BLASTX nr result

ID: Angelica27_contig00019352 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00019352
         (515 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017248267.1 PREDICTED: ATP-dependent RNA helicase-like protei...   122   3e-29
XP_017238994.1 PREDICTED: ATP-dependent RNA helicase-like protei...    62   3e-08

>XP_017248267.1 PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Daucus
           carota subsp. sativus] KZM97583.1 hypothetical protein
           DCAR_015055 [Daucus carota subsp. sativus]
          Length = 705

 Score =  122 bits (306), Expect = 3e-29
 Identities = 69/107 (64%), Positives = 75/107 (70%)
 Frame = +1

Query: 1   SYHAKSFHQSMIQGPDKQQXXXXXXPSKGGNDADSLPGSYQAKSFHESMVSHPEKRSRSR 180
           SYHAKSFHQSMIQ  DKQ+      P KGG DA++LPGSYQAKSFHESMVS PEKRS SR
Sbjct: 602 SYHAKSFHQSMIQDLDKQRSRSRS-PDKGGYDANTLPGSYQAKSFHESMVSRPEKRS-SR 659

Query: 181 SPNGSDTGDHCGXXXXXXXXXXXXXXXXQGQERSPLQSFHKAMMERS 321
           SPNGS +GD  G                QGQERSP +SFH+AMMERS
Sbjct: 660 SPNGSGSGDR-GRSRSRSRSVDRFDSSSQGQERSPTRSFHRAMMERS 705


>XP_017238994.1 PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Daucus
           carota subsp. sativus]
          Length = 656

 Score = 62.4 bits (150), Expect = 3e-08
 Identities = 37/77 (48%), Positives = 42/77 (54%)
 Frame = +1

Query: 85  GGNDADSLPGSYQAKSFHESMVSHPEKRSRSRSPNGSDTGDHCGXXXXXXXXXXXXXXXX 264
           GG +    PGSY AKSFHE MVS P+KRSRSRSP G   G H                  
Sbjct: 593 GGRNEVDAPGSYHAKSFHEGMVSLPQKRSRSRSPTG---GAH------------RFDSSS 637

Query: 265 QGQERSPLQSFHKAMME 315
           Q Q+ + + SFHKAMME
Sbjct: 638 QAQDGTQVHSFHKAMME 654


Top