BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00007692
         (579 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subt...   246   7e-72
gb|PNX72611.1| peptide transporter PTR2 [Trifolium pratense]          242   8e-72
gb|PNX93131.1| retrovirus-related Pol polyprotein from transposo...   241   5e-71
gb|KYP51629.1| Retrovirus-related Pol polyprotein from transposo...   221   3e-70
gb|AJY78067.1| putative polyprotein [Glycine max]                     234   9e-69
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo...   236   1e-68
gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposo...   234   4e-68
gb|PNY12226.1| retrovirus-related Pol polyprotein from transposo...   229   6e-66
dbj|GAU15708.1| hypothetical protein TSUD_307180 [Trifolium subt...   228   8e-66
dbj|GAU47513.1| hypothetical protein TSUD_138850 [Trifolium subt...   224   3e-64
gb|KYP68633.1| Retrovirus-related Pol polyprotein from transposo...   223   6e-64
dbj|GAU31769.1| hypothetical protein TSUD_22150 [Trifolium subte...   223   8e-64
gb|PNX93071.1| retrovirus-related Pol polyprotein from transposo...   217   6e-62
gb|KYP51126.1| Retrovirus-related Pol polyprotein from transposo...   200   6e-61
gb|KYP70579.1| Retrovirus-related Pol polyprotein from transposo...   198   5e-60
gb|PNX95813.1| retrovirus-related Pol polyprotein from transposo...   211   7e-60
dbj|GAU31820.1| hypothetical protein TSUD_58210 [Trifolium subte...   211   1e-59
gb|KYP44664.1| Retrovirus-related Pol polyprotein from transposo...   197   1e-59
gb|KYP62795.1| Retrovirus-related Pol polyprotein from transposo...   196   6e-59
gb|KYP47160.1| Retrovirus-related Pol polyprotein from transposo...   194   1e-58

>dbj|GAU46782.1| hypothetical protein TSUD_351810 [Trifolium subterraneum]
          Length = 1512

 Score =  246 bits (627), Expect = 7e-72
 Identities = 122/196 (62%), Positives = 145/196 (73%), Gaps = 3/196 (1%)
 Frame = +1

Query: 1    EMIGSGVMHEGLIYLIL--EDCRANS-ISAGDGGTETLPSSALWHFRLGHLSSNRIKLML 171
            +MIGSG + EGL YL    +   ANS IS        +P  ALWHFRLGHLS  R+ LM 
Sbjct: 495  KMIGSGELIEGLYYLTNKPQPVSANSSISINPSSNIHIPKQALWHFRLGHLSHARLLLMQ 554

Query: 172  SDFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYF 351
            S FPFV IDE ++CDICH +RHK+L Y LS ++AS C E+IHFDIWGP S  SIHGHRYF
Sbjct: 555  SSFPFVTIDEHAVCDICHLARHKKLTYKLSVNKASHCGELIHFDIWGPTSIHSIHGHRYF 614

Query: 352  LTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAK 531
            LT++DD SR+TW+I+LKSK+EVS+ V   I M+EKQ N  V+ IRTDNGPEF + +FYA 
Sbjct: 615  LTAIDDFSRFTWVILLKSKAEVSSLVIQFITMIEKQFNTIVRTIRTDNGPEFLIPEFYAS 674

Query: 532  KGIIHQTSCVETPQQN 579
            KGI HQTSCVETPQQN
Sbjct: 675  KGINHQTSCVETPQQN 690


>gb|PNX72611.1| peptide transporter PTR2 [Trifolium pratense]
          Length = 845

 Score =  242 bits (617), Expect = 8e-72
 Identities = 119/196 (60%), Positives = 145/196 (73%), Gaps = 3/196 (1%)
 Frame = +1

Query: 1   EMIGSGVMHEGLIYLIL--EDCRANS-ISAGDGGTETLPSSALWHFRLGHLSSNRIKLML 171
           +MIGSG + EGL YL    +   AN+ I         +P+ ALWHFRLGHLS  R+ LM 
Sbjct: 401 KMIGSGELIEGLYYLTNRPQPVAANTHIVPHHTSVFYIPTQALWHFRLGHLSHARLLLMK 460

