BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00010513
         (1084 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX76161.1| retrovirus-related Pol polyprotein from transposo...   438   e-149
gb|PNX77046.1| retrovirus-related Pol polyprotein from transposo...   439   e-149
gb|PNX78102.1| retrovirus-related Pol polyprotein from transposo...   439   e-149
gb|PNX84939.1| retrovirus-related Pol polyprotein from transposo...   438   e-148
gb|PNY12955.1| retrovirus-related Pol polyprotein from transposo...   439   e-148
gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposo...   437   e-148
gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposo...   456   e-145
gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposo...   431   e-145
gb|PNX99662.1| retrovirus-related Pol polyprotein from transposo...   446   e-145
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   446   e-145
gb|PNX95703.1| retrovirus-related Pol polyprotein from transposo...   443   e-144
gb|PNY02741.1| retrovirus-related Pol polyprotein from transposo...   445   e-144
gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposo...   426   e-144
gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposo...   427   e-144
gb|KYP67562.1| Retrovirus-related Pol polyprotein from transposo...   425   e-144
gb|PNX92906.1| retrovirus-related Pol polyprotein from transposo...   444   e-143
gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposo...   424   e-142
gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]      447   e-142
gb|PNX93473.1| retrovirus-related Pol polyprotein from transposo...   442   e-142
gb|KYP51570.1| Retrovirus-related Pol polyprotein from transposo...   421   e-142

>gb|PNX76161.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 459

 Score =  438 bits (1126), Expect = e-149
 Identities = 213/338 (63%), Positives = 256/338 (75%)
 Frame = -3

Query: 1034 EPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIGNKWVFRTKENPDGSLN 855
            EP TV  ALA P W  AMQ E+ AL  N TWSLV LP  KKAIG KW+FR KENPDG++N
Sbjct: 8    EPTTVKSALADPQWLQAMQTEFKALTDNNTWSLVPLPPHKKAIGCKWIFRIKENPDGTIN 67

Query: 854  KYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSWSIKQIDINNAFLHGFL 675
            KYKARLVAKGF Q  G D++ETF+PVIKP+T+RIILTLA+T+ W ++QIDINNAFL+G L
Sbjct: 68   KYKARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWPVQQIDINNAFLNGIL 127

Query: 674  EEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKTLLSFGFVASKCDPSLL 495
             EEVYM QP+GFE  DKSLVCKLHK+LYGLKQAPRAWY+RLT+TLL  GF+ASKCDPSL+
Sbjct: 128  HEEVYMTQPTGFESSDKSLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGFIASKCDPSLM 187

Query: 494  VYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQFEALDYFLGIEVHTVPN 315
            V   +  C           ITGS+   +Q +I +L    ALKQ   +DYFLGIEVH   +
Sbjct: 188  VLHQQGACTYVLIYVDDILITGSAPHLIQDVIQKLNFKLALKQLGEVDYFLGIEVHKTAS 247

Query: 314  GSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYFDDPSLYRSIVGALQYA 135
            G L+L QSKY+R+LL +  MD  K I +P+    +LSR+G+D   DPSLYRS VGALQYA
Sbjct: 248  GGLILNQSKYIRDLLCKTTMDNCKPIGSPMVNSCRLSRFGTDAMSDPSLYRSTVGALQYA 307

Query: 134  TITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
            T+TRP+I ++VNK CQF++ PL+SHW AVKRILRYLKG
Sbjct: 308  TLTRPDISFSVNKVCQFIAHPLESHWKAVKRILRYLKG 345


>gb|PNX77046.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 515

 Score =  439 bits (1129), Expect = e-149
 Identities = 215/348 (61%), Positives = 258/348 (74%)
 Frame = -3

Query: 1064 LHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIGNKWVFR 885
            L P       EP TV  ALA P W  AMQ E+ AL  N TWSLV LP  KKAIG KW+FR
Sbjct: 83   LKPKAFTTIFEPTTVKSALADPQWLQAMQTEFKALTDNNTWSLVPLPPHKKAIGCKWIFR 142

Query: 884  TKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSWSIKQID 705
             KENPDG++NKYKARLVAKGF Q  G D++ETF+PVIKP+T+RIILTLA+T+ W ++QID
Sbjct: 143  IKENPDGTINKYKARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWPVQQID 202

Query: 704  INNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKTLLSFGF 525
            INNAFL+G L EEVYM QP+GFE  DKSLVCKLHK+LYGLKQAPRAWY+RLT+TLL  GF
Sbjct: 203  INNAFLNGILHEEVYMTQPTGFESSDKSLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGF 262

Query: 524  VASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQFEALDYF 345
            +ASKCDPSL+V   +  C           ITGS+   +Q +I +L    ALKQ   +DYF
Sbjct: 263  IASKCDPSLMVLHQQGACTYVLIYVDDILITGSAPHLIQDVIQKLNFKLALKQLGEVDYF 322

Query: 344  LGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYFDDPSLY 165
            LGIEVH   +G L+L QSKY+R+LL +  MD  K I +P+    +LSR+G+D   DPSLY
Sbjct: 323  LGIEVHKTASGGLILNQSKYIRDLLCKTTMDNCKPIGSPMVNSCRLSRFGTDAMSDPSLY 382

