BLASTX nr result

ID: Angelica27_contig00019356 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00019356
         (670 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017252946.1 PREDICTED: CRM-domain containing factor CFM3, chl...   132   6e-45
KVI12180.1 RNA-binding, CRM domain-containing protein [Cynara ca...    50   4e-12
XP_007203795.1 hypothetical protein PRUPE_ppa001111mg [Prunus pe...    52   2e-09
XP_019173427.1 PREDICTED: CRM-domain containing factor CFM3, chl...    64   3e-08
XP_008242355.1 PREDICTED: CRM-domain containing factor CFM3, chl...    50   1e-07
XP_016477563.1 PREDICTED: CRM-domain containing factor CFM3, chl...    62   2e-07
GAU34786.1 hypothetical protein TSUD_205900 [Trifolium subterran...    62   2e-07
XP_009799178.1 PREDICTED: chloroplastic group IIA intron splicin...    62   2e-07
XP_012449426.1 PREDICTED: chloroplastic group IIA intron splicin...    48   2e-07
KJB65181.1 hypothetical protein B456_010G083500 [Gossypium raimo...    48   2e-07
XP_012449427.1 PREDICTED: chloroplastic group IIA intron splicin...    48   2e-07
XP_016682468.1 PREDICTED: CRM-domain containing factor CFM3A, ch...    48   3e-07
XP_016682469.1 PREDICTED: CRM-domain containing factor CFM3A, ch...    48   3e-07
XP_016479483.1 PREDICTED: CRM-domain containing factor CFM3, chl...    61   3e-07
XP_018626791.1 PREDICTED: CRM-domain containing factor CFM3, chl...    61   3e-07
XP_009602352.1 PREDICTED: CRM-domain containing factor CFM3, chl...    61   3e-07
XP_018626790.1 PREDICTED: CRM-domain containing factor CFM3, chl...    61   3e-07
XP_016479482.1 PREDICTED: CRM-domain containing factor CFM3, chl...    61   3e-07
XP_011093738.1 PREDICTED: chloroplastic group IIA intron splicin...    60   8e-07
XP_016666918.1 PREDICTED: CRM-domain containing factor CFM3, chl...    46   1e-06

>XP_017252946.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like [Daucus carota subsp.
           sativus] KZM93837.1 hypothetical protein DCAR_017082
           [Daucus carota subsp. sativus]
          Length = 1024

 Score =  106 bits (265), Expect(2) = 6e-45
 Identities = 63/124 (50%), Positives = 77/124 (62%), Gaps = 11/124 (8%)
 Frame = +2

Query: 305 AGTESRIDDNSVVSD----GFVKNSVKFAPWDQRSKNKTTHFDFEGKSVEISSGRGKRVD 472
           A TESRIDDNSVVS+    GFVKN VK A W+QRSK   TH DFE +  E S  RGKR  
Sbjct: 111 AATESRIDDNSVVSESVSVGFVKNRVKLAQWNQRSKTHKTHMDFEAE--ESSGVRGKRDG 168

Query: 473 EFDGTESRIDESELVDVSDSVKF-------APWDKRSNFDNAQVDYEVGNVESRNGRGKR 631
           EF GTESR+D++ +V  S SV +       +PWD+R     AQ+D    +VES + RG+ 
Sbjct: 169 EFAGTESRVDDNSVVSDSSSVSYVNRQARLSPWDQRIKPKKAQIDLNGTSVESSSVRGQT 228

Query: 632 FFEF 643
             EF
Sbjct: 229 IDEF 232



 Score =  102 bits (255), Expect(2) = 6e-45
 Identities = 52/79 (65%), Positives = 57/79 (72%)
 Frame = +1

Query: 25  SLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXXSFLEQIEDKWS 204
           SL ILYHNPQT S +SFNISRF+LFCS+QT+E DTQ             SFLEQIEDKWS
Sbjct: 26  SLCILYHNPQTISLRSFNISRFRLFCSHQTLELDTQ---NVKKKRKPRPSFLEQIEDKWS 82

