BLASTX nr result
ID: Angelica27_contig00007951
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica27_contig00007951
(5256 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017252141.1 PREDICTED: DNA-directed RNA polymerase II subunit... 3052 0.0
KZM93495.1 hypothetical protein DCAR_016740 [Daucus carota subsp... 3020 0.0
XP_002285900.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2924 0.0
XP_010266907.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2893 0.0
XP_008806151.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2864 0.0
XP_011099129.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2861 0.0
XP_010935180.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2859 0.0
XP_018807320.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2852 0.0
ONK55404.1 uncharacterized protein A4U43_UnF3880 [Asparagus offi... 2852 0.0
XP_010941355.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2851 0.0
AIO05697.1 DNA-directed RNA polymerase II subunit 1, partial [Co... 2849 0.0
OAY60934.1 hypothetical protein MANES_01G151000 [Manihot esculen... 2843 0.0
XP_002530639.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2840 0.0
XP_010029631.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2839 0.0
XP_020113244.1 DNA-directed RNA polymerase II subunit 1 [Ananas ... 2838 0.0
GAV78585.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1... 2838 0.0
XP_015889758.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2837 0.0
XP_012491472.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2834 0.0
KJB43259.1 hypothetical protein B456_007G190500 [Gossypium raimo... 2834 0.0
XP_012491467.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2834 0.0
>XP_017252141.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Daucus carota
subsp. sativus]
Length = 1843
Score = 3052 bits (7913), Expect = 0.0
Identities = 1514/1535 (98%), Positives = 1525/1535 (99%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEI+SQSQDTDEP+KKSRGGCGAQQPKITI
Sbjct: 121 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIESQSQDTDEPLKKSRGGCGAQQPKITI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVL+VLKRISDEDCMLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCMLLGLNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA
Sbjct: 601 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL
Sbjct: 661 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRFQ 3065
LDSLKMKKNEFDKVFRYEIDDG+WNPSYML +HVEDLKTIREFRNVFDAEVQKLEADRFQ
Sbjct: 901 LDSLKMKKNEFDKVFRYEIDDGNWNPSYMLPDHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 3066 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 3245
LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP
Sbjct: 961 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3246 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 3425
GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3426 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3605
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3606 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 3785
PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTII+EDVDFVKSYYEMPDEEI
Sbjct: 1141 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVDFVKSYYEMPDEEI 1200
Query: 3786 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 3965
DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM
Sbjct: 1201 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 1260
Query: 3966 NDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 4145
NDEAPKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 1320
Query: 4146 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4325
EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4326 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 4505
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440
Query: 4506 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGTP 4685
LRGVTENIMLGQLAPIGTGDCSLYLNEKML+QAIDIQLPSYM+GLDFGMTPARSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLKQAIDIQLPSYMDGLDFGMTPARSPISGTP 1500
Query: 4686 YHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
YHDGMMSP+YMLSPNLR+SPITDAQFSPYVGGMGF
Sbjct: 1501 YHDGMMSPNYMLSPNLRLSPITDAQFSPYVGGMGF 1535
>KZM93495.1 hypothetical protein DCAR_016740 [Daucus carota subsp. sativus]
Length = 2159
Score = 3020 bits (7829), Expect = 0.0
Identities = 1504/1544 (97%), Positives = 1516/1544 (98%), Gaps = 9/1544 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEI+SQSQDTDEP+KKSRGGCGAQQPKITI
Sbjct: 121 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIESQSQDTDEPLKKSRGGCGAQQPKITI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVL+VLKRISDEDCMLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCMLLGLNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL + R DDLTHQLAMIIRHNENLRKQERNGAPAHIIS
Sbjct: 241 PDWMILQVLP----------IPPPPVRPSDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 290
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 291 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 350
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 351 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 410
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYK---------VERHLNDGDFVLFNRQPSLHKMSIMGH 1598
EDGQRLDLRYLKKSSDHHLELGYK VERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 411 EDGQRLDLRYLKKSSDHHLELGYKAIFSSIYVQVERHLNDGDFVLFNRQPSLHKMSIMGH 470
Query: 1599 RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANR 1778
RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANR
Sbjct: 471 RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANR 530
Query: 1779 PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVF 1958
PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVF
Sbjct: 531 PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVF 590
Query: 1959 NLIIPKQINLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVI 2138
NLIIPKQINLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVI
Sbjct: 591 NLIIPKQINLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVI 650
Query: 2139 WEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKEL 2318
WEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKEL
Sbjct: 651 WEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKEL 710
Query: 2319 IRSAQDKDLEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKG 2498
IRSAQDKDLEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKG
Sbjct: 711 IRSAQDKDLEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKG 770
Query: 2499 SFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEF 2678
SFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEF
Sbjct: 771 SFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEF 830
Query: 2679 FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM 2858
FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM
Sbjct: 831 FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM 890
Query: 2859 DAVWIESQKLDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEV 3038
DAVWIESQKLDSLKMKKNEFDKVFRYEIDDG+WNPSYML +HVEDLKTIREFRNVFDAEV
Sbjct: 891 DAVWIESQKLDSLKMKKNEFDKVFRYEIDDGNWNPSYMLPDHVEDLKTIREFRNVFDAEV 950
Query: 3039 QKLEADRFQLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDK 3218
QKLEADRFQLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDK
Sbjct: 951 QKLEADRFQLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDK 1010
Query: 3219 LQERLKVVPGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESR 3398
LQERLKVVPGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESR
Sbjct: 1011 LQERLKVVPGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESR 1070
Query: 3399 FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIK 3578
FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIK
Sbjct: 1071 FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIK 1130
Query: 3579 TPSLSVYLKPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKS 3758
TPSLSVYLKPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTII+EDVDFVKS
Sbjct: 1131 TPSLSVYLKPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVDFVKS 1190
Query: 3759 YYEMPDEEIDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNAD 3938
YYEMPDEEIDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNAD
Sbjct: 1191 YYEMPDEEIDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNAD 1250
Query: 3939 KLILRIRIMNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNR 4118
KLILRIRIMNDEAPKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNR
Sbjct: 1251 KLILRIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNR 1310
Query: 4119 FDENNGFVTEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDE 4298
FDENNGFVTEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDE
Sbjct: 1311 FDENNGFVTEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDE 1370
Query: 4299 LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD 4478
LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD
Sbjct: 1371 LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD 1430
Query: 4479 AAVYAETDYLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTP 4658