Query: 172 SDFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYF 351
           S FPFVN+D  ++CDICH +RHK+L Y LS ++AS C E+IHFDIWGP S  SIHGHRYF
Sbjct: 461 SHFPFVNLDNKAVCDICHLARHKKLTYKLSVNKASTCGELIHFDIWGPTSIQSIHGHRYF 520

Query: 352 LTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAK 531
           LT++DD +R+TW+I+ KSKSEVSN + + + M+EKQ N TVK IRTDNGPEF +  FYA 
Sbjct: 521 LTAVDDFTRFTWVILFKSKSEVSNLLIDFVTMIEKQFNTTVKTIRTDNGPEFLIPKFYAS 580

Query: 532 KGIIHQTSCVETPQQN 579
           KGI HQTSCVETPQQN
Sbjct: 581 KGINHQTSCVETPQQN 596


>gb|PNX93131.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 982

 Score =  241 bits (616), Expect = 5e-71
 Identities = 110/192 (57%), Positives = 144/192 (75%)
 Frame = +1

Query: 4   MIGSGVMHEGLIYLILEDCRANSISAGDGGTETLPSSALWHFRLGHLSSNRIKLMLSDFP 183
           MIGS   +EGL +L L D  A+  S       T+P SA+WHFRLGH S +R+  + + FP
Sbjct: 1   MIGSADQYEGLYHLNLADKIAHVASIDGSTYTTIPKSAIWHFRLGHPSHHRLVSLKAKFP 60

Query: 184 FVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYFLTSL 363
           +V +D   ICDICH +RHK+LPY+ S ++A+  Y++IHFDIWGPIS  SIHGH YFLT++
Sbjct: 61  YVTVDPTGICDICHLARHKKLPYSNSFNKATHAYDVIHFDIWGPISIKSIHGHSYFLTAV 120

Query: 364 DDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAKKGII 543
           DD+SR+TWII++KSK+E  NHV NLI M+  Q N  VKI+R+DNGPEFF+ +FY+  GI+
Sbjct: 121 DDYSRFTWIILMKSKAETRNHVINLIKMIHTQYNHQVKIVRSDNGPEFFMTEFYSSHGIL 180

Query: 544 HQTSCVETPQQN 579
           HQTSCVE+PQQN
Sbjct: 181 HQTSCVESPQQN 192


>gb|KYP51629.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 191

 Score =  221 bits (562), Expect = 3e-70
 Identities = 100/191 (52%), Positives = 138/191 (72%), Gaps = 2/191 (1%)
 Frame = +1

Query: 4   MIGSGVMHEGLIYLIL--EDCRANSISAGDGGTETLPSSALWHFRLGHLSSNRIKLMLSD 177
           MIG   + +GL +L++  E C     S+ +  T    +  LWH RLGHLS +R+ L+   
Sbjct: 1   MIGLASLKQGLYHLVINKEGCLPTFSSSANSLTANTNNKNLWHLRLGHLSGSRLNLLHEQ 60

Query: 178 FPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYFLT 357
           FPF++      CDICH S+ K+ PY++S+SRA+K +++IH DIWGP S  SI+GH+YFLT
Sbjct: 61  FPFISKHINETCDICHLSKQKKFPYSISTSRATKMFDLIHMDIWGPFSKPSIYGHKYFLT 120

Query: 358 SLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAKKG 537
            LDD SRYTWI++LKSK+EV +HV+N I ++E Q + T+KI+R+DNGPEF L +F+A KG
Sbjct: 121 ILDDFSRYTWIVLLKSKAEVQSHVQNFIALIENQFHTTIKILRSDNGPEFSLKNFFASKG 180

