKGTSSHGLLLHPSPTSPPFSLRAYSDADWATDQDDRRSTSGS 1356

Query: 32   CIFNGPNLVS 3
            CI+ G NL+S
Sbjct: 1357 CIYFGSNLIS 1366



 Score = 49.3 bits (116), Expect(2) = 5e-15
 Identities = 29/74 (39%), Positives = 41/74 (55%)
 Frame = -2

Query: 607  QHFSSLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLY 428
            Q  +  Y L YVD+                 LN + ++KQLGE+D+FLG+EV H+P+   
Sbjct: 1162 QQGACTYVLIYVDDILITGSAPHLIQDVIHKLNIQFALKQLGEVDYFLGIEVHHMPS--G 1219

Query: 427  FLVPTQVKYIQDLL 386
             L+  Q KYI+DLL
Sbjct: 1220 GLLLNQSKYIRDLL 1233


>dbj|GAU35295.1| hypothetical protein TSUD_54540 [Trifolium subterraneum]
          Length = 1046

 Score = 45.1 bits (105), Expect(3) = 7e-15
 Identities = 28/74 (37%), Positives = 38/74 (51%)
 Frame = -2

Query: 607 QHFSSLYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLY 428
           Q  +  Y L YVD+                 LN + ++KQLGE+D+FLG++V H      
Sbjct: 760 QQGACTYVLVYVDDILITGSTPLLIKDLIHKLNVQFALKQLGEVDYFLGIQVHH--NTSG 817

Query: 427 FLVPTQVKYIQDLL 386
            L+  Q KYIQDLL
Sbjct: 818 GLLLHQSKYIQDLL 831



 Score = 43.1 bits (100), Expect(3) = 7e-15
 Identities = 25/47 (53%), Positives = 29/47 (61%)
 Frame = -1

Query: 362 KRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YISVS 222
           K I S MV   KL ++GT  + DP LY S V A QYATLTR  I+ S
Sbjct: 840 KPIGSPMVNNCKLSRYGTDAMQDPSLYRSTVGALQYATLTRPDIAYS 886



 Score = 40.0 bits (92), Expect(3) = 7e-15
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -3

Query: 219 NVNKVCQFKANPLESHQRAIKRILSASKAHFS 124
           + NKVCQF ++PLESH +A+KRIL   K   S
Sbjct: 886 SANKVCQFMSHPLESHWKAVKRILRYLKGTIS 917


>gb|OIW12049.1| hypothetical protein TanjilG_24473 [Lupinus angustifolius]
          Length = 398

 Score = 65.1 bits (157), Expect(2) = 7e-15
 Identities = 53/133 (39%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
 Frame = -1

Query: 380 ANILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YI--SVSQMSTR 207
           AN+  AK I+S MV   KL K G+  + +P LY SIV A QYAT+TR  I  SV+++   
Sbjct: 133 ANMSNAKPINSPMVHTVKLTKEGSNHLENPSLYRSIVGALQYATITRPDIAYSVNKVCQF 192

Query: 206 FANSRQILWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILGL-----LCDSDD*RST 42
            AN  +  W+  + +       Q H    F PT  AS  + I G        D DD +ST
Sbjct: 193 LANPLEEHWSAVKRILRYLVGTQNH-GIIFQPTIPAS-PLPITGFCDADWASDCDDRKST 250

Query: 41  SGCCIFNGPNLVS 3
           SG CIF G NL++
Sbjct: 251 SGACIFLGNNLIT 263



 Score = 43.5 bits (101), Expect(2) = 7e-15
 Identities = 26/69 (37%), Positives = 37/69 (53%)
 Frame = -2

Query: 592 LYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLYFLVPT 413
           ++ L YVD+                 L+   ++KQLG LD+FLG+EVK L     FL  +
Sbjct: 64  IHVLVYVDDIVITGSSIEQIRKIITQLSTTFALKQLGTLDYFLGIEVKSLSDGRLFL--S 121

Query: 412 QVKYIQDLL 386
           Q KY++DLL
Sbjct: 122 QSKYVRDLL 130


>gb|PNY04633.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 804

 Score = 62.8 bits (151), Expect(2) = 8e-15
 Identities = 48/126 (38%), Positives = 61/126 (48%)
 Frame = -1

Query: 380 ANILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YISVSQMSTRFA 201
           AN+  +K + S MV+  +L KFGT  ++D  LY SIV A QYATLTR  I+ S      A
Sbjct: 607 ANMEESKPVGSPMVSSCRLSKFGTDSMADLTLYRSIVGALQYATLTRPDIAFSVNKPWSA 666

Query: 200 NSRQILWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILGLLCDSDD*RSTSGCCIFN 21
           N                  P  H S+   P       ++      D DD RSTSG CI+ 
Sbjct: 667 NQ-----------------PLHHQSSILPP------CLYDADWATDHDDRRSTSGSCIYF 703

Query: 20  GPNLVS 3
           GPNL+S
Sbjct: 704 GPNLIS 709



 Score = 45.4 bits (106), Expect(2) = 8e-15
 Identities = 21/42 (50%), Positives = 31/42 (73%)
 Frame = -2

