BLASTX nr result
ID: Angelica27_contig00004996
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica27_contig00004996
(570 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017241149.1 PREDICTED: DNA-directed RNA polymerase III subuni... 295 6e-99
XP_017223790.1 PREDICTED: DNA-directed RNA polymerase III subuni... 225 2e-71
XP_017223786.1 PREDICTED: DNA-directed RNA polymerase III subuni... 225 2e-71
CDP07151.1 unnamed protein product [Coffea canephora] 186 5e-55
XP_019235503.1 PREDICTED: DNA-directed RNA polymerase III subuni... 181 5e-54
XP_011080605.1 PREDICTED: DNA-directed RNA polymerase III subuni... 180 9e-54
XP_016475504.1 PREDICTED: DNA-directed RNA polymerase III subuni... 177 8e-53
XP_009774782.1 PREDICTED: DNA-directed RNA polymerase III subuni... 177 8e-53
XP_015872858.1 PREDICTED: DNA-directed RNA polymerase III subuni... 177 1e-52
XP_009625703.1 PREDICTED: DNA-directed RNA polymerase III subuni... 176 2e-52
XP_009620517.1 PREDICTED: DNA-directed RNA polymerase III subuni... 176 3e-52
XP_011081983.1 PREDICTED: DNA-directed RNA polymerase III subuni... 175 6e-52
XP_002266428.1 PREDICTED: DNA-directed RNA polymerase III subuni... 175 6e-52
XP_003635403.1 PREDICTED: DNA-directed RNA polymerase III subuni... 174 1e-51
XP_010647482.1 PREDICTED: DNA-directed RNA polymerase III subuni... 174 1e-51
XP_016567954.1 PREDICTED: DNA-directed RNA polymerase III subuni... 174 2e-51
XP_016566434.1 PREDICTED: DNA-directed RNA polymerase III subuni... 174 2e-51
XP_016567955.1 PREDICTED: DNA-directed RNA polymerase III subuni... 173 3e-51
XP_009785680.1 PREDICTED: DNA-directed RNA polymerase III subuni... 173 6e-51
CBI33284.3 unnamed protein product, partial [Vitis vinifera] 174 7e-51
>XP_017241149.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Daucus
carota subsp. sativus] XP_017241156.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6 [Daucus
carota subsp. sativus] KZN09540.1 hypothetical protein
DCAR_002196 [Daucus carota subsp. sativus]
Length = 239
Score = 295 bits (754), Expect = 6e-99
Identities = 152/190 (80%), Positives = 159/190 (83%), Gaps = 2/190 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVT--LGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MS+LQDSMALKRKRG Q T LG+ DRNILA ++GKEDLGISIAELRR S LPANQLN
Sbjct: 1 MSQLQDSMALKRKRGSQGPGTQSLGETDRNILALVRGKEDLGISIAELRRASNLPANQLN 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K IKTLITGQLIKEVPNIKYKGGKHYM AEFEPSKELTGGEWYADGKLNQ+LIEFLKSTC
Sbjct: 61 KAIKTLITGQLIKEVPNIKYKGGKHYMGAEFEPSKELTGGEWYADGKLNQDLIEFLKSTC 120
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
KKI+ KLKVATAKGVH QI QIL SMVLDNEILEVKSNGLAEYHS
Sbjct: 121 KKIVAKLKVATAKGVHEFFVKYKVFKEDVSGQQIAQILNSMVLDNEILEVKSNGLAEYHS 180
Query: 539 IPVGEICYRC 568
IPVGE+CYRC
Sbjct: 181 IPVGEVCYRC 190
>XP_017223790.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Daucus carota subsp. sativus]
Length = 237
Score = 225 bits (573), Expect = 2e-71
Identities = 116/190 (61%), Positives = 141/190 (74%), Gaps = 3/190 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVT--LGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR+QD++AL+R+RG Q+ T LGD DRN+L ++GKE GIS EL+RVS LP +QLN
Sbjct: 1 MSRMQDTLALERRRGRQNLFTQSLGDADRNVLNIVRGKETRGISSGELKRVSNLPTSQLN 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
KTIK LI QLIKEVPN++ GKHYM E+EPS ELTGG WYA+GKL+Q+LI F + TC
Sbjct: 61 KTIKALIASQLIKEVPNVRSTYGKHYMGVEYEPSTELTGGSWYANGKLDQDLINFFRGTC 120
Query: 359 KKII-IKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYH 535
+I+ KLKVATA+GVH I +IL+S+VLDNEILEVKS GLAEYH
Sbjct: 121 LQILQKKLKVATAEGVHSFFAKAKFYKGDVSREMIAEILRSLVLDNEILEVKSTGLAEYH 180
Query: 536 SIPVGEICYR 565
SIPVGE+CYR
Sbjct: 181 SIPVGEVCYR 190
>XP_017223786.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Daucus carota subsp. sativus] XP_017223787.1
PREDICTED: DNA-directed RNA polymerase III subunit
RPC6-like isoform X1 [Daucus carota subsp. sativus]
XP_017223788.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC6-like isoform X1 [Daucus carota subsp.