Query: 538 IIHQTSCVETP 570
           IIHQTSCV+TP
Sbjct: 181 IIHQTSCVDTP 191


>gb|AJY78067.1| putative polyprotein [Glycine max]
          Length = 886

 Score =  234 bits (597), Expect = 9e-69
 Identities = 106/199 (53%), Positives = 145/199 (72%), Gaps = 6/199 (3%)
 Frame = +1

Query: 1    EMIGSGVMHEGLIYLIL--EDCRANSISAGD----GGTETLPSSALWHFRLGHLSSNRIK 162
            +MIG G   +GL YL    ++C +++ +            +P +A+WHFRLGHLSS+RI 
Sbjct: 486  KMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHFRLGHLSSSRIA 545

Query: 163  LMLSDFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGH 342
            L+ S FPF+  D  S+CDICHF++H++LP+  S  +A KC+++IHFDIWGPIS  S+H H
Sbjct: 546  LLHSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIWGPISIKSVHNH 605

Query: 343  RYFLTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDF 522
             YFLT++DDHSRYTWI ++K+KSE   HV+N I+ ++ Q N +VK IRTDNGPEF + DF
Sbjct: 606  AYFLTAVDDHSRYTWITLMKNKSEARLHVQNFIHFIKTQYNHSVKSIRTDNGPEFLMPDF 665

Query: 523  YAKKGIIHQTSCVETPQQN 579
            YA KGI+HQT CV++PQQN
Sbjct: 666  YASKGILHQTLCVDSPQQN 684


>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1346

 Score =  236 bits (603), Expect = 1e-68
 Identities = 107/199 (53%), Positives = 146/199 (73%), Gaps = 6/199 (3%)
 Frame = +1

Query: 1   EMIGSGVMHEGLIYLIL--EDCRANSISAGD----GGTETLPSSALWHFRLGHLSSNRIK 162
           +MIG G   +GL YL    ++C +++ +            +P +A+WHFRLGHLSS+RI 
Sbjct: 390 KMIGLGESRDGLYYLTQTNKECASSNYNISSIFSSANNVHIPENAIWHFRLGHLSSSRIA 449

Query: 163 LMLSDFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGH 342
           L+ S FPF+  D  S+CDICHF++H++LP+  S  +A KC+++IHFDIWGPIS  S+H H
Sbjct: 450 LLHSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFDIWGPISIKSVHNH 509

Query: 343 RYFLTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDF 522
            YFLT++DDHSRYTWI ++K+KSE   HV+N I+ ++ Q N +VK IRTDNGPEF + DF
Sbjct: 510 AYFLTAVDDHSRYTWITLMKNKSEARLHVQNFIHFIKTQYNHSVKSIRTDNGPEFLMPDF 569

Query: 523 YAKKGIIHQTSCVETPQQN 579
           YA KGI+HQTSCV++PQQN
Sbjct: 570 YASKGILHQTSCVDSPQQN 588


>gb|KYP36109.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1115

 Score =  234 bits (598), Expect = 4e-68
 Identities = 109/193 (56%), Positives = 140/193 (72%)
 Frame = +1

Query: 1   EMIGSGVMHEGLIYLILEDCRANSISAGDGGTETLPSSALWHFRLGHLSSNRIKLMLSDF 180
           +MIGS  + EGL +L +   R +S +  +     + +S LWHFRLGHLSSNR+ ++   F
Sbjct: 158 KMIGSANLKEGLFHLDIGKERRSSTN--NATATPINNSNLWHFRLGHLSSNRLNVLNQQF 215

Query: 181 PFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYFLTS 360
           PF++     +CD+CHF++ K+L Y+ SSSR SK +++IH DIWGP S  SIHGH+YFLT 
Sbjct: 216 PFISKHSNEVCDVCHFAKQKKLSYSPSSSRVSKIFDLIHMDIWGPFSKASIHGHKYFLTI 275

Query: 361 LDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAKKGI 540
           LDD SRYTW+++LKSKSEV  HV N IN++E Q    VK IR+DNGPEFFL DF+  KGI
Sbjct: 276 LDDFSRYTWVVLLKSKSEVKTHVHNFINLVENQYETKVKCIRSDNGPEFFLRDFFNSKGI 335

