BLASTX nr result

ID: Angelica27_contig00024833 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00024833
         (615 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM97765.1 hypothetical protein DCAR_014873 [Daucus carota subsp...    65   6e-09
XP_017248078.1 PREDICTED: mediator of RNA polymerase II transcri...    65   6e-09
AIU49735.1 RNA polymerase II transcription mediator, partial [Eu...    60   5e-07
KCW82816.1 hypothetical protein EUGRSUZ_C04186 [Eucalyptus grandis]    60   5e-07
XP_010049981.1 PREDICTED: mediator of RNA polymerase II transcri...    60   5e-07
XP_018857876.1 PREDICTED: mediator of RNA polymerase II transcri...    59   7e-07
XP_012078753.1 PREDICTED: mediator of RNA polymerase II transcri...    59   1e-06
XP_012078752.1 PREDICTED: mediator of RNA polymerase II transcri...    59   1e-06
XP_012078751.1 PREDICTED: mediator of RNA polymerase II transcri...    59   1e-06
AIU49752.1 RNA polymerase II transcription mediator, partial [Pr...    58   2e-06
XP_008242750.1 PREDICTED: mediator of RNA polymerase II transcri...    58   2e-06
XP_007204608.1 hypothetical protein PRUPE_ppa002594mg [Prunus pe...    58   2e-06
XP_019155132.1 PREDICTED: mediator of RNA polymerase II transcri...    58   2e-06
XP_019155131.1 PREDICTED: mediator of RNA polymerase II transcri...    58   2e-06
AIU49763.1 RNA polymerase II transcription mediator, partial [Vi...    57   3e-06
XP_002285089.1 PREDICTED: mediator of RNA polymerase II transcri...    57   3e-06
AIU49719.1 RNA polymerase II transcription mediator, partial [Aq...    57   4e-06
AIU49748.1 RNA polymerase II transcription mediator, partial [Ma...    57   5e-06
XP_004141551.1 PREDICTED: mediator of RNA polymerase II transcri...    57   6e-06
OAY47068.1 hypothetical protein MANES_06G049700 [Manihot esculenta]    57   6e-06

>KZM97765.1 hypothetical protein DCAR_014873 [Daucus carota subsp. sativus]
          Length = 655

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFNPSLGVN+TG  ENYLELN SQGASV
Sbjct: 291 FDEQVFDLVNREAFNPSLGVNITGIRENYLELNLSQGASV 330


>XP_017248078.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Daucus carota subsp. sativus]
          Length = 659

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFNPSLGVN+TG  ENYLELN SQGASV
Sbjct: 295 FDEQVFDLVNREAFNPSLGVNITGIRENYLELNLSQGASV 334


>AIU49735.1 RNA polymerase II transcription mediator, partial [Eucalyptus
           grandis]
          Length = 517

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFNPSLGVNVTG  ENYL+L+  QG SV
Sbjct: 231 FDEQVFDLVNREAFNPSLGVNVTGIEENYLQLSLGQGTSV 270


>KCW82816.1 hypothetical protein EUGRSUZ_C04186 [Eucalyptus grandis]
          Length = 554

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFNPSLGVNVTG  ENYL+L+  QG SV
Sbjct: 285 FDEQVFDLVNREAFNPSLGVNVTGIEENYLQLSLGQGTSV 324


>XP_010049981.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Eucalyptus grandis] KCW82815.1 hypothetical protein
           EUGRSUZ_C04186 [Eucalyptus grandis]
          Length = 651

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFNPSLGVNVTG  ENYL+L+  QG SV
Sbjct: 285 FDEQVFDLVNREAFNPSLGVNVTGIEENYLQLSLGQGTSV 324


>XP_018857876.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like [Juglans regia]
          Length = 660

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFNPSLGVNVTG  ENYL+L+  QG SV
Sbjct: 288 FDEQVFDLVNREAFNPSLGVNVTGIRENYLQLSIGQGTSV 327


>XP_012078753.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X3 [Jatropha curcas]
          Length = 553

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 33/67 (49%), Positives = 43/67 (64%)
 Frame = +2

Query: 413 SSSLHTSTLLCKRVHW*KCGY*RSRRGYKKKVFDQVNREAFNPSLGVNVTGTGENYLELN 592
           + S+  + LL +RVH         +  + ++VFD VNREAFN SLGVNVTG  ENYL+L+
Sbjct: 164 NESIKETHLLLRRVH---------QAIFDEQVFDMVNREAFNQSLGVNVTGIQENYLQLS 214

Query: 593 QSQGASV 613
            S G SV
Sbjct: 215 ISTGTSV 221


>XP_012078752.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X2 [Jatropha curcas]
          Length = 568

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 33/67 (49%), Positives = 43/67 (64%)
 Frame = +2

Query: 413 SSSLHTSTLLCKRVHW*KCGY*RSRRGYKKKVFDQVNREAFNPSLGVNVTGTGENYLELN 592
           + S+  + LL +RVH         +  + ++VFD VNREAFN SLGVNVTG  ENYL+L+
Sbjct: 275 NESIKETHLLLRRVH---------QAIFDEQVFDMVNREAFNQSLGVNVTGIQENYLQLS 325

