BLASTX nr result
ID: Astragalus22_contig00004851
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Astragalus22_contig00004851
(883 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP38784.1| Retrovirus-related Pol polyprotein from transposo... 257 2e-78
gb|KYP44457.1| Retrovirus-related Pol polyprotein from transposo... 256 1e-76
gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense] 253 1e-72
gb|PNX90684.1| retrovirus-related Pol polyprotein from transposo... 233 4e-71
gb|PNX95763.1| retrotransposon-related protein, partial [Trifoli... 248 6e-71
gb|PNX93789.1| copia-type polyprotein [Trifolium pratense] 245 5e-70
dbj|GAU16533.1| hypothetical protein TSUD_167640 [Trifolium subt... 243 9e-70
gb|KYP43087.1| Retrovirus-related Pol polyprotein from transposo... 233 5e-69
dbj|GAU51371.1| hypothetical protein TSUD_247260 [Trifolium subt... 242 6e-69
gb|KYP42102.1| Retrovirus-related Pol polyprotein from transposo... 231 1e-68
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera] 241 2e-68
gb|PNX59359.1| hypothetical protein L195_g051377, partial [Trifo... 221 2e-68
gb|PRQ38021.1| putative RNA-directed DNA polymerase [Rosa chinen... 234 3e-68
emb|CBI37296.3| unnamed protein product, partial [Vitis vinifera] 239 4e-68
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen... 239 5e-68
gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinen... 238 5e-68
gb|KYP37051.1| Retrovirus-related Pol polyprotein from transposo... 238 9e-68
dbj|GAU39634.1| hypothetical protein TSUD_397220 [Trifolium subt... 224 3e-67
gb|KYP51066.1| Retrovirus-related Pol polyprotein from transposo... 223 4e-67
gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinen... 236 7e-67
>gb|KYP38784.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 560
Score = 257 bits (657), Expect = 2e-78
Identities = 116/238 (48%), Positives = 160/238 (67%)
Frame = -2
Query: 729 KEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARLE 550
+E+E + M+ D E WF+DS CSNHMCG+++ F +E +++ V+LGN++++
Sbjct: 246 EEEEEMLLMSYMDVNETQREDAWFLDSGCSNHMCGDKALFYNLNEDFRQIVKLGNNSKMS 305
Query: 549 VKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEK 370
V G+G+V+ NG H+VT V+YVP+LKNNLLS+GQL EKGL++ + SCK +YHPEK
Sbjct: 306 VLGKGNVRLKVNGFTHVVTEVFYVPELKNNLLSIGQLQEKGLSILIQNGSCK--IYHPEK 363
Query: 369 GLIIECTMKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHINNKSXXXXXXXDMV 190
GL+I+ M NR F+L M + CL T + + LWHCRYGH+++K MV
Sbjct: 364 GLVIQTEMTTNRMFVLTAVPMPQKPTCLHTTVQEIAHLWHCRYGHLSHKGLRTLQYKKMV 423
Query: 189 RGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPASNSSKR 16
GLP + ++CT C+ GKQHR IPK +WRA+QKL+LIH DICGPISP SNS KR
Sbjct: 424 HGLPPLKSPTDVCTVCMIGKQHRDPIPKKANWRATQKLQLIHADICGPISPTSNSKKR 481
>gb|KYP44457.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 256 bits (653), Expect = 1e-76