AAVYAETDYLRGVTENIMLGQLAPIGTGDCSLYLNEKML+QAIDIQLPSYM+GLDFGMTP
Sbjct: 1431 AAVYAETDYLRGVTENIMLGQLAPIGTGDCSLYLNEKMLKQAIDIQLPSYMDGLDFGMTP 1490
Query: 4659 ARSPISGTPYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
ARSPISGTPYHDGMMSP+YMLSPNLR+SPITDAQFSPYVGGMGF
Sbjct: 1491 ARSPISGTPYHDGMMSPNYMLSPNLRLSPITDAQFSPYVGGMGF 1534
>XP_002285900.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2924 bits (7580), Expect = 0.0
Identities = 1435/1535 (93%), Positives = 1496/1535 (97%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFP+SPAEVAKVRMVQFGILSPDEIRQMSVV IEH ETTERGKPKP GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEED+K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQAQKIRNPKNRLKKILD+CK+K+KCEGGDEI++Q+ D+DEPVKKSRGGCGAQQPK+TI
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
EGMKMIAEYKIQ+KKNDDPEQLPEPVERKQQLSAERVL+VLKRISDEDC+LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L+R SAWH++ ETG ITPGDTQVRIEKGE++ GTLCKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETIS AKN VKELIR+AQ++ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
E EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRFQ 3065
LDSLKMKK EFD+VF+YEIDD +WNPSYML EHVEDLKTIREFRNVFDAEVQKLEADRFQ
Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 3066 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 3245
LGTEI TTGDN+WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3246 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 3425
GDDL+SMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3426 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3605
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3606 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 3785
P+VS +KE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE+
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3786 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 3965
P+KISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3966 NDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 4145
NDEAPKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K N+FDE+ GF
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4146 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4325
E EWMLDTEGVNLLAV+CHE+VDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4326 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 4505
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440
Query: 4506 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGTP 4685
LRGVTENIMLGQLAPIGTGDC+LYLN++MLQ AI++QLPSYMEGLDFGMTP+RSPI+GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYMEGLDFGMTPSRSPITGTP 1500
Query: 4686 YHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
YHDGMMSP+Y+LSPNLR+SPITDAQFSPYVGGM F
Sbjct: 1501 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>XP_010266907.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2893 bits (7500), Expect = 0.0
Identities = 1420/1535 (92%), Positives = 1483/1535 (96%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MD RFP+SPAEV+KVR VQFGILSPD IRQMSVV IEH ETTE+GKPKP GLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEED+K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQAQ+IRNPKNRLKK+LD+CK+KTKCEGGDEI+ Q QDT EP+KK RGGCGAQQPK+TI
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
EGMKMIAEYK Q+KKNDD EQLPEPVERKQQLSAERVLSVLKRISDEDC+LLGLNP+YAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
EDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
LMR SAWH++ ETG ITPGDTQVRIE+GE++TGTLCKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETIS AKN VKELIR+AQ++ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
E EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRFQ 3065
LDSLKM+K+EFDKVFRYEIDD +WNPSYML EHVEDLKTIREFRNVFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 960
Query: 3066 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 3245
LGTEI TTGDN WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP
Sbjct: 961 LGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3246 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 3425
GDD +SMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3426 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3605
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3606 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 3785
P V+ +KE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE+
Sbjct: 1141 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3786 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 3965
P+KISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3966 NDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 4145
NDEAPKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K N+FDE+ GF
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4146 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4325
E EWMLDTEGVNLLAV+CHE+VDA RTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4326 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 4505
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDC 1440
Query: 4506 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGTP 4685
LRGVTENIMLGQLAPIGTGDC+LYLN++MLQQAI++QLPSYMEGLDFGMTP+RSPI GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPIMGTP 1500
Query: 4686 YHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
Y++GMMSPSY+LSPN R+SPITDAQFSPYVGGM F
Sbjct: 1501 YNEGMMSPSYLLSPNARLSPITDAQFSPYVGGMAF 1535
>XP_008806151.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 2864 bits (7425), Expect = 0.0
Identities = 1407/1536 (91%), Positives = 1476/1536 (96%), Gaps = 1/1536 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEHGET ERGKPKP GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQ-DTDEPVKKSRGGCGAQQPKIT 722
FKQA KIRNPK+RLK+I D+CK+K KC GGD+ID Q+Q D++EP+KKSRGGCGAQQP IT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 723 IEGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYA 902
I+GMKMIAEYK KKK+DD EQLPEPVERKQ LSAERVLSVLKRISDEDC+LLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240
Query: 903 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHII 1082
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1083 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1262
+EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1263 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1442
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1443 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1622
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1623 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 1802
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1803 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 1982
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1983 NLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDA 2162
NL+R SAWH++ ETG ITPGDT VRIEKGE+++GTLCK+TLG STGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 2163 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKD 2342
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETIS AKN VKELI+ AQ+K
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2343 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQM 2522
LE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2523 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2702
TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2703 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2882
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2883 KLDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRF 3062
KLDSLKMKK+EFDK F+YEIDD +WNPSYML EHVEDLKTIREFRNVFDAEVQKLEADR+
Sbjct: 901 KLDSLKMKKSEFDKGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 3063 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 3242
QLGTEI TTGDNTWP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 3243 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAP 3422
PGDD +SMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 3423 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3602
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3603 KPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 3782
KP V+ KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 3783 IDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 3962
I P+KISPWLLR++LNREMM+DKKLSMADIAEKIN EF DDLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 3963 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFV 4142
MNDEAPKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K NRFD+N GF
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEGFK 1320
Query: 4143 TEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4322
+ EWMLDTEGVNLLAV+CHE+VDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4323 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4502
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1440
Query: 4503 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGT 4682
YLRGVTENIMLGQLAPIGTGDC+LYLN++MLQQAI++QLPSYMEGLDFGMTP+RSPISGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1500
Query: 4683 PYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