Query: 164  RSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
            RS VGALQYAT+TRP+I ++VNK CQF++ PL+SHW AVKRILRYLKG
Sbjct: 383  RSTVGALQYATLTRPDISFSVNKVCQFIAHPLESHWKAVKRILRYLKG 430


>gb|PNX78102.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 535

 Score =  439 bits (1130), Expect = e-149
 Identities = 215/348 (61%), Positives = 261/348 (75%)
 Frame = -3

Query: 1064 LHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIGNKWVFR 885
            L P        P  V  ALA PHW  AMQ EY AL+ N TWSLV LP  +KAIG KW+FR
Sbjct: 10   LKPKTFTASIAPTNVKSALAEPHWLQAMQAEYKALMDNKTWSLVPLPPHRKAIGCKWIFR 69

Query: 884  TKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSWSIKQID 705
             KENPDGS+NKYKARLVAKGF Q  G D++ETF+PVIKP+T+RIILTLA+T+ WS++QID
Sbjct: 70   VKENPDGSINKYKARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWSVQQID 129

Query: 704  INNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKTLLSFGF 525
            INNAFL+G L+EEVYM QP GFE  DK+LVCKLHKALYGLKQAPRAWYDRLT+TLL  GF
Sbjct: 130  INNAFLNGILQEEVYMTQPPGFESSDKNLVCKLHKALYGLKQAPRAWYDRLTQTLLQMGF 189

Query: 524  VASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQFEALDYF 345
              S+CDPSLLV+     C           ITGS+   ++ LI +L   FALKQ   +DYF
Sbjct: 190  TKSRCDPSLLVHHQNGACTYVLVYVDDILITGSAPHLIKDLIHKLNIKFALKQLGEVDYF 249

Query: 344  LGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYFDDPSLY 165
            LG+EVH   +GS+LL QSKY+++LL +  M+  K I +P+ +  KLS++G+D  +DPSLY
Sbjct: 250  LGLEVHHSTSGSILLHQSKYIKDLLCKTKMENCKPIGSPMVSSCKLSKFGTDTMEDPSLY 309

Query: 164  RSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
            RS VGALQYAT+TRP+I ++VNK CQF++ PL+SHW AVKRILRYLKG
Sbjct: 310  RSTVGALQYATLTRPDIAFSVNKVCQFMAHPLESHWKAVKRILRYLKG 357


>gb|PNX84939.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 499

 Score =  438 bits (1126), Expect = e-148
 Identities = 213/338 (63%), Positives = 256/338 (75%)
 Frame = -3

Query: 1034 EPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIGNKWVFRTKENPDGSLN 855
            EP TV  ALA P W  AMQ E+ AL  N TWSLV LP  KKAIG KW+FR KENPDG++N
Sbjct: 77   EPTTVKSALADPQWLQAMQTEFKALTDNNTWSLVPLPPHKKAIGCKWIFRIKENPDGTIN 136

Query: 854  KYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSWSIKQIDINNAFLHGFL 675
            KYKARLVAKGF Q  G D++ETF+PVIKP+T+RIILTLA+T+ W ++QIDINNAFL+G L
Sbjct: 137  KYKARLVAKGFLQTPGFDFTETFSPVIKPVTIRIILTLAVTYKWPVQQIDINNAFLNGIL 196

Query: 674  EEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKTLLSFGFVASKCDPSLL 495
             EEVYM QP+GFE  DKSLVCKLHK+LYGLKQAPRAWY+RLT+TLL  GF+ASKCDPSL+
Sbjct: 197  HEEVYMTQPTGFESSDKSLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGFIASKCDPSLM 256

Query: 494  VYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQFEALDYFLGIEVHTVPN 315
            V   +  C           ITGS+   +Q +I +L    ALKQ   +DYFLGIEVH   +
Sbjct: 257  VLHQQGACTYVLIYVDDILITGSAPHLIQDVIQKLNFKLALKQLGEVDYFLGIEVHKTAS 316

Query: 314  GSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYFDDPSLYRSIVGALQYA 135
            G L+L QSKY+R+LL +  MD  K I +P+    +LSR+G+D   DPSLYRS VGALQYA
Sbjct: 317  GGLILNQSKYIRDLLCKTTMDNCKPIGSPMVNSCRLSRFGTDAMSDPSLYRSTVGALQYA 376

Query: 134  TITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
            T+TRP+I ++VNK CQF++ PL+SHW AVKRILRYLKG
Sbjct: 377  TLTRPDISFSVNKVCQFIAHPLESHWKAVKRILRYLKG 414


>gb|PNY12955.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 535

 Score =  439 bits (1129), Expect = e-148
 Identities = 212/348 (60%), Positives = 263/348 (75%)
 Frame = -3

Query: 1064 LHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIGNKWVFR 885
            L P       EP T+  AL  P W  AMQ EY AL+ N TWSLV LP  KKAIG KW+FR
Sbjct: 10   LKPKVFTVSLEPTTIKAALTDPKWLHAMQNEYKALMDNNTWSLVPLPPHKKAIGCKWIFR 69

Query: 884  TKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSWSIKQID 705
             KEN DG++NK+KARLVAKGF Q  G D++ETF+PVIKPIT+R+ILTLA+T+ W ++QID
Sbjct: 70   VKENSDGTVNKFKARLVAKGFLQTPGFDFTETFSPVIKPITIRVILTLAVTYKWPVQQID 129

