BLASTX nr result

ID: Angelica27_contig00031676 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00031676
         (262 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017243193.1 PREDICTED: ribosomal RNA small subunit methyltran...    96   3e-22
XP_017243192.1 PREDICTED: ribosomal RNA small subunit methyltran...    96   1e-21

>XP_017243193.1 PREDICTED: ribosomal RNA small subunit methyltransferase I isoform
           X2 [Daucus carota subsp. sativus]
          Length = 273

 Score = 95.9 bits (237), Expect = 3e-22
 Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
 Frame = -3

Query: 209 LMRSFSCIIPQNIIFFTPKLTSIPTLFCMNTLSFFCSTSQNPKR--PISLQEQQPSSKKG 36
           LMRS SCI P+N IF  PKL   PTL+ +NTLSFFCST QNPK    ++ QEQQ  SKKG
Sbjct: 14  LMRSSSCIAPRNFIFLIPKLKPTPTLYHINTLSFFCSTPQNPKEHPHLTAQEQQSPSKKG 73

Query: 35  ILKPGLYLVGT 3
           ILKPGLYLVGT
Sbjct: 74  ILKPGLYLVGT 84


>XP_017243192.1 PREDICTED: ribosomal RNA small subunit methyltransferase I isoform
           X1 [Daucus carota subsp. sativus]
          Length = 365

 Score = 95.9 bits (237), Expect = 1e-21
 Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
 Frame = -3

Query: 209 LMRSFSCIIPQNIIFFTPKLTSIPTLFCMNTLSFFCSTSQNPKR--PISLQEQQPSSKKG 36
           LMRS SCI P+N IF  PKL   PTL+ +NTLSFFCST QNPK    ++ QEQQ  SKKG
Sbjct: 14  LMRSSSCIAPRNFIFLIPKLKPTPTLYHINTLSFFCSTPQNPKEHPHLTAQEQQSPSKKG 73

Query: 35  ILKPGLYLVGT 3
           ILKPGLYLVGT
Sbjct: 74  ILKPGLYLVGT 84


Top