BLASTX nr result

ID: Angelica27_contig00038551 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00038551
         (267 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017247066.1 PREDICTED: RNA polymerase II C-terminal domain ph...    72   1e-12
XP_017247064.1 PREDICTED: RNA polymerase II C-terminal domain ph...    72   1e-12
XP_017247063.1 PREDICTED: RNA polymerase II C-terminal domain ph...    72   1e-12
KZM97208.1 hypothetical protein DCAR_015430 [Daucus carota subsp...    72   1e-12
XP_017247062.1 PREDICTED: RNA polymerase II C-terminal domain ph...    72   1e-12

>XP_017247066.1 PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X4 [Daucus carota subsp. sativus]
          Length = 589

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 39/88 (44%), Positives = 51/88 (57%)
 Frame = -2

Query: 266 VDVQATNFKFPNNEIIIDHLSLKSNRCXXXXXXXXXXXXXVLCKLESSDEHSELYDMYID 87
           V V+ +NF+FPNNEI I  LS KSNRC             VLCKLE+ D++S+L+ +YID
Sbjct: 23  VAVEGSNFEFPNNEIRIHCLSPKSNRCSPHSVAHMIASSPVLCKLEAEDKYSDLFSLYID 82

Query: 86  CIKXXXXXXXXXXXXXXXXVAMVSKYRN 3
           CI+                VAMV+KY+N
Sbjct: 83  CIRDRQTGVVLLGEEELHLVAMVNKYKN 110


>XP_017247064.1 PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X3 [Daucus carota subsp. sativus]
          Length = 591

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 39/88 (44%), Positives = 51/88 (57%)
 Frame = -2

Query: 266 VDVQATNFKFPNNEIIIDHLSLKSNRCXXXXXXXXXXXXXVLCKLESSDEHSELYDMYID 87
           V V+ +NF+FPNNEI I  LS KSNRC             VLCKLE+ D++S+L+ +YID
Sbjct: 23  VAVEGSNFEFPNNEIRIHCLSPKSNRCSPHSVAHMIASSPVLCKLEAEDKYSDLFSLYID 82

Query: 86  CIKXXXXXXXXXXXXXXXXVAMVSKYRN 3
           CI+                VAMV+KY+N
Sbjct: 83  CIRDRQTGVVLLGEEELHLVAMVNKYKN 110


>XP_017247063.1 PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X2 [Daucus carota subsp. sativus]
          Length = 622

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 39/88 (44%), Positives = 51/88 (57%)
 Frame = -2

Query: 266 VDVQATNFKFPNNEIIIDHLSLKSNRCXXXXXXXXXXXXXVLCKLESSDEHSELYDMYID 87
           V V+ +NF+FPNNEI I  LS KSNRC             VLCKLE+ D++S+L+ +YID
Sbjct: 23  VAVEGSNFEFPNNEIRIHCLSPKSNRCSPHSVAHMIASSPVLCKLEAEDKYSDLFSLYID 82

Query: 86  CIKXXXXXXXXXXXXXXXXVAMVSKYRN 3
           CI+                VAMV+KY+N
Sbjct: 83  CIRDRQTGVVLLGEEELHLVAMVNKYKN 110


>KZM97208.1 hypothetical protein DCAR_015430 [Daucus carota subsp. sativus]
          Length = 622

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 39/88 (44%), Positives = 51/88 (57%)
 Frame = -2

Query: 266 VDVQATNFKFPNNEIIIDHLSLKSNRCXXXXXXXXXXXXXVLCKLESSDEHSELYDMYID 87
           V V+ +NF+FPNNEI I  LS KSNRC             VLCKLE+ D++S+L+ +YID
Sbjct: 23  VAVEGSNFEFPNNEIRIHCLSPKSNRCSPHSVAHMIASSPVLCKLEAEDKYSDLFSLYID 82

Query: 86  CIKXXXXXXXXXXXXXXXXVAMVSKYRN 3
           CI+                VAMV+KY+N
Sbjct: 83  CIRDRQTGVVLLGEEELHLVAMVNKYKN 110


>XP_017247062.1 PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
           isoform X1 [Daucus carota subsp. sativus]
          Length = 640

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 39/88 (44%), Positives = 51/88 (57%)
 Frame = -2

Query: 266 VDVQATNFKFPNNEIIIDHLSLKSNRCXXXXXXXXXXXXXVLCKLESSDEHSELYDMYID 87
           V V+ +NF+FPNNEI I  LS KSNRC             VLCKLE+ D++S+L+ +YID
Sbjct: 23  VAVEGSNFEFPNNEIRIHCLSPKSNRCSPHSVAHMIASSPVLCKLEAEDKYSDLFSLYID 82

Query: 86  CIKXXXXXXXXXXXXXXXXVAMVSKYRN 3
           CI+                VAMV+KY+N
Sbjct: 83  CIRDRQTGVVLLGEEELHLVAMVNKYKN 110


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