BLASTX nr result

ID: Angelica27_contig00012205 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00012205
         (425 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM84883.1 hypothetical protein DCAR_027695 [Daucus carota subsp...    62   1e-08
XP_017222581.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein ...    62   1e-08

>KZM84883.1 hypothetical protein DCAR_027695 [Daucus carota subsp. sativus]
          Length = 425

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 33/53 (62%), Positives = 36/53 (67%)
 Frame = -3

Query: 159 KDRVFDVNLXXXXXXXXXXXXRFDEKRVRVSDEKSERKRFEDVNGEERDERRE 1
           ++RV DVNL            RFDEKR RVSDE+ ERKRFEDVNGEER ER E
Sbjct: 68  RERVLDVNLSKRKERGGSEEERFDEKRARVSDERRERKRFEDVNGEERIERDE 120


>XP_017222581.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
           [Daucus carota subsp. sativus] XP_017222582.1 PREDICTED:
           U4/U6 small nuclear ribonucleoprotein Prp3 isoform X2
           [Daucus carota subsp. sativus]
          Length = 829

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 33/53 (62%), Positives = 36/53 (67%)
 Frame = -3

Query: 159 KDRVFDVNLXXXXXXXXXXXXRFDEKRVRVSDEKSERKRFEDVNGEERDERRE 1
           ++RV DVNL            RFDEKR RVSDE+ ERKRFEDVNGEER ER E
Sbjct: 68  RERVLDVNLSKRKERGGSEEERFDEKRARVSDERRERKRFEDVNGEERIERDE 120


Top