BLASTX nr result

ID: Angelica27_contig00036890 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00036890
         (372 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017251148.1 PREDICTED: F-box protein FBW2-like [Daucus carota...    98   4e-22
CDP01093.1 unnamed protein product [Coffea canephora]                  66   3e-10
XP_019152854.1 PREDICTED: F-box protein FBW2-like [Ipomoea nil] ...    54   7e-06

>XP_017251148.1 PREDICTED: F-box protein FBW2-like [Daucus carota subsp. sativus]
           KZM95976.1 hypothetical protein DCAR_019218 [Daucus
           carota subsp. sativus]
          Length = 305

 Score = 97.8 bits (242), Expect = 4e-22
 Identities = 48/80 (60%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = -1

Query: 372 VKLDSKWLKDKFSKLTVLGPHVVDHLEKHCCWXXXXXXXXXXXXXXXXXXXEF-DDDGRL 196
           V LD+ WLKD+FSKL VLGPHV DHLE HCCW                   EF DDDG L
Sbjct: 226 VDLDNSWLKDEFSKLKVLGPHVADHLEIHCCWECEDSSYYSDSVYDYESWDEFDDDDGTL 285

Query: 195 EIILYEGQGEDSDHSWPPSP 136
           EIILYEGQGE+SD++WP SP
Sbjct: 286 EIILYEGQGENSDNAWPQSP 305


>CDP01093.1 unnamed protein product [Coffea canephora]
          Length = 313

 Score = 65.9 bits (159), Expect = 3e-10
 Identities = 35/79 (44%), Positives = 41/79 (51%)
 Frame = -1

Query: 372 VKLDSKWLKDKFSKLTVLGPHVVDHLEKHCCWXXXXXXXXXXXXXXXXXXXEFDDDGRLE 193
           VK D K+LKDKF KL VLGPHVVD  EK+  W                    +DD+  LE
Sbjct: 236 VKFDEKYLKDKFPKLNVLGPHVVDQYEKN-AWEDCSDYSDSLYDDYESSDGMWDDEESLE 294

Query: 192 IILYEGQGEDSDHSWPPSP 136
           +  Y G  E S + WPPSP
Sbjct: 295 LRFYGGYDEASVYGWPPSP 313


>XP_019152854.1 PREDICTED: F-box protein FBW2-like [Ipomoea nil] XP_019152855.1
           PREDICTED: F-box protein FBW2-like [Ipomoea nil]
           XP_019152856.1 PREDICTED: F-box protein FBW2-like
           [Ipomoea nil] XP_019152857.1 PREDICTED: F-box protein
           FBW2-like [Ipomoea nil]
          Length = 303

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = -1

Query: 372 VKLDSKWLKDKFSKLTVLGPHVVDHLEKHCCWXXXXXXXXXXXXXXXXXXXEFDDD---G 202
           VKLD ++LKDKF KL VLGP+VVD  E++                        DD+   G
Sbjct: 227 VKLDGEYLKDKFPKLKVLGPYVVDRYERN-----NDYEDWSDFSDSLYDYESSDDENRFG 281

Query: 201 RLEIILYEGQGEDSDHSWPPSP 136
            LE   Y+   ED+ + WPPSP
Sbjct: 282 ELEFRFYQQFNEDATNGWPPSP 303


Top