BLASTX nr result
ID: Angelica27_contig00037000
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica27_contig00037000
(554 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004515251.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 72 2e-12
JAU17285.1 Cold-inducible RNA-binding protein [Noccaea caerulesc... 70 1e-11
XP_013617250.1 PREDICTED: LOW QUALITY PROTEIN: cold-inducible RN... 68 2e-11
WP_038455672.1 RNA-binding protein [Campylobacter iguaniorum] 66 3e-11
JAU97829.1 Cold-inducible RNA-binding protein [Noccaea caerulesc... 69 3e-11
AII15103.1 RNA-binding protein [Campylobacter iguaniorum] ALV249... 66 3e-11
XP_018849099.1 PREDICTED: serine/arginine-rich splicing factor S... 69 3e-11
OGF98273.1 RNA-binding protein [Candidatus Glassbacteria bacteri... 67 3e-11
XP_009401002.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 68 4e-11
OGD25901.1 RNA-binding protein [Candidatus Aminicenantes bacteri... 66 4e-11
OGD12036.1 RNA-binding protein [Candidatus Aminicenantes bacteri... 66 7e-11
XP_010278062.1 PREDICTED: RNA-binding protein 1 [Nelumbo nucifera] 68 7e-11
XP_018443995.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 68 7e-11
JAU41115.1 Cold-inducible RNA-binding protein, partial [Noccaea ... 68 7e-11
XP_009102576.1 PREDICTED: 40S ribosomal protein S19, mitochondri... 68 8e-11
XP_006390546.1 hypothetical protein EUTSA_v10019191mg [Eutrema s... 68 8e-11
WP_034963851.1 RNA-binding protein [Campylobacter hyointestinali... 65 8e-11
WP_024305159.1 RNA-binding protein [Campylobacter fetus] KGT3659... 65 8e-11
ANE32882.1 RNA-binding protein [Campylobacter hyointestinalis su... 65 8e-11
ABK81725.1 RNA-binding region RNP-1 [Campylobacter fetus subsp. ... 65 8e-11
>XP_004515251.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Cicer
arietinum]
Length = 183
Score = 72.0 bits (175), Expect = 2e-12
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 16/112 (14%)
Frame = +3
Query: 15 FSFSNNQTDMALATRIRSMNNVFHQS-CRLM----------STQIYVGKLSPKTTEEELK 161
FS +NN T + +T S +++ ++S C ++ ST++YV LS +TTEE L+
Sbjct: 50 FSETNNTTTLFPSTLSSSSSSLRNKSSCSVLACLPSSSSSPSTKLYVSGLSFRTTEESLR 109
Query: 162 EAFERFGTITRSHIF-----TKPRGYGFVKFETEEEALKAIEGMKGKKLGYR 302
AF+ FG + ++ +PRG+GF+++ETEEE+ KAIEGM GK L R
Sbjct: 110 NAFKNFGQLVEVNLVMDKVANRPRGFGFLRYETEEESKKAIEGMHGKFLDGR 161
>JAU17285.1 Cold-inducible RNA-binding protein [Noccaea caerulescens]
Length = 192
Score = 70.1 bits (170), Expect = 1e-11
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Frame = +3
Query: 108 TQIYVGKLSPKTTEEELKEAFERFGTIT-----RSHIFTKPRGYGFVKFETEEEALKAIE 272
T++YV LS +TTE+ L+ AFE+FG +T + +PRG+ F+K+ETEEE++KAIE
Sbjct: 88 TKLYVSGLSFRTTEDNLRNAFEQFGKLTLVNLVMDKVANRPRGFAFLKYETEEESMKAIE 147