PYH+GMMSPSY+LSPN+R SPITDAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536
>XP_011099129.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 2861 bits (7417), Expect = 0.0
Identities = 1401/1537 (91%), Positives = 1481/1537 (96%), Gaps = 2/1537 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MD+RFP+SPAEVAK+R+VQFGILSPDEIRQMSVVHIEH ETTERGKPKP GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETCMANMA+CPGHFGHLELAKPMFHIGF+KTVLSI+RCVCFNCSKILADEED K
Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQA +IRNPKNRLKKILD+CK+K+KCEGGDEID Q QDTDEPVKK+RGGCGAQQPKI+I
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
+GMKM+AEYKIQKKKNDDPEQ+PEPVERKQQLSAE+VLS+LKRI+DEDC LLGLNPKYAR
Sbjct: 181 DGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L+R SAWH + E G ITPGDTQVRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ FSIGIGDTIADAATMEKINETIS AKN VKELIR+AQ+K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
E EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRFQ 3065
L+SLK+KK +F+ ++RYEID+ +WNP+YML E VEDLKTIRE R+VFDAEVQKLEADR+Q
Sbjct: 901 LESLKLKKADFNDMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960
Query: 3066 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 3245
LGTEI TTGDN+WP+PVN++RL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3246 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 3425
GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3426 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3605
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3606 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 3785
P+VS +KE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3786 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 3965
DPDKISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3966 NDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 4145
NDEAPKG+L DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K N+FDEN GF
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1320
Query: 4146 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4325
E EWMLDTEGVNLLAV+CHE+VDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1380
Query: 4326 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 4505
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 4506 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYME--GLDFGMTPARSPISG 4679
LRGVTENIMLGQLAPIGTGDC+LYLNE+ML+QAI+I LPSYME GL+FGMTPARSP++G
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLTG 1500
Query: 4680 TPYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
TPYHDGMMSPSY+LSPNLR+SP+TDAQFSPYVGGM F
Sbjct: 1501 TPYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAF 1537
>XP_010935180.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 2859 bits (7411), Expect = 0.0
Identities = 1404/1536 (91%), Positives = 1476/1536 (96%), Gaps = 1/1536 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ET ERGKPKP GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQ-DTDEPVKKSRGGCGAQQPKIT 722
FKQA KIRNPK+RLK+I D+CK+K KC GGD+ID Q+Q D++EP+KKSRGGCGAQQP IT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 723 IEGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYA 902
I+GMKMIAEYK KKK+DD EQLPEPVERKQ LSAERVLSVLKRISDEDC+LLGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240
Query: 903 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHII 1082
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1083 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1262
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1263 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1442
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1443 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1622
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1623 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 1802
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1803 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 1982
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1983 NLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDA 2162
NL+R SAWH++ ETG ITPGDT VRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 2163 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKD 2342
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETIS AKN VKELI+ AQ+K
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2343 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQM 2522
LE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2523 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2702
TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2703 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2882
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2883 KLDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRF 3062
KLDSLKMKK++FD+VF+YEIDD +WNPSYML EHVEDLKTIREFRNVFDAEVQKLEADR+
Sbjct: 901 KLDSLKMKKSDFDRVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 3063 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 3242
QLGTEI TTGDNTWP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 3243 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAP 3422
PGDD +SMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 3423 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3602
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3603 KPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 3782
KP V+ KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 3783 IDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 3962
I P+KISPWLLR++LNREMM+DKKLSMADIAEKIN EF DDLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 3963 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFV 4142
MNDEAPKG+LQDESAEDDVFLK+IESNMLTEMALRGIPDINKVFIK K NRFDEN GF
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320
Query: 4143 TEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4322
+ EWMLDTEGVNLLAV+CHE+VDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4323 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4502
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1440
Query: 4503 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGT 4682
+LRGVTENIMLGQLAPIGTGDC+LYLN++MLQQAI++QLPSYMEGL+FGMTP+RSPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLEFGMTPSRSPISGT 1500
Query: 4683 PYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
PYH+GMMSPSY+LSPN+R SPITDAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>XP_018807320.1 PREDICTED: DNA-directed RNA polymerase II subunit 1, partial [Juglans
regia]
Length = 1671
Score = 2852 bits (7394), Expect = 0.0
Identities = 1395/1535 (90%), Positives = 1471/1535 (95%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFP+SPAEVAKVRMVQFGILSPDEIRQMSVV IEH ET ERGKPK +GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETMERGKPKIAGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEED+K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQA KI+NPKNRLKKILD+CK+KTKCEGGDE++ Q QD++EPVKKSRGGCGAQQPK+TI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDELEVQGQDSEEPVKKSRGGCGAQQPKLTI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
EGMKMIAEYK Q+KK+DD EQLPEPVERKQ L+AERVL+VLKRISDEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLNVLKRISDEDCQLLGLNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDT I KDVFMNILMWWEDFDGK+PAPAILKP P WTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTLISKDVFMNILMWWEDFDGKIPAPAILKPGPYWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L R SAWH + ETG ITPGDTQVRIE+GE++ GTLCKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHLESETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGH QWLVNYWLLQ GFSIGIGDTIADAATME INETIS AKN VKELIR AQ ++L
Sbjct: 661 RKFLGHVQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRKAQAREL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
EPEPGRTMM+SFENKVNQ LN+ARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQTLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ+
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQR 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRFQ 3065
LDSLKMKK EF++VFRYE DD WNP YM+ EH+EDLKTIREFRNVFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMKKTEFERVFRYEFDDEQWNPDYMMQEHIEDLKTIREFRNVFDAEVQKLEADRYQ 960
Query: 3066 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 3245
LG EI TTGDN+WP+PVNLKRLIWNAQK FK+D RR SDMHPMEIVEAVDKLQERLKVVP
Sbjct: 961 LGAEIATTGDNSWPLPVNLKRLIWNAQKIFKIDPRRHSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3246 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 3425
G+DL+S+EAQKNATLFF+ILLRSTFASKRVL+EY+LTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDLLSVEAQKNATLFFSILLRSTFASKRVLEEYKLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3426 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3605
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3606 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 3785
P V +KE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFV+SYYEMPDEE+
Sbjct: 1141 PEVCRTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVRSYYEMPDEEV 1200
Query: 3786 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 3965
