BLASTX nr result

ID: Astragalus22_contig00005174 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00005174
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY12700.1| RING finger protein [Trifolium pratense]                57   2e-06
dbj|GAU26569.1| hypothetical protein TSUD_266830 [Trifolium subt...    56   3e-06

>gb|PNY12700.1| RING finger protein [Trifolium pratense]
          Length = 437

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/51 (64%), Positives = 35/51 (68%)
 Frame = -2

Query: 231 NVDNIPAIVSELQTPDNIPRISMFYPSSNGRRRNDVSRQVPDEPRTRRRLR 79
           NVDNI AI SE QT D   +IS   PSSNGRRRN VS QV +EP  RRR R
Sbjct: 384 NVDNIAAIGSETQTTDRSVQISPPDPSSNGRRRNAVSVQVLNEPTRRRRRR 434


>dbj|GAU26569.1| hypothetical protein TSUD_266830 [Trifolium subterraneum]
          Length = 420

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/52 (65%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = -2

Query: 231 NVDNIPAIVSELQTPDNIPRISMFYPSS-NGRRRNDVSRQVPDEPRTRRRLR 79
           NVDNI AI SE QT D   +IS+  PSS NGRRRNDVS QV  EP  RRR R
Sbjct: 366 NVDNIAAIGSETQTTDRNVQISLPDPSSSNGRRRNDVSGQVSIEPTRRRRRR 417


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