Identities = 117/242 (48%), Positives = 162/242 (66%), Gaps = 1/242 (0%)
Frame = -2
Query: 738 ISSKEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSA 559
++ E+E + M +D + + WF+DS CSNHMCG R+WF + D+ +K+ V+LGN+
Sbjct: 274 VAFNEEEELLLMAYEDLHDVQTTNAWFLDSGCSNHMCGNRAWFKEVDDTFKQHVKLGNNT 333
Query: 558 RLEVKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYH 379
R+EV G+G V+ G+ H++T+V+ VP+LKNNLLS+GQL EKGLTV F +S CK+YH
Sbjct: 334 RMEVTGKGSVRLNIKGVTHVITDVFLVPELKNNLLSIGQLQEKGLTVMF--QSGTCKLYH 391
Query: 378 PEKGLIIECTMKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHINNKSXXXXXXX 199
P+KGLI+E M N F+L + K + C ++ ++L LWH RY H+++K
Sbjct: 392 PDKGLILETNMTTNIMFILFAQSATKKDSCFHISTQDLSSLWHHRYAHLSHKGLRILQSK 451
Query: 198 DMVRGLP-KFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPASNSS 22
MVRGLP +E +C +C GKQHR IPK + WRA QKLELIH DICGPI+P+SNS
Sbjct: 452 GMVRGLPSSLSTTENVCEDCTKGKQHRDPIPKKSQWRAKQKLELIHADICGPITPSSNSQ 511
Query: 21 KR 16
KR
Sbjct: 512 KR 513
>gb|PNX96091.1| retrotransposon-related protein [Trifolium pratense]
Length = 1326
Score = 253 bits (645), Expect = 1e-72
Identities = 116/241 (48%), Positives = 164/241 (68%), Gaps = 4/241 (1%)
Frame = -2
Query: 726 EDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARLEV 547
++E + M+ + + WF+DS CSNHMCG+R+ F + DE ++ V+LGN+ ++ V
Sbjct: 271 DEEELLLMSFVELYDAKREDAWFLDSGCSNHMCGDRTMFSELDENFRHSVKLGNNTKMNV 330
Query: 546 KGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEKG 367
G+G VKF NG +VT VYY+P+L+NNLLS+GQL EKGL + +G CK ++HPEKG
Sbjct: 331 VGKGSVKFLLNGTNFIVTEVYYIPELRNNLLSIGQLQEKGLAILIKGGMCK--IFHPEKG 388
Query: 366 LIIECTMKNNRTFMLCTEIM----KKNEKCLQVTDENLGRLWHCRYGHINNKSXXXXXXX 199
LII+ M NR F L ++ ++++C ++L LWH RYGH++ K
Sbjct: 389 LIIQTNMSTNRMFTLRSQAQVSPQAQSDQCFHTKAQDLSHLWHRRYGHLSYKGLRTLLYK 448
Query: 198 DMVRGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPASNSSK 19
+MVRGLP+F +S ICT C++GKQHR IPK ++WRA+QKLELIH D+CGPISP+SNS+K
Sbjct: 449 NMVRGLPQFSISSVICTNCINGKQHRDPIPKKSNWRATQKLELIHADVCGPISPSSNSNK 508
Query: 18 R 16
R
Sbjct: 509 R 509
>gb|PNX90684.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 372
Score = 233 bits (594), Expect = 4e-71
Identities = 102/216 (47%), Positives = 144/216 (66%)
Frame = -2
Query: 663 WFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARLEVKGRGDVKFYFNGIVHMVTNVY 484
WF+DS CSNHM G + WF DE Y++ V+LGN+ ++ V GRG+VK + NGI+ ++TNVY
Sbjct: 159 WFLDSGCSNHMTGNKKWFTDIDEQYQQSVKLGNNFKMAVVGRGNVKLHVNGIMQVITNVY 218
Query: 483 YVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEKGLIIECTMKNNRTFMLCTEIMK 304
YVP+LKNNL+S+GQL+EKG++V + C+C YH ++GL ++ M NR F+ M
Sbjct: 219 YVPELKNNLISIGQLIEKGVSVLIQNGECRC--YHSKEGLFLQTKMSANRMFVFHATPMS 276
Query: 303 KNEKCLQVTDENLGRLWHCRYGHINNKSXXXXXXXDMVRGLPKFEVSEEICTECLSGKQH 124
+ C + E+ LWHCRYGH+N MV GLP+ ++C +C+ GKQ
