BLASTX nr result

ID: Angelica27_contig00027674 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00027674
         (289 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017231618.1 PREDICTED: pentatricopeptide repeat-containing pr...    98   7e-22
XP_017231615.1 PREDICTED: pentatricopeptide repeat-containing pr...    98   7e-22

>XP_017231618.1 PREDICTED: pentatricopeptide repeat-containing protein At3g29290
           isoform X2 [Daucus carota subsp. sativus]
          Length = 611

 Score = 98.2 bits (243), Expect = 7e-22
 Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
 Frame = +1

Query: 4   LLKGSVAIFMNCNGWYSYKYQLSASRFHNLRNPFRVFDCSSYFRLEIKANTMRAKFNGKN 183
           LLKGSVA+ + CNG YSY+ +LSAS+  NLRNP   F+CSSYF  EIKANT RAK +G N
Sbjct: 4   LLKGSVAVTLKCNGCYSYEDELSASKILNLRNPCLFFNCSSYFGSEIKANTKRAKLSGNN 63

Query: 184 YFVLDGLH-LRMPRTYKLARAPSMDDVNIVNRNVGS 288
             +LDGLH L   R  K+A   ++  V+  NRNV S
Sbjct: 64  CVLLDGLHSLTGLRHSKMATTNNLVRVSSTNRNVSS 99


>XP_017231615.1 PREDICTED: pentatricopeptide repeat-containing protein At3g29290
           isoform X1 [Daucus carota subsp. sativus] XP_017231617.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290 isoform X1 [Daucus carota subsp. sativus]
          Length = 612

 Score = 98.2 bits (243), Expect = 7e-22
 Identities = 54/96 (56%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
 Frame = +1

Query: 4   LLKGSVAIFMNCNGWYSYKYQLSASRFHNLRNPFRVFDCSSYFRLEIKANTMRAKFNGKN 183
           LLKGSVA+ + CNG YSY+ +LSAS+  NLRNP   F+CSSYF  EIKANT RAK +G N
Sbjct: 4   LLKGSVAVTLKCNGCYSYEDELSASKILNLRNPCLFFNCSSYFGSEIKANTKRAKLSGNN 63

Query: 184 YFVLDGLH-LRMPRTYKLARAPSMDDVNIVNRNVGS 288
             +LDGLH L   R  K+A   ++  V+  NRNV S
Sbjct: 64  CVLLDGLHSLTGLRHSKMATTNNLVRVSSTNRNVSS 99


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