Query: 205 VKTPSLRQKFPWEEEKKSK 261
           VKTP L QKFPWEE+   K
Sbjct: 83  VKTPCLTQKFPWEEDGHKK 101



 Score =  132 bits (331), Expect = 1e-31
 Identities = 68/127 (53%), Positives = 84/127 (66%), Gaps = 8/127 (6%)
 Frame = +2

Query: 305 AGTESRIDDNSVVSDG----FVKNSVKFAPWDQRSKNKTTHFDFEGKSVEISSGRGKRVD 472
           AGTESR+DDNSVVSD     +V    + +PWDQR K K    D  G SVE SS RG+ +D
Sbjct: 171 AGTESRVDDNSVVSDSSSVSYVNRQARLSPWDQRIKPKKAQIDLNGTSVESSSVRGQTID 230

Query: 473 EFDGTESRIDE----SELVDVSDSVKFAPWDKRSNFDNAQVDYEVGNVESRNGRGKRFFE 640
           EF G +SRID     S+ VDV + VKFAPWD+RSN +  Q+DYE GN+E+   R K   E
Sbjct: 231 EFAGIKSRIDNNMLVSDSVDVGNQVKFAPWDQRSNSNEGQIDYEAGNLETSTVREKTVDE 290

Query: 641 FPEGYVL 661
           FP+GY+L
Sbjct: 291 FPQGYLL 297


>KVI12180.1 RNA-binding, CRM domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 869

 Score = 49.7 bits (117), Expect(2) = 4e-12
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
 Frame = +2

Query: 275 QEELEFDEFDAGT-ESRIDDNSVVSDGFVKNSVKF---APWDQRSKNKTTHFDFEGKSVE 442
           +EE E +E + G  ESRI  NS   D    N +K+   APW Q +K +   FDFE ++ +
Sbjct: 115 EEEEEEEEEERGLDESRIGSNSFAGDSVRFNPIKYVKLAPWVQETKPQKPKFDFEDRNSQ 174

Query: 443 ISSGRGKRVDEFDGTESRIDESELVDVSDSVKFAPWDKRSNFDNAQVDYEVGNVESRNG 619
             S  GK  D F  +E R   + L  +SDS+        SN  N+++  + G   + +G
Sbjct: 175 KDSNGGKTDDRFVLSELRTASNSL--LSDSM-------ISNHSNSRIPQKDGGTTTIDG 224



 Score = 49.3 bits (116), Expect(2) = 4e-12
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
 Frame = +1

Query: 49  PQTTSSKSFN---ISRFKLFCSYQTVEFDTQXXXXXXXXXXXXX-SFLEQIEDKWSVKTP 216
           P +T++  F+    S FK FCS Q ++ +TQ              SF +Q+ +KWS K  
Sbjct: 16  PTSTTTLPFSRTHTSNFKFFCSDQRIQLETQQINPKIKKQRKPRPSFSDQVLEKWSRKPT 75

Query: 217 SLRQKFPWEEEKKSKERDIS 276
           SL +KFPW++E+  ++  I+
Sbjct: 76  SLLEKFPWQKEEIRQQEGIN 95


>XP_007203795.1 hypothetical protein PRUPE_ppa001111mg [Prunus persica]
          Length = 906

 Score = 52.0 bits (123), Expect(2) = 2e-09
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
 Frame = +1

Query: 22  PSLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXX--------SF 177
           P  ++L H+ QT S KS    RF++ C  +TV+ DTQ                     SF
Sbjct: 25  PLCFLLLHH-QTHSFKSCRALRFRVSC--KTVQVDTQEQPQRIKVAFEATRKKRKPKPSF 81