Query: 273 GMKGKKLGYR 302
GM GK L R
Sbjct: 148 GMHGKFLDGR 157
>XP_013617250.1 PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding protein,
partial [Brassica oleracea var. oleracea]
Length = 134
Score = 68.2 bits (165), Expect = 2e-11
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Frame = +3
Query: 105 STQIYVGKLSPKTTEEELKEAFERFGTIT-----RSHIFTKPRGYGFVKFETEEEALKAI 269
+T++YV LS +TTE+ L++AFE+FG +T + +PRG+ F+++ETEEE++KAI
Sbjct: 29 NTKLYVIGLSFRTTEDNLRKAFEQFGKLTLVNLVMDKVANRPRGFAFLRYETEEESMKAI 88
Query: 270 EGMKGKKLGYR 302
EGM GK L R
Sbjct: 89 EGMHGKFLDGR 99
>WP_038455672.1 RNA-binding protein [Campylobacter iguaniorum]
Length = 81
Score = 66.2 bits (160), Expect = 3e-11
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Frame = +3
Query: 114 IYVGKLSPKTTEEELKEAFERFGTITRSHIF-----TKPRGYGFVKFETEEEALKAIEGM 278
IYVG LS + TE EL+EAF FG +TR+ I + +G+GF++ ++ EA KAI+GM
Sbjct: 3 IYVGNLSYRMTEAELREAFSEFGEVTRAKIVKDKETNRSKGFGFIEMSSDAEAKKAIDGM 62
Query: 279 KGKKLGYRGRGPEVN 323
GK++G GR VN
Sbjct: 63 NGKEVG--GRALRVN 75
>JAU97829.1 Cold-inducible RNA-binding protein [Noccaea caerulescens]
Length = 187
Score = 68.9 bits (167), Expect = 3e-11
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Frame = +3
Query: 108 TQIYVGKLSPKTTEEELKEAFERFGTIT-----RSHIFTKPRGYGFVKFETEEEALKAIE 272
T++YV LS +TTE+ L+ AF++FG +T + +PRG+ F+K+ETEEE++KAIE
Sbjct: 83 TKLYVSGLSFRTTEDNLRNAFQQFGKLTLVNLVMDKVANRPRGFAFLKYETEEESMKAIE 142
Query: 273 GMKGKKLGYR 302
GM GK L R
Sbjct: 143 GMHGKFLDGR 152
>AII15103.1 RNA-binding protein [Campylobacter iguaniorum] ALV24970.1
RNA-binding protein [Campylobacter iguaniorum]
Length = 82
Score = 66.2 bits (160), Expect = 3e-11
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Frame = +3
Query: 114 IYVGKLSPKTTEEELKEAFERFGTITRSHIF-----TKPRGYGFVKFETEEEALKAIEGM 278
IYVG LS + TE EL+EAF FG +TR+ I + +G+GF++ ++ EA KAI+GM
Sbjct: 4 IYVGNLSYRMTEAELREAFSEFGEVTRAKIVKDKETNRSKGFGFIEMSSDAEAKKAIDGM 63
Query: 279 KGKKLGYRGRGPEVN 323
GK++G GR VN
Sbjct: 64 NGKEVG--GRALRVN 76
>XP_018849099.1 PREDICTED: serine/arginine-rich splicing factor SR45 isoform X5
[Juglans regia]
Length = 170
Score = 68.6 bits (166), Expect = 3e-11
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Frame = +3
Query: 30 NQTDMALATRIRSMNNVFHQSCRLMSTQIYVGKLSPKTTEEELKEAFERFGTITRSH--- 200
N LA S ++ + ST++YV LS +TTEE L++AFE FG + +
Sbjct: 68 NGASFVLACLPSSSSSSSSSAPNTSSTKLYVSGLSFRTTEESLRKAFENFGQLVEVNLVM 127
Query: 201 --IFTKPRGYGFVKFETEEEALKAIEGMKGKKLGYRGRGP 314
I +PRG+ F+++ TEEE+ KAIEGM GK++ GP
Sbjct: 128 DKIANRPRGFAFIRYVTEEESQKAIEGMHGKEIDAICLGP 167
>OGF98273.1 RNA-binding protein [Candidatus Glassbacteria bacterium GWA2_58_10]
Length = 115
Score = 67.0 bits (162), Expect = 3e-11