sativus] XP_017223789.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC6-like isoform X1 [Daucus
carota subsp. sativus] KZM83332.1 hypothetical protein
DCAR_030901 [Daucus carota subsp. sativus]
Length = 240
Score = 225 bits (573), Expect = 2e-71
Identities = 116/190 (61%), Positives = 141/190 (74%), Gaps = 3/190 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVT--LGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR+QD++AL+R+RG Q+ T LGD DRN+L ++GKE GIS EL+RVS LP +QLN
Sbjct: 1 MSRMQDTLALERRRGRQNLFTQSLGDADRNVLNIVRGKETRGISSGELKRVSNLPTSQLN 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
KTIK LI QLIKEVPN++ GKHYM E+EPS ELTGG WYA+GKL+Q+LI F + TC
Sbjct: 61 KTIKALIASQLIKEVPNVRSTYGKHYMGVEYEPSTELTGGSWYANGKLDQDLINFFRGTC 120
Query: 359 KKII-IKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYH 535
+I+ KLKVATA+GVH I +IL+S+VLDNEILEVKS GLAEYH
Sbjct: 121 LQILQKKLKVATAEGVHSFFAKAKFYKGDVSREMIAEILRSLVLDNEILEVKSTGLAEYH 180
Query: 536 SIPVGEICYR 565
SIPVGE+CYR
Sbjct: 181 SIPVGEVCYR 190
>CDP07151.1 unnamed protein product [Coffea canephora]
Length = 334
Score = 186 bits (472), Expect = 5e-55
Identities = 97/189 (51%), Positives = 127/189 (67%), Gaps = 2/189 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSV--TLGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR ++ +LKRKR SS +L D DR + I+ KED+GI +++ +KL +N
Sbjct: 96 MSRSMNASSLKRKRPESSSANGSLVDADRAVFNVIKSKEDMGIWTRDIKFETKLADTVVN 155
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++K+L++ +LIKE+ NIK KG KHYMAAEFEPSKE+TGG WY DG L++ELI LK C
Sbjct: 156 KSLKSLLSKKLIKEIVNIKNKGRKHYMAAEFEPSKEVTGGAWYVDGNLDKELIGVLKGLC 215
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
KII KVAT +GV+ QI ++L SMVLDNE++EVKS GL EYHS
Sbjct: 216 LKIINSKKVATVEGVYDFLTKSKVTTFDCTNQQIAEVLNSMVLDNEVIEVKSTGLGEYHS 275
Query: 539 IPVGEICYR 565
IP+G +CYR
Sbjct: 276 IPIGTVCYR 284
>XP_019235503.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana attenuata] OIT25732.1 hypothetical protein
A4A49_30765 [Nicotiana attenuata]
Length = 240
Score = 181 bits (458), Expect = 5e-54
Identities = 94/189 (49%), Positives = 129/189 (68%), Gaps = 2/189 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVTLG--DVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSRL ++ A+KRKR S T G D +R +L+ ++ K++LGI +AE+++ + LP ++
Sbjct: 1 MSRLGEAAAMKRKRPDLDSPTQGLPDAERVVLSLVKNKKNLGIWVAEVKKEANLPPTLVD 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++ L+ +LIK+V NI+ KG KHYMA EFEPS+ELTGG WY++G L++E I L+ TC
Sbjct: 61 KSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDTC 120
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
K+I LKVAT +G+H QI +IL SMVLDN I+EVKS GL EYHS
Sbjct: 121 LKVIELLKVATVEGIH--NFLKKRKVVECTSQQIAEILNSMVLDNGIIEVKSTGLGEYHS 178
Query: 539 IPVGEICYR 565
IPVG +CYR
Sbjct: 179 IPVGSVCYR 187
>XP_011080605.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Sesamum indicum]
Length = 239
Score = 180 bits (456), Expect = 9e-54
Identities = 92/187 (49%), Positives = 127/187 (67%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVTLGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLNKT 184
MSR + +LKRKR S L D +R IL +I+GK+DLGI ++++ +KL + +NK+
Sbjct: 1 MSRRPVNPSLKRKRPETDSPGLVDAERAILNSIKGKKDLGIWARDIKQETKLTDHVVNKS 60
Query: 185 IKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTCKK 364