P+KISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3966 NDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 4145
NDEAPKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQ K N+FDEN+GF
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQCKINKFDENDGFKP 1320
Query: 4146 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4325
E EWMLDTEGVNLLAV+CHE+VD+RRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVMCHEDVDSRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4326 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 4505
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440
Query: 4506 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGTP 4685
LRGVTENIMLGQLAPIGTGDC+LYLN++ML+ AI++QLPSYM+GLDFGMTP+ SP+SGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSHSPVSGTP 1500
Query: 4686 YHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
YH+G+MSPSY+LSPNLR+SPITDAQFSPYVGGM F
Sbjct: 1501 YHEGLMSPSYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>ONK55404.1 uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
Length = 1843
Score = 2852 bits (7392), Expect = 0.0
Identities = 1405/1536 (91%), Positives = 1464/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFPFSPAEVAKVR VQFGILSPDEIRQMSVV +EHGET ERGKPK +GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVAGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEDDVR 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQ-DTDEPVKKSRGGCGAQQPKIT 722
FKQA KIRNPKNRLK+I D+CKSK KC GGD+ID Q Q D+DEPVKKSRGGCGAQQP IT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNIT 180
Query: 723 IEGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYA 902
I+GMKM+AEYK KKK+DDPEQLPEPVERKQQLSAERVLSVLKRISDEDC+LLGLNPKYA
Sbjct: 181 IDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 903 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHII 1082
RPDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1083 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1262
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1263 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1442
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1443 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1622
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1623 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 1802
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1803 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 1982
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1983 NLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDA 2162
NL R SAWH++ ETG ITPGDTQVRIEKGE++TGTLCKKTLG STGSLIHVIWEEVGPDA
Sbjct: 601 NLSRASAWHSESETGFITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 2163 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKD 2342
ARKFLGHTQWLVNYWLLQ FSIGIGDTIADAATMEKINETIS AKN VK+LI+ AQDK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 720
Query: 2343 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQM 2522
LEPEPGRTMMESFENKVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2523 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2702
TACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2703 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2882
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2883 KLDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRF 3062
KLDSLKMKK EF+ V+RYEIDD W+PSYML EHVEDLKTI EFRNVFDAEVQKLEADRF
Sbjct: 901 KLDSLKMKKKEFNNVYRYEIDDNQWDPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRF 960
Query: 3063 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 3242
QLGT+I TTGDNTWPMPVNLKRLIWNAQKTFKVD RRPSDMHPMEIVEAVDKLQE+L+VV
Sbjct: 961 QLGTDIATTGDNTWPMPVNLKRLIWNAQKTFKVDPRRPSDMHPMEIVEAVDKLQEKLRVV 1020
Query: 3243 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAP 3422
PGDD +SMEAQKNATL FNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 3423 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3602
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1140
Query: 3603 KPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 3782
KP +S KE AKNVQCALEYTTLRSVT ATEVWYDP+PMSTIIEEDVDFV SYYEMPDEE
Sbjct: 1141 KPEISKKKELAKNVQCALEYTTLRSVTHATEVWYDPNPMSTIIEEDVDFVNSYYEMPDEE 1200
Query: 3783 IDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 3962
+ P+KISPWLLR++LNREMM+DKKLSMADIAEKIN EFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 3963 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFV 4142
MND+APKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K NRFDEN GF
Sbjct: 1261 MNDDAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320
Query: 4143 TEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4322
+ EW LDTEGVNLLAV+CHE+VD RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 PDVEWTLDTEGVNLLAVMCHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1380
Query: 4323 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4502
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 1440
Query: 4503 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGT 4682
+LRGVTENIMLGQLAPIGTG C+LYLN++MLQQAI++QLPSYMEGLDFGMTPARSPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPISGT 1500
Query: 4683 PYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
PYH+G+MSPSY+LSPN+R SP TDAQFSPYV M F
Sbjct: 1501 PYHEGIMSPSYLLSPNIRSSPFTDAQFSPYVNNMPF 1536
>XP_010941355.1 PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 2851 bits (7391), Expect = 0.0
Identities = 1400/1536 (91%), Positives = 1471/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MD+RFP+SPAEVAKVR VQFGILSPDEIRQMSV IEHGET ERGKPKP GLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQ-DTDEPVKKSRGGCGAQQPKIT 722
FKQA KIRNPK+RLK+I D+CKSK KC GGD++D Q+Q D++EP+KKSRGGCG+QQP IT
Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180
Query: 723 IEGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYA 902
I+GMKM+AEYK KKK+DD +QLPEPVERKQ LSA+RVLSVLKRISDEDC+LLGLNP+YA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQYA 240
Query: 903 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHII 1082
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1083 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1262
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1263 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1442
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1443 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1622
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1623 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 1802
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1803 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 1982
TLLGCRKITKRDTFIE DVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEMDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1983 NLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDA 2162
NL+R SAWH++ ETG ITPGDT VRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 2163 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKD 2342
ARKFLGHTQWLVNYWLLQ GFS+GIGDTIADA TMEKINETIS AKN VKELI+ AQ+K
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSMGIGDTIADAVTMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2343 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQM 2522
LE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2523 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2702
TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2703 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2882
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2883 KLDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRF 3062
KLDSLKMKK+EFDK+FRYEIDD +WNPSYML EHVEDLKTIREF+NVFDAEVQKLEADR+
Sbjct: 901 KLDSLKMKKSEFDKIFRYEIDDNNWNPSYMLPEHVEDLKTIREFKNVFDAEVQKLEADRY 960
Query: 3063 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 3242
QLGTEI TTGDNTWPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIVTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 3243 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAP 3422
PGDD +SMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 3423 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3602
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3603 KPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 3782
KP V+ KE AKNVQ ALEYTTLRSVT ATEVWYDPDPMSTIIEEDV+FVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQTALEYTTLRSVTHATEVWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 3783 IDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 3962
I P+KISPWLLRV+LNREMM+DKKLSMADIAEKIN EF D+TCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRVELNREMMVDKKLSMADIAEKINHEFGSDITCIFNDDNADKLILRIRI 1260
Query: 3963 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFV 4142
MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K NRFDE GF
Sbjct: 1261 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDETEGFK 1320
Query: 4143 TEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4322
+ EWMLDTEGVNLLAV+CHE+VDA RTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380
Query: 4323 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4502
