BLASTX nr result

ID: Angelica27_contig00031368 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00031368
         (218 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017238569.1 PREDICTED: protein CUP-SHAPED COTYLEDON 3-like is...    69   2e-12
XP_017238562.1 PREDICTED: protein CUP-SHAPED COTYLEDON 3-like is...    69   2e-12
XP_017233836.1 PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [D...    60   5e-09

>XP_017238569.1 PREDICTED: protein CUP-SHAPED COTYLEDON 3-like isoform X2 [Daucus
           carota subsp. sativus] KZN08389.1 hypothetical protein
           DCAR_000935 [Daucus carota subsp. sativus]
          Length = 296

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 47/83 (56%), Positives = 53/83 (63%), Gaps = 12/83 (14%)
 Frame = -3

Query: 216 QHSNNLLQLPSLT-PNFLQXXXXXXXXXXXT---RVNDIMLLNTKRDDQDDYKFLF-DMN 52
           Q  N LLQ PSLT PNFLQ           T   RVNDIM +N+K +DQ+DYKFLF D+N
Sbjct: 214 QQPNTLLQFPSLTNPNFLQLSHHQPHTDTSTTLARVNDIMTVNSKCEDQNDYKFLFHDIN 273

Query: 51  FE-----DELDSNR--IMFDDCL 4
           FE     DELDS+   IMFDDCL
Sbjct: 274 FEDGNMVDELDSDMHGIMFDDCL 296


>XP_017238562.1 PREDICTED: protein CUP-SHAPED COTYLEDON 3-like isoform X1 [Daucus
           carota subsp. sativus]
          Length = 297

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 47/83 (56%), Positives = 53/83 (63%), Gaps = 12/83 (14%)
 Frame = -3

Query: 216 QHSNNLLQLPSLT-PNFLQXXXXXXXXXXXT---RVNDIMLLNTKRDDQDDYKFLF-DMN 52
           Q  N LLQ PSLT PNFLQ           T   RVNDIM +N+K +DQ+DYKFLF D+N
Sbjct: 215 QQPNTLLQFPSLTNPNFLQLSHHQPHTDTSTTLARVNDIMTVNSKCEDQNDYKFLFHDIN 274

Query: 51  FE-----DELDSNR--IMFDDCL 4
           FE     DELDS+   IMFDDCL
Sbjct: 275 FEDGNMVDELDSDMHGIMFDDCL 297


>XP_017233836.1 PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Daucus carota
           subsp. sativus]
          Length = 272

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 34/61 (55%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
 Frame = -3

Query: 216 QHSNNLLQLPSLTPNFLQXXXXXXXXXXXTR--VNDIMLLNTK-RDDQDDYKFLFDMNFE 46
           Q+ NNLLQ PSL PNFL            T   VNDIM+ N+K RDDQD Y+FLF+MNFE
Sbjct: 206 QNPNNLLQFPSLNPNFLHLSHQVHTNTSTTLACVNDIMMTNSKGRDDQDHYRFLFNMNFE 265

Query: 45  D 43
           +
Sbjct: 266 E 266


Top