Query: 704  INNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKTLLSFGF 525
            +NNAFL+G+L+EEVYMKQP+GFE  DKSLVCKLHK+LYGLKQAPRAWY+RLT+ LL  GF
Sbjct: 130  VNNAFLNGWLQEEVYMKQPAGFESSDKSLVCKLHKSLYGLKQAPRAWYERLTQALLQMGF 189

Query: 524  VASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQFEALDYF 345
            V SKCDPSLL++  +  C           ITGS+   ++ LI +L   FALKQ   +DYF
Sbjct: 190  VTSKCDPSLLIHYQQGACTYVLIYVDDILITGSAPHLIKDLIHKLNSQFALKQLGEVDYF 249

Query: 344  LGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYFDDPSLY 165
            LGIEVH +P+G LLL QSKY+R+LL R  M+  K I +P+ +  +LS++G+D   DPSLY
Sbjct: 250  LGIEVHHMPSGGLLLNQSKYIRDLLCRTNMENCKPIGSPMVSSCRLSKFGTDAMSDPSLY 309

Query: 164  RSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
            RS VGALQYAT+TRP+I ++VNK CQF++ PL++HW AVKRILRYLKG
Sbjct: 310  RSTVGALQYATLTRPDIAFSVNKVCQFMAHPLETHWKAVKRILRYLKG 357


>gb|KYP50410.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 538

 Score =  437 bits (1124), Expect = e-148
 Identities = 218/360 (60%), Positives = 267/360 (74%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            GIV+PRL P       EP    QALAS  W AAM+ EY+AL+ NGTW+LV LP  K AIG
Sbjct: 8    GIVKPRLQPTLLLTHIEPKNTKQALASDTWLAAMKQEYNALLNNGTWTLVSLPPNKTAIG 67

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KWVFR KEN DG++NKYKARLVAKGF+Q+ G DY+ETF+PV+KP+T+R+ILTLALTH W
Sbjct: 68   CKWVFRIKENSDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILTLALTHHW 127

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
            SI+Q+D+NNAFL+G L+EEVYM QP GFE  DK+LVCKLHKA+YGLKQAPRAW+D+L  T
Sbjct: 128  SIQQLDVNNAFLNGNLQEEVYMSQPPGFESSDKTLVCKLHKAIYGLKQAPRAWFDKLKTT 187

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            L    F  SKCDPSL VY                 ITG+++  +Q++I QL   F+LK  
Sbjct: 188  LFQLNFQISKCDPSLFVYSHDNNVIYILVYVDDIIITGNNSSTLQNIIAQLNSAFSLKDL 247

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
              LD+FLGIEV +  +GSL LTQSKY+R+LL R  M+ +  IS+P+ +  KLSR GS+ F
Sbjct: 248  GRLDFFLGIEVKSNTDGSLTLTQSKYIRDLLNRTNMENSNPISSPMVSGCKLSRTGSEKF 307

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKGDPHLVL 3
             D +LYRS+VGALQYATITRPEI ++VNK CQF+S PL+ HW+AVKRILRYLKG   L L
Sbjct: 308  LDVTLYRSVVGALQYATITRPEISFSVNKVCQFMSNPLEQHWSAVKRILRYLKGTMFLGL 367


>gb|KHN21230.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1429

 Score =  456 bits (1172), Expect = e-145
 Identities = 222/354 (62%), Positives = 273/354 (77%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            G ++P L P      TEP TV QAL+S HW  AMQ EY AL  N TWSLV LP  K+AIG
Sbjct: 899  GHLKPPLFPTINLTTTEPTTVQQALSSIHWTEAMQQEYQALQANKTWSLVPLPPHKRAIG 958

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KW+FR KENPDG++NKYKARLVAKGFNQ+ G DYS+T++PV+KPITVR +LT+ALT  W
Sbjct: 959  CKWIFRIKENPDGTINKYKARLVAKGFNQKYGQDYSDTYSPVVKPITVRTVLTIALTSKW 1018

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
             + Q+D+NNAFL+G L E+VYM+QP GF   + +LVCKLHKA+YGLKQAPRAWY+ LT T
Sbjct: 1019 PLIQLDVNNAFLNGQLHEDVYMQQPQGFIQGESTLVCKLHKAIYGLKQAPRAWYESLTNT 1078

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            L+SFGF  SKCDPSLL++    CC           ITGSS  A+  ++++L   F+LKQ 
Sbjct: 1079 LISFGFQQSKCDPSLLIFNKHGCCLLILIYVDDIIITGSSNTAINLIVNKLNATFSLKQL 1138

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
              L+YFLGIE    P+G+L L+Q+KY+R++L RAGM+  KGISTPLPA LKLS+ G+D F
Sbjct: 1139 GTLEYFLGIECKLTPSGALHLSQAKYIRDILHRAGMEDCKGISTPLPANLKLSKTGADPF 1198

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
            D+P+LYRSIVGALQYATITRPE+GY+V+K CQF +QPL SHW+AVKRILRYLKG
Sbjct: 1199 DNPTLYRSIVGALQYATITRPELGYSVSKVCQFFAQPLVSHWSAVKRILRYLKG 1252


>gb|KYP32233.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 537

 Score =  431 bits (1107), Expect = e-145
 Identities = 220/354 (62%), Positives = 262/354 (74%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            GIV+PRL P       EP T  QAL++P W AAMQ EY+AL+ NGTWSLV LP  + AIG
Sbjct: 8    GIVKPRLQPTLLLTHVEPKTTKQALSNPTWTAAMQTEYNALLHNGTWSLVPLPPHRTAIG 67