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVY+E D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYSEAD 1440
Query: 4503 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGT 4682
+LRGVTENIMLGQLAPIGTGDC+LYLN++MLQQAI++QLPSYMEGLDFGMTP+RSPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1500
Query: 4683 PYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
PYH+GMMSPSY+LSPN+R SPITDAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536
>AIO05697.1 DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 2849 bits (7385), Expect = 0.0
Identities = 1401/1536 (91%), Positives = 1470/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MD RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ET ERGKPKP GLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQ-DTDEPVKKSRGGCGAQQPKIT 722
FKQA KIRNPK+RLK+I D+CK+K KC GGD+ID Q+Q D++EP+KKSRGGCGAQQP IT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 723 IEGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYA 902
I+GMKMIAEYK KKK+DD EQLPEPVERKQ LSAERVLSVLKRISDEDC+LLGLNPKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 903 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHII 1082
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1083 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1262
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1263 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1442
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1443 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1622
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1623 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 1802
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1803 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 1982
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1983 NLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDA 2162
NL+R SAWH++ ETG ITPGDT VRIEKG +++GTLCK+TLG STGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGXLLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 2163 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKD 2342
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETIS AKN VKELI+ AQ+K
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2343 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQM 2522
LE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2523 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2702
TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2703 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2882
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2883 KLDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRF 3062
KLDSLKMKK+EFDK F+YEIDD +WNPSYML EHVEDLKTIREFRNVFDAEVQKLEADR+
Sbjct: 901 KLDSLKMKKSEFDKFFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 3063 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 3242
QLGTEI TTGDNTWP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 3243 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAP 3422
PGDD +SMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 3423 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3602
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3603 KPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 3782
K V+ KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPDE+
Sbjct: 1141 KSEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 3783 IDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 3962
I P+KISPWLLR++LNREMM+DKKLSMADIAEKIN EF DDLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 3963 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFV 4142
MNDE PKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K NRFDEN+GF
Sbjct: 1261 MNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENDGFK 1320
Query: 4143 TEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4322
+ EWMLDTEGVNLLAV+CHE+VDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4323 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4502
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVD LLDAAV+AETD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDXLLDAAVFAETD 1440
Query: 4503 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGT 4682
+LRGVTENIMLGQLAPIGTGDC+LYLN++MLQ AI++QLPSYMEGLDFGMTP+RSPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQXAIELQLPSYMEGLDFGMTPSRSPISGT 1500
Query: 4683 PYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
PYH+GMMSPSY+LSPN+R SPITDAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>OAY60934.1 hypothetical protein MANES_01G151000 [Manihot esculenta] OAY60935.1
hypothetical protein MANES_01G151000 [Manihot esculenta]
Length = 1858
Score = 2843 bits (7371), Expect = 0.0
Identities = 1394/1535 (90%), Positives = 1470/1535 (95%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFP+SPAEVAKVRMVQFGI+ PDEIRQMSVV IEH ETTERGKPKP GLSDP+LGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGIIGPDEIRQMSVVQIEHSETTERGKPKPGGLSDPKLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEED+K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQA KIRNPKNRLKKILD+ K+K KCEGGDEID Q QDT+EPVKKSRGGCGAQQPK+TI
Sbjct: 121 FKQALKIRNPKNRLKKILDASKNKAKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLTI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
EGMKMIAEYK Q+KKNDD EQLPEPVERKQ L+AE+VLSVLKRISDEDC LLG NPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAEKVLSVLKRISDEDCQLLGFNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTHQLAM+IRHNENL+KQER GAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKKQERGGAPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L+R +AWH D E G ITPGDT VRIEKGE+I+GTLCKK LG STGSLIHVIWEEVGPDAA
Sbjct: 601 LIRTAAWHTDTERGIITPGDTLVRIEKGELISGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETIS AKN VKELI AQ+K+L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISLAKNEVKELITKAQNKEL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
E EPGRTMMESFENKVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRFQ 3065
LDSLKMKK+EF++VFRYEIDD +WNPSYM+++H+EDLK IRE R+VFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMKKSEFNRVFRYEIDDENWNPSYMMSDHIEDLKNIRELRDVFDAEVQKLEADRYQ 960
Query: 3066 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 3245
LGTEI TTGDN+WP+PVNL RLIWNAQKTFKVD RRPSD+HPME VEAVDKLQERLKVVP
Sbjct: 961 LGTEIATTGDNSWPLPVNLMRLIWNAQKTFKVDTRRPSDIHPMEAVEAVDKLQERLKVVP 1020
Query: 3246 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 3425
G+D +S+EAQKNATLFF ILLRST ASKRVL+EYRLTREAFDWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFGILLRSTLASKRVLEEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3426 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3605
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLV 1140
Query: 3606 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 3785
P + +KEKAK+VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE+
Sbjct: 1141 PECNKTKEKAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3786 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 3965
P+KISPWLLR++LNREMM+DKKL+MADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLNMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3966 NDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 4145
NDEAPKG+L DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++FDEN+GF T
Sbjct: 1261 NDEAPKGELSDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVSKFDENDGFKT 1320
Query: 4146 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4325
EWMLDTEGVNLLAV+C+E VDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 MEEWMLDTEGVNLLAVMCNENVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4326 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 4505
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AETD+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVFAETDH 1440
Query: 4506 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGTP 4685
LRGVTENIMLGQLAPIGTG CSLYLN++ML+ AI++QLPSYM+GLDFGMTPARSP+SGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCSLYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPVSGTP 1500
Query: 4686 YHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
YH+GMMSPSY+LSP+LR+SPITDAQFSPYVGGM F
Sbjct: 1501 YHEGMMSPSYLLSPSLRLSPITDAQFSPYVGGMAF 1535
>XP_002530639.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Ricinus
communis] EEF31747.1 DNA-directed RNA polymerase II
largest subunit, putative [Ricinus communis]
Length = 1855
Score = 2840 bits (7362), Expect = 0.0
Identities = 1393/1535 (90%), Positives = 1469/1535 (95%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFP+SPAEVAKVRMVQFGILSPDEIRQMSVV IE ETTERGKPKP GLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEFSETTERGKPKPGGLSDLRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEED+K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQA KI+NPKNRLKKILD+CK+KTKCEGGD+ID SQDTDEPVKKSRGGCGAQQP++TI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