Sbjct: 277 QFSSCFKTASEDETHLWHCRYGHLNYNGLKTLQSKKMVTGLPEIRTPSKLCNDCVMGKQQ 336
Query: 123 RAAIPKTNHWRASQKLELIHGDICGPISPASNSSKR 16
R IPK + WRA+ KL+LIH DICGPI+P+++S KR
Sbjct: 337 RKPIPKKSLWRATHKLQLIHSDICGPITPSTSSGKR 372
>gb|PNX95763.1| retrotransposon-related protein, partial [Trifolium pratense]
Length = 1327
Score = 248 bits (632), Expect = 6e-71
Identities = 117/237 (49%), Positives = 156/237 (65%)
Frame = -2
Query: 726 EDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARLEV 547
EDE + V++ KE + WF+DS CSNHM G + WF +E +K+ V+LGN +R+ V
Sbjct: 278 EDELLLMAYVEEKKE-TREEIWFLDSGCSNHMSGNKEWFTDLNEDFKQTVKLGNDSRIAV 336
Query: 546 KGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEKG 367
G G V+ + NGIV ++TNVYY+P+LKNNLLS+GQL EKGLTV + +CK V HP +G
Sbjct: 337 TGIGSVRLWVNGIVQVITNVYYIPELKNNLLSIGQLQEKGLTVLIQNGTCK--VLHPSRG 394
Query: 366 LIIECTMKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHINNKSXXXXXXXDMVR 187
I+ M NR F +++ KC+QV ++ RLWH R+GH+N K MV
Sbjct: 395 PIMHSDMSGNRMFYFLAKMVSTLPKCMQVEADDESRLWHSRFGHLNYKGLRTLAYRGMVE 454
Query: 186 GLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPASNSSKR 16
GLP + +++CT CL GKQHR IPK N WRA+ KL+L+H DICGPISP SNS+KR
Sbjct: 455 GLPTVKTPQKLCTHCLVGKQHRDPIPKRNLWRATHKLQLVHSDICGPISPISNSNKR 511
>gb|PNX93789.1| copia-type polyprotein [Trifolium pratense]
Length = 1347
Score = 245 bits (625), Expect = 5e-70
Identities = 112/246 (45%), Positives = 155/246 (63%)
Frame = -2
Query: 753 ATIEEISSKEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVR 574
A E KE+E + M+ + K WF+DS CSNHM G + WF DE ++ V+
Sbjct: 271 ANYAEFEEKEEEILL-MSYVEIKHDEKEEMWFLDSGCSNHMSGNKKWFSDLDESFRHTVK 329
Query: 573 LGNSARLEVKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCK 394
LGN +R+ V G+G+V+ NG +++NVYY+P+LKNNLLS+GQL +KGL++ + K
Sbjct: 330 LGNDSRMAVIGKGNVRMRVNGFTQVISNVYYIPELKNNLLSIGQLQDKGLSILIQHG--K 387
Query: 393 CKVYHPEKGLIIECTMKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHINNKSXX 214
C +YHP KGLI+E M N+ F L +M C Q EN LWHCR+GH++ +
Sbjct: 388 CMIYHPTKGLIMETIMSGNKMFCLVASMMPNESTCFQNVSENESYLWHCRFGHLSYQGLR 447
Query: 213 XXXXXDMVRGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPA 34
MV GLP ++ +++CTECL GKQHR ++ K + WRAS KL+L+H DICGPI P
Sbjct: 448 TLFYKKMVNGLPSIQIPKKLCTECLIGKQHRDSMSKKSLWRASNKLQLVHADICGPIKPE 507
Query: 33 SNSSKR 16
SNS+KR
Sbjct: 508 SNSNKR 513
>dbj|GAU16533.1| hypothetical protein TSUD_167640 [Trifolium subterraneum]
Length = 1103
Score = 243 bits (621), Expect = 9e-70
Identities = 119/251 (47%), Positives = 164/251 (65%)
Frame = -2
Query: 768 EELVLATIEEISSKEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGY 589
EE++L E SS +V W++DS CSNHMCG + WF DE +
Sbjct: 274 EEVLLMAHESTSSNNPRAKV---------------WYIDSGCSNHMCGIKEWFHDLDESF 318
Query: 588 KKFVRLGNSARLEVKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFE 409