+K+L+ +LIKEV NI+ KG KHYMA EFEPSKE++GGEWY DG L++ELI LK C +
Sbjct: 61 LKSLLAKKLIKEVVNIQNKGKKHYMAVEFEPSKEISGGEWYVDGNLDKELINVLKQLCFR 120
Query: 365 IIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHSIP 544
+ KVAT +GV+ Q+ +IL SMVLDN+++EVKS GL +YHSIP
Sbjct: 121 YLRTQKVATLEGVYNELKKNRVVTFDISNQQVSEILNSMVLDNDLIEVKSTGLGDYHSIP 180
Query: 545 VGEICYR 565
+G +CYR
Sbjct: 181 IGTVCYR 187
>XP_016475504.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana tabacum]
Length = 240
Score = 177 bits (450), Expect = 8e-53
Identities = 92/189 (48%), Positives = 128/189 (67%), Gaps = 2/189 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVTLG--DVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR +++ A+KRKR S T G D + +L+ ++ K++LGI +AE+++ + LP ++
Sbjct: 1 MSRSREAAAMKRKRPDLDSPTRGLPDAEHVVLSLVKNKKNLGIWVAEVKKEANLPPTLVD 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++ L+ +LIK+V NI+ KG KHYMA EFEPS+ELTGG WY++G L++E I L+ TC
Sbjct: 61 KSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDTC 120
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
K+I LKVAT +G+H QI +IL SMVLDN I+EVKS GL EYHS
Sbjct: 121 FKVIELLKVATVEGIH--NFLKKRKVVECTGQQIAEILNSMVLDNAIIEVKSTGLGEYHS 178
Query: 539 IPVGEICYR 565
IPVG +CYR
Sbjct: 179 IPVGSVCYR 187
>XP_009774782.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana sylvestris] XP_016481289.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana tabacum]
Length = 240
Score = 177 bits (450), Expect = 8e-53
Identities = 92/189 (48%), Positives = 127/189 (67%), Gaps = 2/189 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVTLG--DVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR ++ A+KRKR S T G D +R +L+ ++ K++LGI +AE+++ + LP ++
Sbjct: 1 MSRSREEAAMKRKRPDLDSPTQGLPDAERVVLSLVKNKKNLGIWVAEVKKEANLPPTLVD 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++ L+ +LIK+V NI+ KG KHYMA EFEPS+ELTGG WY++G L++E I L+ TC
Sbjct: 61 KSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDTC 120
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
K+I LKVAT +G+H QI +IL SMVLDN I+EVKS GL EYH
Sbjct: 121 LKVIELLKVATVEGIH--NFLKKRKVVECTSQQIAEILNSMVLDNAIIEVKSTGLGEYHP 178
Query: 539 IPVGEICYR 565
IPVG +CYR
Sbjct: 179 IPVGSVCYR 187
>XP_015872858.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ziziphus
jujuba]
Length = 238
Score = 177 bits (449), Expect = 1e-52
Identities = 90/190 (47%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVT--LGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSRLQ +ALKRKR +S + L + +R + I+ K+D+GI +++R + LP N +N
Sbjct: 1 MSRLQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVVN 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++K+L +LIKEV NI+ KG KHYMAAEFEPSKE++GG WY +G L+ E I+ LK C
Sbjct: 61 KSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQC 120
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
KII K +VAT +G+ QI +IL+++VLDN +++VKSNG+ E+ S
Sbjct: 121 AKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFDS 180
Query: 539 IPVGEICYRC 568
IPVG++CY+C
Sbjct: 181 IPVGKVCYKC 190
>XP_009625703.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana tomentosiformis]
Length = 240
Score = 176 bits (447), Expect = 2e-52