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Frame = +3
Query: 114 IYVGKLSPKTTEEELKEAFERFGTITRSHIFT-----KPRGYGFVKFETEEEALKAIEGM 278
IY G LS +TTEEEL+EAFE FG +T ++I + RG+GFV+ T+ EA AI GM
Sbjct: 3 IYAGNLSSQTTEEELREAFEAFGQVTAANIIKDRYSGESRGFGFVEMPTKAEAEAAITGM 62
Query: 279 KGKKLG 296
GK+LG
Sbjct: 63 NGKELG 68
>XP_009401002.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 170
Score = 68.2 bits (165), Expect = 4e-11
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 8/105 (7%)
Frame = +3
Query: 12 FFSFSNNQTDMALATRIRSMNNVFHQSCRLM---STQIYVGKLSPKTTEEELKEAFERFG 182
F S ++++ A R + F SC L ST++YV LS +TTEE L+ AF+ FG
Sbjct: 40 FPSIRSSRSPWPSAATSRRRSGGFSVSCCLPPTPSTKLYVSGLSFRTTEESLRNAFQNFG 99
Query: 183 TITR-----SHIFTKPRGYGFVKFETEEEALKAIEGMKGKKLGYR 302
+ I +PRG+ F+++ TEEE+ KAIEGM GK L R
Sbjct: 100 QLVEVNLVMDRIANRPRGFAFLRYATEEESKKAIEGMHGKFLDGR 144
>OGD25901.1 RNA-binding protein [Candidatus Aminicenantes bacterium
RBG_19FT_COMBO_65_30]
Length = 99
Score = 66.2 bits (160), Expect = 4e-11
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Frame = +3
Query: 114 IYVGKLSPKTTEEELKEAFERFGTITRSHIFT-----KPRGYGFVKFETEEEALKAIEGM 278
IYVG LS TE++L+ AF+ FG + ++ I T +PRG+GFV+ +EA+KAIEG+
Sbjct: 3 IYVGNLSFTVTEDDLRGAFQAFGAVEKAAIITDKMSGQPRGFGFVEMPNRDEAVKAIEGL 62
Query: 279 KGKKLGYRGRGPEVN 323
GK L +GR +VN
Sbjct: 63 NGKDL--KGRNMKVN 75
>OGD12036.1 RNA-binding protein [Candidatus Aminicenantes bacterium
RBG_13_62_12]
Length = 102
Score = 65.9 bits (159), Expect = 7e-11
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 5/75 (6%)
Frame = +3
Query: 114 IYVGKLSPKTTEEELKEAFERFGTITRSHIFT-----KPRGYGFVKFETEEEALKAIEGM 278
IYVG LS TE++L++AF+ FG + ++ I T +PRG+GFV+ ++EA+KAI G+
Sbjct: 3 IYVGNLSFTVTEDDLRQAFQAFGAVEKAAIITDKMSGQPRGFGFVEMPNKDEAVKAISGL 62
Query: 279 KGKKLGYRGRGPEVN 323
GK L +GR +VN
Sbjct: 63 NGKDL--KGRNLKVN 75
>XP_010278062.1 PREDICTED: RNA-binding protein 1 [Nelumbo nucifera]
Length = 181
Score = 67.8 bits (164), Expect = 7e-11
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 13/97 (13%)
Frame = +3
Query: 51 ATRIRSMNNVFHQSC--------RLMSTQIYVGKLSPKTTEEELKEAFERFGTITRSHIF 206
ATR+R N + C +ST++YV LS +TTEE L+ AF+ FG + ++
Sbjct: 55 ATRLRHQNGIRIVGCLPSSPENTTTVSTKLYVSGLSFRTTEESLRNAFKNFGQLIEVNLV 114
Query: 207 -----TKPRGYGFVKFETEEEALKAIEGMKGKKLGYR 302
+PRG+ F+++ TEEE+ KAIEGM GK L R
Sbjct: 115 MDRRANRPRGFAFLRYATEEESKKAIEGMHGKFLDGR 151
>XP_018443995.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Raphanus sativus]
Length = 183
Score = 67.8 bits (164), Expect = 7e-11
Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Frame = +3
Query: 108 TQIYVGKLSPKTTEEELKEAFERFGTIT-----RSHIFTKPRGYGFVKFETEEEALKAIE 272
T++YV LS +TTE+ L+ AFE+FG +T + +PRG+ F+++ETEEE++KAI+
