BLASTX nr result
ID: Angelica27_contig00037462
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica27_contig00037462
(350 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OIT30292.1 hypothetical protein A4A49_38570 [Nicotiana attenuata] 64 2e-16
OIT20602.1 hypothetical protein A4A49_37387 [Nicotiana attenuata] 59 3e-15
KYP42262.1 Retrovirus-related Pol polyprotein from transposon TN... 64 2e-13
BAA22288.1 polyprotein [Oryza australiensis] 56 3e-13
XP_020081861.1 uncharacterized protein LOC109705542 [Ananas como... 57 6e-13
KYP48511.1 Retrovirus-related Pol polyprotein from transposon TN... 60 1e-12
OIT02019.1 hypothetical protein A4A49_56653, partial [Nicotiana ... 49 6e-11
XP_009590930.1 PREDICTED: uncharacterized protein LOC104088033 [... 48 6e-11
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 45 6e-10
XP_009783151.1 PREDICTED: uncharacterized protein LOC104231796, ... 48 6e-10
OIT04510.1 hypothetical protein A4A49_24093 [Nicotiana attenuata] 47 2e-09
OAP03954.1 hypothetical protein AXX17_AT3G36890 [Arabidopsis tha... 60 2e-08
AAD17357.1 contains similarity to retrovirus-related polyprotein... 59 1e-07
GAV90310.1 hypothetical protein CFOL_v3_33719, partial [Cephalot... 43 9e-07
CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group] 55 2e-06
AAX95363.1 Integrase core domain, putative [Oryza sativa Japonic... 46 3e-06
ABA98016.1 retrotransposon protein, putative, Ty1-copia subclass... 48 5e-06
GAV64069.1 zf-CCHC domain-containing protein, partial [Cephalotu... 46 5e-06
XP_018626184.1 PREDICTED: uncharacterized protein LOC104095845 [... 51 5e-06
AAS98437.1 putative polyprotein [Oryza sativa Japonica Group] 45 8e-06
>OIT30292.1 hypothetical protein A4A49_38570 [Nicotiana attenuata]
Length = 406
Score = 63.9 bits (154), Expect(2) = 2e-16
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPMLD 342
SR L++ EV L++GNGA+ GS L MPTGK ++L++CY+VP V NIIS MLD
Sbjct: 186 SRRLKKGEVNLQVGNGAKVAAVAVGSISLIMPTGKVLMLDDCYYVPKFVSNIISASMLD 244
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = +3
Query: 45 AVCFHYDKVGHWKRNCKVYLAELKNKKGSE 134
A CFH K GHWKRNCK YLA LK+KK E
Sbjct: 118 AECFHCKKKGHWKRNCKEYLATLKDKKQGE 147
>OIT20602.1 hypothetical protein A4A49_37387 [Nicotiana attenuata]
Length = 524
Score = 59.3 bits (142), Expect(2) = 3e-15
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPMLD 342
SR L++ EV L++GNGA+ GS L +PT K ++L++CY+VP V NIIS MLD
Sbjct: 217 SRRLKKGEVNLQVGNGAKVAAVAIGSISLIIPTSKVLMLDDCYYVPKFVSNIISAYMLD 275
Score = 49.7 bits (117), Expect(2) = 3e-15
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = +3
Query: 45 AVCFHYDKVGHWKRNCKVYLAELKNKKGSE 134
A CFHY K GHWK NCK Y A LK+KK SE
Sbjct: 149 AECFHYKKKGHWKGNCKEYFATLKDKKQSE 178
>KYP42262.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 656
Score = 64.3 bits (155), Expect(2) = 2e-13
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPMLD 342
+R L++ EV L++GNG GS L MPTGK +VL+NCY++P V NIISI MLD
Sbjct: 246 TRRLKKGEVNLQVGNGENVAALALGSVSLIMPTGKVLVLDNCYYIPKFVSNIISISMLD 304
Score = 38.5 bits (88), Expect(2) = 2e-13
Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELK-NKKG 128
CF+ + GHWKRNCK Y+ LK NK+G
Sbjct: 180 CFYCKQKGHWKRNCKKYIDSLKENKQG 206
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 55.8 bits (133), Expect(2) = 3e-13
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPML 339
SR L EV LR+GNGA G+ LH+P+G + LNNCY VP++ +N+IS L
Sbjct: 322 SRGLRRGEVNLRVGNGASVATVAVGTVPLHLPSGLVLELNNCYCVPTLCQNVISASCL 379
Score = 46.2 bits (108), Expect(2) = 3e-13
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +3
Query: 45 AVCFHYDKVGHWKRNCKVYLAELKNKKGSEIAASG 149
AVCF+ + GHWKRNCK Y+ +LK KK S +ASG
Sbjct: 253 AVCFYCKETGHWKRNCKKYMEDLK-KKQSTTSASG 286
>XP_020081861.1 uncharacterized protein LOC109705542 [Ananas comosus]
Length = 434