Query: 541 IHQTSCVETPQQN 579
           IHQTSCV TPQQN
Sbjct: 336 IHQTSCVYTPQQN 348


>gb|PNY12226.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1464

 Score =  229 bits (583), Expect = 6e-66
 Identities = 100/194 (51%), Positives = 149/194 (76%), Gaps = 1/194 (0%)
 Frame = +1

Query: 1    EMIGSGVMHEGLIYLILEDCRANSISAGDGGTE-TLPSSALWHFRLGHLSSNRIKLMLSD 177
            +MIGSG    GL YL   +   +S+S+G   T  ++P SALWHFR GH S+ R+++M   
Sbjct: 483  KMIGSGKKLNGLYYLEGTNASVHSLSSGTVCTFFSIPQSALWHFRFGHASNTRLEIMHKL 542

Query: 178  FPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYFLT 357
            +P ++I++  +CD+CH ++ K+L Y+LS+S+ +KC++++H DIWGP ST ++HGH+YFLT
Sbjct: 543  YPSISINKDCVCDVCHLAKQKKLSYSLSTSQTTKCFDLLHMDIWGPYSTATLHGHKYFLT 602

Query: 358  SLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAKKG 537
             +DD SR+TW+I+LK K+EV++HV++ I ++E Q ++TVKI+R+DNGPEF +  FYA KG
Sbjct: 603  IVDDFSRFTWVILLKGKNEVASHVQHFIQLVENQFDSTVKIVRSDNGPEFSIPSFYASKG 662

Query: 538  IIHQTSCVETPQQN 579
            I+HQTSCV TPQQN
Sbjct: 663  IVHQTSCVYTPQQN 676


>dbj|GAU15708.1| hypothetical protein TSUD_307180 [Trifolium subterraneum]
          Length = 1433

 Score =  228 bits (582), Expect = 8e-66
 Identities = 100/196 (51%), Positives = 149/196 (76%), Gaps = 4/196 (2%)
 Frame = +1

Query: 4    MIGSGVMHEGLIYLILEDCRANSISAGDGGTE----TLPSSALWHFRLGHLSSNRIKLML 171
            MIGSG +  GL YL   +   +S+     GT     ++P SALWHFR GH S++R+++M 
Sbjct: 458  MIGSGKLLNGLYYLEGTNASTHSLVKPVTGTVCTVFSIPQSALWHFRFGHASNSRLEIMH 517

Query: 172  SDFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYF 351
              +P ++I++  +CD+CH ++ K+L Y+LS+S+++KC+E++H DIWGP ST ++HGH+YF
Sbjct: 518  KSYPSISINKDCVCDVCHLAKQKKLSYSLSTSKSTKCFELLHMDIWGPYSTATLHGHKYF 577

Query: 352  LTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAK 531
            LT +DD SR+TW+I+LK K+EV++HV++ I+++E Q  +TVKI+R+DNGPEF L+ FYA 
Sbjct: 578  LTIVDDFSRFTWVILLKGKNEVASHVQHFIHLVENQFESTVKIVRSDNGPEFSLSSFYAS 637

Query: 532  KGIIHQTSCVETPQQN 579
            K I+HQTSCV TPQQN
Sbjct: 638  KRIVHQTSCVYTPQQN 653


>dbj|GAU47513.1| hypothetical protein TSUD_138850 [Trifolium subterraneum]
          Length = 1469

 Score =  224 bits (570), Expect = 3e-64
 Identities = 105/195 (53%), Positives = 142/195 (72%), Gaps = 3/195 (1%)
 Frame = +1

Query: 4    MIGSGVMHEGLIYLIL--EDCRANSISAGDGGTET-LPSSALWHFRLGHLSSNRIKLMLS 174
            MIG   + EGL YL L  ++  A+SI   DG   T +P  ALWHFRLGH S+ ++ L+ S
Sbjct: 462  MIGFADLIEGLYYLTLTSKEVHAHSI---DGTQHTNIPDQALWHFRLGHTSNTKMSLLQS 518

