BLASTX nr result

ID: Angelica27_contig00024703 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00024703
         (437 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017257745.1 PREDICTED: zinc finger CCCH domain-containing pro...    64   4e-09
KZM89725.1 hypothetical protein DCAR_022912 [Daucus carota subsp...    64   4e-09
XP_017257744.1 PREDICTED: zinc finger CCCH domain-containing pro...    64   4e-09

>XP_017257745.1 PREDICTED: zinc finger CCCH domain-containing protein 19 isoform X2
           [Daucus carota subsp. sativus]
          Length = 1734

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 50/151 (33%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
 Frame = +1

Query: 10  KVVSESEMEDVLGAEL-------EIRDNEVVKADCETRLXXXXXXXXXXXXXGKCET--- 159
           KVV ESE++D  G EL       E++  E+ K DC T +              K E    
Sbjct: 221 KVVPESEIKDEAGVELQAGAVCEEVKAEEL-KGDCGTEVVGEALCEVGNEAENKSEIETE 279

Query: 160 MGIKLMAXXXXXXXXXXXXXXXXFVVGGLLNGDEVIGGKPKDKLEHSSGLVSVADDMAME 339
           M +                    +V    LN  E      +D  EHSSGL+ +A+D  ME
Sbjct: 280 MKVSREPVKNVDDMVEEEKVEMGYVSSQSLNEVEERAANIEDNAEHSSGLIGLAEDTVME 339

Query: 340 DKRMGYES--KENDDEMESIPELSDEEDGME 426
           +K +  ES  K+ DDE++S PE  DEED ME
Sbjct: 340 EKNLVMESVNKKRDDELDSAPESDDEEDIME 370


>KZM89725.1 hypothetical protein DCAR_022912 [Daucus carota subsp. sativus]
          Length = 1741

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 50/151 (33%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
 Frame = +1

Query: 10  KVVSESEMEDVLGAEL-------EIRDNEVVKADCETRLXXXXXXXXXXXXXGKCET--- 159
           KVV ESE++D  G EL       E++  E+ K DC T +              K E    
Sbjct: 221 KVVPESEIKDEAGVELQAGAVCEEVKAEEL-KGDCGTEVVGEALCEVGNEAENKSEIETE 279

Query: 160 MGIKLMAXXXXXXXXXXXXXXXXFVVGGLLNGDEVIGGKPKDKLEHSSGLVSVADDMAME 339
           M +                    +V    LN  E      +D  EHSSGL+ +A+D  ME
Sbjct: 280 MKVSREPVKNVDDMVEEEKVEMGYVSSQSLNEVEERAANIEDNAEHSSGLIGLAEDTVME 339

Query: 340 DKRMGYES--KENDDEMESIPELSDEEDGME 426
           +K +  ES  K+ DDE++S PE  DEED ME
Sbjct: 340 EKNLVMESVNKKRDDELDSAPESDDEEDIME 370


>XP_017257744.1 PREDICTED: zinc finger CCCH domain-containing protein 19 isoform X1
           [Daucus carota subsp. sativus]
          Length = 1766

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 50/151 (33%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
 Frame = +1

Query: 10  KVVSESEMEDVLGAEL-------EIRDNEVVKADCETRLXXXXXXXXXXXXXGKCET--- 159
           KVV ESE++D  G EL       E++  E+ K DC T +              K E    
Sbjct: 221 KVVPESEIKDEAGVELQAGAVCEEVKAEEL-KGDCGTEVVGEALCEVGNEAENKSEIETE 279

Query: 160 MGIKLMAXXXXXXXXXXXXXXXXFVVGGLLNGDEVIGGKPKDKLEHSSGLVSVADDMAME 339
           M +                    +V    LN  E      +D  EHSSGL+ +A+D  ME
Sbjct: 280 MKVSREPVKNVDDMVEEEKVEMGYVSSQSLNEVEERAANIEDNAEHSSGLIGLAEDTVME 339

Query: 340 DKRMGYES--KENDDEMESIPELSDEEDGME 426
           +K +  ES  K+ DDE++S PE  DEED ME
Sbjct: 340 EKNLVMESVNKKRDDELDSAPESDDEEDIME 370


Top