Score = 57.0 bits (136), Expect(2) = 6e-13
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIIS 327
SR L E EV LR+GNGAR G++ L +P+G ++L +CY+VP RN+IS
Sbjct: 125 SRGLREGEVTLRVGNGARVAAVAAGTYSLRLPSGYVLLLKDCYYVPPASRNLIS 178
Score = 43.9 bits (102), Expect(2) = 6e-13
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELKNKK 125
CFH + GHWKRNC VYL LKNK+
Sbjct: 84 CFHCNVDGHWKRNCPVYLESLKNKR 108
>KYP48511.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 422
Score = 59.7 bits (143), Expect(2) = 1e-12
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPML 339
+R L++ EV L++GNG GS L MPTGK +VL+NCY++ + V NIISI ML
Sbjct: 246 TRRLKKGEVSLQVGNGENVVALALGSVSLIMPTGKVLVLDNCYYISTFVSNIISISML 303
Score = 40.0 bits (92), Expect(2) = 1e-12
Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 45 AVCFHYDKVGHWKRNCKVYLAELK-NKKG 128
A CF+ + GHWKRNCK YL LK NK+G
Sbjct: 178 AECFYCKQKGHWKRNCKKYLDSLKENKQG 206
>OIT02019.1 hypothetical protein A4A49_56653, partial [Nicotiana attenuata]
Length = 259
Score = 48.9 bits (115), Expect(2) = 6e-11
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = +3
Query: 45 AVCFHYDKVGHWKRNCKVYLAELKNKKGSE 134
A CFH K GHWKRNCK YLA LK+KK E
Sbjct: 149 AECFHCKKKGHWKRNCKEYLATLKDKKQGE 178
Score = 45.4 bits (106), Expect(2) = 6e-11
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCY 294
SR L++ EV L++GNGA+ GS L MPTGK ++L++CY
Sbjct: 217 SRRLKKGEVNLQVGNGAKVAAVAVGSISLIMPTGKVLMLDDCY 259
>XP_009590930.1 PREDICTED: uncharacterized protein LOC104088033 [Nicotiana
tomentosiformis]
Length = 155
Score = 47.8 bits (112), Expect(2) = 6e-11
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPMLD 342
SR L++ E+ L++GNG + GS L MP+GK +L++ ++VP NI S +LD
Sbjct: 95 SRRLKKGEINLQVGNGEKVAAIAVGSISLIMPSGKVFMLDDWFYVPKFASNINSASILD 153
Score = 46.6 bits (109), Expect(2) = 6e-11
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELKNKKGSE 134
CFH K GHWKRNC YLA LK+KK +E
Sbjct: 29 CFHCKKKGHWKRNCNEYLATLKDKKQAE 56
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 45.4 bits (106), Expect(2) = 6e-10
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELKNKKGSEIAASG 149
CF+ + GHWKRNCK YLA+LK G++ + SG
Sbjct: 342 CFYCKEPGHWKRNCKKYLADLKKNGGTKPSTSG 374
Score = 45.4 bits (106), Expect(2) = 6e-10
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPML 339
+R + E+ LR+GN A+ + L +P+G + LNNCY+VP++ RNIIS L
Sbjct: 410 NRRVARGEMDLRVGNKAKVAALSAETLPLVLPSGFIMELNNCYYVPAMSRNIISASCL 467
>XP_009783151.1 PREDICTED: uncharacterized protein LOC104231796, partial [Nicotiana
sylvestris]
Length = 173
Score = 48.1 bits (113), Expect(2) = 6e-10
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPMLD 342
S L++ E+ L++GNGA+ GS L M +GK ++L++ Y+V V NIIS MLD
Sbjct: 105 STRLKKGEINLQVGNGAKVAAVAVGSISLLMLSGKVLMLDDYYYVHKFVSNIISASMLD 163
Score = 42.7 bits (99), Expect(2) = 6e-10
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELKNKK 125
CFH K G+WKRNCK YL LK+KK
Sbjct: 75 CFHCKKKGYWKRNCKEYLETLKDKK 99
>OIT04510.1 hypothetical protein A4A49_24093 [Nicotiana attenuata]
Length = 259
Score = 46.6 bits (109), Expect(2) = 2e-09
Identities = 20/28 (71%), Positives = 20/28 (71%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELKNKKGSE 134
CFH K GHWKRNCK YLA LK KK E
Sbjct: 151 CFHCKKKGHWKRNCKEYLATLKVKKQGE 178
Score = 42.4 bits (98), Expect(2) = 2e-09
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCY 294
SR L++ EV L++ NGA+ GS L MPTGK ++L++CY
Sbjct: 217 SRRLKKGEVNLQVENGAKVADVDVGSISLIMPTGKVLMLDDCY 259
>OAP03954.1 hypothetical protein AXX17_AT3G36890 [Arabidopsis thaliana]
Length = 370
Score = 60.5 bits (145), Expect = 2e-08
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPMLDL 345
SRTLEE +V LR+ NGA+ G++ L +P+ + L NCY+VP+I +NIIS+ LD+
Sbjct: 79 SRTLEEGQVDLRVANGAKVSALAVGTYSLSLPSCMVLELKNCYYVPAINKNIISVSCLDM 138
>AAD17357.1 contains similarity to retrovirus-related polyproteins [Arabidopsis