Query: 178 LEQIEDKWSVKTPSLRQKFPWEEEKK 255
            EQI+DKWS+K  S R KFPW+++ +
Sbjct: 82  FEQIQDKWSMKVNSPRDKFPWQKQNE 107



 Score = 37.7 bits (86), Expect(2) = 2e-09
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
 Frame = +2

Query: 266 EIFQEELEFDEFDAGTESRIDDNSVVSDGFVKNSVKFAPWDQRSKNKTTHFDFEGKSVEI 445
           E+ QEE E  E +   E  ++     S   + N + +APW   SK  T   D E ++ + 
Sbjct: 107 ELVQEEKEEVEEEDEEEEPVNQKVSFS---LPNRIVYAPWAHGSKRITPQVDSEPETSQH 163

Query: 446 SSGRGKRVDEFDGTESRIDESELVDVSDSVKFAPWDKRSNFDNAQVDYE-VGNV 604
           S  +GK +D F G       SE+   S +VK     +R    N +++ E VG +
Sbjct: 164 SGAQGKNLDGFAG------HSEIDTTSGAVKNEKSFERRFDSNRKLERERVGEI 211


>XP_019173427.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Ipomoea nil]
          Length = 891

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = +1

Query: 19  TPSLYILYHNP--QTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXXSFLEQIE 192
           +PS ++ +HNP   T S  SF   RFKL+CS QT   +               SFLE+I+
Sbjct: 12  SPSHHLYFHNPLFPTHSPTSFRTLRFKLYCS-QTTHSEITYTTPTRKKRKPRPSFLEKIQ 70

Query: 193 DKWSVKTPSLRQKFPWEEEKKSK 261
           +KWSVK  S R+ FPW+E+K  +
Sbjct: 71  EKWSVKPTSPRKNFPWQEQKSEE 93


>XP_008242355.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like [Prunus mume]
           XP_008242356.1 PREDICTED: CRM-domain containing factor
           CFM3, chloroplastic/mitochondrial-like [Prunus mume]
          Length = 930

 Score = 50.4 bits (119), Expect(2) = 1e-07
 Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
 Frame = +1

Query: 22  PSLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXX--------SF 177
           P  ++L H+ QT S KS    RF++ C  +TV+ DTQ                     SF
Sbjct: 25  PLCFLLLHH-QTHSFKSCRALRFRVSC--KTVQVDTQEQPQRIKVAFEATRKKRKPKPSF 81

Query: 178 LEQIEDKWSVKTPSLRQKFPW-------EEEKKSKERD 270
             QI+DKWS+K  S R KFPW       +EEK+  E D
Sbjct: 82  FVQIQDKWSMKVNSPRDKFPWQKQNELVQEEKEEVEED 119



 Score = 33.5 bits (75), Expect(2) = 1e-07
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +2

Query: 362 NSVKFAPWDQRSKNKTTHFDFEGKSVEISSGRGKRVDEFDGTESRIDESELVDVSDSVK 538
           N + +APW   SK  T   D E ++ + S  +GK +D F G       SE+   S +VK
Sbjct: 160 NRIIYAPWAHGSKRITPQVDSEPETSQHSGAQGKNLDGFAG------HSEIDTTSGAVK 212


>XP_016477563.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like, partial [Nicotiana
           tabacum]
          Length = 505

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   PFTPTHTPSLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXX-SF 177
           PF+   + +L      P+  S ++F     +++CS QT+  D +              SF
Sbjct: 17  PFSYPSSKTLQFPIPLPKIQSLQNFRAKSIRIYCSSQTIHSDKENQTNQTKKKQKPRPSF 76

Query: 178 LEQIEDKWSVKTPSLRQKFPWEE 246
           LEQ++DKWSVKT SLR+KFPW+E
Sbjct: 77  LEQVQDKWSVKTTSLREKFPWQE 99


>GAU34786.1 hypothetical protein TSUD_205900 [Trifolium subterraneum]
          Length = 777

