BLASTX nr result

ID: Angelica27_contig00012152 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00012152
         (393 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017230053.1 PREDICTED: RING finger and transmembrane domain-c...   116   3e-28

>XP_017230053.1 PREDICTED: RING finger and transmembrane domain-containing protein
           1-like [Daucus carota subsp. sativus] XP_017230054.1
           PREDICTED: RING finger and transmembrane
           domain-containing protein 1-like [Daucus carota subsp.
           sativus] KZN12130.1 hypothetical protein DCAR_004786
           [Daucus carota subsp. sativus]
          Length = 460

 Score =  116 bits (291), Expect = 3e-28
 Identities = 58/85 (68%), Positives = 67/85 (78%)
 Frame = -1

Query: 384 SSSNPVRLRYNLSASNLIHTPLLTLLDYFGLLHNSPISPRATASNQEMQALLRNPPPHFH 205
           +SSNPVRLRYNLSASNLIHTPLLTLLDYFGLLHN PISPR   SNQ+MQALLRNPPPHFH
Sbjct: 19  TSSNPVRLRYNLSASNLIHTPLLTLLDYFGLLHNPPISPR--DSNQDMQALLRNPPPHFH 76

Query: 204 DTASAPSXXXGKRDIIV*LQCTIEE 130
              ++PS      ++ + +  + EE
Sbjct: 77  HLDASPSAATSSEEVSIRIIASSEE 101


Top