thaliana] CAB77943.1 putative transposon protein
[Arabidopsis thaliana]
Length = 769
Score = 58.5 bits (140), Expect = 1e-07
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPMLDL 345
S T+EE +V LRM NGAR G++ L P+G + L NCY+V +I +NIIS+ LD+
Sbjct: 79 SITMEEGQVDLRMANGARVSTLVVGTYSLSFPSGMVLELKNCYYVHAINKNIISVSCLDM 138
>GAV90310.1 hypothetical protein CFOL_v3_33719, partial [Cephalotus
follicularis]
Length = 175
Score = 43.1 bits (100), Expect(2) = 9e-07
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELKNK 122
CFH K G WK+NCKVYLA LK+K
Sbjct: 79 CFHCGKDGQWKKNCKVYLASLKDK 102
Score = 37.0 bits (84), Expect(2) = 9e-07
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 169 RTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVP 303
R L + EV LR+G+GAR G+ L + +G+ + L C++VP
Sbjct: 131 RKLSKGEVDLRVGDGARVVALAVGTVHLPLSSGRVLELKYCFYVP 175
>CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 55.5 bits (132), Expect = 2e-06
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPML 339
SR+L EV +R+GNGAR G+ L +P+G + LNNCY +P++ +N+IS L
Sbjct: 281 SRSLARGEVDIRVGNGARVAVVAVGTMSLSLPSGLVLELNNCYCIPALCKNVISASCL 338
>AAX95363.1 Integrase core domain, putative [Oryza sativa Japonica Group]
ABA95470.1 retrotransposon protein, putative, Ty1-copia
subclass, expressed [Oryza sativa Japonica Group]
Length = 999
Score = 46.2 bits (108), Expect(2) = 3e-06
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 169 RTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPMLD 342
RT + E +R+ NG G L + G T++L N ++VPS RN+IS+ LD
Sbjct: 254 RTTQRSESSIRVANGVEEKVDAVGDLSLELANGFTLLLRNVFYVPSFQRNLISVSKLD 311
Score = 32.0 bits (71), Expect(2) = 3e-06
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELKNKKGSEI 137
C H K GH+K++C +L + KKG I
Sbjct: 188 CLHCKKTGHYKKDCPDFLKMIMAKKGKNI 216
>ABA98016.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1014
Score = 48.1 bits (113), Expect(2) = 5e-06
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPMLD 342
+RT++ E +R+ NG G L + G T++L N ++VPS+ RN+IS+ LD
Sbjct: 341 TRTMQRSESSIRVANGVEEKVEAVGDLPLELANGFTLLLRNVFYVPSLQRNLISVSKLD 399
Score = 29.3 bits (64), Expect(2) = 5e-06
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELKNKKGSEI 137
C H K+GH+K++C +L + +K I
Sbjct: 276 CLHCKKIGHYKKDCPDFLKMIMARKDENI 304
>GAV64069.1 zf-CCHC domain-containing protein, partial [Cephalotus
follicularis]
Length = 239
Score = 46.2 bits (108), Expect(2) = 5e-06
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +1
Query: 169 RTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPML 339
R ++ LR+GNG+R G D+ + G + L+ CYF+ ++VRNIIS+ L
Sbjct: 147 RKFRAGDLDLRLGNGSRIIAEAVGMCDVTLSNGYVLTLDPCYFISNVVRNIISVSYL 203
Score = 31.2 bits (69), Expect(2) = 5e-06
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELK---NKKGSEIAASGSGT 158
CF K GHWK++C +++ E+ N S + +G GT
Sbjct: 97 CFQCGKTGHWKKDC-MFMIEINLALNSSSSWVLDTGCGT 134
>XP_018626184.1 PREDICTED: uncharacterized protein LOC104095845 [Nicotiana
tomentosiformis]
Length = 106
Score = 51.2 bits (121), Expect = 5e-06
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +3
Query: 45 AVCFHYDKVGHWKRNCKVYLAELKNKK 125
A CFHY K+GHWKRNCK YLA L +KK
Sbjct: 74 AECFHYKKIGHWKRNCKEYLATLNDKK 100
>AAS98437.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1362
Score = 44.7 bits (104), Expect(2) = 8e-06
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +1
Query: 166 SRTLEEEEVILRMGNGARXXXXXXGSFDLHMPTGKTIVLNNCYFVPSIVRNIISIPMLD 342
+RT + E +R+ NG G L + G T++L + ++VPS+ RN+IS+ LD
Sbjct: 329 TRTTQGRESTIRVANGVEEKVEAVGDLPLELANGFTLLLRDVFYVPSLQRNLISVSKLD 387
Score = 32.0 bits (71), Expect(2) = 8e-06
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 51 CFHYDKVGHWKRNCKVYLAELKNKKGSEI 137
C H K GH+K++C +L + KKG I
Sbjct: 264 CLHCKKTGHYKKDCPDFLKMIMAKKGENI 292