EGMKMIAEYK Q+KKNDD EQLPEPVERKQ L+AERVL VLKRISD+DC LLG NPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+KQE+ GAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L+R +AWH+D E G ITPGDT VRIEKGE+++GT+CKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LIRTAAWHSDSERGVITPGDTLVRIEKGELLSGTVCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETIS AKNAVKELIR AQ+K+L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNAVKELIRKAQNKEL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
EP+PGRTMMESFEN+VNQVLN+ARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPKPGRTMMESFENEVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRFQ 3065
LDSLKMKK+EFD+VF+YE+DD +WNP+YM +H++DLK IRE R+VFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMKKSEFDRVFKYELDDENWNPTYMYQDHIDDLKNIRELRDVFDAEVQKLEADRYQ 960
Query: 3066 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 3245
LGTEI TTGD++WP+PVNL+RLIWNAQKTFKVD RRPSD+HPME VEAVDKLQERLKVVP
Sbjct: 961 LGTEIATTGDSSWPLPVNLRRLIWNAQKTFKVDKRRPSDIHPMEAVEAVDKLQERLKVVP 1020
Query: 3246 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 3425
GDD +S+EAQKNATLFF ILLRST ASKRVL++YRLTREAFDWVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDPLSVEAQKNATLFFGILLRSTLASKRVLEDYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3426 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3605
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS++L
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIFLI 1140
Query: 3606 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 3785
P + +KE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI
Sbjct: 1141 PECNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1200
Query: 3786 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 3965
P+KISPWLLR++LNREMM+DKKL+MADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLNMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3966 NDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 4145
NDEAPKG+L DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQ K ++FDEN GF T
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQSKVSKFDENEGFKT 1320
Query: 4146 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4325
EWMLDTEGVNLLAV+C+E VDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 IEEWMLDTEGVNLLAVMCNENVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4326 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 4505
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE DY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEADY 1440
Query: 4506 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGTP 4685
LRGVTENIMLGQLAPIGTGDC+LYLN+ ML+ AI++QLPSYM+GLDFGMTPARSP+S TP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDDMLKNAIELQLPSYMDGLDFGMTPARSPVSVTP 1500
Query: 4686 YHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
YHDGMMSPSY+LSP+LR+SP TDAQFSPYV GM F
Sbjct: 1501 YHDGMMSPSYLLSPSLRLSPTTDAQFSPYVSGMPF 1535
>XP_010029631.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Eucalyptus
grandis] KCW56573.1 hypothetical protein EUGRSUZ_I02304
[Eucalyptus grandis]
Length = 1852
Score = 2839 bits (7359), Expect = 0.0
Identities = 1387/1535 (90%), Positives = 1469/1535 (95%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEHGETTERGKPK +GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKIL DE+D+K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILTDEDDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQA +IRNPKNRLKKILD+CK+K+KC+GGD++D++ Q ++EP KK+ GGCGAQQPK+TI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCDGGDDVDTKGQGSEEPKKKNHGGCGAQQPKLTI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
EGMKMIAEYK Q+KKNDD +Q+PEPVERKQ LSAERVLSVLKRISDE C LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQDQIPEPVERKQTLSAERVLSVLKRISDEHCQLLGLNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMN+LMWWEDFDGKVP PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNVLMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L+R SAWH++ ETG ITPGDTQVRIEKGE+++GTLCKK LG STGSLIHVIWEEVGPDAA
Sbjct: 601 LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETIS+AK+ VK LI+ AQ+K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISSAKDEVKRLIKDAQEKKL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
EPEPGRTMMESFENKVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRFQ 3065
LDSLKMKK EFD+VFRYEIDD +WNP YML E+ EDL++I E R+VFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMKKTEFDRVFRYEIDDENWNPDYMLPENAEDLRSIGELRDVFDAEVQKLEADRYQ 960
Query: 3066 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 3245
LGTEI TTGDNTWP+PVNLKRLIWNAQKTFK+DLRRPSD+HP+E+VEA+DKLQERLKVVP
Sbjct: 961 LGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDIHPVEVVEAIDKLQERLKVVP 1020
Query: 3246 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 3425
G+D +S+EAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3426 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3605
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3606 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 3785
P VS +KE AK VQCALEYTTLRSVTQATEVWYDPDP ST IEED+DFVKSY EMPDEEI
Sbjct: 1141 PEVSKTKENAKTVQCALEYTTLRSVTQATEVWYDPDPTSTRIEEDIDFVKSYIEMPDEEI 1200
Query: 3786 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 3965
P+KISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDL CIFNDDNADKLILRIRIM
Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIM 1260
Query: 3966 NDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 4145
NDE PKG+L DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K N+F+EN+GF
Sbjct: 1261 NDEVPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFNENDGFKP 1320
Query: 4146 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4325
E EWMLDTEGVNLLAV+CHE VDA RTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEGVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4326 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 4505
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+DY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDY 1440
Query: 4506 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGTP 4685
LRGVTENIMLGQLAPIGTGDC+LYLN++ML+ AI++QLPSYM+GLDFGMTPARSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKHAIELQLPSYMDGLDFGMTPARSPISGTP 1500
Query: 4686 YHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
YH+GMMSPSY+LSPNLR+SP TDAQFSPYVGGM F
Sbjct: 1501 YHEGMMSPSYLLSPNLRLSPTTDAQFSPYVGGMAF 1535
>XP_020113244.1 DNA-directed RNA polymerase II subunit 1 [Ananas comosus] OAY68410.1
DNA-directed RNA polymerase II subunit rpb1 [Ananas
comosus]
Length = 1854
Score = 2838 bits (7357), Expect = 0.0
Identities = 1394/1536 (90%), Positives = 1467/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFPFSPAEVAKVR VQFGILSPDEIRQMSVV IEH ET ERGKPKP GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVL+IMRCVCFNCSKILADE+D +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQ-DTDEPVKKSRGGCGAQQPKIT 722
FKQA KIRNPKNRLK+I D+CKSK +C GGD+ID Q Q DTDEPVKKSRGGCGAQQP IT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKRCAGGDDIDVQGQQDTDEPVKKSRGGCGAQQPNIT 180
Query: 723 IEGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYA 902
++GMKM+AE+K KKK+DD EQLPEPVERKQ LSAERVL+VLKRISDEDC+LLGLNPKYA
Sbjct: 181 VDGMKMVAEFKASKKKSDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYA 240
Query: 903 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHII 1082
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1083 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1262
+EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1263 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1442
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1443 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1622
REDGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDQHLELGYKVERHLQDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1623 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 1802
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1803 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 1982
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 1983 NLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDA 2162
NL+R SAWH + ETG ITPGDT VRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHLESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 2163 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKD 2342
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETIS AKN VKELI+ AQ+K
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIKLAQEKQ 720
Query: 2343 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQM 2522
LE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2523 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2702
TACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2703 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2882
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2883 KLDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRF 3062
KLDSLKMKK+EFD VF YEIDD +WNPSYML EHV+DLK+I+EFRNVF+AEVQKLEADR
Sbjct: 901 KLDSLKMKKSEFDNVFTYEIDDPNWNPSYMLPEHVDDLKSIKEFRNVFEAEVQKLEADRI 960
Query: 3063 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 3242
QLGTEI TTGDNTWPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 3243 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAP 3422