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 29/86 (33%), Positives = 48/86 (55%)
 Frame = +1

Query: 25  SLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXXSFLEQIEDKWS 204
           SL+  +  P T  +K+  I +F L CS +T + +T+             SF  QI DKWS
Sbjct: 10  SLHFQFFQPLTPQTKTHTIFKFALSCSNETTQVETKVVKKKKNNNSRP-SFTHQIRDKWS 68

Query: 205 VKTPSLRQKFPWEEEKKSKERDISRR 282
           +K  S R+KFPW+E+++ +E ++  +
Sbjct: 69  IKLASQREKFPWQEQQEQQEAELEEQ 94


>XP_009799178.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Nicotiana sylvestris]
          Length = 827

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   PFTPTHTPSLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXX-SF 177
           PF+   + +L      P+  S ++F     +++CS QT+  D +              SF
Sbjct: 17  PFSYPSSKTLQFPIPLPKIQSLQNFRAKSIRIYCSSQTIHSDKENQTNQTKKKQKPRPSF 76

Query: 178 LEQIEDKWSVKTPSLRQKFPWEE 246
           LEQ++DKWSVKT SLR+KFPW+E
Sbjct: 77  LEQVQDKWSVKTTSLREKFPWQE 99


>XP_012449426.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X1 [Gossypium raimondii]
          Length = 883

 Score = 48.1 bits (113), Expect(2) = 2e-07
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
 Frame = +1

Query: 1   PFTPTH-------TPSLYILYHNPQTTSSKSFNISRFKLFC-SYQTVEFDTQXXXXXXXX 156
           PF  TH       + SLY L    +T ++ SF   +FK +C S+QTV+            
Sbjct: 5   PFPVTHQACPLSSSHSLYYLILQTKTQNN-SFRALKFKSYCVSHQTVKVGIDISKKKRKP 63

Query: 157 XXXXXSFLEQIEDKWSVK-TPSLRQKFPWEEEKKSKERD 270
                SFL+QI+DKWS K   S R+K PW+E+++ +E++
Sbjct: 64  KP---SFLDQIKDKWSQKPIISTREKLPWQEKEELEEQE 99



 Score = 34.7 bits (78), Expect(2) = 2e-07
 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
 Frame = +2

Query: 275 QEELE----FDEFDAGTESRIDDNSVVSDGF---VKNSVKFAPWDQRSKNKTTHFDFEGK 433
           QEE+E    F+   + TES  D    VSD     + + V  APW    K    HFDF  +
Sbjct: 98  QEEVEKEQTFEATASETESDEDPRVEVSDPVSIPLPSQVIAAPWSHGRKFNEPHFDFVPE 157

Query: 434 S------VEISSGRGKRVDEFDGTESRIDESELVD 520
           S      +E+S    K +D F G   RI++ EL+D
Sbjct: 158 SPEFESQIEVSFANEKPID-FVG--DRIEKPELLD 189


>KJB65181.1 hypothetical protein B456_010G083500 [Gossypium raimondii]
          Length = 875

 Score = 48.1 bits (113), Expect(2) = 2e-07
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
 Frame = +1

Query: 1   PFTPTH-------TPSLYILYHNPQTTSSKSFNISRFKLFC-SYQTVEFDTQXXXXXXXX 156
           PF  TH       + SLY L    +T ++ SF   +FK +C S+QTV+            
Sbjct: 5   PFPVTHQACPLSSSHSLYYLILQTKTQNN-SFRALKFKSYCVSHQTVKVGIDISKKKRKP 63

Query: 157 XXXXXSFLEQIEDKWSVK-TPSLRQKFPWEEEKKSKERD 270
                SFL+QI+DKWS K   S R+K PW+E+++ +E++
Sbjct: 64  KP---SFLDQIKDKWSQKPIISTREKLPWQEKEELEEQE 99



 Score = 34.7 bits (78), Expect(2) = 2e-07
 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
 Frame = +2