++ VRLG+ +++ V G+G+VK NGIV ++T VY++P LKNNLLS+GQL EK LT F
Sbjct: 319 RESVRLGDDSQMSVMGKGNVKLQMNGIVQIITGVYFIPKLKNNLLSLGQLQEKNLT--FV 376
Query: 408 GESCKCKVYHPEKGLIIECTMKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHIN 229
++ CKVYH +KG+I+ M +N+ F + E + CLQ E++ +LWHCRYGH+N
Sbjct: 377 IKNNWCKVYHRDKGMIMCSQMASNKLFPIMAEA---KQVCLQANIEDITQLWHCRYGHLN 433
Query: 228 NKSXXXXXXXDMVRGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICG 49
K +MV GLPKFE S +C +CL GKQHR +IPKT++W++S++LELIH DICG
Sbjct: 434 IKGLQNLQQKNMVIGLPKFEESNHVCADCLRGKQHRESIPKTSNWKSSKRLELIHSDICG 493
Query: 48 PISPASNSSKR 16
PI+P SNS+KR
Sbjct: 494 PITPVSNSNKR 504
>gb|KYP43087.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 551
Score = 233 bits (593), Expect = 5e-69
Identities = 106/207 (51%), Positives = 144/207 (69%), Gaps = 1/207 (0%)
Frame = -2
Query: 633 MCGERSWFCKFDEGYKKFVRLGNSARLEVKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLL 454
MCG R+WF + D+ +K+ V+LGN+ R+EV G+G V+ G+ H++T+V+ VP+LKNNLL
Sbjct: 1 MCGNRAWFKEVDDTFKQHVKLGNNTRMEVTGKGSVRLNIKGVTHIITDVFLVPELKNNLL 60
Query: 453 SVGQLLEKGLTVQFEGESCKCKVYHPEKGLIIECTMKNNRTFMLCTEIMKKNEKCLQVTD 274
S+GQL EKGLTV F +S CK+YHP+KGLI+E M NR F+L + K + C ++
Sbjct: 61 SIGQLQEKGLTVMF--QSGTCKLYHPDKGLILETNMTTNRMFILFAQSATKKDSCFHIST 118
Query: 273 ENLGRLWHCRYGHINNKSXXXXXXXDMVRGLP-KFEVSEEICTECLSGKQHRAAIPKTNH 97
++L LWH RY H+++K MVRGLP +E++C +C+ GKQHR IPK +
Sbjct: 119 QDLSSLWHRRYAHLSHKGLRILQSKGMVRGLPSSLSTTEKVCEDCMKGKQHRDPIPKKSQ 178
Query: 96 WRASQKLELIHGDICGPISPASNSSKR 16
WRA QKLELIH DICGPI P+SNS KR
Sbjct: 179 WRAKQKLELIHADICGPIIPSSNSQKR 205
>dbj|GAU51371.1| hypothetical protein TSUD_247260 [Trifolium subterraneum]
Length = 1980
Score = 242 bits (617), Expect = 6e-69
Identities = 120/242 (49%), Positives = 158/242 (65%), Gaps = 4/242 (1%)
Frame = -2
Query: 729 KEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARLE 550
+E E V M D G W++DS CSNHMCG+ S FC+ +EG+ K VRLGN A +
Sbjct: 273 EESEEMVLMAYVDTFGGDRDVVWYIDSGCSNHMCGDSSLFCELEEGFNKVVRLGNYASMN 332
Query: 549 VKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEK 370
V G+G V+ G+ ++V +VYYVP LKNNLLSVGQL E+GL V +S +C++YH K
Sbjct: 333 VVGKGSVRLNVKGVNYLVRDVYYVPGLKNNLLSVGQLQERGLAVLM--QSNECRIYHHTK 390
Query: 369 GLIIECTMKNNRTFML--CTEIMKK--NEKCLQVTDENLGRLWHCRYGHINNKSXXXXXX 202
GL+ + M NR F+L T+ +KK E+C QVT +++ LWH R+GH++ K
Sbjct: 391 GLVFQTNMTANRMFVLLSSTQSIKKENKEECFQVTTDDVAHLWHRRFGHLSYKGLKTLQT 450
Query: 201 XDMVRGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPASNSS 22
+MVRGLP F V E +CT CL GKQHR I + + WRAS+KLEL+H DICGPISP S +
Sbjct: 451 KNMVRGLPSFSVGEIVCTNCLKGKQHRDVISRRSTWRASEKLELVHADICGPISPFSEGN 510
Query: 21 KR 16
KR
Sbjct: 511 KR 512
>gb|KYP42102.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 538
Score = 231 bits (590), Expect = 1e-68