PGDDLMS+EAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 3423 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3602
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3603 KPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 3782
KP ++ KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ T+IEEDV+FVKSYYEMPDE+
Sbjct: 1141 KPEINKKKEMAKNVQCALEYTTLRSVTHATEIWYDPDPLGTLIEEDVEFVKSYYEMPDED 1200
Query: 3783 IDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 3962
I P+KISPWLLR++LNREMM+DKKLSMADIAEKIN EFDDDLTCIFNDDNADKLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1260
Query: 3963 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFV 4142
MNDEAPKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDI+KVFIK K NRFD++ GF
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDIHKVFIKSGKVNRFDKSEGFK 1320
Query: 4143 TEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4322
+ EWMLDTEGVNLLAV+CHE+VDA RTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1321 PDVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380
Query: 4323 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4502
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1440
Query: 4503 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGT 4682
+LRGVTENIMLGQLAPIGTG CSLYLN++MLQQAI++QLPSY+EGL+FGMTPARSPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGGCSLYLNDQMLQQAIELQLPSYIEGLEFGMTPARSPISGT 1500
Query: 4683 PYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
PYH+ MMSPSY +SPN+R SPITDAQFSPYVGGM F
Sbjct: 1501 PYHESMMSPSYFMSPNVRSSPITDAQFSPYVGGMVF 1536
>GAV78585.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_7
domain-containing protein/RNA_pol_Rpb1_6
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_5
domain-containing protein/RNA_pol_Rpb1_4
domain-containing protein/RNA_pol_Rpb1_R
domain-containing protein [Cephalotus follicularis]
Length = 1840
Score = 2838 bits (7356), Expect = 0.0
Identities = 1392/1536 (90%), Positives = 1469/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MDMRFP+SPAEVAKVRMVQFGILSPDEIRQMSVVHIEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHSETTERGKPKTGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMR +CFNCSKILADEED+K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSICFNCSKILADEEDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQA KI+NPKNRLKKILD+CK+KTKCEGGDEID Q QDT+EPVKKSRGGCGAQQPK+TI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLTI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
EGMKMIAEYK Q+KKNDD EQLPEPVERKQ L+AERVL++LKRISDEDC LLGL+PKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLNILKRISDEDCQLLGLDPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLRKQERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGSPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRP+WTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPIWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L+R SAWH D E G +TPGDTQVRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LVRFSAWHNDNERGVLTPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATME INETI+ AKN VK IR AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETITNAKNEVKNYIREAQSKTL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
E EPGRTMMESFENKVNQVLNKARD+AGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENKVNQVLNKARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIPYGF+DRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFLDRTLPHFTKDDNGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQT 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRFQ 3065
LDSLKM K++FD+VFRYEI+D +WNPSY+L EH+EDL+ I+E R+VFDAEV KLEADR+Q
Sbjct: 901 LDSLKMVKSDFDRVFRYEINDVNWNPSYILPEHLEDLRNIQELRDVFDAEVHKLEADRYQ 960
Query: 3066 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 3245
LGTEI TTGDN+WPMPVNL+RLIWNAQKTFKVDLRRPSDMHP+EIVEA+DKLQERLKVVP
Sbjct: 961 LGTEIATTGDNSWPMPVNLRRLIWNAQKTFKVDLRRPSDMHPVEIVEAIDKLQERLKVVP 1020
Query: 3246 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 3425
G+DL+SMEAQKNATLFF ILLRSTFASKRVL+EYRLTREAF+WV+GEIESRFLQSLVAPG
Sbjct: 1021 GEDLLSMEAQKNATLFFGILLRSTFASKRVLQEYRLTREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3426 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3605
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLN 1140
Query: 3606 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 3785
P VS +KE+AKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEEDV+FVKSYYEMPDEE+
Sbjct: 1141 PEVSKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEV 1200
Query: 3786 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 3965
P+KISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 VPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3966 NDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 4145
NDEAPKG+L DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K RFD++ GF
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKITRFDDDEGFNK 1320
Query: 4146 E-PEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4322
EWMLDTEGVNLLAV+CHE+VDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 HMEEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4323 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4502
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1440
Query: 4503 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGT 4682
YLRGVTENIMLGQLAPIGTGDC+LYLN++ML+ AI++QLPSYM+GLDFGMTPARSP+SGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPVSGT 1500
Query: 4683 PYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
P+H+GMMSP Y+LSPNLR+SPITDAQFSPYVGGM F
Sbjct: 1501 PFHEGMMSPGYLLSPNLRLSPITDAQFSPYVGGMAF 1536
>XP_015889758.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Ziziphus jujuba]
Length = 1851
Score = 2837 bits (7355), Expect = 0.0
Identities = 1385/1535 (90%), Positives = 1471/1535 (95%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MD+RFPFSPAE+AKVRMVQFGILSPDEIRQMSV+ IEH ET GKPKP+GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRK+KC+TC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKIL DEED+K
Sbjct: 61 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQA +I+NPKNRLKKILD+CK+KTKCEGGDEI Q Q+++EPVKKSRGGCGAQQPK +I
Sbjct: 121 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPVKKSRGGCGAQQPKFSI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
+GMKMIAEYK Q+KK+DD EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PKYAR
Sbjct: 181 DGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCELLGLDPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L R S+WH++ ETGHITPGDT VRIEKGE++ GTLCKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKINETI+ AKN VKELIR AQ +DL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQARDL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
E EPGRTMMESFENKVNQVLN+ARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNPSYMLTEHVEDLKTIREFRNVFDAEVQKLEADRFQ 3065
LDSLKMKK EFD+VF+YE DD +WNP+YM+ EH++DLKTIREFRNVFDAEVQKL+ DRFQ
Sbjct: 901 LDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTDRFQ 960
Query: 3066 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 3245
LGTEI TTGDN+WP+PVNLKRLI NAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP
Sbjct: 961 LGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3246 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 3425
GDDL+S+EAQKNATLFFNILLRSTFASKRVL+EYRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDLLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3426 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3605
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3606 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 3785
P + +KE+AKNVQCALEYTTLRSVTQATEVWYDPDP ST+IEEDVDFV+SYYEMPDEEI
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPTSTLIEEDVDFVRSYYEMPDEEI 1200
Query: 3786 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 3965
+PDKISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3966 NDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 4145
NDE+PKGD+ DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K N+FDE GF
Sbjct: 1261 NDESPKGDMNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFDEIEGFKP 1320
Query: 4146 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4325
E EWMLDTEGVNLLAV+CHE+VDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4326 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 4505
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE DY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAERDY 1440
Query: 4506 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGTP 4685
LRGVTENIMLGQLAPIGTGDCSLYLN++ML+ AI++QLPSYM+GLDFGMTP+RSP+SGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP 1500
Query: 4686 YHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
YH+G+MSPSY+LSPNLR+SPI+DAQFSPYVGGM F
Sbjct: 1501 YHEGLMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>XP_012491472.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 2834 bits (7347), Expect = 0.0