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KWVFR KENP+G++ KYKA LVAKGFNQ+ G DY ETF+PVIKP+TVR+ILTLALTH W
Sbjct: 68   CKWVFRVKENPNGTVQKYKACLVAKGFNQQFGFDYHETFSPVIKPVTVRLILTLALTHHW 127

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
             I+Q+D+NNAFL+G LEEEVYM QP GFE  DK LVCKLHKA+YGLKQAPRAW+++L  T
Sbjct: 128  PIQQLDVNNAFLNGTLEEEVYMTQPPGFEASDKCLVCKLHKAIYGLKQAPRAWFEKLKST 187

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            LL F F ASKCDPSL VY                 IT +++  + +L+ QL  VF+LK  
Sbjct: 188  LLQFHFQASKCDPSLFVYSHANNVIYILVYVDDIIITSNNSSILHTLVSQLHSVFSLKDL 247

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
              LDYFLGIEV T  +GSL+LTQSKY+R+LL R  M+  K IS+P+    KLS+ GS+ F
Sbjct: 248  GDLDYFLGIEVKTQSDGSLILTQSKYIRDLLNRTDMEALKPISSPMIPDSKLSKAGSEDF 307

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
             D SLYRS+VGALQYATITR EI ++VNK CQF+S PL  H +AVKRILRYLKG
Sbjct: 308  LDASLYRSVVGALQYATITRLEISFSVNKVCQFMSYPLAHHCSAVKRILRYLKG 361


>gb|PNX99662.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1046

 Score =  446 bits (1147), Expect = e-145
 Identities = 228/354 (64%), Positives = 263/354 (74%)
 Frame = -3

Query: 1064 LHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIGNKWVFR 885
            L P      +EP TV QALA P W AAM+ EY AL+KN TWSLV LPA ++AIG KWVFR
Sbjct: 524  LKPKVFLAHSEPGTVKQALADPQWLAAMKCEYSALMKNETWSLVPLPAHRRAIGCKWVFR 583

Query: 884  TKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSWSIKQID 705
             KENPDGS+NKYKARLVAKGF+Q  G DY+ETF+PV+KP+T+RIILTLA++  W I+QID
Sbjct: 584  IKENPDGSVNKYKARLVAKGFSQEHGFDYTETFSPVVKPVTIRIILTLAISFKWDIQQID 643

Query: 704  INNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKTLLSFGF 525
            +NNAFL+G L EEVYM QP GF   DK+LVCKLHKALYGLKQAPRAWY+RLT+ LL FGF
Sbjct: 644  VNNAFLNGILHEEVYMVQPPGFVSTDKTLVCKLHKALYGLKQAPRAWYERLTQALLHFGF 703

Query: 524  VASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQFEALDYF 345
             ASKCDPSL VY  K              +TGSS+  +  LI +L   FALK     DYF
Sbjct: 704  HASKCDPSLFVYNHKDVTLYVLVYVDDILLTGSSSALLHDLILKLNSQFALKHMGKPDYF 763

Query: 344  LGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYFDDPSLY 165
            LGIEV  + NGS+LLTQSKY+R+LL RA M  AKGISTP+ + LKLSR+G+D   DP  Y
Sbjct: 764  LGIEVKHLHNGSILLTQSKYIRDLLHRANMAEAKGISTPMVSSLKLSRFGTDTLPDPHEY 823

Query: 164  RSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKGDPHLVL 3
            RSIVGALQY T+TRPEI + VNK CQFL+ PL SHW AVKRILRYL    HL L
Sbjct: 824  RSIVGALQYVTLTRPEIAFCVNKMCQFLANPLLSHWQAVKRILRYLLSTCHLGL 877


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  446 bits (1147), Expect = e-145
 Identities = 221/354 (62%), Positives = 268/354 (75%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            GIV+PRL P       EP T  QAL++P W AAMQ EY+AL+ N TWSLV LP  + AIG
Sbjct: 544  GIVKPRLQPTLLLTQVEPKTTKQALSNPTWSAAMQTEYNALLHNNTWSLVPLPPHRTAIG 603

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KWVFR KENP+GS+ KYKARLVAKGFNQ+ G DY ETF+PVIKP+TVR+ILTLALTH W
Sbjct: 604  CKWVFRVKENPNGSVQKYKARLVAKGFNQQFGFDYHETFSPVIKPVTVRLILTLALTHRW 663

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
             I+Q+D+NNAFL+G LEEEVYM+QP GFE  DK+LVCKLHKA+YGLKQAPRAW+D+L  T
Sbjct: 664  PIQQLDVNNAFLNGTLEEEVYMQQPPGFEASDKNLVCKLHKAIYGLKQAPRAWFDKLKST 723

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            LL   F ASKCDPSL +Y                 ITG+++  + +L+ QL  +F+LK  
Sbjct: 724  LLQLNFYASKCDPSLFIYSQGNNVIYILVYVDDIIITGNNSSILHTLVSQLHSIFSLKDL 783

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
              LD+FLGIEV + P+GSL+LTQSKY+R+LL R  M+ +K IS+P+ +  KLS+ GS+ F
Sbjct: 784  GDLDFFLGIEVKSQPDGSLILTQSKYIRDLLNRTDMEGSKPISSPMISGSKLSKVGSEDF 843