Identities = 105/247 (42%), Positives = 161/247 (65%)
Frame = -2
Query: 756 LATIEEISSKEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFV 577
+A E + +E + M + E WF+DS CSNHMCG+R +F DE + V
Sbjct: 266 VANFAESQVESEEHMLLMAYVEEIEQHKTDMWFLDSGCSNHMCGKREYFSDLDENFTDLV 325
Query: 576 RLGNSARLEVKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESC 397
+LGN++ + V G+G+++ +GI+ +++ V+YV +LKNNLLS+GQL EKGL++ F+
Sbjct: 326 KLGNNSNIVVNGKGNIRLKIDGIISIISGVFYVLELKNNLLSLGQLQEKGLSILFQ--QG 383
Query: 396 KCKVYHPEKGLIIECTMKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHINNKSX 217
CK+YHP+KGLI++ M NR F+L + + + C ++ E++ LWHCR+GH++ K
Sbjct: 384 HCKIYHPDKGLIMKANMFANRMFILHSISLPISSTCFKIATEDVAHLWHCRFGHLSFKGL 443
Query: 216 XXXXXXDMVRGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISP 37
+MV+GLP + ++C +C++GKQHR + P + WRASQ L+L+H DICGPI P
Sbjct: 444 QTLQQKEMVKGLPLLKSPSKLCKDCIAGKQHRDSFPIKSSWRASQILQLVHADICGPIKP 503
Query: 36 ASNSSKR 16
ASNS+KR
Sbjct: 504 ASNSNKR 510
>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
Length = 2408
Score = 241 bits (614), Expect = 2e-68
Identities = 109/246 (44%), Positives = 158/246 (64%)
Frame = -2
Query: 753 ATIEEISSKEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVR 574
A E+ KE+ + M+ + + WF+DS CSNHMC + WF DE +++ V+
Sbjct: 209 ANYAELEEKEE--MLLMSYVELNQSRREDVWFLDSGCSNHMCANKEWFLDLDEEFRQSVK 266
Query: 573 LGNSARLEVKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCK 394
LGN++++ V G+ +++ G+ ++T+V+Y+P+LKNNLLSVGQL E+G+ + + C+
Sbjct: 267 LGNNSKMAVLGKDNIRLQIAGVTQVITDVFYIPELKNNLLSVGQLQERGVAILIQHGVCR 326
Query: 393 CKVYHPEKGLIIECTMKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHINNKSXX 214
VYHP+KGLI++ M R F+L I+ K C Q E+ LWHCRYGH++ K
Sbjct: 327 --VYHPKKGLIMQTAMSTKRMFILSARILSKAPTCFQTILEDNTHLWHCRYGHLSFKGLR 384
Query: 213 XXXXXDMVRGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPA 34
MVRGLP+ + +ICT+C+ GKQHR AIPK + WRASQ+L+L+H DICGPI P
Sbjct: 385 TLQYKQMVRGLPQLKAPSKICTDCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPI 444
Query: 33 SNSSKR 16
SNS KR
Sbjct: 445 SNSKKR 450
>gb|PNX59359.1| hypothetical protein L195_g051377, partial [Trifolium pratense]
Length = 226
Score = 221 bits (564), Expect = 2e-68
Identities = 98/215 (45%), Positives = 140/215 (65%)
Frame = -2
Query: 663 WFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARLEVKGRGDVKFYFNGIVHMVTNVY 484
WF+DS CSNHM G + WF DE Y++ V+LGN+ ++ V GRG+V+ + NGI+ ++TNVY
Sbjct: 14 WFLDSGCSNHMTGNKKWFTDIDEQYQQSVKLGNNFKMAVVGRGNVRLHVNGIMQVITNVY 73
Query: 483 YVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEKGLIIECTMKNNRTFMLCTEIMK 304
YVP+LKNNL+S+ QL+EKG++V + C+C YH ++GL ++ M NR F+ M
Sbjct: 74 YVPELKNNLISIRQLIEKGVSVLIQNGECRC--YHSKEGLFLQTKMSANRMFVFHATPMS 131
Query: 303 KNEKCLQVTDENLGRLWHCRYGHINNKSXXXXXXXDMVRGLPKFEVSEEICTECLSGKQH 124
