BLASTX nr result

ID: Angelica27_contig00034486 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00034486
         (268 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AIY60657.1 rhomboid protein Hedne_PARL [Hedera nepalensis]             65   3e-10
KZN02806.1 hypothetical protein DCAR_011562 [Daucus carota subsp...    55   5e-07
XP_017238650.1 PREDICTED: RHOMBOID-like protein 12, mitochondria...    55   5e-07

>AIY60657.1 rhomboid protein Hedne_PARL [Hedera nepalensis]
          Length = 325

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 46/93 (49%), Positives = 58/93 (62%), Gaps = 10/93 (10%)
 Frame = -1

Query: 265 MQRLLSLRLLSKN-----HSTNSFVSLAKT-----QKATDNLVSKYSTTALSGSWVKPHS 116
           MQRLLSL  +SKN     +S+NSF+S +KT     Q A  + +S Y+T  L  S  KP  
Sbjct: 1   MQRLLSL--VSKNPRNLSNSSNSFLSFSKTNPIQPQNAHGHFISHYTT--LLHSCPKPKK 56

Query: 115 GSCFLANPVLVNKFLQKSSALLKAPSKGLVDFK 17
              FL+NPVLV + L  S+ALLK PSKGL+D K
Sbjct: 57  FFGFLSNPVLVKQLLPNSNALLKGPSKGLLDIK 89


>KZN02806.1 hypothetical protein DCAR_011562 [Daucus carota subsp. sativus]
          Length = 282

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
 Frame = -1

Query: 265 MQRLLSLRLLSKNH-STN--SFVSLAKTQKATDNLVSKYSTTALSGSWVKPHSGSCFLAN 95
           MQRLL +RLL+K   STN   + S A      + +VS +STT         +SG  F   
Sbjct: 1   MQRLLCMRLLAKKKPSTNLPCYTSKANPIHPQNAMVSHFSTT---------NSGFNFYG- 50

Query: 94  PVLVNKFLQKSSALLKAPSKGLVDFKWVFSR 2
            +L N+F +KSSAL KAP++GLV FK VFSR
Sbjct: 51  -LLANQFSRKSSALFKAPAEGLVHFKRVFSR 80


>XP_017238650.1 PREDICTED: RHOMBOID-like protein 12, mitochondrial [Daucus carota
           subsp. sativus]
          Length = 311

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
 Frame = -1

Query: 265 MQRLLSLRLLSKNH-STN--SFVSLAKTQKATDNLVSKYSTTALSGSWVKPHSGSCFLAN 95
           MQRLL +RLL+K   STN   + S A      + +VS +STT         +SG  F   
Sbjct: 1   MQRLLCMRLLAKKKPSTNLPCYTSKANPIHPQNAMVSHFSTT---------NSGFNFYG- 50

Query: 94  PVLVNKFLQKSSALLKAPSKGLVDFKWVFSR 2
            +L N+F +KSSAL KAP++GLV FK VFSR
Sbjct: 51  -LLANQFSRKSSALFKAPAEGLVHFKRVFSR 80


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