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
             D SLYRS+VGALQYATITRPEI ++VNK CQF+S PL  HW AVKRILRYLKG
Sbjct: 844  LDASLYRSVVGALQYATITRPEISFSVNKVCQFMSHPLTHHWAAVKRILRYLKG 897


>gb|PNX95703.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 975

 Score =  443 bits (1139), Expect = e-144
 Identities = 221/360 (61%), Positives = 273/360 (75%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            GI  P+ HP      +EP +V QAL  P W  AMQ E+DAL +N TWSLV LPA +KAIG
Sbjct: 448  GIFLPK-HPTVLLTHSEPKSVKQALQDPKWLTAMQSEFDALQQNNTWSLVPLPANRKAIG 506

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KW+FR KENPDGS+NKYKARLVAKGF+Q +G D++ETF+ V+KP+T+R+ILTLA+++ W
Sbjct: 507  CKWIFRIKENPDGSINKYKARLVAKGFHQLQGFDFTETFSLVVKPLTIRLILTLAISYKW 566

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
            S++Q+D+NNAFL+G LEEEVYM+QP GFE+ + S+VCKL+KALYGLKQAPR W+D+LT T
Sbjct: 567  SLQQLDVNNAFLNGVLEEEVYMEQPQGFENSNPSMVCKLNKALYGLKQAPRQWFDKLTTT 626

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            L+ FGF  SKCDPSL +                  ITGSS++ V SL+ +L  VF+LKQ 
Sbjct: 627  LVRFGFQTSKCDPSLFILNKDNHIVYLLVYVDDIIITGSSSQLVTSLVHKLNSVFSLKQL 686

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
              LDYFLGIEV  +PN +LLLTQSKY+R+LL +  M  +  ISTP+ +  KLS+ GSD F
Sbjct: 687  GLLDYFLGIEVKHLPNSTLLLTQSKYIRDLLTKTNMLESNPISTPMMSTCKLSKVGSDKF 746

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKGDPHLVL 3
             DPSLYRS+VG+LQYATITRPEI YAVNK CQF+S PL SHWTAVKRILRYLK   H+ L
Sbjct: 747  HDPSLYRSVVGSLQYATITRPEIAYAVNKVCQFMSNPLDSHWTAVKRILRYLKETLHMGL 806


>gb|PNY02741.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1054

 Score =  445 bits (1144), Expect = e-144
 Identities = 220/346 (63%), Positives = 260/346 (75%)
 Frame = -3

Query: 1064 LHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIGNKWVFR 885
            L P      +EP  V QALA P W  AM+ EY AL+ N TWSLV LPA ++AIG KWVFR
Sbjct: 639  LKPKVFLAHSEPSNVKQALADPQWLTAMKAEYSALMNNQTWSLVPLPAHRRAIGCKWVFR 698

Query: 884  TKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSWSIKQID 705
             KENPDGS+NKYKARLVAKG++Q +G DY+ETF+PV+KP+T+RIILTLA++  W I+QID
Sbjct: 699  IKENPDGSVNKYKARLVAKGYSQEQGFDYNETFSPVVKPVTIRIILTLAISFKWDIQQID 758

Query: 704  INNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKTLLSFGF 525
            INNAFL+G L+EEVYM QP GF   D SLVC+LH+ALYGLKQAPRAWY+RLT+ L+ FGF
Sbjct: 759  INNAFLNGILQEEVYMTQPPGFISSDSSLVCRLHRALYGLKQAPRAWYERLTQALVRFGF 818

Query: 524  VASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQFEALDYF 345
              SKCDPSL VY  K              +TGSS+  +Q LI +L   FALK     DYF
Sbjct: 819  QPSKCDPSLFVYTHKGITLYVLVYVDDILLTGSSSSLLQDLISKLNSQFALKHMGRPDYF 878

Query: 344  LGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYFDDPSLY 165
            LGIEVH +PNG++LLTQSKY+R+LL RA M  AKGI+TP+ + LKLSR+GSD   DP  Y
Sbjct: 879  LGIEVHHLPNGNMLLTQSKYIRDLLHRANMAEAKGINTPMVSSLKLSRFGSDSLPDPHEY 938

Query: 164  RSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYL 27
            RSIVGALQY T+TRPEI + VNK CQFLS PL +HW AVKRILRYL
Sbjct: 939  RSIVGALQYVTLTRPEIAFCVNKVCQFLSNPLLTHWQAVKRILRYL 984


>gb|KYP67571.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 482

 Score =  426 bits (1096), Expect = e-144
 Identities = 213/354 (60%), Positives = 261/354 (73%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            GIV+PRL P      TEP T  QAL+   W AAMQ E++ L+ NGTWSLV LP  +  IG
Sbjct: 8    GIVKPRLQPTLLLTRTEPKTTRQALSDSTWFAAMQAEHNTLLHNGTWSLVPLPPNRTPIG 67

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KWVFR KEN D +++KYKARLVAKGF+Q+ G DY+ETF+PVIKP+TVR+ILTL LTH W
Sbjct: 68   CKWVFRVKENLDATVHKYKARLVAKGFHQQFGYDYNETFSPVIKPVTVRLILTLVLTHRW 127