Query: 175  DFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYFL 354
             FPF+ +D   +CDICH ++HK+L Y +S ++A+  YE+IHFDIWGPI++ SIH H YFL
Sbjct: 519  VFPFITVDNKGVCDICHLAKHKKLYYKVSMNKATVPYELIHFDIWGPIASKSIHNHAYFL 578

Query: 355  TSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAKK 534
            T++DD+SR+TW+ ++K KSE   HV N I ++E Q+N+ VKI+RT NG EF +  FYA K
Sbjct: 579  TAVDDYSRFTWVTLMKHKSEARQHVINFIKLIETQHNSKVKIVRTYNGVEFLMPQFYASK 638

Query: 535  GIIHQTSCVETPQQN 579
            GI+HQTSCVETP+QN
Sbjct: 639  GIVHQTSCVETPEQN 653


>gb|KYP68633.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1108

 Score =  223 bits (567), Expect = 6e-64
 Identities = 95/162 (58%), Positives = 132/162 (81%)
 Frame = +1

Query: 94  TETLPSSALWHFRLGHLSSNRIKLMLSDFPFVNIDEGSICDICHFSRHKRLPYALSSSRA 273
           TE++P S+LWHFRLGHLS  R++ M  + P + I++ ++CDICH ++ K+LPY +S +RA
Sbjct: 485 TESIPESSLWHFRLGHLSHERLETMSRENPIIFINKDAVCDICHLAKKKKLPYLMSKNRA 544

Query: 274 SKCYEMIHFDIWGPISTTSIHGHRYFLTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLE 453
           S+  E++HF+IWGP    SIHGH+YFLT+LDD +R+ W+I++KSKSEVS H++NL++MLE
Sbjct: 545 SEICELLHFNIWGPYQINSIHGHKYFLTALDDCNRFLWVILMKSKSEVSTHLQNLVHMLE 604

Query: 454 KQNNATVKIIRTDNGPEFFLNDFYAKKGIIHQTSCVETPQQN 579
           +Q    +KIIRTDNGPEF L +FYAK+GI+HQTSCVE P+QN
Sbjct: 605 RQFEKKIKIIRTDNGPEFTLTEFYAKEGILHQTSCVECPEQN 646


>dbj|GAU31769.1| hypothetical protein TSUD_22150 [Trifolium subterraneum]
          Length = 1372

 Score =  223 bits (567), Expect = 8e-64
 Identities = 106/195 (54%), Positives = 141/195 (72%), Gaps = 3/195 (1%)
 Frame = +1

Query: 4   MIGSGVMHEGLIYLIL--EDCRANSISAGDGGTET-LPSSALWHFRLGHLSSNRIKLMLS 174
           MIGS  + EGL YL L  E+  A++I   DG   T +P  ALW FRLGH S+ ++ L+ S
Sbjct: 421 MIGSADLIEGLYYLTLTSEEVHAHNI---DGTQHTNIPDQALWLFRLGHTSNTKMSLLQS 477

Query: 175 DFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYFL 354
            FPF+ +D   +CDICH ++HK+L Y +S ++A   YE+IHFDIWGPI++ SIH H YFL
Sbjct: 478 VFPFIAVDNKGVCDICHLAKHKKLYYKVSMNKAYVPYELIHFDIWGPIASKSIHNHAYFL 537

Query: 355 TSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAKK 534
           T +DD+SR+TW+ ++K K+E   HV N I ++E Q+N+ VKI+RTDNG EF +  FYA K
Sbjct: 538 TVVDDYSRFTWVTLMKHKTEARQHVINFIKLIETQHNSKVKIVRTDNGVEFLITQFYASK 597

Query: 535 GIIHQTSCVETPQQN 579
           GIIHQTSCVETP+QN
Sbjct: 598 GIIHQTSCVETPEQN 612


>gb|PNX93071.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1455

 Score =  217 bits (553), Expect = 6e-62
 Identities = 97/197 (49%), Positives = 145/197 (73%), Gaps = 4/197 (2%)
 Frame = +1