Sbjct: 79 TKLYVSGLSFRTTEDNLRNAFEQFGKLTLVNLVMDKVANRPRGFAFLRYETEEESMKAIQ 138
Query: 273 GMKGKKLGYR 302
GM GK L R
Sbjct: 139 GMHGKFLDGR 148
>JAU41115.1 Cold-inducible RNA-binding protein, partial [Noccaea caerulescens]
Length = 205
Score = 68.2 bits (165), Expect = 7e-11
Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Frame = +3
Query: 111 QIYVGKLSPKTTEEELKEAFERFGTIT-----RSHIFTKPRGYGFVKFETEEEALKAIEG 275
++YV LS +TTE+ L+ AFE+FG +T + +PRG+ F+K+ETEEE++KAIEG
Sbjct: 102 KLYVSGLSFRTTEDNLRNAFEQFGKLTLVNLVMDKVANRPRGFAFLKYETEEESMKAIEG 161
Query: 276 MKGKKLGYR 302
M GK L R
Sbjct: 162 MHGKFLDGR 170
>XP_009102576.1 PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Brassica
rapa]
Length = 206
Score = 68.2 bits (165), Expect = 8e-11
Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Frame = +3
Query: 42 MALATRIRSMNN---VFHQSCRLMSTQIYVGKLSPKTTEEELKEAFERFGTITRSHIFT- 209
MA+ TR R + N R MST++++G LSP T + LK+AF F +T + + T
Sbjct: 1 MAVCTRFRVLQNRNVAVTSMLRYMSTKLFIGGLSPGTDDNSLKDAFSTFNGVTEARVMTN 60
Query: 210 ----KPRGYGFVKFETEEEALKAIEGMKGKKLGYRGRGPEVNVQLCKN-PTAEKSSTDTT 374
+ RGYGFV F +EE A AI M G++L G + V K P+ S + T
Sbjct: 61 KVTGRSRGYGFVNFTSEESAKSAISAMDGQEL----NGCNIRVDAAKEWPSLPLSLDEGT 116
Query: 375 HTE 383
E
Sbjct: 117 EDE 119
>XP_006390546.1 hypothetical protein EUTSA_v10019191mg [Eutrema salsugineum]
ESQ27832.1 hypothetical protein EUTSA_v10019191mg
[Eutrema salsugineum]
Length = 187
Score = 67.8 bits (164), Expect = 8e-11
Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Frame = +3
Query: 108 TQIYVGKLSPKTTEEELKEAFERFG-----TITRSHIFTKPRGYGFVKFETEEEALKAIE 272
T++YV LS +TTE+ L++AFE+FG + + +PRG+ F+++ETEEE++KAIE
Sbjct: 82 TKLYVSGLSFRTTEDNLRKAFEQFGKLVFVNLVMDKVANRPRGFAFLRYETEEESMKAIE 141
Query: 273 GMKGKKLGYR 302
GM GK L R
Sbjct: 142 GMHGKFLDGR 151
>WP_034963851.1 RNA-binding protein [Campylobacter hyointestinalis] KEA43717.1
RNA-binding protein [Campylobacter hyointestinalis
subsp. hyointestinalis]
Length = 81
Score = 65.1 bits (157), Expect = 8e-11
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Frame = +3
Query: 114 IYVGKLSPKTTEEELKEAFERFGTITRSHIF-----TKPRGYGFVKFETEEEALKAIEGM 278
IYVG LS + +E EL+EAF FG +TR+ I + +G+GFV+ T+ EA KAIE M
Sbjct: 3 IYVGNLSYRMSEAELREAFSEFGEVTRAKIVKDKETNRSKGFGFVEMSTDAEAKKAIEAM 62
Query: 279 KGKKLGYRGRGPEVN 323
GK +G GR VN
Sbjct: 63 NGKDIG--GRALRVN 75
>WP_024305159.1 RNA-binding protein [Campylobacter fetus] KGT36597.1 RNA-binding
protein [Campylobacter fetus] OCS15797.1 RNA-binding
protein [Campylobacter fetus subsp. venerealis]
OCS17873.1 RNA-binding protein [Campylobacter fetus
subsp. fetus] OCS19587.1 RNA-binding protein
[Campylobacter fetus subsp. fetus BT 10/98] OCS20560.1
RNA-binding protein [Campylobacter fetus subsp.