Query: 511 NARLSVKQLGELDFFLGVEVKHLPTVLYFLVPTQVKYIQDLL 386
           N + ++K+LGE+D+FLG+EV HLP+    L   Q KY++DLL
Sbjct: 565 NVQFALKRLGEVDYFLGLEVHHLPSGALLL--NQTKYVRDLL 604


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1268

 Score = 55.1 bits (131), Expect(2) = 1e-14
 Identities = 30/69 (43%), Positives = 41/69 (59%)
 Frame = -2

Query: 592  LYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLYFLVPT 413
            ++ L YVD+                 LN+  S+KQLG+LD+FLG+E+KHLP     L+ T
Sbjct: 1002 IFLLVYVDDIIITGSSSQFIQQITDQLNSTFSLKQLGQLDYFLGIEIKHLPD--KSLLMT 1059

Query: 412  QVKYIQDLL 386
            Q KYI+DLL
Sbjct: 1060 QSKYIRDLL 1068



 Score = 52.4 bits (124), Expect(2) = 1e-14
 Identities = 45/121 (37%), Positives = 54/121 (44%)
 Frame = -1

Query: 365  AKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YISVSQMSTRFANSRQI 186
            A  ISS M++  KL K G  +  DP LY S+V A QYATLTR  IS +       N    
Sbjct: 1076 AHPISSPMLSGCKLSKSGADLFHDPTLYRSVVGALQYATLTRPEISFA------VNKVCQ 1129

Query: 185  LWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILGLLCDSDD*RSTSGCCIFNGPNLV 6
             W P       F +     S W S                D DD +STSG  I+ GPNL+
Sbjct: 1130 SWKP-------FSITAMCDSDWAS----------------DIDDRKSTSGSAIYLGPNLI 1166

Query: 5    S 3
            S
Sbjct: 1167 S 1167


>gb|KYP71144.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 438

 Score = 55.1 bits (131), Expect(2) = 1e-14
 Identities = 30/69 (43%), Positives = 41/69 (59%)
 Frame = -2

Query: 592 LYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLYFLVPT 413
           ++ L YVD+                 LN+  S+KQLG+LD+FLG+E+KHLP     L+ T
Sbjct: 172 IFLLVYVDDIIITGSSSQFIQQITDQLNSTFSLKQLGQLDYFLGIEIKHLPD--KSLLMT 229

Query: 412 QVKYIQDLL 386
           Q KYI+DLL
Sbjct: 230 QSKYIRDLL 238



 Score = 52.4 bits (124), Expect(2) = 1e-14
 Identities = 45/121 (37%), Positives = 54/121 (44%)
 Frame = -1

Query: 365 AKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YISVSQMSTRFANSRQI 186
           A  ISS M++  KL K G  +  DP LY S+V A QYATLTR  IS +       N    
Sbjct: 246 AHPISSPMLSGCKLSKSGADLFHDPTLYRSVVGALQYATLTRPEISFA------VNKVCQ 299

Query: 185 LWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILGLLCDSDD*RSTSGCCIFNGPNLV 6
            W P       F +     S W S                D DD +STSG  I+ GPNL+
Sbjct: 300 SWKP-------FSITAMCDSDWAS----------------DIDDRKSTSGSAIYLGPNLI 336

Query: 5   S 3
           S
Sbjct: 337 S 337


>gb|KYP62066.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 373

 Score = 55.5 bits (132), Expect(2) = 5e-14
 Identities = 30/69 (43%), Positives = 41/69 (59%)
 Frame = -2

Query: 592 LYFLTYVDEXXXXXXXXXXXXXXXXXLNARLSVKQLGELDFFLGVEVKHLPTVLYFLVPT 413
           ++ L YVD+                 LN+  S+KQLG+LD+FLG+E+KHLP     L+ T
Sbjct: 165 IFLLVYVDDIIITGSSSQFIQQITDQLNSTFSLKQLGQLDYFLGIEIKHLPN--KSLLMT 222

Query: 412 QVKYIQDLL 386
           Q KYI+DLL
Sbjct: 223 QSKYIRDLL 231



 Score = 50.1 bits (118), Expect(2) = 5e-14
 Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
 Frame = -1

Query: 377 NILGAKRISSSMVTYFKLGKFGTYIVSDPHLYWSIVRASQYATLTR*YIS--VSQMSTRF 204
           +++ A  ISSSM++ +KL KFG  +  DP  Y  +V   QYATLTR  IS  V+++    
Sbjct: 235 SMVEAHPISSSMLSGYKLSKFGADLFQDPTPYRLVVGVFQYATLTRPEISFAVNKVCQFM 294

Query: 203 ANSRQILWNPTRGLSSVF*VPQRHISAWFSPTACAS*SIFILGLLCDSDD*RSTSGCCIF 24
           AN     W  TR  + +      +   WF   +             D DD + TS   I+
Sbjct: 295 ANP----WILTRWQTFL-----HYSYVWFYWAS-------------DIDDKKCTSSSAIY 332

Query: 23  NGPNLVS 3
            GPNL+S
Sbjct: 333 LGPNLIS 339