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
             +KQ+D+NNAFL+G L EEVYM QP+GFE  DK+LVC+LHKA+YGLKQAPRAW+++L  T
Sbjct: 128  PLKQLDVNNAFLNGTLAEEVYMTQPTGFESSDKTLVCRLHKAIYGLKQAPRAWFEKLKST 187

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            LL F F ASKCDPSL VY                 ITG+++  +QSL+ +L   F+LK  
Sbjct: 188  LLQFHFQASKCDPSLFVYSVDNNIIYVLVYVDDIIITGNNSIVLQSLVSRLHSAFSLKDL 247

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
              LDYFLGIEV    +GSL+LTQSKY+R LL R  M+ +K IS+P+ +  KLS+  S+ F
Sbjct: 248  RDLDYFLGIEVKNQSDGSLILTQSKYIRNLLNRTDMEASKPISSPMVSGCKLSKIRSEKF 307

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
             D SLYRS+VGALQYATI RPEI ++VNK CQF+SQPL+ HW  VKRILRYLKG
Sbjct: 308  PDASLYRSVVGALQYATIIRPEISFSVNKVCQFMSQPLEQHWIVVKRILRYLKG 361


>gb|KYP46114.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  427 bits (1099), Expect = e-144
 Identities = 211/354 (59%), Positives = 266/354 (75%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            G   PR+HP      +EP TV QALA P+W +AMQ EY+AL+ N TW LV LP+ +KA+G
Sbjct: 8    GFHNPRIHPSLFLAHSEPKTVKQALADPNWFSAMQQEYNALMLNHTWDLVSLPSDRKAVG 67

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KWVFR KEN DGS++K KARLVAKGF+Q  G D+ ETF+PVIKPIT+RIILTLALT++W
Sbjct: 68   CKWVFRVKENADGSIDKLKARLVAKGFHQVHGFDFHETFSPVIKPITIRIILTLALTNNW 127

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
            ++ Q+D+NNAFL+G LEE +YM QP GFE  DKSLVCKL+KALYGLKQAPR W+++L  T
Sbjct: 128  NLFQLDVNNAFLNGTLEETIYMVQPPGFEAGDKSLVCKLNKALYGLKQAPRQWFNKLKLT 187

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            L  FGF ASKCDPSL  Y  +              ITGSS+  +Q + +QL  +F+LKQ 
Sbjct: 188  LTRFGFQASKCDPSLFQYQHQTHTIFILVYVDDIIITGSSSLLIQQITNQLDSIFSLKQL 247

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
             +LDYFLGIEV  +P+ SL+LTQSKY+R+LL +  +  A G  +P+ +  KLSR G+D+F
Sbjct: 248  GSLDYFLGIEVKHLPDKSLVLTQSKYIRDLLFKTNLAEAHGAPSPMFSNCKLSRSGNDFF 307

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
             DP+ +RS+VGALQYAT+TRPEI +AVNK CQF++ PL SHW AVKRIL+YLKG
Sbjct: 308  HDPTFFRSVVGALQYATLTRPEISFAVNKVCQFMATPLDSHWVAVKRILKYLKG 361


>gb|KYP67562.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 482

 Score =  425 bits (1092), Expect = e-144
 Identities = 212/354 (59%), Positives = 260/354 (73%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            GIV+PRL P      TEP T  QAL+   W AAMQ E++ L+ NGTWSLV LP  +  IG
Sbjct: 8    GIVKPRLQPTLLLTRTEPKTTRQALSDSTWFAAMQAEHNTLLHNGTWSLVPLPPNRTPIG 67

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KWVFR KEN D +++KYKARLVAKGF+Q+ G DY+ETF+PVIKP+T R+ILTL LTH W
Sbjct: 68   CKWVFRVKENLDATVHKYKARLVAKGFHQQFGYDYNETFSPVIKPVTARLILTLVLTHRW 127

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
             +KQ+D+NNAFL+G L EEVYM QP+GFE  DK+LVC+LHKA+YGLKQAPRAW+++L  T
Sbjct: 128  PLKQLDVNNAFLNGTLAEEVYMTQPTGFESSDKTLVCRLHKAIYGLKQAPRAWFEKLKST 187

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            LL F F ASKCDPSL VY                 ITG+++  +QSL+ +L   F+LK  
Sbjct: 188  LLQFHFQASKCDPSLFVYSVDNNIIYVLVYVDDIIITGNNSIVLQSLVSRLHSAFSLKDL 247

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
              LDYFLGIEV    +GSL+LTQSKY+R LL R  M+ +K IS+P+ +  KLS+  S+ F
Sbjct: 248  RDLDYFLGIEVKNQSDGSLILTQSKYIRNLLNRTDMEASKPISSPMVSGCKLSKIRSEKF 307

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
             D SLYRS+VGALQYATI RPEI ++VNK CQF+SQPL+ HW  VKRILRYLKG
Sbjct: 308  PDASLYRSVVGALQYATIIRPEISFSVNKVCQFMSQPLEQHWIVVKRILRYLKG 361


>gb|PNX92906.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1196

 Score =  444 bits (1142), Expect = e-143
 Identities = 216/348 (62%), Positives = 263/348 (75%)
 Frame = -3

Query: 1064 LHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIGNKWVFR 885
            L P       EP +V  AL  P W  AMQ EY AL+ N TWSLV LP  KKAIG KW+FR
Sbjct: 673  LKPKVLTASIEPTSVRAALNDPQWLKAMQSEYKALMDNNTWSLVSLPPHKKAIGCKWIFR 732