+ C + E+ LWHCRYGH+N MV GLP+ + C +C+ GKQ
Sbjct: 132 QFSSCFKTASEDETHLWHCRYGHLNYNGLKTLQSKKMVTGLPEIRTPSKQCNDCVMGKQQ 191
Query: 123 RAAIPKTNHWRASQKLELIHGDICGPISPASNSSK 19
R IPK + W A+ KL+LIH DICGPI+P+++S K
Sbjct: 192 RKFIPKKSLWIATHKLQLIHSDICGPITPSTSSGK 226
>gb|PRQ38021.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 719
Score = 234 bits (598), Expect = 3e-68
Identities = 106/239 (44%), Positives = 157/239 (65%), Gaps = 1/239 (0%)
Frame = -2
Query: 729 KEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARLE 550
+EDE + V + + WF+DS CSNHMC + WF DE ++ V+LGN+AR+
Sbjct: 288 EEDELLLMAHV-ERNDSKPEDVWFLDSGCSNHMCCNKDWFTNIDEEFRHSVKLGNNARMS 346
Query: 549 VKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEK 370
V G+G ++ +G+ ++++VY+VP+L+NNLLS+GQL EKGL + + CK +YH +K
Sbjct: 347 VMGKGSIRLKVDGLTQVISDVYFVPELRNNLLSIGQLQEKGLAILIQHGVCK--IYHSKK 404
Query: 369 GLIIECTMKNNRTFMLCTEIMKKN-EKCLQVTDENLGRLWHCRYGHINNKSXXXXXXXDM 193
GLI++ M NR F+L ++ + C+Q + ++L LWHCRY H+N K M
Sbjct: 405 GLIMQTPMTANRMFVLLANVVVTDFSTCMQASSDDLSHLWHCRYSHLNYKGLKTLHYRKM 464
Query: 192 VRGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPASNSSKR 16
V+GLP+ + S +C +CL GKQ R +IPK++ WRASQ+L+L+H DICGPI+P SNS KR
Sbjct: 465 VKGLPQIKASARVCHDCLVGKQSRDSIPKSSQWRASQRLQLVHADICGPITPTSNSDKR 523
>emb|CBI37296.3| unnamed protein product, partial [Vitis vinifera]
Length = 3048
Score = 239 bits (611), Expect = 4e-68
Identities = 109/239 (45%), Positives = 158/239 (66%)
Frame = -2
Query: 732 SKEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARL 553
+K E + M D + S WF+DS CSNHMCG++ +F FD ++ V+LGN+ +
Sbjct: 297 AKNQEEMLLMAYVDLNKTSREDTWFLDSGCSNHMCGKKDYFSDFDGTFRDSVKLGNNTSM 356
Query: 552 EVKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPE 373
V G+G+V+ N + ++T V+YVP+LKNNLLS+GQL EKGLT+ F+ KCKV+H +
Sbjct: 357 SVLGKGNVRLKVNEMTQIITGVFYVPELKNNLLSIGQLQEKGLTILFQHG--KCKVFHSQ 414
Query: 372 KGLIIECTMKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHINNKSXXXXXXXDM 193
KGLI++ M +NR FML + C E++ +LWHCRYGH++ + M
Sbjct: 415 KGLIMDTKMSSNRMFMLYALSQPISSTCFNTVTEDILQLWHCRYGHLSFQGLKTLQQRKM 474
Query: 192 VRGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPASNSSKR 16
V GLP+F+ ++C +CL GKQHR++IPK ++WRA++ L+L+H DICGPI+P SNS KR
Sbjct: 475 VNGLPQFQPPSKLCKDCLVGKQHRSSIPKKSNWRAAEILQLVHADICGPINPISNSKKR 533
>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1316
Score = 239 bits (610), Expect = 5e-68
Identities = 106/237 (44%), Positives = 154/237 (64%)
Frame = -2
Query: 726 EDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARLEV 547
E+E + M + WF+DS CSNHM G + WF +E +++ V+LGN++++ V
Sbjct: 278 ENEEMLLMAYVELNNSKMEEVWFLDSGCSNHMSGNKQWFTDLNEQFRQSVKLGNNSKMAV 337
Query: 546 KGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEKG 367
G+G+V+ NG+ + T+VYY+P+LKNNLLS+GQL EKG+T+ C+ +YHP KG