Query: 1    EMIGSGVMHEGLIYL----ILEDCRANSISAGDGGTETLPSSALWHFRLGHLSSNRIKLM 168
            +MIGSG +  GL YL          +NSI      + ++P SALWHFR GH S++R+++M
Sbjct: 497  KMIGSGRLINGLYYLEGIPSSVSLHSNSIPGIVCTSVSIPQSALWHFRFGHASNSRLQIM 556

Query: 169  LSDFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRY 348
               +P + +++  +CD+CH ++ K+LPY LS+S++S+C E++H DIWGP +T ++HGH+Y
Sbjct: 557  QQMYPSIVLNKECVCDVCHLAKQKQLPYQLSTSKSSRCLELLHMDIWGPYTTATVHGHKY 616

Query: 349  FLTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYA 528
            FLT +DD+SR+TW+I+LK K EV++ V++ I ++E Q ++ VKI+R+DNGPEF L  FYA
Sbjct: 617  FLTIVDDYSRFTWVILLKGKYEVTSQVQHFITLVETQFDSKVKILRSDNGPEFSLASFYA 676

Query: 529  KKGIIHQTSCVETPQQN 579
             KGIIHQTSC+ TP+QN
Sbjct: 677  SKGIIHQTSCIYTPKQN 693


>gb|KYP51126.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 289

 Score =  200 bits (509), Expect = 6e-61
 Identities = 93/194 (47%), Positives = 134/194 (69%), Gaps = 1/194 (0%)
 Frame = +1

Query: 1   EMIGSGVMHEGLIYLILEDCRANSISAGDGGTETLPSSALWHFRLGHLSSNRIKLMLSDF 180
           +MIGS     GL ++ +   +  + +  +  + + P++ LWHFRLGH+S +++  M+S +
Sbjct: 97  KMIGSAEALNGLYFMQVSKHQTQA-NLAEATSSSFPNTVLWHFRLGHISFSKMNQMISLY 155

Query: 181 PFV-NIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYFLT 357
           P++ N ++  ICDICHF+R +RLPY+ S   ASK ++++H D+WG   T SI  H+YFLT
Sbjct: 156 PYLQNSNKRHICDICHFARQRRLPYSDSLHNASKPFDLLHLDVWGTFKTKSIQNHKYFLT 215

Query: 358 SLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAKKG 537
            LDD+SRY W+I LK KSE   H+++   M+E Q N T+K IRT+NG +FFL  FY  KG
Sbjct: 216 ILDDYSRYLWVIFLKHKSETEVHLRSFTQMVETQFNTTIKTIRTNNGSKFFLASFYRDKG 275

Query: 538 IIHQTSCVETPQQN 579
           IIHQT+CVETPQQN
Sbjct: 276 IIHQTTCVETPQQN 289


>gb|KYP70579.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 288

 Score =  198 bits (503), Expect = 5e-60
 Identities = 88/198 (44%), Positives = 140/198 (70%), Gaps = 6/198 (3%)
 Frame = +1

Query: 4   MIGSGVMHEGLIYLILEDCR-----ANSISAGDGGTETLPSSALWHFRLGHLSSNRIKLM 168
           MIG     +GL YLI + C+      + I+       T   +ALWHFRLGH+S +R+ ++
Sbjct: 1   MIGFAEEVDGLYYLI-KTCQKPTTNTSQINTSSTHNSTYSPNALWHFRLGHISESRLNML 59

Query: 169 LSDFPFVN-IDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHR 345
              + F+N  +   +CD+CHF++ ++LP+++S+S+ S+ +E++H D+WGP S  +++  R
Sbjct: 60  SELYSFINNCNHKHVCDVCHFAKQRKLPFSVSNSKTSRPFELLHLDLWGPYSIQTVNHQR 119

