BLASTX nr result

ID: Angelica27_contig00020399 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00020399
         (422 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017224449.1 PREDICTED: transcription termination factor MTERF...   134   3e-34
KVH97127.1 Mitochodrial transcription termination factor-related...    60   1e-07
XP_019241043.1 PREDICTED: transcription termination factor MTERF...    57   1e-06

>XP_017224449.1 PREDICTED: transcription termination factor MTERF4, chloroplastic
           [Daucus carota subsp. sativus]
          Length = 506

 Score =  134 bits (336), Expect = 3e-34
 Identities = 62/74 (83%), Positives = 67/74 (90%)
 Frame = -1

Query: 224 MWSFLRKRLYFDSILRNPFHIYPQNLLNSMNCIHKPHQNLCFQEPRVSRIRPFSAQPNKF 45
           M S LRKRL+FDSILRNPF++YPQNLL+ MN IHKP QN CFQEP VSRIRPFSAQP+KF
Sbjct: 1   MRSLLRKRLHFDSILRNPFYVYPQNLLDCMNSIHKPRQNPCFQEPGVSRIRPFSAQPSKF 60

Query: 44  PEYEMPTVTWGVVQ 3
           PEYEMPTVTWGVVQ
Sbjct: 61  PEYEMPTVTWGVVQ 74


>KVH97127.1 Mitochodrial transcription termination factor-related protein
           [Cynara cardunculus var. scolymus]
          Length = 504

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 35/74 (47%), Positives = 42/74 (56%)
 Frame = -1

Query: 224 MWSFLRKRLYFDSILRNPFHIYPQNLLNSMNCIHKPHQNLCFQEPRVSRIRPFSAQPNKF 45
           M   LR++  F S L NP H +  N    +    KP Q   F   RV   +PFS + +KF
Sbjct: 1   MMFLLRRKQSFKSFLINPLH-FTSNKSKGIIFPPKPSQEPQF---RVLSFQPFSTRSSKF 56

Query: 44  PEYEMPTVTWGVVQ 3
           PEYEMPTVTWGVVQ
Sbjct: 57  PEYEMPTVTWGVVQ 70


>XP_019241043.1 PREDICTED: transcription termination factor MTERF4, chloroplastic
           [Nicotiana attenuata] OIT19785.1 transcription
           termination factor mterf4, chloroplastic [Nicotiana
           attenuata]
          Length = 502

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/74 (43%), Positives = 39/74 (52%)
 Frame = -1

Query: 224 MWSFLRKRLYFDSILRNPFHIYPQNLLNSMNCIHKPHQNLCFQEPRVSRIRPFSAQPNKF 45
           M S LR+     SILR P   + +  L        P  +  +  PRV    PFS   +KF
Sbjct: 1   MSSILRRNQSLKSILRTPKDPFTKPTLKPYK---NPQTSSTYFPPRVLNQIPFSTHSSKF 57

Query: 44  PEYEMPTVTWGVVQ 3
           PEYEMPTVTWGV+Q
Sbjct: 58  PEYEMPTVTWGVIQ 71


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