Query: 275 QEELE----FDEFDAGTESRIDDNSVVSDGF---VKNSVKFAPWDQRSKNKTTHFDFEGK 433
           QEE+E    F+   + TES  D    VSD     + + V  APW    K    HFDF  +
Sbjct: 98  QEEVEKEQTFEATASETESDEDPRVEVSDPVSIPLPSQVIAAPWSHGRKFNEPHFDFVPE 157

Query: 434 S------VEISSGRGKRVDEFDGTESRIDESELVD 520
           S      +E+S    K +D F G   RI++ EL+D
Sbjct: 158 SPEFESQIEVSFANEKPID-FVG--DRIEKPELLD 189


>XP_012449427.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic isoform X2 [Gossypium raimondii]
           KJB65180.1 hypothetical protein B456_010G083500
           [Gossypium raimondii]
          Length = 867

 Score = 48.1 bits (113), Expect(2) = 2e-07
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
 Frame = +1

Query: 1   PFTPTH-------TPSLYILYHNPQTTSSKSFNISRFKLFC-SYQTVEFDTQXXXXXXXX 156
           PF  TH       + SLY L    +T ++ SF   +FK +C S+QTV+            
Sbjct: 5   PFPVTHQACPLSSSHSLYYLILQTKTQNN-SFRALKFKSYCVSHQTVKVGIDISKKKRKP 63

Query: 157 XXXXXSFLEQIEDKWSVK-TPSLRQKFPWEEEKKSKERD 270
                SFL+QI+DKWS K   S R+K PW+E+++ +E++
Sbjct: 64  KP---SFLDQIKDKWSQKPIISTREKLPWQEKEELEEQE 99



 Score = 34.7 bits (78), Expect(2) = 2e-07
 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
 Frame = +2

Query: 275 QEELE----FDEFDAGTESRIDDNSVVSDGF---VKNSVKFAPWDQRSKNKTTHFDFEGK 433
           QEE+E    F+   + TES  D    VSD     + + V  APW    K    HFDF  +
Sbjct: 98  QEEVEKEQTFEATASETESDEDPRVEVSDPVSIPLPSQVIAAPWSHGRKFNEPHFDFVPE 157

Query: 434 S------VEISSGRGKRVDEFDGTESRIDESELVD 520
           S      +E+S    K +D F G   RI++ EL+D
Sbjct: 158 SPEFESQIEVSFANEKPID-FVG--DRIEKPELLD 189


>XP_016682468.1 PREDICTED: CRM-domain containing factor CFM3A,
           chloroplastic/mitochondrial-like isoform X1 [Gossypium
           hirsutum]
          Length = 772

 Score = 47.8 bits (112), Expect(2) = 3e-07
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
 Frame = +1

Query: 1   PFTPTH-------TPSLYILYHNPQTTSSKSFNISRFKLFC-SYQTVEFDTQXXXXXXXX 156
           PF  TH       + SLY L    +T ++ SF   +FK +C S+QTV+            
Sbjct: 5   PFPVTHQACPLSSSHSLYYLILQTKTHNN-SFRALKFKSYCVSHQTVKVGIDISKKKRKP 63

Query: 157 XXXXXSFLEQIEDKWSVK-TPSLRQKFPWEEEKKSKERD 270
                SFL+QI+DKWS K   S R+K PW+E+++ +E++
Sbjct: 64  KP---SFLDQIKDKWSQKPIISTREKLPWQEKEELEEQE 99



 Score = 34.7 bits (78), Expect(2) = 3e-07
 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
 Frame = +2

Query: 275 QEELE----FDEFDAGTESRIDDNSVVSDGF---VKNSVKFAPWDQRSKNKTTHFDFEGK 433
           QEE+E    F+   + TES  D    VSD     + + V  APW    K    HFDF  +
Sbjct: 98  QEEVEKEQTFEATASETESDEDPRVEVSDPVSIPLPSQVIAAPWSHGRKFNEPHFDFVPE 157