Query: 884  TKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSWSIKQID 705
             KENPDG++NKYKARLVAKGF Q  G D+ ETF+PVIKP T+RIILTLA+T+ W+++QID
Sbjct: 733  VKENPDGTVNKYKARLVAKGFLQTPGFDFKETFSPVIKPTTIRIILTLAVTYKWAVQQID 792

Query: 704  INNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKTLLSFGF 525
            +NNAFL+G L+EEVYM QPSGFE  DKSLVCKLHK+LYGLKQAPRAWY+RLT+TLL  GF
Sbjct: 793  VNNAFLNGLLQEEVYMSQPSGFEVADKSLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGF 852

Query: 524  VASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQFEALDYF 345
            VASKCDPSLL++  +  C           ITGS+   +Q LI +L   F+LKQ   +DYF
Sbjct: 853  VASKCDPSLLIHHQQGACTYVLIYVDDILITGSAPHLIQDLIHKLNIQFSLKQLGEVDYF 912

Query: 344  LGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYFDDPSLY 165
            LGIEVH +P+G LLL QSKY+++LL R  M+  K I +P+ +  +LS++G+D   DPSLY
Sbjct: 913  LGIEVHHMPSGGLLLNQSKYIKDLLSRTKMENCKAIGSPMVSSCRLSKFGTDSMSDPSLY 972

Query: 164  RSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
            RS VGALQYAT+TRP+I Y+VNK CQF++ PL++HW AVKRILRYLKG
Sbjct: 973  RSTVGALQYATLTRPDISYSVNKVCQFMANPLETHWKAVKRILRYLKG 1020


>gb|KYP48058.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 539

 Score =  424 bits (1090), Expect = e-142
 Identities = 211/354 (59%), Positives = 262/354 (74%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            GI +P+ +P      +EP  V QAL  P W  AM+ EY AL+KN TW+LV LP  + AIG
Sbjct: 8    GIHKPK-YPSVLLAQSEPKNVKQALKDPKWLEAMKQEYSALLKNNTWTLVQLPPDRNAIG 66

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KWVFR KEN DGS+N+YKARLVAKGF Q+ G D++ETF+P+IKP+T+R+ILTLA+++ W
Sbjct: 67   CKWVFRIKENSDGSVNRYKARLVAKGFLQQPGFDFNETFSPIIKPVTIRLILTLAISNHW 126

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
             I Q+D+NNAFL+G L E VYM+QP GFE  D +LVCKL+KALYGLKQAPR W++RL  T
Sbjct: 127  DIHQLDVNNAFLNGSLNETVYMQQPPGFEVPDSTLVCKLNKALYGLKQAPRQWFERLQYT 186

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            LL FGF ASKCDPSL  Y  +              ITG+S +  Q LIDQL  +F+LKQ 
Sbjct: 187  LLQFGFKASKCDPSLFTYHMQSNIVYLLVYVDDIIITGNSFQFTQQLIDQLNSIFSLKQL 246

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
              LDYFLGIEV  + NGS+LLTQSKY+R+LL+R  M  A  IS+P+ +  KLS++GSD  
Sbjct: 247  GKLDYFLGIEVRHLQNGSVLLTQSKYIRDLLQRTNMLEANAISSPMVSSCKLSKHGSDTL 306

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
             D + YRS+VGALQYATITRPE+ +AVNK CQF++ PL+SHW AVKRILRYLKG
Sbjct: 307  ADSTFYRSVVGALQYATITRPELSFAVNKVCQFMAHPLESHWNAVKRILRYLKG 360


>gb|PNX93512.1| histone deacetylase, partial [Trifolium pratense]
          Length = 1418

 Score =  447 bits (1151), Expect = e-142
 Identities = 221/348 (63%), Positives = 265/348 (76%)
 Frame = -3

Query: 1064 LHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIGNKWVFR 885
            L P       EP T+  ALASP W  AM+ EY AL+ N TWSLV LP  KKAIG KW+FR
Sbjct: 908  LKPKTFTASIEPTTIKSALASPQWLQAMKSEYKALMDNNTWSLVPLPPHKKAIGCKWIFR 967

Query: 884  TKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSWSIKQID 705
             KENPDGS+NKYKARLVAKGF Q  G D++ETF+PVIKP+TVRIILTLA+T+ WS++QID
Sbjct: 968  VKENPDGSVNKYKARLVAKGFLQTPGFDFTETFSPVIKPVTVRIILTLAVTYRWSVQQID 1027

Query: 704  INNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKTLLSFGF 525
            INNAFL+G L+EEVYM QP+GFE  DK+LVCKLHK+LYGLKQAPRAWY+RLT+TLL  GF
Sbjct: 1028 INNAFLNGLLQEEVYMSQPAGFEASDKTLVCKLHKSLYGLKQAPRAWYERLTQTLLQMGF 1087

Query: 524  VASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQFEALDYF 345
            V SKCDPSLLV+     C           ITGS ++ V+ LI +L   FALKQ   +DYF
Sbjct: 1088 VKSKCDPSLLVHHQHGACTYVLVYVDDILITGSDSQLVKDLIHKLNIKFALKQLGEVDYF 1147

