BLASTX nr result
ID: Angelica27_contig00039798
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica27_contig00039798
(400 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013622370.1 PREDICTED: small nuclear ribonucleoprotein-associ... 92 4e-20
XP_013685682.1 PREDICTED: small nuclear ribonucleoprotein-associ... 92 4e-20
XP_013662123.1 PREDICTED: small nuclear ribonucleoprotein-associ... 92 5e-20
XP_019578846.1 PREDICTED: small nuclear ribonucleoprotein-associ... 92 5e-20
XP_008239308.1 PREDICTED: LOW QUALITY PROTEIN: small nuclear rib... 92 5e-20
NP_193777.1 small nuclear ribonucleoprotein associated protein B... 92 5e-20
XP_002867880.1 hypothetical protein ARALYDRAFT_492815 [Arabidops... 92 5e-20
XP_018446744.1 PREDICTED: small nuclear ribonucleoprotein-associ... 92 6e-20
JAU21035.1 Small nuclear ribonucleoprotein-associated protein B ... 92 6e-20
XP_010449168.1 PREDICTED: small nuclear ribonucleoprotein-associ... 92 6e-20
XP_010439573.1 PREDICTED: small nuclear ribonucleoprotein-associ... 92 6e-20
XP_006413865.1 hypothetical protein EUTSA_v10026002mg [Eutrema s... 92 6e-20
XP_004298981.1 PREDICTED: small nuclear ribonucleoprotein-associ... 92 6e-20
XP_013596195.1 PREDICTED: small nuclear ribonucleoprotein-associ... 91 7e-20
XP_007207298.1 hypothetical protein PRUPE_ppa015979mg [Prunus pe... 92 7e-20
XP_010537351.1 PREDICTED: small nuclear ribonucleoprotein-associ... 92 7e-20
BAD43836.1 unknown protein [Arabidopsis thaliana] 91 7e-20
NP_199263.1 Small nuclear ribonucleoprotein family protein [Arab... 91 7e-20
AAM61039.1 putative snRNP protein [Arabidopsis thaliana] 91 7e-20
XP_002865361.1 hypothetical protein ARALYDRAFT_494537 [Arabidops... 91 7e-20
>XP_013622370.1 PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like isoform X1 [Brassica oleracea var. oleracea]
XP_013622371.1 PREDICTED: small nuclear
ribonucleoprotein-associated protein B'-like isoform X2
[Brassica oleracea var. oleracea] XP_013622372.1
PREDICTED: small nuclear ribonucleoprotein-associated
protein B'-like isoform X2 [Brassica oleracea var.
oleracea]
Length = 242
Score = 91.7 bits (226), Expect = 4e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_013685682.1 PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like isoform X1 [Brassica napus] XP_013685684.1
PREDICTED: small nuclear ribonucleoprotein-associated
protein B'-like isoform X2 [Brassica napus]
XP_013685685.1 PREDICTED: small nuclear
ribonucleoprotein-associated protein B'-like isoform X2
[Brassica napus] CDY31435.1 BnaC03g63890D [Brassica
napus]
Length = 242
Score = 91.7 bits (226), Expect = 4e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_013662123.1 PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like isoform X1 [Brassica napus] XP_013662124.1
PREDICTED: small nuclear ribonucleoprotein-associated
protein B'-like isoform X1 [Brassica napus]
XP_013662125.1 PREDICTED: small nuclear
ribonucleoprotein-associated protein B'-like isoform X2
[Brassica napus] CDX76455.1 BnaA08g09450D [Brassica
napus]
Length = 251
Score = 91.7 bits (226), Expect = 5e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_019578846.1 PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like, partial [Rhinolophus sinicus]
Length = 252
Score = 91.7 bits (226), Expect = 5e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_008239308.1 PREDICTED: LOW QUALITY PROTEIN: small nuclear
ribonucleoprotein-associated protein B-like [Prunus
mume]
Length = 257
Score = 91.7 bits (226), Expect = 5e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>NP_193777.1 small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana] NP_849414.1 small nuclear ribonucleoprotein
associated protein B [Arabidopsis thaliana]
NP_001031682.1 small nuclear ribonucleoprotein
associated protein B [Arabidopsis thaliana]
NP_001154258.1 small nuclear ribonucleoprotein
associated protein B [Arabidopsis thaliana]
NP_001329619.1 small nuclear ribonucleoprotein
associated protein B [Arabidopsis thaliana] CAB45810.1
putative snRNP protein [Arabidopsis thaliana] CAB79044.1
putative snRNP protein [Arabidopsis thaliana] AAO42236.1
putative snRNP protein [Arabidopsis thaliana] AAO50590.1
putative snRNP protein [Arabidopsis thaliana] BAH19715.1
AT4G20440 [Arabidopsis thaliana] AEE84330.1 small
nuclear ribonucleoprotein associated protein B
[Arabidopsis thaliana] AEE84331.1 small nuclear
ribonucleoprotein associated protein B [Arabidopsis
thaliana] AEE84332.1 small nuclear ribonucleoprotein
associated protein B [Arabidopsis thaliana] AEE84333.1
small nuclear ribonucleoprotein associated protein B