Query: 434 S------VEISSGRGKRVDEFDGTESRIDESELVD 520
           S      +E+S    K +D F G   RI++ EL+D
Sbjct: 158 SPEFESQIEVSFANEKPID-FVG--DRIEKPELLD 189


>XP_016682469.1 PREDICTED: CRM-domain containing factor CFM3A,
           chloroplastic/mitochondrial-like isoform X2 [Gossypium
           hirsutum]
          Length = 767

 Score = 47.8 bits (112), Expect(2) = 3e-07
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
 Frame = +1

Query: 1   PFTPTH-------TPSLYILYHNPQTTSSKSFNISRFKLFC-SYQTVEFDTQXXXXXXXX 156
           PF  TH       + SLY L    +T ++ SF   +FK +C S+QTV+            
Sbjct: 5   PFPVTHQACPLSSSHSLYYLILQTKTHNN-SFRALKFKSYCVSHQTVKVGIDISKKKRKP 63

Query: 157 XXXXXSFLEQIEDKWSVK-TPSLRQKFPWEEEKKSKERD 270
                SFL+QI+DKWS K   S R+K PW+E+++ +E++
Sbjct: 64  KP---SFLDQIKDKWSQKPIISTREKLPWQEKEELEEQE 99



 Score = 34.7 bits (78), Expect(2) = 3e-07
 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
 Frame = +2

Query: 275 QEELE----FDEFDAGTESRIDDNSVVSDGF---VKNSVKFAPWDQRSKNKTTHFDFEGK 433
           QEE+E    F+   + TES  D    VSD     + + V  APW    K    HFDF  +
Sbjct: 98  QEEVEKEQTFEATASETESDEDPRVEVSDPVSIPLPSQVIAAPWSHGRKFNEPHFDFVPE 157

Query: 434 S------VEISSGRGKRVDEFDGTESRIDESELVD 520
           S      +E+S    K +D F G   RI++ EL+D
Sbjct: 158 SPEFESQIEVSFANEKPID-FVG--DRIEKPELLD 189


>XP_016479483.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like isoform X2 [Nicotiana
           tabacum]
          Length = 830

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   PFTPTHTPSLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXX-SF 177
           PFT   +  L +    P+  S  +F     +++CS QT+  D +              SF
Sbjct: 17  PFTYPSSKPLQLPIPLPKIQSLHNFRAKNIRIYCSSQTIHSDKENQTNQSKKKQKPRPSF 76

Query: 178 LEQIEDKWSVKTPSLRQKFPWEE 246
           LEQ+++KWSVKT SLR+KFPW+E
Sbjct: 77  LEQVQNKWSVKTTSLREKFPWQE 99


>XP_018626791.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial isoform X3 [Nicotiana
           tomentosiformis]
          Length = 830

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   PFTPTHTPSLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXX-SF 177
           PFT   +  L +    P+  S  +F     +++CS QT+  D +              SF
Sbjct: 17  PFTYPSSKPLQLPIPLPKIQSLHNFRAKNIRIYCSSQTIHSDKENQTNQSKKKQKPRPSF 76

Query: 178 LEQIEDKWSVKTPSLRQKFPWEE 246
           LEQ+++KWSVKT SLR+KFPW+E
Sbjct: 77  LEQVQNKWSVKTTSLREKFPWQE 99


>XP_009602352.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial isoform X2 [Nicotiana
           tomentosiformis]
          Length = 832

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   PFTPTHTPSLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXX-SF 177
           PFT   +  L +    P+  S  +F     +++CS QT+  D +              SF
Sbjct: 17  PFTYPSSKPLQLPIPLPKIQSLHNFRAKNIRIYCSSQTIHSDKENQTNQSKKKQKPRPSF 76