Query: 346 YFLTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFY 525
           YFLT +DD+SRYTW+I+LK+KS+    +++   ++++Q ++ +K IRTDNGPEFFL+ FY
Sbjct: 120 YFLTIVDDYSRYTWVILLKNKSQTEQSLRHFSKLVDRQFHSKIKTIRTDNGPEFFLHSFY 179

Query: 526 AKKGIIHQTSCVETPQQN 579
            ++GIIHQTSCVETPQQN
Sbjct: 180 QEEGIIHQTSCVETPQQN 197


>gb|PNX95813.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1351

 Score =  211 bits (538), Expect = 7e-60
 Identities = 101/196 (51%), Positives = 137/196 (69%), Gaps = 3/196 (1%)
 Frame = +1

Query: 1   EMIGSGVMHEGLIYLILEDCRANSISAGDG-GTETLPSSALWHFRLGHLSSNRIKLMLSD 177
           +MIGSG + +GL YL       +S   G    +  +P SALWHFR GH S +R++ M   
Sbjct: 387 KMIGSGKLIDGLYYLEGTCFTQSSEKFGKSCNSVAIPKSALWHFRFGHTSQHRLEQMQQM 446

Query: 178 FPFVNIDEGSIC-DICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYFL 354
           +P + I++   C D+CH ++ K+LPY LS+SRA+ C E++H DIWGP ST + HGHRYFL
Sbjct: 447 YPTITINKDDFCCDVCHLAKQKKLPYTLSNSRATHCLELLHMDIWGPFSTPTPHGHRYFL 506

Query: 355 TSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFF-LNDFYAK 531
           T +DD SR+TWI++LK K E ++ +K+ IN++E Q  + VKI+R+DNGPEF  L  FYA 
Sbjct: 507 TIVDDFSRFTWIVLLKGKFETASKIKDFINLVENQFGSKVKILRSDNGPEFLSLTTFYAS 566

Query: 532 KGIIHQTSCVETPQQN 579
           KGI+HQTSCV TPQQN
Sbjct: 567 KGILHQTSCVATPQQN 582


>dbj|GAU31820.1| hypothetical protein TSUD_58210 [Trifolium subterraneum]
          Length = 1409

 Score =  211 bits (536), Expect = 1e-59
 Identities = 103/203 (50%), Positives = 138/203 (67%), Gaps = 10/203 (4%)
 Frame = +1

Query: 1    EMIGSGVMHEGLIYL----------ILEDCRANSISAGDGGTETLPSSALWHFRLGHLSS 150
            +MIG G   +GL  L           L      SI+     +  +P SALWHFRLGH+S+
Sbjct: 487  KMIGLGDQVDGLYRLQYNHTFLASQALPQSFPKSINNVAVNSVVIPVSALWHFRLGHVSN 546

Query: 151  NRIKLMLSDFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTS 330
            NR+  M   +PF++ID  ++CD+C F+R ++LP+  S S A   +++IHFDIWGP++ +S
Sbjct: 547  NRLLRMSKLYPFLSIDNKAVCDVCQFARKRKLPFNSSYSTALHAFDLIHFDIWGPLAVSS 606

Query: 331  IHGHRYFLTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFF 510
            IHGH+YFLT LDDH+RY WI++LKSKSEV++ V+N I ++E Q + T KI+R DNG EF 
Sbjct: 607  IHGHKYFLTILDDHTRYVWIVLLKSKSEVASQVQNFIQLIENQFHKTPKIVRADNGLEFS 666

Query: 511  LNDFYAKKGIIHQTSCVETPQQN 579
            L  FYA KGIIHQ SCVET QQN
Sbjct: 667  LPSFYASKGIIHQKSCVETRQQN 689


>gb|KYP44664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 290

 Score =  197 bits (500), Expect = 1e-59
 Identities = 81/153 (52%), Positives = 116/153 (75%)
 Frame = +1

Query: 121 WHFRLGHLSSNRIKLMLSDFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHF 300
           WHFR+GHLS+ R++LM S +PF+  ++   C+ CH+ +HK+L +  S S AS C++++H 
Sbjct: 1   WHFRMGHLSTERLQLMQSCYPFLRSNKNFTCNTCHYEKHKKLSFPASKSHASNCFDLLHM 60

