BLASTX nr result

ID: Angelica27_contig00036261 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00036261
         (461 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM84696.1 hypothetical protein DCAR_027882 [Daucus carota subsp...    70   3e-12
XP_017220379.1 PREDICTED: probable mediator of RNA polymerase II...    70   1e-11

>KZM84696.1 hypothetical protein DCAR_027882 [Daucus carota subsp. sativus]
          Length = 149

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 47/104 (45%), Positives = 59/104 (56%)
 Frame = -1

Query: 443 T*SASFKYVHQAEKGTGRKMFELNGDSRXXXXXXXXXXXXXXXXXDLTPRQNQKNSGTRK 264
           T  A   YV   EKGTGR+M E+ G+S                    T + ++K+S  RK
Sbjct: 37  TTDADLSYV---EKGTGRQMPEMCGNSTDKILENHKIRDKEKSKDH-TCQHHRKDSANRK 92

Query: 263 DDGKTSKGPHDIDPNNLQKLQDKKRKFEGGDYFSSIQKCQKIKV 132
           DD KT K   DI+ NNLQKLQDKKRKFEG D  SSIQ+ +K ++
Sbjct: 93  DDEKTRKSHRDINTNNLQKLQDKKRKFEGVD-ISSIQRGRKTEL 135


>XP_017220379.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 19b [Daucus carota subsp. sativus]
          Length = 212

 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 47/104 (45%), Positives = 59/104 (56%)
 Frame = -1

Query: 443 T*SASFKYVHQAEKGTGRKMFELNGDSRXXXXXXXXXXXXXXXXXDLTPRQNQKNSGTRK 264
           T  A   YV   EKGTGR+M E+ G+S                    T + ++K+S  RK
Sbjct: 100 TTDADLSYV---EKGTGRQMPEMCGNSTDKILENHKIRDKEKSKDH-TCQHHRKDSANRK 155

Query: 263 DDGKTSKGPHDIDPNNLQKLQDKKRKFEGGDYFSSIQKCQKIKV 132
           DD KT K   DI+ NNLQKLQDKKRKFEG D  SSIQ+ +K ++
Sbjct: 156 DDEKTRKSHRDINTNNLQKLQDKKRKFEGVD-ISSIQRGRKTEL 198


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