venerealis cfvi03/596] OCS22872.1 RNA-binding protein
[Campylobacter fetus subsp. venerealis cfvi97/532]
OCS23955.1 RNA-binding protein [Campylobacter fetus
subsp. venerealis cfvi9825] OCS26030.1 RNA-binding
protein [Campylobacter fetus subsp. venerealis cfvB10]
OCS26665.1 RNA-binding protein [Campylobacter fetus
subsp. venerealis CCUG 33872] OCS29360.1 RNA-binding
protein [Campylobacter fetus subsp. venerealis LMG 6570
= CCUG 33900] OCS31324.1 RNA-binding protein
[Campylobacter fetus subsp. venerealis LMG 6570 = CCUG
33900] OCS33611.1 RNA-binding protein [Campylobacter
fetus subsp. venerealis] OCS33879.1 RNA-binding protein
[Campylobacter fetus subsp. venerealis] OCS34266.1
RNA-binding protein [Campylobacter fetus subsp.
venerealis] OCS38572.1 RNA-binding protein
[Campylobacter fetus subsp. venerealis] OCS40831.1
RNA-binding protein [Campylobacter fetus subsp.
venerealis cfvi92/203] OCS42330.1 RNA-binding protein
[Campylobacter fetus subsp. venerealis cfvi02/298]
OFI46572.1 RNA-binding protein [Campylobacter fetus
subsp. fetus]
Length = 81
Score = 65.1 bits (157), Expect = 8e-11
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Frame = +3
Query: 114 IYVGKLSPKTTEEELKEAFERFGTITRSHIF-----TKPRGYGFVKFETEEEALKAIEGM 278
IYVG LS + TE EL+E F FG +TR+ I + +G+GFV+ ++E+A KAIEG
Sbjct: 3 IYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEGT 62
Query: 279 KGKKLGYRGRGPEVN 323
GK++G GR VN
Sbjct: 63 NGKEVG--GRALRVN 75
>ANE32882.1 RNA-binding protein [Campylobacter hyointestinalis subsp.
hyointestinalis LMG 9260] SFT69456.1 RNA recognition
motif. (a.k.a. RRM, RBD, or RNP domain) [Campylobacter
hyointestinalis]
Length = 82
Score = 65.1 bits (157), Expect = 8e-11
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Frame = +3
Query: 114 IYVGKLSPKTTEEELKEAFERFGTITRSHIF-----TKPRGYGFVKFETEEEALKAIEGM 278
IYVG LS + +E EL+EAF FG +TR+ I + +G+GFV+ T+ EA KAIE M
Sbjct: 4 IYVGNLSYRMSEAELREAFSEFGEVTRAKIVKDKETNRSKGFGFVEMSTDAEAKKAIEAM 63
Query: 279 KGKKLGYRGRGPEVN 323
GK +G GR VN
Sbjct: 64 NGKDIG--GRALRVN 76
>ABK81725.1 RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
EGU24328.1 RNA-binding region RNP-1 [Campylobacter fetus
subsp. venerealis NCTC 10354] AHE94592.1 RNA-binding
protein [Campylobacter fetus subsp. venerealis
cfvi03/293] AIR79154.2 RNA-binding protein
[Campylobacter fetus subsp. fetus 04/554] AIR81007.2
RNA-binding protein [Campylobacter fetus subsp.
venerealis 97/608]
Length = 82
Score = 65.1 bits (157), Expect = 8e-11
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Frame = +3
Query: 114 IYVGKLSPKTTEEELKEAFERFGTITRSHIF-----TKPRGYGFVKFETEEEALKAIEGM 278
IYVG LS + TE EL+E F FG +TR+ I + +G+GFV+ ++E+A KAIEG
Sbjct: 4 IYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEGT 63
Query: 279 KGKKLGYRGRGPEVN 323
GK++G GR VN
Sbjct: 64 NGKEVG--GRALRVN 76