Identities = 92/189 (48%), Positives = 128/189 (67%), Gaps = 2/189 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVTLG--DVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR +++ A+KRKR S T G D + +L+ ++ K++LGI +AE+++ + LP ++
Sbjct: 1 MSRSREAAAMKRKRPDLDSPTRGLPDAECVVLSLVKNKKNLGIWVAEVKKEANLPPTLVD 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++ L+ +LIK+V NI+ KG KHYMA EFEPS+ELTGG WY++G L++E I L+ TC
Sbjct: 61 KSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDTC 120
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
K+I LKVAT +G+H QI +IL SMVLDN I+EVKS GL EYHS
Sbjct: 121 FKVIELLKVATVEGIH--NFLKKRKVVECTGQQIAEILNSMVLDNAIIEVKSTGLGEYHS 178
Query: 539 IPVGEICYR 565
IPVG +CYR
Sbjct: 179 IPVGSVCYR 187
>XP_009620517.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana tomentosiformis] XP_016511458.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana tabacum]
Length = 240
Score = 176 bits (446), Expect = 3e-52
Identities = 91/189 (48%), Positives = 126/189 (66%), Gaps = 2/189 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVTLG--DVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR +++ +KRKR S T G D +R +L+ ++ K +LGI + E+++ + LP ++
Sbjct: 1 MSRSREATTMKRKRPDLDSPTRGLPDAERVVLSLVKNKRNLGIWVVEVKKEANLPPTLVD 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++ L+ +LIK+V NI+ KG KHYMA EFEPS+ELTGG WY++G L++E I L+ TC
Sbjct: 61 KSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDTC 120
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
K+I LKVAT +G+H QI +IL SMVLDN I+EVKS GL EYHS
Sbjct: 121 FKVIELLKVATVEGIH--NFLKKRKVVECTSQQIAEILNSMVLDNAIIEVKSTGLGEYHS 178
Query: 539 IPVGEICYR 565
IPVG +CYR
Sbjct: 179 IPVGSVCYR 187
>XP_011081983.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Sesamum indicum]
Length = 239
Score = 175 bits (444), Expect = 6e-52
Identities = 92/187 (49%), Positives = 124/187 (66%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVTLGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLNKT 184
MSR S +LKRKR L D +R IL +I+GK+DLG ++++ +KL + +NK+
Sbjct: 1 MSRSLVSPSLKRKRPETGPPGLIDAERAILDSIKGKKDLGNWARDIKQETKLTDHVVNKS 60
Query: 185 IKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTCKK 364
+K+L+ +LIKEV NI+ KG KHYM+ EFEPSKE++GGEWY DG L++ELI LK C +
Sbjct: 61 LKSLLAKKLIKEVVNIQNKGKKHYMSVEFEPSKEISGGEWYVDGNLDKELINILKQLCLR 120
Query: 365 IIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHSIP 544
+ KVA +GVH Q+ +IL SMVLDN+I+EVKS GL +YHSIP
Sbjct: 121 YLRVQKVAILEGVHNDLKKNRVVTFEISCQQVGEILNSMVLDNDIIEVKSTGLGDYHSIP 180
Query: 545 VGEICYR 565
+G ICYR
Sbjct: 181 IGTICYR 187
>XP_002266428.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] XP_010654780.1 PREDICTED: DNA-directed RNA
polymerase III subunit RPC6-like [Vitis vinifera]
Length = 239
Score = 175 bits (444), Expect = 6e-52
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 2/190 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVT--LGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR Q ++LKRKR ++ + L D +R + I+ KED+GI +++R + LP N +
Sbjct: 1 MSRSQ-GLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++K L +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
K++ KLKVATA+G+ QI +IL+++VLDNEI+EV+S+G E+ S
Sbjct: 120 VKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179
Query: 539 IPVGEICYRC 568
IP+G +CYRC
Sbjct: 180 IPIGAVCYRC 189