[Arabidopsis thaliana] OAP00808.1 smB [Arabidopsis
thaliana] ANM67817.1 small nuclear ribonucleoprotein
associated protein B [Arabidopsis thaliana]
Length = 257
Score = 91.7 bits (226), Expect = 5e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_002867880.1 hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
lyrata] EFH44139.1 hypothetical protein
ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata]
Length = 258
Score = 91.7 bits (226), Expect = 5e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_018446744.1 PREDICTED: small nuclear ribonucleoprotein-associated proteins B
and B' [Raphanus sativus]
Length = 259
Score = 91.7 bits (226), Expect = 6e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>JAU21035.1 Small nuclear ribonucleoprotein-associated protein B [Noccaea
caerulescens] JAU36796.1 Small nuclear
ribonucleoprotein-associated protein B [Noccaea
caerulescens] JAU72727.1 Small nuclear
ribonucleoprotein-associated protein B [Noccaea
caerulescens] JAU96031.1 Small nuclear
ribonucleoprotein-associated protein B [Noccaea
caerulescens]
Length = 260
Score = 91.7 bits (226), Expect = 6e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_010449168.1 PREDICTED: small nuclear ribonucleoprotein-associated proteins B
and B'-like [Camelina sativa]
Length = 261
Score = 91.7 bits (226), Expect = 6e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_010439573.1 PREDICTED: small nuclear ribonucleoprotein-associated proteins B
and B' [Camelina sativa]
Length = 261
Score = 91.7 bits (226), Expect = 6e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_006413865.1 hypothetical protein EUTSA_v10026002mg [Eutrema salsugineum]
ESQ55318.1 hypothetical protein EUTSA_v10026002mg
[Eutrema salsugineum]
Length = 263
Score = 91.7 bits (226), Expect = 6e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_004298981.1 PREDICTED: small nuclear ribonucleoprotein-associated protein B'
[Fragaria vesca subsp. vesca]
Length = 263
Score = 91.7 bits (226), Expect = 6e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_013596195.1 PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like [Brassica oleracea var. oleracea]
Length = 250
Score = 91.3 bits (225), Expect = 7e-20
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQL+GKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_007207298.1 hypothetical protein PRUPE_ppa015979mg [Prunus persica] ONI04836.1
hypothetical protein PRUPE_6G342400 [Prunus persica]
Length = 270
Score = 91.7 bits (226), Expect = 7e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_010537351.1 PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like [Tarenaya hassleriana]
Length = 271
Score = 91.7 bits (226), Expect = 7e-20
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQLVGKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP 53
>BAD43836.1 unknown protein [Arabidopsis thaliana]
Length = 254
Score = 91.3 bits (225), Expect = 7e-20
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQL+GKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPP 53
>NP_199263.1 Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana] NP_001032011.1 Small nuclear ribonucleoprotein
family protein [Arabidopsis thaliana] BAB09157.1 unnamed
protein product [Arabidopsis thaliana] AAK68796.1
Unknown protein [Arabidopsis thaliana] AAL66885.1
unknown protein [Arabidopsis thaliana] BAD44612.1
unknown protein [Arabidopsis thaliana] BAD95039.1
hypothetical protein [Arabidopsis thaliana] AED95116.1
Small nuclear ribonucleoprotein family protein
[Arabidopsis thaliana] AED95117.1 Small nuclear
ribonucleoprotein family protein [Arabidopsis thaliana]
OAO95911.1 hypothetical protein AXX17_AT5G42630
[Arabidopsis thaliana]
Length = 254
Score = 91.3 bits (225), Expect = 7e-20
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQL+GKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPP 53
>AAM61039.1 putative snRNP protein [Arabidopsis thaliana]
Length = 254
Score = 91.3 bits (225), Expect = 7e-20
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQL+GKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPP 53
>XP_002865361.1 hypothetical protein ARALYDRAFT_494537 [Arabidopsis lyrata subsp.
lyrata] EFH41620.1 hypothetical protein
ARALYDRAFT_494537 [Arabidopsis lyrata subsp. lyrata]
Length = 256
Score = 91.3 bits (225), Expect = 7e-20
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = -1
Query: 184 LLQFINYRIRVTIQDGRQLVGKFTAFDRHMNLVLGDCEEFRKLPP 50
+LQFINYR+RVTIQDGRQL+GKF AFDRHMNLVLGDCEEFRKLPP
Sbjct: 9 MLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPP 53