Sbjct: 338 MGKGNVRLQANGVTQVFTDVYYIPELKNNLLSIGQLQEKGVTILIRNGMCQ--IYHPRKG 395
Query: 366 LIIECTMKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHINNKSXXXXXXXDMVR 187
LI++ M NR F++ ++ + C Q E+ LWHCRYGH++ K MV+
Sbjct: 396 LIMQTKMSANRMFVIRANMLPQASACFQTVSEDNTHLWHCRYGHLSFKGLRSLQYRKMVK 455
Query: 186 GLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPASNSSKR 16
GLP F++S ++C +C+ GKQHR +IPK + WRAS +L+LIH DICGPI P SNS KR
Sbjct: 456 GLPDFKMSSKLCKDCMVGKQHRESIPKKSMWRASHRLQLIHSDICGPIKPLSNSRKR 512
>gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1044
Score = 238 bits (607), Expect = 5e-68
Identities = 103/216 (47%), Positives = 148/216 (68%)
Frame = -2
Query: 663 WFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARLEVKGRGDVKFYFNGIVHMVTNVY 484
WF+DS CSNHM G + WF +E +++ V+LGN++++ V G+G+V+ NG+ + T+VY
Sbjct: 18 WFLDSGCSNHMSGNKQWFTDLNEQFRQSVKLGNNSKMAVMGKGNVRLQANGVTQVFTDVY 77
Query: 483 YVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEKGLIIECTMKNNRTFMLCTEIMK 304
Y+P+LKNNLLS+GQL EKG+T+ C+ +YHP KGLI++ M NR F++ ++
Sbjct: 78 YIPELKNNLLSIGQLQEKGVTILIRNGMCQ--IYHPRKGLIMQTKMSANRMFVIRANMLP 135
Query: 303 KNEKCLQVTDENLGRLWHCRYGHINNKSXXXXXXXDMVRGLPKFEVSEEICTECLSGKQH 124
+ C Q E+ LWHCRYGH++ K MV+GLP F++S ++C +C+ GKQH
Sbjct: 136 QASACFQTVSEDNTHLWHCRYGHLSFKGLRTLQYRKMVKGLPDFKMSSKLCKDCMVGKQH 195
Query: 123 RAAIPKTNHWRASQKLELIHGDICGPISPASNSSKR 16
R +IPK + WRAS +L+LIH DICGPI P SNS KR
Sbjct: 196 RESIPKKSMWRASHRLQLIHSDICGPIKPLSNSRKR 231
>gb|KYP37051.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1079
Score = 238 bits (606), Expect = 9e-68
Identities = 115/248 (46%), Positives = 160/248 (64%), Gaps = 3/248 (1%)
Frame = -2
Query: 750 TIEEISSKEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKF-DEGYKKFVR 574
T EE + EDE + + ++ DWF+DS CSNHM G + WF + +EG K V+
Sbjct: 248 TFEEATEVEDEILL-VAYEEVTHVVQMEDWFLDSGCSNHMTGNKLWFTEIHEEGLHKTVK 306
Query: 573 LGNSARLEVKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCK 394
LGN LEV +G+++ N I H++++VYYVP+LK NLLS+GQL EKGLT+ + +CK
Sbjct: 307 LGNDTTLEVAAKGNIRVQINNIAHVISDVYYVPELKTNLLSLGQLQEKGLTILIQHGACK 366
Query: 393 CKVYHPEKGLIIECTMKNNRTFMLCTEIMKKNEKCLQVTD--ENLGRLWHCRYGHINNKS 220
++HP++GLII TM+ +R F L + ++ +C QV D E +LWH R+GH+N +
Sbjct: 367 --IFHPDRGLIIHTTMRGDRMFYLSASMFPQHSRCFQVEDISEKEMQLWHRRFGHLNFRG 424
Query: 219 XXXXXXXDMVRGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPIS 40
MV GLP ++S +CT CL GKQHR IPK + WRAS KL+L+H ++CGPIS
Sbjct: 425 LNTLAQEQMVIGLPSLKISTVVCTTCLVGKQHRDTIPKLSSWRASTKLQLVHANVCGPIS 484
Query: 39 PASNSSKR 16
PASNS KR
Sbjct: 485 PASNSGKR 492
>dbj|GAU39634.1| hypothetical protein TSUD_397220 [Trifolium subterraneum]
Length = 417
Score = 224 bits (572), Expect = 3e-67
Identities = 107/232 (46%), Positives = 149/232 (64%), Gaps = 1/232 (0%)
Frame = -2
