BLASTX nr result

ID: Astragalus22_contig00003422 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00003422
         (320 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA86949.1| ribosomal protein L27 homolog, partial [Pisum sat...    49   8e-06
gb|AFK44178.1| unknown [Lotus japonicus] >gi|388515363|gb|AFK457...    51   9e-06

>gb|AAA86949.1| ribosomal protein L27 homolog, partial [Pisum sativum]
          Length = 49

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 26/41 (63%), Positives = 26/41 (63%)
 Frame = -3

Query: 318 KDVVVPDSLVSKDKKVTALXXXXXXXXXXXXTGKNRWFFTK 196
           KD VVPD L SKDKKVTAL            TGKNRWFFTK
Sbjct: 6   KDAVVPDVLQSKDKKVTALKETKKSVEERFKTGKNRWFFTK 46


>gb|AFK44178.1| unknown [Lotus japonicus]
 gb|AFK45743.1| unknown [Lotus japonicus]
          Length = 135

 Score = 51.2 bits (121), Expect = 9e-06
 Identities = 27/41 (65%), Positives = 27/41 (65%)
 Frame = -3

Query: 318 KDVVVPDSLVSKDKKVTALXXXXXXXXXXXXTGKNRWFFTK 196
           KDVVVPDSL SKDKKV AL            TGKNRWFFTK
Sbjct: 92  KDVVVPDSLQSKDKKVAALKETKKRLEERFKTGKNRWFFTK 132


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