Query: 301 DIWGPISTTSIHGHRYFLTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKI 480
           DIWGP S  S+HGHRYFLT +DDHSR+TW+ ++ +K+E   ++ + I  +E Q N  +KI
Sbjct: 61  DIWGPCSKLSMHGHRYFLTIVDDHSRFTWVYLMHTKTETRKNITDFIAYIETQFNNKIKI 120

Query: 481 IRTDNGPEFFLNDFYAKKGIIHQTSCVETPQQN 579
           IRTDNG EF ++DF+A KGIIHQT+CVETP+QN
Sbjct: 121 IRTDNGSEFAMHDFFASKGIIHQTTCVETPEQN 153


>gb|KYP62795.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 301

 Score =  196 bits (497), Expect = 6e-59
 Identities = 92/193 (47%), Positives = 135/193 (69%), Gaps = 2/193 (1%)
 Frame = +1

Query: 7   IGSGVMHEGLIYLILEDCRANSISAG--DGGTETLPSSALWHFRLGHLSSNRIKLMLSDF 180
           IGS  + +GL  LI    + +SI++         +P   LWHFRLGHLSS R+ +M   +
Sbjct: 3   IGSVDVRDGLYQLIPVHLQPHSINSTIIHPKCNVIPID-LWHFRLGHLSSERMHIMQQQY 61

Query: 181 PFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYFLTS 360
             +N ++  +C+ CH+++ ++LP+ LS+S A++ + +IH DIWGP ST S++GHRYFLT 
Sbjct: 62  SCLNNNKNFVCNTCHYAKQRKLPFPLSNSHATQPFALIHMDIWGPYSTLSMNGHRYFLTI 121

Query: 361 LDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAKKGI 540
           +DDH+RYTW+ ++ +KSE   H+ N IN++E Q +  VKII TDNG EFF+++ +  KGI
Sbjct: 122 VDDHTRYTWVYLMCNKSETRTHITNFINLVENQFDTHVKIICTDNGNEFFMHELFHLKGI 181

Query: 541 IHQTSCVETPQQN 579
           IHQTSC+ETPQQN
Sbjct: 182 IHQTSCIETPQQN 194


>gb|KYP47160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 284

 Score =  194 bits (494), Expect = 1e-58
 Identities = 91/196 (46%), Positives = 133/196 (67%), Gaps = 4/196 (2%)
 Frame = +1

Query: 4   MIGSGVMHEGLIYLILEDC--RANSI--SAGDGGTETLPSSALWHFRLGHLSSNRIKLML 171
           MIG    ++ L YL+   C   +NSI  SA    T+      LWHFRLGH S   +K++ 
Sbjct: 9   MIGLAKANQHL-YLMHNPCVSHSNSICNSAFVSKTQNKNMFDLWHFRLGHPSYQVLKIVK 67

Query: 172 SDFPFVNIDEGSICDICHFSRHKRLPYALSSSRASKCYEMIHFDIWGPISTTSIHGHRYF 351
              P+V  ++ ++CD CH ++  RLP+ +S+S++  C+E++H DIWGPI+ TSIHGHR+F
Sbjct: 68  KHSPYVEFNDNTVCDYCHLAKQSRLPFPVSNSKSFSCFELVHMDIWGPIAITSIHGHRFF 127

Query: 352 LTSLDDHSRYTWIIMLKSKSEVSNHVKNLINMLEKQNNATVKIIRTDNGPEFFLNDFYAK 531
           LT ++D SR+TW  ++KSK+E    + N + ++E + N  +K IRTDNG EF ++DFYA+
Sbjct: 128 LTIVNDFSRHTWTFLMKSKAETRKLIHNFVALIETRFNKRIKTIRTDNGSEFLMHDFYAQ 187

Query: 532 KGIIHQTSCVETPQQN 579
            GI+HQTSC+ETPQQN
Sbjct: 188 HGILHQTSCIETPQQN 203