Query: 705 MTVKDAKEGSNRSD-WFMDSACSNHMCGERSWFCKFDEGYKKFVRLGNSARLEVKGRGDV 529
MT D+ + ++ WF+DS CSNHM G + W +FDE Y +V+LG+ +R+ VKG+G++
Sbjct: 187 MTKTDSNQHKYENETWFLDSGCSNHMVGHKDWMFEFDETYSDYVKLGDDSRMAVKGKGNI 246
Query: 528 KFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEKGLIIECT 349
K NG+VH+++NVY+VP LK NLLS+GQL +K +TV F+ + CKVYH +KGL+
Sbjct: 247 KLCINGVVHVISNVYFVPGLKTNLLSIGQLQQKQITVIFKND--MCKVYHDDKGLLFTTK 304
Query: 348 MKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHINNKSXXXXXXXDMVRGLPKFE 169
M NNR +++ ++ + CL+ + LWH R+ H++ K MVRGLP+ E
Sbjct: 305 MTNNRMYIVSATVI--SPMCLKNAKQESTLLWHNRFSHLSFKGLNTLAKKQMVRGLPELE 362
Query: 168 VSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPASNSSKRM 13
EE C +CLSGKQHR I K WRAS K ELIH DIC PI+P+SN M
Sbjct: 363 ELEENCVDCLSGKQHRGTIQKQAKWRASTKFELIHSDICCPINPSSNGGSSM 414
>gb|KYP51066.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 392
Score = 223 bits (569), Expect = 4e-67
Identities = 106/219 (48%), Positives = 148/219 (67%), Gaps = 3/219 (1%)
Frame = -2
Query: 663 WFMDSACSNHMCGERSWFCKF-DEGYKKFVRLGNSARLEVKGRGDVKFYFNGIVHMVTNV 487
WF+DS CSNHM G + WF K +EG+ + V+LGN+ + V +G ++ NG H++TNV
Sbjct: 10 WFLDSGCSNHMTGNKLWFTKVSEEGFSRSVKLGNNTTMVVTTKGSIRIQINGTSHVITNV 69
Query: 486 YYVPDLKNNLLSVGQLLEKGLTVQFEGESCKCKVYHPEKGLIIECTMKNNRTFMLCTEIM 307
YYVP+LK NLLS+GQL EKGL V F+ ++CK +YHP++GLI+ MK NR F L +
Sbjct: 70 YYVPELKTNLLSLGQLQEKGLAVLFQNDTCK--IYHPDRGLILHTNMKGNRMFYLTASMT 127
Query: 306 KKNEKCLQVTD--ENLGRLWHCRYGHINNKSXXXXXXXDMVRGLPKFEVSEEICTECLSG 133
+ +CLQ D + +LWH R+GH++ K+ MV LP+ ++ + +CT CL G
Sbjct: 128 SQPLRCLQTEDSSDRETQLWHKRFGHLHFKALNILANKQMVISLPQMKLPQTLCTTCLVG 187
Query: 132 KQHRAAIPKTNHWRASQKLELIHGDICGPISPASNSSKR 16
KQHR IPK + RAS KL+LIH D+CGPISPAS+++KR
Sbjct: 188 KQHRDTIPKQSSSRASAKLQLIHVDVCGPISPASHNNKR 226
>gb|PRQ17740.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1302
Score = 236 bits (602), Expect = 7e-67
Identities = 105/246 (42%), Positives = 157/246 (63%)
Frame = -2
Query: 753 ATIEEISSKEDECRVQMTVKDAKEGSNRSDWFMDSACSNHMCGERSWFCKFDEGYKKFVR 574
A E+ KE+ + M + WF+DS CSNHM G + WF +E +++ V+
Sbjct: 269 ANYAELDEKEE--MLLMAYVELNNSKMEEVWFLDSGCSNHMSGNKKWFIDLNEQFRQSVK 326
Query: 573 LGNSARLEVKGRGDVKFYFNGIVHMVTNVYYVPDLKNNLLSVGQLLEKGLTVQFEGESCK 394
LGN++++ V G+G+V+ NG+ + T+VYY+P+LKNNLLS+GQL EKG+ + + C+
Sbjct: 327 LGNNSKMAVMGKGNVRLQANGVTQVFTDVYYIPELKNNLLSIGQLQEKGVAILIQNGMCQ 386
Query: 393 CKVYHPEKGLIIECTMKNNRTFMLCTEIMKKNEKCLQVTDENLGRLWHCRYGHINNKSXX 214
+YHP KGLI++ M NR F++ ++ + C Q E+ LWHCRYGH++ K
Sbjct: 387 --IYHPRKGLIMQTKMSANRMFVILANMLPQASACFQTVSEDNTHLWHCRYGHLSFKGLK 444
Query: 213 XXXXXDMVRGLPKFEVSEEICTECLSGKQHRAAIPKTNHWRASQKLELIHGDICGPISPA 34
+MV+GLP F++ ++C +C+ GKQHR +IPK + WRAS +L+LIH DICGPI P
Sbjct: 445 TLQYRNMVKGLPDFKMPSKLCKDCMVGKQHRESIPKKSMWRASHRLQLIHSDICGPIKPL 504
Query: 33 SNSSKR 16
SN+ KR
Sbjct: 505 SNNRKR 510