BLASTX nr result

ID: Angelica27_contig00040814 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00040814
         (383 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017236140.1 PREDICTED: pentatricopeptide repeat-containing pr...   175   2e-48
KZN06973.1 hypothetical protein DCAR_007810 [Daucus carota subsp...   155   3e-41
XP_002533784.2 PREDICTED: pentatricopeptide repeat-containing pr...    58   3e-07
XP_015900683.1 PREDICTED: pentatricopeptide repeat-containing pr...    57   5e-07
XP_004233191.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   2e-06
XP_018811391.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   4e-06
XP_017190625.1 PREDICTED: uncharacterized protein LOC108174406 [...    52   8e-06

>XP_017236140.1 PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic [Daucus carota subsp. sativus]
          Length = 921

 Score =  175 bits (444), Expect = 2e-48
 Identities = 89/125 (71%), Positives = 93/125 (74%)
 Frame = +1

Query: 4   MVVILHTNTHMGIKKIESFGSFHTPHLKFSSGFLISKGPIFSFNFKKIKKVEQKNHGVLL 183
           MVVILHTNTHMGIKK+ES  SFHTP   FSSGFLISK P FSF  KK KK EQKN GV L
Sbjct: 1   MVVILHTNTHMGIKKVESLASFHTPQFNFSSGFLISKAPSFSFGVKKTKKAEQKNIGVFL 60

Query: 184 GYRNLGKFSVVMKGGSGDGGVIEKELEFKPSFDEYLKAMEXXXXXXXXXXXXXNRIGKSG 363
           GY N GK SVVMKGGSGDGGVIEKELEFKPSFDEYLKAME             ++  K G
Sbjct: 61  GYGNCGKISVVMKGGSGDGGVIEKELEFKPSFDEYLKAMENVQSVRDKRKQAKSKTRKGG 120

Query: 364 EDSGL 378
           ED+GL
Sbjct: 121 EDNGL 125


>KZN06973.1 hypothetical protein DCAR_007810 [Daucus carota subsp. sativus]
          Length = 911

 Score =  155 bits (391), Expect = 3e-41
 Identities = 79/115 (68%), Positives = 83/115 (72%)
 Frame = +1

Query: 34  MGIKKIESFGSFHTPHLKFSSGFLISKGPIFSFNFKKIKKVEQKNHGVLLGYRNLGKFSV 213
           MGIKK+ES  SFHTP   FSSGFLISK P FSF  KK KK EQKN GV LGY N GK SV
Sbjct: 1   MGIKKVESLASFHTPQFNFSSGFLISKAPSFSFGVKKTKKAEQKNIGVFLGYGNCGKISV 60

Query: 214 VMKGGSGDGGVIEKELEFKPSFDEYLKAMEXXXXXXXXXXXXXNRIGKSGEDSGL 378
           VMKGGSGDGGVIEKELEFKPSFDEYLKAME             ++  K GED+GL
Sbjct: 61  VMKGGSGDGGVIEKELEFKPSFDEYLKAMENVQSVRDKRKQAKSKTRKGGEDNGL 115


>XP_002533784.2 PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic [Ricinus communis]
          Length = 911

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
 Frame = +1

Query: 4   MVVILHTNTHMGIKKIESFGSFHTPHLK---FSSGFLISKGPIFS--FNFKKIKKVEQKN 168
           M +I+ TN  +G   +E  G+      +    SSGFL S  P F    N K  KK+   +
Sbjct: 1   MEMIIMTNGQLGFSCLERSGNLTCSCSRKPNSSSGFLSSWRPSFGVPLNSKSEKKMGAFD 60

Query: 169 HGVLLGYRNLGKFSVVMKGGSGDGGVIEKELEFKPSFDEYLKAME 303
            G+ +   + G     + GG    G++EKELEFKPSFDEYLKAME
Sbjct: 61  FGLRIKALSSGDSDNRLVGG----GILEKELEFKPSFDEYLKAME 101


>XP_015900683.1 PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic-like [Ziziphus jujuba]
          Length = 856

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
 Frame = +1

Query: 4   MVVILHTNTHMGIKKIESFG---SFHTPHLKFSSGFLISKGPIFSFNFKKIKKVEQKNHG 174
           MVV++ +N  MGI   +  G   S   P+    S F I   P F  +     +V ++   
Sbjct: 1   MVVMIMSNGQMGISNFQRPGILDSGFKPNSFSLSAFSIHWRPTFGVDLNCKNRVLKRG-- 58

Query: 175 VLLGYRNLGKFSVVMKGGSGDGGVIEKELEFKPSFDEYLKAME 303
                  + K  V+ KGG G  GV+EKE EFKPSFDEYLK ME
Sbjct: 59  ------TISK--VLSKGGGGSDGVLEKEFEFKPSFDEYLKVME 93


>XP_004233191.1 PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic [Solanum lycopersicum]
          Length = 753

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 44/104 (42%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
 Frame = +1

Query: 4   MVVILHTNTHMGIKKIESF-GSFHTPHLK---FSSGFLISKGPIFSFNFKKIKKVEQKNH 171
           MV I+ T    G      F G F + +L+   FSSGF IS+ P    +  K K  +QK  
Sbjct: 1   MVAIILTEALFGASLCTDFNGVFGSNYLRCPCFSSGFSISETPTLEISLGKKKVKKQK-- 58

Query: 172 GVLLGYRNLGKFSVVMKGGSGDGGVIEKELEFKPSFDEYLKAME 303
                 RN G  S+V+  G  D  +  +ELEFKPSFDEYLKAME
Sbjct: 59  ------RNAG--SIVVSCGL-DNVINREELEFKPSFDEYLKAME 93


>XP_018811391.1 PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic [Juglans regia]
          Length = 942

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
 Frame = +1

Query: 10  VILHTNTHMGIKKIESFGSF--HTPHLKFSS-GFLISKGPIFSFNFKKIKKVEQKNHGVL 180
           V+  +N  MG+   E +G+F  +     FSS   LI + PI       ++K E+K     
Sbjct: 4   VVKCSNAQMGVSYFERYGAFASNCSCNSFSSYELLIPRKPICRIGLT-VRKNEKKVPVFG 62

Query: 181 LGYRNLGKFSVVMKGGSGD----GGVIEKELEFKPSFDEYLKAME 303
             +RN    + ++K  S +    GG++EKELEFKPSFDE LKAME
Sbjct: 63  FKFRNSNTINALLKEESDNRLVSGGLLEKELEFKPSFDECLKAME 107


>XP_017190625.1 PREDICTED: uncharacterized protein LOC108174406 [Malus domestica]
          Length = 172

 Score = 52.4 bits (124), Expect = 8e-06
 Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
 Frame = +1

Query: 4   MVVILHTNTHMGIKKIESFGSFHT---PHLKFSSGFLISKGPIFSFNFKKIKKVEQKNHG 174
           MV ++  N  +G+   +S G F T   P    SSGF I + P+F       +K  +KN  
Sbjct: 1   MVELVMANAQLGVSNFQSNGIFVTNCSPEPFPSSGFSIFRRPVFGVRL--YEKNVRKNRV 58

Query: 175 VLLGYRNLGKF-SVVMKGGSGDGGVIEKELEFKPSFDEYLKAM 300
             + + N   F S V K GS    ++E E EFKPSFD+YLK M
Sbjct: 59  FGINFVNSRTFISAVSKEGSE---ILEIEFEFKPSFDQYLKVM 98


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