Query: 593 QSQGASV 613
            S G SV
Sbjct: 326 ISTGTSV 332


>XP_012078751.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           17-like isoform X1 [Jatropha curcas] KDP32381.1
           hypothetical protein JCGZ_13306 [Jatropha curcas]
          Length = 664

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 33/67 (49%), Positives = 43/67 (64%)
 Frame = +2

Query: 413 SSSLHTSTLLCKRVHW*KCGY*RSRRGYKKKVFDQVNREAFNPSLGVNVTGTGENYLELN 592
           + S+  + LL +RVH         +  + ++VFD VNREAFN SLGVNVTG  ENYL+L+
Sbjct: 275 NESIKETHLLLRRVH---------QAIFDEQVFDMVNREAFNQSLGVNVTGIQENYLQLS 325

Query: 593 QSQGASV 613
            S G SV
Sbjct: 326 ISTGTSV 332


>AIU49752.1 RNA polymerase II transcription mediator, partial [Prunus persica]
          Length = 515

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFN SLGVNVTG  ENYL+LN  QG SV
Sbjct: 231 FDEQVFDLVNREAFNQSLGVNVTGIQENYLQLNIGQGTSV 270


>XP_008242750.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Prunus mume]
          Length = 654

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFN SLGVNVTG  ENYL+LN  QG SV
Sbjct: 284 FDEQVFDLVNREAFNQSLGVNVTGIQENYLQLNIGQGTSV 323


>XP_007204608.1 hypothetical protein PRUPE_ppa002594mg [Prunus persica] ONH98285.1
           hypothetical protein PRUPE_7G240500 [Prunus persica]
          Length = 654

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFN SLGVNVTG  ENYL+LN  QG SV
Sbjct: 284 FDEQVFDLVNREAFNQSLGVNVTGIQENYLQLNIGQGTSV 323


>XP_019155132.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           isoform X2 [Ipomoea nil]
          Length = 666

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFNPSLGV+VTG  ENYL L   QGASV
Sbjct: 297 FDEQVFDLVNREAFNPSLGVDVTGIQENYLRLGIGQGASV 336


>XP_019155131.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           isoform X1 [Ipomoea nil]
          Length = 667

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFNPSLGV+VTG  ENYL L   QGASV
Sbjct: 298 FDEQVFDLVNREAFNPSLGVDVTGIQENYLRLGIGQGASV 337


>AIU49763.1 RNA polymerase II transcription mediator, partial [Vitis vinifera]
          Length = 516

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFN S GVNVTG  ENYL+LN  QGASV
Sbjct: 230 FDEQVFDLVNREAFNSSSGVNVTGIRENYLQLNIGQGASV 269


>XP_002285089.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Vitis vinifera] CAN63500.1 hypothetical protein
           VITISV_011675 [Vitis vinifera] CBI28174.3 unnamed
           protein product, partial [Vitis vinifera]
          Length = 660

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VNREAFN S GVNVTG  ENYL+LN  QGASV
Sbjct: 286 FDEQVFDLVNREAFNSSSGVNVTGIRENYLQLNIGQGASV 325


>AIU49719.1 RNA polymerase II transcription mediator, partial [Aquilegia
           coerulea]
          Length = 514

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGAS 610
           + ++VFD VNREAF+PS+GVNVTG  ENYLEL   QGAS
Sbjct: 228 FDEQVFDLVNREAFSPSVGVNVTGIRENYLELGIGQGAS 266


>AIU49748.1 RNA polymerase II transcription mediator, partial [Manihot
           esculenta]
          Length = 517

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 32/61 (52%), Positives = 39/61 (63%)
 Frame = +2

Query: 431 STLLCKRVHW*KCGY*RSRRGYKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGAS 610
           + LL + VH         R  + ++VFD VNREAFN SLGVNVTG  ENYL+L+ S G S
Sbjct: 219 TNLLLREVH---------RAIFDEQVFDMVNREAFNQSLGVNVTGIQENYLQLSISPGIS 269

Query: 611 V 613
           V
Sbjct: 270 V 270


>XP_004141551.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17
           [Cucumis sativus] XP_011656092.1 PREDICTED: mediator of
           RNA polymerase II transcription subunit 17 [Cucumis
           sativus] XP_011656093.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 17 [Cucumis sativus]
           KGN52676.1 hypothetical protein Csa_5G650410 [Cucumis
           sativus]
          Length = 662

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 25/40 (62%), Positives = 33/40 (82%)
 Frame = +2

Query: 494 YKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGASV 613
           + ++VFD VN+EAFNPS+G+NVTG  ENYL+L+  QG SV
Sbjct: 288 FSEQVFDLVNQEAFNPSVGINVTGIRENYLQLSIDQGTSV 327


>OAY47068.1 hypothetical protein MANES_06G049700 [Manihot esculenta]
          Length = 665

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 32/61 (52%), Positives = 39/61 (63%)
 Frame = +2

Query: 431 STLLCKRVHW*KCGY*RSRRGYKKKVFDQVNREAFNPSLGVNVTGTGENYLELNQSQGAS 610
           + LL + VH         R  + ++VFD VNREAFN SLGVNVTG  ENYL+L+ S G S
Sbjct: 280 TNLLLREVH---------RAIFDEQVFDMVNREAFNQSLGVNVTGIQENYLQLSISPGIS 330

Query: 611 V 613
           V
Sbjct: 331 V 331


Top