BLASTX nr result

ID: Angelica27_contig00013349 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00013349
         (1551 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM95137.1 hypothetical protein DCAR_018379 [Daucus carota subsp...   100   1e-18
XP_017249058.1 PREDICTED: probable RNA-dependent RNA polymerase ...   100   1e-18
KZN01939.1 hypothetical protein DCAR_010693 [Daucus carota subsp...    86   1e-16
XP_017241746.1 PREDICTED: probable RNA-dependent RNA polymerase ...    86   8e-14
XP_017241744.1 PREDICTED: probable RNA-dependent RNA polymerase ...    86   9e-14

>KZM95137.1 hypothetical protein DCAR_018379 [Daucus carota subsp. sativus]
          Length = 833

 Score =  100 bits (249), Expect = 1e-18
 Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
 Frame = +3

Query: 621 MADSEATLPMRVERMIGKICFD--LPPPDADARKILASIGEQDSMHMLKIISQARVKTLS 794
           M +SE  LPMRV+RM+ KICF   LPP D ++RKILA IGE +SMHMLKIISQAR+KT S
Sbjct: 1   MEESEVELPMRVDRMVQKICFHQCLPPLDTESRKILACIGEDNSMHMLKIISQARIKTFS 60

Query: 795 GFIKHLSKDYKPKPPPFNSTLSLTSTYQSP 884
           GFI HL+++YKP+        SL+ +  SP
Sbjct: 61  GFINHLAQNYKPQ--------SLSQSINSP 82


>XP_017249058.1 PREDICTED: probable RNA-dependent RNA polymerase 5 [Daucus carota
           subsp. sativus]
          Length = 1032

 Score =  100 bits (249), Expect = 1e-18
 Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 2/90 (2%)
 Frame = +3

Query: 621 MADSEATLPMRVERMIGKICFD--LPPPDADARKILASIGEQDSMHMLKIISQARVKTLS 794
           M +SE  LPMRV+RM+ KICF   LPP D ++RKILA IGE +SMHMLKIISQAR+KT S
Sbjct: 1   MEESEVELPMRVDRMVQKICFHQCLPPLDTESRKILACIGEDNSMHMLKIISQARIKTFS 60

Query: 795 GFIKHLSKDYKPKPPPFNSTLSLTSTYQSP 884
           GFI HL+++YKP+        SL+ +  SP
Sbjct: 61  GFINHLAQNYKPQ--------SLSQSINSP 82


>KZN01939.1 hypothetical protein DCAR_010693 [Daucus carota subsp. sativus]
          Length = 101

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 49/84 (58%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
 Frame = +3

Query: 642 LPMRVERMIGKICFDL--PPPDADARKILASIGEQDSMHMLKIISQARV-KTLSGFIKHL 812
           LP RVE MI +IC +   P PDADARKILASIGE+ S+HML IISQ ++ KT SGFIK+L
Sbjct: 10  LPERVETMIEQICKEQKQPHPDADARKILASIGEEKSLHMLTIISQTQIKKTFSGFIKYL 69

Query: 813 SKDYKPKPPPFNSTLSLTSTYQSP 884
            K+Y+PK  P +  +S  ST  +P
Sbjct: 70  LKNYRPK--PLSHAMSPKSTLSTP 91


>XP_017241746.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X3
           [Daucus carota subsp. sativus]
          Length = 879

 Score = 85.5 bits (210), Expect = 8e-14
 Identities = 49/84 (58%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
 Frame = +3

Query: 642 LPMRVERMIGKICFDL--PPPDADARKILASIGEQDSMHMLKIISQARV-KTLSGFIKHL 812
           LP RVE MI +IC +   P PDADARKILASIGE+ S+HML IISQ ++ KT SGFIK+L
Sbjct: 10  LPERVETMIEQICKEQKQPHPDADARKILASIGEEKSLHMLTIISQTQIKKTFSGFIKYL 69

Query: 813 SKDYKPKPPPFNSTLSLTSTYQSP 884
            K+Y+PK  P +  +S  ST  +P
Sbjct: 70  LKNYRPK--PLSHAMSPKSTLSTP 91


>XP_017241744.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
           [Daucus carota subsp. sativus] XP_017241745.1 PREDICTED:
           probable RNA-dependent RNA polymerase 3 isoform X2
           [Daucus carota subsp. sativus] KZN01938.1 hypothetical
           protein DCAR_010692 [Daucus carota subsp. sativus]
          Length = 1050

 Score = 85.5 bits (210), Expect = 9e-14
 Identities = 49/84 (58%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
 Frame = +3

Query: 642 LPMRVERMIGKICFDL--PPPDADARKILASIGEQDSMHMLKIISQARV-KTLSGFIKHL 812
           LP RVE MI +IC +   P PDADARKILASIGE+ S+HML IISQ ++ KT SGFIK+L
Sbjct: 10  LPERVETMIEQICKEQKQPHPDADARKILASIGEEKSLHMLTIISQTQIKKTFSGFIKYL 69

Query: 813 SKDYKPKPPPFNSTLSLTSTYQSP 884
            K+Y+PK  P +  +S  ST  +P
Sbjct: 70  LKNYRPK--PLSHAMSPKSTLSTP 91


Top