BLASTX nr result

ID: Angelica27_contig00036953 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00036953
         (244 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017234756.1 PREDICTED: DExH-box ATP-dependent RNA helicase DE...    46   1e-07
KZN05795.1 hypothetical protein DCAR_006632 [Daucus carota subsp...    46   1e-07

>XP_017234756.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH3 isoform X1
           [Daucus carota subsp. sativus] XP_017234757.1 PREDICTED:
           DExH-box ATP-dependent RNA helicase DExH3 isoform X2
           [Daucus carota subsp. sativus]
          Length = 1156

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = -1

Query: 178 IFDNPTSSLYNPMCLFAGISFLGDRSFSGHA 86
           +F  PTS LY+P CLFAGI+ LG R+FSG+A
Sbjct: 37  LFKLPTSPLYSPSCLFAGIALLGRRNFSGYA 67



 Score = 37.4 bits (85), Expect(2) = 1e-07
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 83  EQFSDDEYGCDYENHP 36
           EQFSDDEY CD+ENHP
Sbjct: 69  EQFSDDEYECDHENHP 84


>KZN05795.1 hypothetical protein DCAR_006632 [Daucus carota subsp. sativus]
          Length = 1154

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 20/31 (64%), Positives = 25/31 (80%)
 Frame = -1

Query: 178 IFDNPTSSLYNPMCLFAGISFLGDRSFSGHA 86
           +F  PTS LY+P CLFAGI+ LG R+FSG+A
Sbjct: 37  LFKLPTSPLYSPSCLFAGIALLGRRNFSGYA 67



 Score = 37.4 bits (85), Expect(2) = 1e-07
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -3

Query: 83  EQFSDDEYGCDYENHP 36
           EQFSDDEY CD+ENHP
Sbjct: 69  EQFSDDEYECDHENHP 84


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