Query: 344  LGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYFDDPSLY 165
            LGIEVH  P+G LLL QSKYV++LL +  M+  K I +P+ +  KLS++G+D   DP+LY
Sbjct: 1148 LGIEVHHKPSGGLLLHQSKYVKDLLVKTNMENCKPIGSPMVSSCKLSKFGTDVMTDPTLY 1207

Query: 164  RSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
            RS VGALQYAT+TRP+I Y+VNK CQF++ PL+SHW AVKRILRYLKG
Sbjct: 1208 RSTVGALQYATLTRPDISYSVNKVCQFMAHPLESHWKAVKRILRYLKG 1255


>gb|PNX93473.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1181

 Score =  442 bits (1137), Expect = e-142
 Identities = 221/360 (61%), Positives = 269/360 (74%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            GIV+P+ +P      +EP TV QAL  P W  AM+ E+DAL +N TW+LV LP  +KAIG
Sbjct: 655  GIVRPKQNPKLLLTSSEPKTVKQALKDPQWYTAMKEEFDALQRNQTWTLVKLPPNRKAIG 714

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KWVFRTKENPDGS+NK KARLVAKGF+Q  G D++ETF+PVIKPIT+R+IL LA+++ W
Sbjct: 715  CKWVFRTKENPDGSINKLKARLVAKGFHQLHGFDFNETFSPVIKPITIRLILALAISYKW 774

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
             +KQ+DINNAFL+G L+EEVYM QP GFE  D SLVCKL KALYGLKQAPR W+D+L  T
Sbjct: 775  PLKQLDINNAFLNGSLDEEVYMVQPQGFETTDSSLVCKLQKALYGLKQAPRQWFDKLATT 834

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            L+ FGF ASKCDPSL +Y                 ITGSS   VQ L+ +L  VF+LKQ 
Sbjct: 835  LIQFGFKASKCDPSLFIYSHNRQVVYLLVYVDDIIITGSSLTLVQHLVTKLDSVFSLKQL 894

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
              LDYFLGIEV  + +GSLLLTQSKY+++LL +  M  +  I+TP+ +  KLS+ GSD  
Sbjct: 895  GNLDYFLGIEVKHLTDGSLLLTQSKYIKDLLVKTNMIDSNPIATPMMSSCKLSKVGSDNV 954

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKGDPHLVL 3
             DP+LYRS+VG+LQYATITRPEI +AVNK CQF+S PL+SHWTAVKRILRYLKG  H+ L
Sbjct: 955  ADPTLYRSVVGSLQYATITRPEISFAVNKVCQFMSAPLESHWTAVKRILRYLKGTSHIGL 1014


>gb|KYP51570.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 481

 Score =  421 bits (1081), Expect = e-142
 Identities = 211/354 (59%), Positives = 257/354 (72%)
 Frame = -3

Query: 1082 GIVQPRLHPXXXXXXTEPYTVSQALASPHWKAAMQVEYDALIKNGTWSLVHLPAGKKAIG 903
            GIV+PRL P       EP T+ QAL++  W A MQ EY+AL+ N TWSLVHLP  + AIG
Sbjct: 8    GIVKPRLQPTLLLTHVEPKTIKQALSNSTWSAVMQTEYNALLSNDTWSLVHLPPHRTAIG 67

Query: 902  NKWVFRTKENPDGSLNKYKARLVAKGFNQREGCDYSETFAPVIKPITVRIILTLALTHSW 723
             KWVF  KENPDG++ KYKARLV KGFNQ+ G DY+ETFAPVIK +T+R+ILTLALTH W
Sbjct: 68   CKWVFCIKENPDGTVQKYKARLVTKGFNQQFGFDYNETFAPVIKLVTIRLILTLALTHHW 127

Query: 722  SIKQIDINNAFLHGFLEEEVYMKQPSGFEHHDKSLVCKLHKALYGLKQAPRAWYDRLTKT 543
             ++Q+DINNAFL+G L+EEVYM QP GFE  DK+LVCKLHKA+YGLKQAPRAW+++L  T
Sbjct: 128  PLQQLDINNAFLNGTLDEEVYMTQPPGFEASDKNLVCKLHKAIYGLKQAPRAWFEKLKST 187

Query: 542  LLSFGFVASKCDPSLLVYCTKVCCXXXXXXXXXXXITGSSTKAVQSLIDQLTHVFALKQF 363
            LL F F ASKCDPSL VY                 IT + +  + +L+ QL   F+LK  
Sbjct: 188  LLQFNFQASKCDPSLFVYSHANSVIYILVYVDDIIITSNDSTLLHTLVSQLHSTFSLKDL 247

Query: 362  EALDYFLGIEVHTVPNGSLLLTQSKYVRELLERAGMDTAKGISTPLPAKLKLSRYGSDYF 183
              LDYFLGIEV T  +GSL+LTQSKY+R+LL    M+ +K  S+ + +  KLS+ G++ F
Sbjct: 248  GDLDYFLGIEVKTQSDGSLILTQSKYIRDLLNHTDMEASKPFSSLMVSGCKLSKVGTEDF 307

Query: 182  DDPSLYRSIVGALQYATITRPEIGYAVNKACQFLSQPLQSHWTAVKRILRYLKG 21
             D SLYRSIVGALQYATITRPEI ++VNK  QF+S PL  HW+ VK ILRYLKG
Sbjct: 308  LDVSLYRSIVGALQYATITRPEISFSVNKVYQFMSHPLAHHWSTVKHILRYLKG 361