Query: 178 LEQIEDKWSVKTPSLRQKFPWEE 246
           LEQ+++KWSVKT SLR+KFPW+E
Sbjct: 77  LEQVQNKWSVKTTSLREKFPWQE 99


>XP_018626790.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial isoform X1 [Nicotiana
           tomentosiformis]
          Length = 840

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   PFTPTHTPSLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXX-SF 177
           PFT   +  L +    P+  S  +F     +++CS QT+  D +              SF
Sbjct: 17  PFTYPSSKPLQLPIPLPKIQSLHNFRAKNIRIYCSSQTIHSDKENQTNQSKKKQKPRPSF 76

Query: 178 LEQIEDKWSVKTPSLRQKFPWEE 246
           LEQ+++KWSVKT SLR+KFPW+E
Sbjct: 77  LEQVQNKWSVKTTSLREKFPWQE 99


>XP_016479482.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like isoform X1 [Nicotiana
           tabacum]
          Length = 840

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   PFTPTHTPSLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDTQXXXXXXXXXXXXX-SF 177
           PFT   +  L +    P+  S  +F     +++CS QT+  D +              SF
Sbjct: 17  PFTYPSSKPLQLPIPLPKIQSLHNFRAKNIRIYCSSQTIHSDKENQTNQSKKKQKPRPSF 76

Query: 178 LEQIEDKWSVKTPSLRQKFPWEE 246
           LEQ+++KWSVKT SLR+KFPW+E
Sbjct: 77  LEQVQNKWSVKTTSLREKFPWQE 99


>XP_011093738.1 PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Sesamum indicum]
          Length = 887

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
 Frame = +1

Query: 25  SLYILYHNPQTTSSKSFNISRFKLFCSYQTVEFDT---QXXXXXXXXXXXXXSFLEQIED 195
           SL+ L    QT S +SF   + ++ C  +TV+ +    Q             SFLEQ++ 
Sbjct: 22  SLFFLELGAQTRSLQSFRPRKLRISCCQKTVQLENETKQKAYPVKKKRKPRPSFLEQVQS 81

Query: 196 KWSVKTPSLRQKFPWEEEK 252
           KWS++TP LR+ FPW+EE+
Sbjct: 82  KWSIRTPPLRENFPWQEEE 100


>XP_016666918.1 PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like isoform X1 [Gossypium
           hirsutum]
          Length = 910

 Score = 46.2 bits (108), Expect(2) = 1e-06
 Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
 Frame = +1

Query: 1   PFTPTH-------TPSLYILYHNPQTTSSKSFNISRFKLFC-SYQTVEFDTQXXXXXXXX 156
           PF  TH       + SLY L    +T ++ SF   +FK +C S+QT++            
Sbjct: 5   PFPVTHQACVLSSSHSLYYLILQTKTQNN-SFRALKFKSYCVSHQTIKVGIDISKKKRKP 63

Query: 157 XXXXXSFLEQIEDKWSVK-TPSLRQKFPWEEEKKSKERD 270
                SFL QI+DKWS K   S R+K PW+E+++ +E++
Sbjct: 64  KP---SFLYQIKDKWSQKPIISTREKLPWQEKEELEEQE 99



 Score = 33.9 bits (76), Expect(2) = 1e-06
 Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
 Frame = +2

Query: 266 EIFQEELEFDEFDAGTESRIDDNSVVSDGF---VKNSVKFAPWDQRSKNKTTHFDFEGKS 436
           E  Q+E  F+   + TES  D     SD     + + V  APW    K    HFDF  +S
Sbjct: 99  EEVQKEQTFEATASETESDEDPRVEASDQVSFPLPSRVIAAPWSHGRKFNELHFDFVPES 158

Query: 437 ------VEISSGRGKRVDEFDGTESRIDESELVD 520
                 +E+S    K +D F G   RI++ EL+D
Sbjct: 159 PEFESQIEVSFANEKPID-FVG--DRIEKPELLD 189


Top