Identities = 1389/1536 (90%), Positives = 1472/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEED+K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQA KI+NPKNRLKKILD+CK+KTKCEGGDEID Q QD +EPVKKSRGGCGAQQPK+TI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
+GMKMIAEYK Q+KKNDDPEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L+R SAWH++ ETG ITPGDTQVRIEKGEV++GTLCKKTLG S+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKINETIS AK+ VK+LI AQ+KDL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
EPEPGRTMMESFENKVNQVLNKARDDAG+SA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNP-SYMLTEHVEDLKTIREFRNVFDAEVQKLEADRF 3062
LDSLKMKK+EFD+VFRY+IDD +WNP SYML EH+EDL+TI+E R+VFDAEV KLEADR+
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 3063 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 3242
QLGTEI TGD+ WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 3243 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAP 3422
PG D +S+EAQKNATLFF ILLRST ASKRVL+EYRLT+EAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 3423 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3602
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3603 KPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 3782
P S +KEKAKNVQCALEYTTLRSVT ATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200
Query: 3783 IDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 3962
+ P+KISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 3963 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFV 4142
MNDEAPKG+L DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++FDE +G+
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 4143 TEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4322
T EW+LDTEGVNLLAV+CHE+VDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4323 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4502
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440
Query: 4503 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGT 4682
YLRGVTENIMLGQLAPIGTGDC+LYLN++ML+ AI++QLPSYMEGL+FGMTPARSP+SGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500
Query: 4683 PYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
PYH+GMMSPSY+LSPNLR+SPI+DAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536
>KJB43259.1 hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1809
Score = 2834 bits (7347), Expect = 0.0
Identities = 1389/1536 (90%), Positives = 1472/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEED+K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQA KI+NPKNRLKKILD+CK+KTKCEGGDEID Q QD +EPVKKSRGGCGAQQPK+TI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
+GMKMIAEYK Q+KKNDDPEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L+R SAWH++ ETG ITPGDTQVRIEKGEV++GTLCKKTLG S+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKINETIS AK+ VK+LI AQ+KDL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
EPEPGRTMMESFENKVNQVLNKARDDAG+SA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNP-SYMLTEHVEDLKTIREFRNVFDAEVQKLEADRF 3062
LDSLKMKK+EFD+VFRY+IDD +WNP SYML EH+EDL+TI+E R+VFDAEV KLEADR+
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 3063 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 3242
QLGTEI TGD+ WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 3243 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAP 3422
PG D +S+EAQKNATLFF ILLRST ASKRVL+EYRLT+EAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 3423 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3602
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3603 KPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 3782
P S +KEKAKNVQCALEYTTLRSVT ATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200
Query: 3783 IDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 3962
+ P+KISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 3963 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFV 4142
MNDEAPKG+L DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++FDE +G+
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 4143 TEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4322
T EW+LDTEGVNLLAV+CHE+VDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4323 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4502
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440
Query: 4503 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGT 4682
YLRGVTENIMLGQLAPIGTGDC+LYLN++ML+ AI++QLPSYMEGL+FGMTPARSP+SGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500
Query: 4683 PYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
PYH+GMMSPSY+LSPNLR+SPI+DAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536
>XP_012491467.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] XP_012491468.1 PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] XP_012491470.1 PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] XP_012491471.1 PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] KJB43255.1 hypothetical protein
B456_007G190500 [Gossypium raimondii] KJB43256.1
hypothetical protein B456_007G190500 [Gossypium
raimondii] KJB43258.1 hypothetical protein
B456_007G190500 [Gossypium raimondii]
Length = 1846
Score = 2834 bits (7347), Expect = 0.0
Identities = 1389/1536 (90%), Positives = 1472/1536 (95%), Gaps = 1/1536 (0%)
Frame = +3
Query: 186 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 365
MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 366 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 545
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADEED+K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 546 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIDSQSQDTDEPVKKSRGGCGAQQPKITI 725
FKQA KI+NPKNRLKKILD+CK+KTKCEGGDEID Q QD +EPVKKSRGGCGAQQPK+TI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 726 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 905
+GMKMIAEYK Q+KKNDDPEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYAR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 906 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 1085
PDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1086 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1265
EFAQLLQFHVATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1266 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1445
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1446 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1625
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 1626 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1805
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1806 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 1985
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1986 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 2165
L+R SAWH++ ETG ITPGDTQVRIEKGEV++GTLCKKTLG S+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 2166 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 2345
RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKINETIS AK+ VK+LI AQ+KDL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 2346 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 2525
EPEPGRTMMESFENKVNQVLNKARDDAG+SA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2526 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2705
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2706 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2885
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2886 LDSLKMKKNEFDKVFRYEIDDGHWNP-SYMLTEHVEDLKTIREFRNVFDAEVQKLEADRF 3062
LDSLKMKK+EFD+VFRY+IDD +WNP SYML EH+EDL+TI+E R+VFDAEV KLEADR+
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 3063 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 3242
QLGTEI TGD+ WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 3243 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAP 3422
PG D +S+EAQKNATLFF ILLRST ASKRVL+EYRLT+EAF+WVIGEIESRFLQSLVAP
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 3423 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3602
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3603 KPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 3782
P S +KEKAKNVQCALEYTTLRSVT ATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200
Query: 3783 IDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 3962
+ P+KISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 3963 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFV 4142
MNDEAPKG+L DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++FDE +G+
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 4143 TEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4322
T EW+LDTEGVNLLAV+CHE+VDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4323 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 4502
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440
Query: 4503 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLQQAIDIQLPSYMEGLDFGMTPARSPISGT 4682
YLRGVTENIMLGQLAPIGTGDC+LYLN++ML+ AI++QLPSYMEGL+FGMTPARSP+SGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500
Query: 4683 PYHDGMMSPSYMLSPNLRMSPITDAQFSPYVGGMGF 4790
PYH+GMMSPSY+LSPNLR+SPI+DAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536