>XP_003635403.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 174 bits (442), Expect = 1e-51
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 2/190 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVT--LGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR Q S +LKRKR ++ + L D +R + I+ KED+GI +++R + LP N +
Sbjct: 1 MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++K L +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
+++ KLKVATA+G+ QI +IL+++VLDNEI+EV+S+G E+ S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179
Query: 539 IPVGEICYRC 568
IP+G +CYRC
Sbjct: 180 IPIGAVCYRC 189
>XP_010647482.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Vitis
vinifera]
Length = 239
Score = 174 bits (442), Expect = 1e-51
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 2/190 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVT--LGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR Q S +LKRKR ++ + L D +R + I+ KED+GI +++R + LP N +
Sbjct: 1 MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++K L +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 119
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
+++ KLKVATA+G+ QI +IL+++VLDNEI+EV+S+G E+ S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179
Query: 539 IPVGEICYRC 568
IP+G +CYRC
Sbjct: 180 IPIGAVCYRC 189
>XP_016567954.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Capsicum annuum]
Length = 250
Score = 174 bits (441), Expect = 2e-51
Identities = 88/190 (46%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Frame = +2
Query: 2 EMSRLQDSMALKRKRGPQSSVTLG--DVDRNILATIQGKEDLGISIAELRRVSKLPANQL 175
+MSR ++ A+KRKR S T G D +R +L ++ K++LG+ +AE+++ + L +
Sbjct: 12 DMSRSSEAAAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIV 71
Query: 176 NKTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKST 355
+K++ +L+ +L+K+V NI+ KG KHYMA EFEPS++LTGG WY++GKL++E I L+ T
Sbjct: 72 DKSLTSLVKKKLVKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDT 131
Query: 356 CKKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYH 535
C K+I +KVATA+G+H Q+ +IL SMVLDN I+EVKS GL EYH
Sbjct: 132 CLKVIEMMKVATAEGIH--DFLKKRKVVECTSQQVAEILNSMVLDNAIIEVKSTGLGEYH 189
Query: 536 SIPVGEICYR 565
SI VG +CYR
Sbjct: 190 SIAVGSVCYR 199
>XP_016566434.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum] XP_016566435.1 PREDICTED: DNA-directed
RNA polymerase III subunit RPC6-like [Capsicum annuum]
XP_016566436.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC6-like [Capsicum annuum] XP_016566437.1
PREDICTED: DNA-directed RNA polymerase III subunit
RPC6-like [Capsicum annuum] XP_016566438.1 PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Capsicum annuum] XP_016566439.1 PREDICTED: DNA-directed
RNA polymerase III subunit RPC6-like [Capsicum annuum]
XP_016566441.1 PREDICTED: DNA-directed RNA polymerase
III subunit RPC6-like [Capsicum annuum] XP_016566442.1
PREDICTED: DNA-directed RNA polymerase III subunit
RPC6-like [Capsicum annuum]
Length = 240
Score = 174 bits (440), Expect = 2e-51
Identities = 89/189 (47%), Positives = 128/189 (67%), Gaps = 2/189 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVTLG--DVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR ++ A+KRKR S T G D +R +L ++ K++LG+ +AE+++ + L ++
