BLASTX nr result

ID: Angelica27_contig00037210 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00037210
         (236 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN08103.1 hypothetical protein DCAR_000772 [Daucus carota subsp...    54   9e-07
XP_017251287.1 PREDICTED: zinc finger CCCH domain-containing pro...    53   3e-06

>KZN08103.1 hypothetical protein DCAR_000772 [Daucus carota subsp. sativus]
          Length = 324

 Score = 54.3 bits (129), Expect = 9e-07
 Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
 Frame = +1

Query: 13  GSTRQCSMLRPGFSGL*VAPTRKVDSVSL----MWNKLCGKRHLWRGWNLEGMSVQKMYA 180
           GS RQCS+LRPGFSGL V+PTRK+    L    +W +      +  G ++      KMYA
Sbjct: 241 GSGRQCSVLRPGFSGLSVSPTRKMTRSGLGELDLWGEEPAMERVESGRDVRA----KMYA 296

Query: 181 KLRKENSPD 207
           KL KENS D
Sbjct: 297 KLSKENSLD 305


>XP_017251287.1 PREDICTED: zinc finger CCCH domain-containing protein 23 [Daucus
           carota subsp. sativus] KZN11799.1 hypothetical protein
           DCAR_004455 [Daucus carota subsp. sativus]
          Length = 365

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
 Frame = +1

Query: 1   GCSFGSTRQCSMLRPGFSGL*VAPTRKVDSVSL----MWNKLCGKRHLWRGWNLEGMSVQ 168
           G S+GS RQCSM+RPGF  L   PTRK+    L    +W++ C +               
Sbjct: 280 GSSYGSPRQCSMIRPGFMSLPGTPTRKMTRSGLGGFDLWDQSCEEEPAMERVESGKDLRA 339

Query: 169 KMYAKLRKENS 201
           KMYAKL KENS
Sbjct: 340 KMYAKLSKENS 350


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