Sbjct: 1 MSRSSEAAAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIVD 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++ +L+ +LIK+V NI+ KG KHYMA EFEPS++LTGG WY++GKL++E I L+ TC
Sbjct: 61 KSLTSLVKKKLIKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDTC 120
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
K+I +KVATA+G+H Q+ +IL SMVLDN I+EVKS GL EYHS
Sbjct: 121 LKVIEMMKVATAEGIH--DFLKKRKVVECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHS 178
Query: 539 IPVGEICYR 565
I VG +CYR
Sbjct: 179 IAVGSVCYR 187
>XP_016567955.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
isoform X2 [Capsicum annuum] XP_016567956.1 PREDICTED:
DNA-directed RNA polymerase III subunit rpc6-like
isoform X2 [Capsicum annuum]
Length = 238
Score = 173 bits (439), Expect = 3e-51
Identities = 88/189 (46%), Positives = 128/189 (67%), Gaps = 2/189 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVTLG--DVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR ++ A+KRKR S T G D +R +L ++ K++LG+ +AE+++ + L ++
Sbjct: 1 MSRSSEAAAMKRKRPNMDSPTQGLVDAERIVLDVVRSKKNLGVWVAEVKKEANLAPTIVD 60
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++ +L+ +L+K+V NI+ KG KHYMA EFEPS++LTGG WY++GKL++E I L+ TC
Sbjct: 61 KSLTSLVKKKLVKQVVNIQNKGRKHYMAVEFEPSEDLTGGAWYSEGKLDKEFITVLRDTC 120
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
K+I +KVATA+G+H Q+ +IL SMVLDN I+EVKS GL EYHS
Sbjct: 121 LKVIEMMKVATAEGIH--DFLKKRKVVECTSQQVAEILNSMVLDNAIIEVKSTGLGEYHS 178
Query: 539 IPVGEICYR 565
I VG +CYR
Sbjct: 179 IAVGSVCYR 187
>XP_009785680.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana sylvestris]
Length = 244
Score = 173 bits (438), Expect = 6e-51
Identities = 91/190 (47%), Positives = 129/190 (67%), Gaps = 2/190 (1%)
Frame = +2
Query: 2 EMSRLQDSMALKRKRGPQSSVTLG--DVDRNILATIQGKEDLGISIAELRRVSKLPANQL 175
+MSR +++ A+KRKR S T G D +R +L+ ++ K++LGI +AE+++ + LP +
Sbjct: 4 KMSRSREAAAMKRKRPDLDSPTQGLPDAERVVLSLVKNKKNLGIWVAEVKKEANLPPTLV 63
Query: 176 NKTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKST 355
+K++ L+ +LIK+V NI+ KG KHYMA EFE S+ELTGG WY++G L++E I L+ T
Sbjct: 64 DKSLTALVKKKLIKQVVNIQNKGKKHYMAVEFECSEELTGGSWYSEGNLDKEFITVLRDT 123
Query: 356 CKKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYH 535
C K+I LKVAT +G+H QI++IL SMVLDN I+EVKS L EYH
Sbjct: 124 CLKVIELLKVATVEGIH--NFLKKRKVVECTSQQIVEILNSMVLDNAIIEVKSTELGEYH 181
Query: 536 SIPVGEICYR 565
SIPVG +CYR
Sbjct: 182 SIPVGLVCYR 191
>CBI33284.3 unnamed protein product, partial [Vitis vinifera]
Length = 300
Score = 174 bits (442), Expect = 7e-51
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 2/190 (1%)
Frame = +2
Query: 5 MSRLQDSMALKRKRGPQSSVT--LGDVDRNILATIQGKEDLGISIAELRRVSKLPANQLN 178
MSR Q S +LKRKR ++ + L D +R + I+ KED+GI +++R + LP N +
Sbjct: 62 MSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 120
Query: 179 KTIKTLITGQLIKEVPNIKYKGGKHYMAAEFEPSKELTGGEWYADGKLNQELIEFLKSTC 358
K++K L +LIKEV NI+ KG KHYMA EFEPSKELTGG WY +G L+ E I+ LK TC
Sbjct: 121 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 180
Query: 359 KKIIIKLKVATAKGVHXXXXXXXXXXXXXXXXQILQILKSMVLDNEILEVKSNGLAEYHS 538
+++ KLKVATA+G+ QI +IL+++VLDNEI+EV+S+G E+ S
Sbjct: 181 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 240
Query: 539 IPVGEICYRC 568
IP+G +CYRC
Sbjct: 241 IPIGAVCYRC 250